Miyakogusa Predicted Gene
- Lj2g3v1119540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1119540.1 Non Chatacterized Hit- tr|I1N3S7|I1N3S7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26542
PE,38.65,5e-19,Ring finger,Zinc finger, RING-type; no description,Zinc
finger, RING/FYVE/PHD-type; seg,NULL; zf-RIN,CUFF.36283.1
(229 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15790.2 | Symbols: | RING/U-box superfamily protein | chr5:... 265 1e-71
AT5G15790.1 | Symbols: | RING/U-box superfamily protein | chr5:... 265 1e-71
AT5G38895.2 | Symbols: | RING/U-box superfamily protein | chr5:... 249 7e-67
AT5G38895.3 | Symbols: | RING/U-box superfamily protein | chr5:... 249 7e-67
AT5G38895.1 | Symbols: | RING/U-box superfamily protein | chr5:... 249 1e-66
AT3G02290.1 | Symbols: | RING/U-box superfamily protein | chr3:... 245 2e-65
AT3G02290.2 | Symbols: | RING/U-box superfamily protein | chr3:... 162 2e-40
AT5G41350.1 | Symbols: | RING/U-box superfamily protein | chr5:... 91 4e-19
AT4G00335.2 | Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-... 88 6e-18
AT4G00335.1 | Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-... 88 6e-18
AT4G00335.3 | Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-... 85 3e-17
AT4G23450.3 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 82 4e-16
AT4G23450.2 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 82 4e-16
AT4G23450.1 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 81 6e-16
AT4G14220.1 | Symbols: RHF1A | RING-H2 group F1A | chr4:8196012-... 63 2e-10
AT5G22000.3 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-... 56 2e-08
AT5G22000.1 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-... 56 2e-08
AT5G22000.2 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-... 56 3e-08
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 4e-07
AT5G37250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 5e-07
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 5e-07
AT5G37270.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 6e-07
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 50 1e-06
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 2e-06
AT5G37200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT5G37230.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 3e-06
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 4e-06
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 5e-06
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 48 5e-06
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 48 6e-06
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 7e-06
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 47 8e-06
>AT5G15790.2 | Symbols: | RING/U-box superfamily protein |
chr5:5149800-5150964 FORWARD LENGTH=232
Length = 232
Score = 265 bits (678), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/231 (58%), Positives = 160/231 (69%), Gaps = 5/231 (2%)
Query: 1 MGSVCCCLSFDDFEDYVNPNSPVYRNCACLSCLIQNVLNVYTSIFRRGEVHSLPSSIQGT 60
MG V C DDFEDY NP+S V R+C C CL+ N LN+Y S+FRRGE SLPSS+Q T
Sbjct: 1 MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQAT 60
Query: 61 -ASMTXXXXXXXXXXXXYRSPPRPLPYDAEPRYFRSQRDGLVSRRDKSSSHSNEETEPLR 119
S+ + S PRPLPYDA+PRYFRS+RD LVSRRDK SSHS+EE EPLR
Sbjct: 61 NVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLR 120
Query: 120 SDVEVDPESFN-SGDKWNG---CAGDDGSKECRSKSALKISSAKYTTGVGLIYASSEEED 175
SD +VD ESF+ G KW +G+D +E S + S +T +Y +S++ED
Sbjct: 121 SDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEGLYITSDDED 180
Query: 176 VCPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMLFDES 226
VCPTCLEEY +ENPKI+TKCSHHFHL CIYEWMERS+NCPVCGKVM F E+
Sbjct: 181 VCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231
>AT5G15790.1 | Symbols: | RING/U-box superfamily protein |
chr5:5149800-5150964 FORWARD LENGTH=232
Length = 232
Score = 265 bits (678), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/231 (58%), Positives = 160/231 (69%), Gaps = 5/231 (2%)
Query: 1 MGSVCCCLSFDDFEDYVNPNSPVYRNCACLSCLIQNVLNVYTSIFRRGEVHSLPSSIQGT 60
MG V C DDFEDY NP+S V R+C C CL+ N LN+Y S+FRRGE SLPSS+Q T
Sbjct: 1 MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQAT 60
Query: 61 -ASMTXXXXXXXXXXXXYRSPPRPLPYDAEPRYFRSQRDGLVSRRDKSSSHSNEETEPLR 119
S+ + S PRPLPYDA+PRYFRS+RD LVSRRDK SSHS+EE EPLR
Sbjct: 61 NVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLR 120
Query: 120 SDVEVDPESFN-SGDKWNG---CAGDDGSKECRSKSALKISSAKYTTGVGLIYASSEEED 175
SD +VD ESF+ G KW +G+D +E S + S +T +Y +S++ED
Sbjct: 121 SDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEGLYITSDDED 180
Query: 176 VCPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMLFDES 226
VCPTCLEEY +ENPKI+TKCSHHFHL CIYEWMERS+NCPVCGKVM F E+
Sbjct: 181 VCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231
>AT5G38895.2 | Symbols: | RING/U-box superfamily protein |
chr5:15571321-15573315 FORWARD LENGTH=296
Length = 296
Score = 249 bits (637), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 151/227 (66%), Gaps = 10/227 (4%)
Query: 1 MGSVCCCLSFDDFEDYVNPNSPVYRNCACLSCLIQNVLNVYTSIFRRGEVHSLPSSIQGT 60
MG+ CCC D FE YVNPN+ + RNC CL+C +Q+ +++Y S+F RG +H +PS+++
Sbjct: 76 MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 135
Query: 61 ASMTXXXXXXXXXXXXYRSPPRPLPYDAEPRYFRSQRDGLVSRRDKSSSHSNEETEPLRS 120
M Y SPP PLPYDA+PRYFR K SSHS EE+EPLR
Sbjct: 136 TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRFV---------KGSSHSGEESEPLRG 186
Query: 121 DVEVDPESF-NSGDKWNGCAGDDGSKECRSKSALKISSAKYTTGVGLIYASSEEEDVCPT 179
D E+ E+ + G KW+ +DGSKE +K + + +K G+ + YA S++ED+CPT
Sbjct: 187 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 246
Query: 180 CLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMLFDES 226
CL++YT ENPKI+TKCSHHFHL CIYEWMERS+ CPVCGKVM FDE+
Sbjct: 247 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDEN 293
>AT5G38895.3 | Symbols: | RING/U-box superfamily protein |
chr5:15571302-15573315 FORWARD LENGTH=326
Length = 326
Score = 249 bits (637), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 151/227 (66%), Gaps = 10/227 (4%)
Query: 1 MGSVCCCLSFDDFEDYVNPNSPVYRNCACLSCLIQNVLNVYTSIFRRGEVHSLPSSIQGT 60
MG+ CCC D FE YVNPN+ + RNC CL+C +Q+ +++Y S+F RG +H +PS+++
Sbjct: 106 MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 165
Query: 61 ASMTXXXXXXXXXXXXYRSPPRPLPYDAEPRYFRSQRDGLVSRRDKSSSHSNEETEPLRS 120
M Y SPP PLPYDA+PRYFR K SSHS EE+EPLR
Sbjct: 166 TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRFV---------KGSSHSGEESEPLRG 216
Query: 121 DVEVDPESF-NSGDKWNGCAGDDGSKECRSKSALKISSAKYTTGVGLIYASSEEEDVCPT 179
D E+ E+ + G KW+ +DGSKE +K + + +K G+ + YA S++ED+CPT
Sbjct: 217 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 276
Query: 180 CLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMLFDES 226
CL++YT ENPKI+TKCSHHFHL CIYEWMERS+ CPVCGKVM FDE+
Sbjct: 277 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDEN 323
>AT5G38895.1 | Symbols: | RING/U-box superfamily protein |
chr5:15572084-15573315 FORWARD LENGTH=221
Length = 221
Score = 249 bits (635), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 151/227 (66%), Gaps = 10/227 (4%)
Query: 1 MGSVCCCLSFDDFEDYVNPNSPVYRNCACLSCLIQNVLNVYTSIFRRGEVHSLPSSIQGT 60
MG+ CCC D FE YVNPN+ + RNC CL+C +Q+ +++Y S+F RG +H +PS+++
Sbjct: 1 MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 60
Query: 61 ASMTXXXXXXXXXXXXYRSPPRPLPYDAEPRYFRSQRDGLVSRRDKSSSHSNEETEPLRS 120
M Y SPP PLPYDA+PRYFR K SSHS EE+EPLR
Sbjct: 61 TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRFV---------KGSSHSGEESEPLRG 111
Query: 121 DVEVDPESF-NSGDKWNGCAGDDGSKECRSKSALKISSAKYTTGVGLIYASSEEEDVCPT 179
D E+ E+ + G KW+ +DGSKE +K + + +K G+ + YA S++ED+CPT
Sbjct: 112 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 171
Query: 180 CLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMLFDES 226
CL++YT ENPKI+TKCSHHFHL CIYEWMERS+ CPVCGKVM FDE+
Sbjct: 172 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDEN 218
>AT3G02290.1 | Symbols: | RING/U-box superfamily protein |
chr3:459385-460688 FORWARD LENGTH=231
Length = 231
Score = 245 bits (626), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/234 (57%), Positives = 165/234 (70%), Gaps = 12/234 (5%)
Query: 1 MGSVCCCLSFDDFEDYVNPNSPVYRNCACLSCLIQNVLNVYTSIFRRGEVHSLPSSIQGT 60
MG V C +D ++Y+NPNS VYRNC C+ CL N LN+Y S+FRRGE SLPSS+Q T
Sbjct: 1 MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60
Query: 61 ASMTXXXXXXXXXXXXYRSPPRPLPYDAEPRYFRSQRDGLVSRRDKSSSHSNEETEPLRS 120
AS+T +RS PRPLPYDA+PRYFRS LVSRR+K SSHS+EE EPLRS
Sbjct: 61 ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFRS----LVSRREKGSSHSHEEVEPLRS 116
Query: 121 DVEVDPESFNSGD-KW----NGCAGDDGSKECRSKSALKISSAKYTTGVG---LIYASSE 172
D + D ESF G KW + + D +E SKS+L+I ++ + + +Y SE
Sbjct: 117 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 176
Query: 173 EEDVCPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMLFDES 226
+EDVCPTCLEEYT+ENPKI+TKCSHHFHL CIYEWMERS+NCPVCGKVM F+E+
Sbjct: 177 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230
>AT3G02290.2 | Symbols: | RING/U-box superfamily protein |
chr3:459385-460228 FORWARD LENGTH=228
Length = 228
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 132/214 (61%), Gaps = 15/214 (7%)
Query: 1 MGSVCCCLSFDDFEDYVNPNSPVYRNCACLSCLIQNVLNVYTSIFRRGEVHSLPSSIQGT 60
MG V C +D ++Y+NPNS VYRNC C+ CL N LN+Y S+FRRGE SLPSS+Q T
Sbjct: 1 MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60
Query: 61 ASMTXXXXXXXXXXXXYRSPPRPLPYDAEPRYFRSQRDGLVSRRDKSSSHSNEETEPLRS 120
AS+T +RS PRPLPYDA+PRYFRS LVSRR+K SSHS+EE EPLRS
Sbjct: 61 ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFRS----LVSRREKGSSHSHEEVEPLRS 116
Query: 121 DVEVDPESFNSGD-KW----NGCAGDDGSKECRSKSALKISSAKYTTGVG---LIYASSE 172
D + D ESF G KW + + D +E SKS+L+I ++ + + +Y SE
Sbjct: 117 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 176
Query: 173 EEDVCPTCLEEYTTENPKIMTK-CSHHFHLGCIY 205
+EDVCPTCLE NP + CS H+ ++
Sbjct: 177 DEDVCPTCLE--GNNNPIQQSPFCSFSIHILLVF 208
>AT5G41350.1 | Symbols: | RING/U-box superfamily protein |
chr5:16542026-16543092 REVERSE LENGTH=212
Length = 212
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 167 IYASSEEEDVCPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMLFD 224
++ EEE+ CP CLEEY ENPK++ KC HHFHL CI EWMERS+ CPVC K M+FD
Sbjct: 151 VFIPIEEEEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVCNKEMVFD 208
>AT4G00335.2 | Symbols: RHB1A | RING-H2 finger B1A |
chr4:146866-147962 FORWARD LENGTH=190
Length = 190
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 141 DDGSKECRSKSALKISSAK---YTTGVGLIYASSEEEDVCPTCLEEYTTENPKIMTKCSH 197
D G +C++ ++ I S + ++ GL EEED CP C E+Y ENP++ TKC H
Sbjct: 100 DLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEH 159
Query: 198 HFHLGCIYEWMERSDNCPVCGKVMLFDE 225
FHL C+ EW+ERSD CP+C K ++FD+
Sbjct: 160 EFHLSCLLEWIERSDRCPICDKEVVFDD 187
>AT4G00335.1 | Symbols: RHB1A | RING-H2 finger B1A |
chr4:146866-147962 FORWARD LENGTH=190
Length = 190
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 141 DDGSKECRSKSALKISSAK---YTTGVGLIYASSEEEDVCPTCLEEYTTENPKIMTKCSH 197
D G +C++ ++ I S + ++ GL EEED CP C E+Y ENP++ TKC H
Sbjct: 100 DLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEH 159
Query: 198 HFHLGCIYEWMERSDNCPVCGKVMLFDE 225
FHL C+ EW+ERSD CP+C K ++FD+
Sbjct: 160 EFHLSCLLEWIERSDRCPICDKEVVFDD 187
>AT4G00335.3 | Symbols: RHB1A | RING-H2 finger B1A |
chr4:146866-147957 FORWARD LENGTH=189
Length = 189
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 141 DDGSKECRSKSALKISSAK---YTTGVGLIYASSEEEDVCPTCLEEYTTENPKIMTKCSH 197
D G +C++ ++ I S + ++ GL EEED CP C E+Y ENP++ TKC H
Sbjct: 100 DLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEH 159
Query: 198 HFHLGCIYEWMERSDNCPVCGKVML 222
FHL C+ EW+ERSD CP+C KV L
Sbjct: 160 EFHLSCLLEWIERSDRCPICDKVKL 184
>AT4G23450.3 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12242190 REVERSE LENGTH=208
Length = 208
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 90 PRYFRSQRDGLVSRRDKSSSHSNEETEPLRSDVEVDPESFNSGDKWNGCAGDDGSKECRS 149
P R+ + L R SS SN + PL + + + N G+ S
Sbjct: 66 PESSRTIDEHLPLSRATPSSLSNAYSSPLSPPIPLAITNINLQTSPPKLPRTQGNSSEAS 125
Query: 150 KSALKISSAKYT------TGVGLIYASSEEEDVCPTCLEEYTTENPKIMTKCSHHFHLGC 203
++ K T T L E D CP CLEEY +NPK++TKC H FHL C
Sbjct: 126 PGLTQVVPEKKTWHVDDLTDFELKKQYREAIDECPICLEEYEIDNPKLLTKCGHDFHLAC 185
Query: 204 IYEWMERSDNCPVCGKVMLFDES 226
I WMERS+ CPVC K ++ ES
Sbjct: 186 ILAWMERSEACPVCDKELVLTES 208
>AT4G23450.2 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12242190 REVERSE LENGTH=208
Length = 208
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 90 PRYFRSQRDGLVSRRDKSSSHSNEETEPLRSDVEVDPESFNSGDKWNGCAGDDGSKECRS 149
P R+ + L R SS SN + PL + + + N G+ S
Sbjct: 66 PESSRTIDEHLPLSRATPSSLSNAYSSPLSPPIPLAITNINLQTSPPKLPRTQGNSSEAS 125
Query: 150 KSALKISSAKYT------TGVGLIYASSEEEDVCPTCLEEYTTENPKIMTKCSHHFHLGC 203
++ K T T L E D CP CLEEY +NPK++TKC H FHL C
Sbjct: 126 PGLTQVVPEKKTWHVDDLTDFELKKQYREAIDECPICLEEYEIDNPKLLTKCGHDFHLAC 185
Query: 204 IYEWMERSDNCPVCGKVMLFDES 226
I WMERS+ CPVC K ++ ES
Sbjct: 186 ILAWMERSEACPVCDKELVLTES 208
>AT4G23450.1 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12241837 REVERSE LENGTH=153
Length = 153
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 90 PRYFRSQRDGLVSRRDKSSSHSNEETEPLRSDVEVDPESFNSGDKWNGCAGDDGSKECRS 149
P R+ + L R SS SN + PL + + + N G+ S
Sbjct: 11 PESSRTIDEHLPLSRATPSSLSNAYSSPLSPPIPLAITNINLQTSPPKLPRTQGNSSEAS 70
Query: 150 KSALKISSAKYT------TGVGLIYASSEEEDVCPTCLEEYTTENPKIMTKCSHHFHLGC 203
++ K T T L E D CP CLEEY +NPK++TKC H FHL C
Sbjct: 71 PGLTQVVPEKKTWHVDDLTDFELKKQYREAIDECPICLEEYEIDNPKLLTKCGHDFHLAC 130
Query: 204 IYEWMERSDNCPVCGKVMLFDES 226
I WMERS+ CPVC K ++ ES
Sbjct: 131 ILAWMERSEACPVCDKELVLTES 153
>AT4G14220.1 | Symbols: RHF1A | RING-H2 group F1A |
chr4:8196012-8198240 FORWARD LENGTH=371
Length = 371
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 165 GLIYASSEE---EDVCPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVM 221
L+ AS ++ +D C CLE +T ++P +T C H +HL CI EW +RS CP+C ++
Sbjct: 31 ALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLF 90
Query: 222 LF 223
+
Sbjct: 91 VL 92
>AT5G22000.3 | Symbols: RHF2A | RING-H2 group F2A |
chr5:7277436-7279553 FORWARD LENGTH=375
Length = 375
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 142 DGSKECRSKSALKISSAKYTTGVGLIYASSEEEDVCPTCLEEYTTENPKIMTKCSHHFHL 201
+G+ E + S+A + G G+ A +D C CLE + +P +T C H +HL
Sbjct: 2 EGAGETTTSEGHLTSAAAFVEG-GIQDAC---DDACSICLESFCESDPSTLTSCKHEYHL 57
Query: 202 GCIYEWMERSDNCPVCGKVMLFDEST 227
CI EW +RS CP+C + + + T
Sbjct: 58 QCILEWCQRSSQCPMCWQSISLKDPT 83
>AT5G22000.1 | Symbols: RHF2A | RING-H2 group F2A |
chr5:7277436-7279553 FORWARD LENGTH=375
Length = 375
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 142 DGSKECRSKSALKISSAKYTTGVGLIYASSEEEDVCPTCLEEYTTENPKIMTKCSHHFHL 201
+G+ E + S+A + G G+ A +D C CLE + +P +T C H +HL
Sbjct: 2 EGAGETTTSEGHLTSAAAFVEG-GIQDAC---DDACSICLESFCESDPSTLTSCKHEYHL 57
Query: 202 GCIYEWMERSDNCPVCGKVMLFDEST 227
CI EW +RS CP+C + + + T
Sbjct: 58 QCILEWCQRSSQCPMCWQSISLKDPT 83
>AT5G22000.2 | Symbols: RHF2A | RING-H2 group F2A |
chr5:7277436-7279553 FORWARD LENGTH=375
Length = 375
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 174 EDVCPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMLFDEST 227
+D C CLE + +P +T C H +HL CI EW +RS CP+C + + + T
Sbjct: 30 DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPT 83
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 142 DGSKECRSKSALKISSAKYTTGVGLIYASSEEEDVCPTCLEEYT-TENPKIMTKCSHHFH 200
DG E KS I+ KY +G G + S C CL E+ E+ +++ KC+H FH
Sbjct: 115 DGLNESMIKS---ITVYKYKSGDGFVDGSD-----CSVCLSEFEENESLRLLPKCNHAFH 166
Query: 201 LGCIYEWMERSDNCPVC 217
L CI W++ NCP+C
Sbjct: 167 LPCIDTWLKSHSNCPLC 183
>AT5G37250.1 | Symbols: | RING/U-box superfamily protein |
chr5:14750393-14750971 FORWARD LENGTH=192
Length = 192
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 172 EEEDVCPTCLEEYTT---ENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKV 220
EEE C CLE+++ +N ++ C H FH CI+EW++R +CP+C +V
Sbjct: 132 EEETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCRRV 183
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 155 ISSAKYTTGVGLIYASSEEEDVCPTCLEEYTT-ENPKIMTKCSHHFHLGCIYEWMERSDN 213
I+ Y G GLI E CP CL E+ E+ +++ KC+H FH+ CI W+ N
Sbjct: 160 ITICNYKRGDGLI-----ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTN 214
Query: 214 CPVC--GKVML 222
CP+C G M+
Sbjct: 215 CPLCRAGIAMI 225
>AT5G37270.1 | Symbols: | RING/U-box superfamily protein |
chr5:14757933-14758559 REVERSE LENGTH=208
Length = 208
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 172 EEEDVCPTCLEEYTT---ENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKV 220
EEE C CLE+++ +N ++ C H FH CI+EW++R +CP+C +V
Sbjct: 148 EEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCRRV 199
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 160 YTTGVGLIYASSEEEDVCPTCLEEYTTENP-KIMTKCSHHFHLGCIYEWMERSDNCPVC 217
Y T +GL + S+ C CL E+T E+ +++ KCSH FH+ CI W+ + CP+C
Sbjct: 109 YKTMIGLRHDLSD----CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLC 163
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 150 KSALK-ISSAKYTTGVGLIYASSEEEDVCPTCLEEYTT-ENPKIMTKCSHHFHLGCIYEW 207
+SA+ I+ + G G+I + C CL E+ E+ +++ KCSH FHL CI W
Sbjct: 112 RSAINSITVVGFKKGEGIIDGTE-----CSVCLNEFEEDESLRLLPKCSHAFHLNCIDTW 166
Query: 208 MERSDNCPVC-GKVMLFDE 225
+ NCP+C V+L E
Sbjct: 167 LLSHKNCPLCRAPVLLITE 185
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 118 LRSDVEVDPESFNSGDKWNGCAGDDGSKECRSKSALK-ISSAKYTTGVGLIYASSEEEDV 176
LRS+ + D E W G K A++ + +++ GL ++
Sbjct: 69 LRSETDSDGERIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGL-----KQGLE 123
Query: 177 CPTCLEEYT-TENPKIMTKCSHHFHLGCIYEWMERSDNCPVC 217
C CL ++ E +++ KC H FH+GCI +W+E+ CP+C
Sbjct: 124 CSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLC 165
>AT5G37200.1 | Symbols: | RING/U-box superfamily protein |
chr5:14727832-14728485 FORWARD LENGTH=217
Length = 217
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 172 EEEDVCPTCLEEYTTENPKIMT--KCSHHFHLGCIYEWMERSDNCPVCGKV 220
EE++ C C+E+++ + I+ C H FH GC++EW+ ++CP+C KV
Sbjct: 154 EEDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLCRKV 204
>AT5G37230.1 | Symbols: | RING/U-box superfamily protein |
chr5:14735154-14735780 FORWARD LENGTH=208
Length = 208
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 172 EEEDVCPTCLEEYTT---ENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKV 220
EEE C C+E+++ +N ++ C H FH CI++W++R +CP+C +V
Sbjct: 148 EEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLCRRV 199
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 177 CPTCLEEY-TTENPKIMTKCSHHFHLGCIYEWMERSDNCPVC 217
C CL ++ + E +++ KC H FH+GCI +W+E+ CP+C
Sbjct: 123 CSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLC 164
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 176 VCPTCLEEYTT-ENPKIMTKCSHHFHLGCIYEWMERSDNCPVC 217
+CP CL EY + E + M +C H FH+ CI EW++ +CPVC
Sbjct: 252 ICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVC 294
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 170 SSEEEDV-CPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVML 222
S EE+D C CLE++ + ++T C H FH CI W++ CPVC V+L
Sbjct: 164 SGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVIL 217
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 170 SSEEEDV-CPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVML 222
S EE+D C CLE++ + ++T C H FH CI W++ CPVC V+L
Sbjct: 136 SGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVIL 189
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 177 CPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMLFDES 226
C C +EY ++ +C H FH+ C+ +W+ R ++CPVC K M +++S
Sbjct: 319 CIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVC-KTMAYNKS 367
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 107 SSSHSNEETE--PLRSDVEVDPESFNSGDKWNGCAGDDGSKECRSKSALKISSAKYTTGV 164
++S S EE P+ +DPE NGC+ + S SA K+ + +
Sbjct: 154 TTSMSEEEINALPVHKYKVLDPE--------NGCSL--AKQASTSSSAEKMLDSANESKK 203
Query: 165 GLIYASSEEEDVCPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVC 217
G +E+E C CLE+ T C H FH GCI W+ + CPVC
Sbjct: 204 G-----TEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVC 251