Miyakogusa Predicted Gene

Lj2g3v1106430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1106430.1 Non Chatacterized Hit- tr|I1LWW8|I1LWW8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,70.97,2e-17,seg,NULL,NODE_55472_length_773_cov_55.467010.path1.1
         (85 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G30380.2 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    74   2e-14
AT3G30380.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    61   2e-10
AT1G13610.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    45   7e-06
AT1G13610.2 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    45   8e-06

>AT3G30380.2 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:11974424-11976571 FORWARD LENGTH=377
          Length = 377

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 12/94 (12%)

Query: 2   DVRENSR-SIDYKEKPSATSDQKEK-------SRANIXXXXXXXXXXXXPEKAYNGSDM- 52
           D+RE +R S D ++K   ++DQ+E        +RA++             EK  N ++  
Sbjct: 282 DIREPARPSTDQRDKSRTSTDQREMPKLSTDIARASVDKRERTRRSVDGTEKPSNSAEQQ 341

Query: 53  ---PEKARNSIDRFGEMVRSVGLCNIDCFRPTAT 83
              PEK RNSIDRFGEM+RSVG CNIDCF+PTAT
Sbjct: 342 LVQPEKGRNSIDRFGEMIRSVGFCNIDCFKPTAT 375


>AT3G30380.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:11974424-11976571 FORWARD LENGTH=399
          Length = 399

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 34/116 (29%)

Query: 2   DVRENSR-SIDYKEKPSATSDQKEK-------SRANIXXXXXXXXXXXXPEKAYNGSDM- 52
           D+RE +R S D ++K   ++DQ+E        +RA++             EK  N ++  
Sbjct: 282 DIREPARPSTDQRDKSRTSTDQREMPKLSTDIARASVDKRERTRRSVDGTEKPSNSAEQQ 341

Query: 53  ---PEKARNSIDR----------------------FGEMVRSVGLCNIDCFRPTAT 83
              PEK RNSIDR                      FGEM+RSVG CNIDCF+PTAT
Sbjct: 342 LVQPEKGRNSIDRYISQSFYDVLMIMLLMIMYDNRFGEMIRSVGFCNIDCFKPTAT 397


>AT1G13610.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr1:4664008-4665975 REVERSE LENGTH=358
          Length = 358

 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 18/26 (69%), Positives = 22/26 (84%)

Query: 54  EKARNSIDRFGEMVRSVGLCNIDCFR 79
           ++ARNS DR GEMVRSV LCN+DC +
Sbjct: 327 DRARNSFDRLGEMVRSVRLCNVDCVK 352


>AT1G13610.2 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr1:4664008-4665680 REVERSE LENGTH=258
          Length = 258

 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 18/26 (69%), Positives = 22/26 (84%)

Query: 54  EKARNSIDRFGEMVRSVGLCNIDCFR 79
           ++ARNS DR GEMVRSV LCN+DC +
Sbjct: 227 DRARNSFDRLGEMVRSVRLCNVDCVK 252