Miyakogusa Predicted Gene
- Lj2g3v1102920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1102920.1 Non Chatacterized Hit- tr|K4BXT9|K4BXT9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,48.51,2e-19,seg,NULL,CUFF.36227.1
(132 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G26355.1 | Symbols: SP1L1 | SPIRAL1-like1 | chr1:9117950-9118... 83 5e-17
AT1G69230.2 | Symbols: SP1L2 | SPIRAL1-like2 | chr1:26026543-260... 77 3e-15
AT1G69230.1 | Symbols: SP1L2 | SPIRAL1-like2 | chr1:26026543-260... 77 3e-15
AT2G03680.2 | Symbols: SPR1, SKU6 | spiral1 | chr2:1121398-11218... 73 6e-14
AT2G03680.1 | Symbols: SPR1, SKU6 | spiral1 | chr2:1121398-11218... 73 6e-14
AT5G15600.1 | Symbols: SP1L4 | SPIRAL1-like4 | chr5:5078405-5078... 65 1e-11
AT3G02180.2 | Symbols: SP1L3 | SPIRAL1-like3 | chr3:404989-40545... 58 2e-09
AT3G02180.1 | Symbols: SP1L3 | SPIRAL1-like3 | chr3:404989-40545... 58 2e-09
>AT1G26355.1 | Symbols: SP1L1 | SPIRAL1-like1 | chr1:9117950-9118611
REVERSE LENGTH=113
Length = 113
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 63/115 (54%), Gaps = 19/115 (16%)
Query: 1 MGRGASSGGGQNSLGYLFGGRETAASNIQGGRAQNADVAPPPVNGGRAQNADVTNNQVEP 60
MGRG S GGGQ+SLGYLFG E I A +++ P +AD + V
Sbjct: 1 MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLP--------ISADPSPKHVA- 51
Query: 61 VIGGRALNAGAASPPIDKEIPAGVPGCLKNNYHRADGQNCGNFLTDRPSTKVHAA 115
A + + K+IPAG+ NNY RADGQN GNFLTDRPSTKVHAA
Sbjct: 52 ----------AQTVNVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAA 96
>AT1G69230.2 | Symbols: SP1L2 | SPIRAL1-like2 |
chr1:26026543-26027085 REVERSE LENGTH=110
Length = 110
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 63/118 (53%), Gaps = 27/118 (22%)
Query: 1 MGRGASSGGGQNSLGYLFGGRET---AASNIQGGRAQNADVAPPPVNGGRAQNADVTNNQ 57
MGRG S+GGGQ+SLGYLFG E AA N +++ APP N
Sbjct: 1 MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPP--------TQAAAANA 52
Query: 58 VEPVIGGRALNAGAASPPIDKEIPAGVPGCLKNNYHRADGQNCGNFLTDRPSTKVHAA 115
V+ + K++PAG+ NNY RA+GQN GNF+TDRPSTKVH+A
Sbjct: 53 VDSI----------------KQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSA 94
>AT1G69230.1 | Symbols: SP1L2 | SPIRAL1-like2 |
chr1:26026543-26027085 REVERSE LENGTH=110
Length = 110
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 63/118 (53%), Gaps = 27/118 (22%)
Query: 1 MGRGASSGGGQNSLGYLFGGRET---AASNIQGGRAQNADVAPPPVNGGRAQNADVTNNQ 57
MGRG S+GGGQ+SLGYLFG E AA N +++ APP N
Sbjct: 1 MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPP--------TQAAAANA 52
Query: 58 VEPVIGGRALNAGAASPPIDKEIPAGVPGCLKNNYHRADGQNCGNFLTDRPSTKVHAA 115
V+ + K++PAG+ NNY RA+GQN GNF+TDRPSTKVH+A
Sbjct: 53 VDSI----------------KQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSA 94
>AT2G03680.2 | Symbols: SPR1, SKU6 | spiral1 | chr2:1121398-1121850
FORWARD LENGTH=119
Length = 119
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 62/118 (52%), Gaps = 17/118 (14%)
Query: 1 MGRGASSGGGQNSLGYLFGGRETAASNIQGGRAQNADV---APPPVNGGRAQNADVTNNQ 57
MGRG S GGGQ+SL YLFGG A + R + PPV A
Sbjct: 1 MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60
Query: 58 VEPVIGGRALNAGAASPPIDKEIPAGVPGCLKNNYHRADGQNCGNFLTDRPSTKVHAA 115
VEP ++K+IPAG+ + NNY RA+GQN GNFLTDRPSTKVHAA
Sbjct: 61 VEPA-------------ELNKQIPAGIKTPV-NNYARAEGQNTGNFLTDRPSTKVHAA 104
>AT2G03680.1 | Symbols: SPR1, SKU6 | spiral1 | chr2:1121398-1121850
FORWARD LENGTH=119
Length = 119
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 62/118 (52%), Gaps = 17/118 (14%)
Query: 1 MGRGASSGGGQNSLGYLFGGRETAASNIQGGRAQNADV---APPPVNGGRAQNADVTNNQ 57
MGRG S GGGQ+SL YLFGG A + R + PPV A
Sbjct: 1 MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60
Query: 58 VEPVIGGRALNAGAASPPIDKEIPAGVPGCLKNNYHRADGQNCGNFLTDRPSTKVHAA 115
VEP ++K+IPAG+ + NNY RA+GQN GNFLTDRPSTKVHAA
Sbjct: 61 VEPA-------------ELNKQIPAGIKTPV-NNYARAEGQNTGNFLTDRPSTKVHAA 104
>AT5G15600.1 | Symbols: SP1L4 | SPIRAL1-like4 | chr5:5078405-5078863
FORWARD LENGTH=127
Length = 127
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 58/117 (49%), Gaps = 18/117 (15%)
Query: 3 RGASSGGGQNSLGYLFGGRETAASNIQGGRAQNADVAPPPVNGGRAQNADVTNNQVEPVI 62
RG +SGGG++SLGYLFG E+ P N T
Sbjct: 5 RGVNSGGGESSLGYLFGSGESVPK-------------PNKPNAKTGFTTTTTTTTTTDGA 51
Query: 63 GGRALNAGAASPPIDK----EIPAGVPGCLKNNYHRADGQNCGNFLTDRPSTKVHAA 115
GGR + DK E AGV G NNY+R+DGQNCGNFLT+RPSTKVHAA
Sbjct: 52 GGRPKTTTTTTTTGDKNKTEENSAGVRGS-PNNYYRSDGQNCGNFLTERPSTKVHAA 107
>AT3G02180.2 | Symbols: SP1L3 | SPIRAL1-like3 | chr3:404989-405457
FORWARD LENGTH=122
Length = 122
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Query: 77 DKEIPAGVPGCLKNNYHRADGQNCGNFLTDRPSTKVHAA 115
+K+ AGV G NNY R++GQNCGNFLTDRPSTKVHAA
Sbjct: 63 NKKTSAGVRGS-PNNYFRSEGQNCGNFLTDRPSTKVHAA 100
>AT3G02180.1 | Symbols: SP1L3 | SPIRAL1-like3 | chr3:404989-405457
FORWARD LENGTH=122
Length = 122
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Query: 77 DKEIPAGVPGCLKNNYHRADGQNCGNFLTDRPSTKVHAA 115
+K+ AGV G NNY R++GQNCGNFLTDRPSTKVHAA
Sbjct: 63 NKKTSAGVRGS-PNNYFRSEGQNCGNFLTDRPSTKVHAA 100