Miyakogusa Predicted Gene

Lj2g3v1102950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1102950.1 tr|B2KZH0|B2KZH0_PICAB Quartet 3 (Fragment)
OS=Picea abies GN=QRT3 PE=2
SV=1,74.51,0.00000000000004,seg,NULL,CUFF.36342.1
         (204 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G20050.2 | Symbols: QRT3 | Pectin lyase-like superfamily prot...   258   2e-69
AT4G20050.1 | Symbols: QRT3 | Pectin lyase-like superfamily prot...   258   2e-69
AT4G20040.1 | Symbols:  | Pectin lyase-like superfamily protein ...   177   4e-45

>AT4G20050.2 | Symbols: QRT3 | Pectin lyase-like superfamily protein
           | chr4:10849911-10852090 REVERSE LENGTH=481
          Length = 481

 Score =  258 bits (658), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/203 (64%), Positives = 151/203 (74%), Gaps = 1/203 (0%)

Query: 1   MVTGQANAFSGVHCYNKATFFGGTGIYLKLGGLTQTRIVNSYMDYTSIVAEDPVQLHISS 60
           MV+GQAN  SGVHCYNKAT FGGTGIYL+L GLTQ RIVNSY+DYT IVAEDPVQL IS 
Sbjct: 279 MVSGQANLLSGVHCYNKATGFGGTGIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISG 338

Query: 61  SFFLGDANIVLKSDKXXXXXXXXXDNMFSGSGNGVQIVKLDQSNGPFKQVEQVFVARNVV 120
           +FFLGDA I+LKS           DNMFSGSG+GVQIV+LDQ N  F  V QV V RN V
Sbjct: 339 TFFLGDAFILLKSIAGYIRGVSIVDNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSV 398

Query: 121 KGMNLKATTATMSVNGNGNLWIADFNKILLFPNLIKHVQYSLSAT-GSTFPNHAIRNVSE 179
            GM  K+T A  SV+GNG  W  DFN +LLFP+LI HVQY+L A+    FP HA+RNVS+
Sbjct: 399 NGMVEKSTVARGSVDGNGTSWTVDFNPVLLFPDLINHVQYTLVASEAGVFPLHALRNVSD 458

Query: 180 NRVVIETDKTVTAKVFVTVDQSM 202
           NRVV+ET+  VT  V+VTV+Q +
Sbjct: 459 NRVVVETNAPVTGTVYVTVNQGV 481


>AT4G20050.1 | Symbols: QRT3 | Pectin lyase-like superfamily protein
           | chr4:10849911-10852090 REVERSE LENGTH=481
          Length = 481

 Score =  258 bits (658), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/203 (64%), Positives = 151/203 (74%), Gaps = 1/203 (0%)

Query: 1   MVTGQANAFSGVHCYNKATFFGGTGIYLKLGGLTQTRIVNSYMDYTSIVAEDPVQLHISS 60
           MV+GQAN  SGVHCYNKAT FGGTGIYL+L GLTQ RIVNSY+DYT IVAEDPVQL IS 
Sbjct: 279 MVSGQANLLSGVHCYNKATGFGGTGIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISG 338

Query: 61  SFFLGDANIVLKSDKXXXXXXXXXDNMFSGSGNGVQIVKLDQSNGPFKQVEQVFVARNVV 120
           +FFLGDA I+LKS           DNMFSGSG+GVQIV+LDQ N  F  V QV V RN V
Sbjct: 339 TFFLGDAFILLKSIAGYIRGVSIVDNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSV 398

Query: 121 KGMNLKATTATMSVNGNGNLWIADFNKILLFPNLIKHVQYSLSAT-GSTFPNHAIRNVSE 179
            GM  K+T A  SV+GNG  W  DFN +LLFP+LI HVQY+L A+    FP HA+RNVS+
Sbjct: 399 NGMVEKSTVARGSVDGNGTSWTVDFNPVLLFPDLINHVQYTLVASEAGVFPLHALRNVSD 458

Query: 180 NRVVIETDKTVTAKVFVTVDQSM 202
           NRVV+ET+  VT  V+VTV+Q +
Sbjct: 459 NRVVVETNAPVTGTVYVTVNQGV 481


>AT4G20040.1 | Symbols:  | Pectin lyase-like superfamily protein |
           chr4:10847348-10848963 REVERSE LENGTH=483
          Length = 483

 Score =  177 bits (450), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 96/200 (48%), Positives = 125/200 (62%), Gaps = 7/200 (3%)

Query: 2   VTGQANAFSGVHCYNKATFFGGTGIYLKLGGLTQTRIVNSYMDYTSIVAEDPVQLHISSS 61
           + G AN  +GVHCYNKAT+FGG GI +K      TRI N Y+DYT IV EDPV +H++++
Sbjct: 290 LNGGANMVTGVHCYNKATWFGGIGILVKS---HLTRIDNCYLDYTGIVIEDPVHVHVTNA 346

Query: 62  FFLGDANIVLKSDKXXXXXXXXXDNMFSGSG-NGVQIVKLDQSNGPFKQVEQVFVARNVV 120
            FLGDANIVL+S           +NMFSG+  N   IVKL+   G F  + QV + +N  
Sbjct: 347 LFLGDANIVLRSVHGKISGVNIVNNMFSGTAKNNFPIVKLE---GEFHDINQVVIDQNNA 403

Query: 121 KGMNLKATTATMSVNGNGNLWIADFNKILLFPNLIKHVQYSLSATGSTFPNHAIRNVSEN 180
           +GM LK+TT    V+ NG  WIADF+ +L+FPN I H Q+S  A     P +A+ NVS N
Sbjct: 404 EGMMLKSTTGKAMVSANGTRWIADFSPVLVFPNRINHYQHSFFAQSGQIPANAVTNVSNN 463

Query: 181 RVVIETDKTVTAKVFVTVDQ 200
            VV+ETD+ VT  V +   Q
Sbjct: 464 MVVVETDRAVTGTVSIIAYQ 483