Miyakogusa Predicted Gene

Lj2g3v1079560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1079560.1 Non Chatacterized Hit- tr|I3SWG0|I3SWG0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.94,0,no
description,NULL; BIOTINYL_LIPOYL,Biotin/lipoyl attachment; BCCP:
acetyl-CoA carboxylase, biotin ,CUFF.36202.1
         (284 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15530.1 | Symbols: BCCP2, CAC1-B | biotin carboxyl carrier p...   125   2e-29
AT5G16390.1 | Symbols: CAC1, CAC1A, BCCP, BCCP1 | chloroplastic ...   115   3e-26
AT5G16390.2 | Symbols: CAC1, CAC1A, BCCP, BCCP1, CAC1-A, BCCP-1 ...    80   2e-15

>AT5G15530.1 | Symbols: BCCP2, CAC1-B | biotin carboxyl carrier
           protein 2 | chr5:5038955-5040437 FORWARD LENGTH=255
          Length = 255

 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 59/80 (73%), Positives = 64/80 (80%)

Query: 205 SSHPPLKCPMAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADQSGTITE 264
           SSHPPLK PMAGTFYRSP PGEPPF            +CIIEAMKLMNEIEA++SGTI E
Sbjct: 176 SSHPPLKSPMAGTFYRSPGPGEPPFVKVGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIME 235

Query: 265 IVAEDGKPVSVDAPLFVIAP 284
           ++AEDGKPVSVD PLFVIAP
Sbjct: 236 LLAEDGKPVSVDTPLFVIAP 255



 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 12/91 (13%)

Query: 61  SVQKLQAQRNEAATVGNSNSAPLPVNVASSKEKEDYNGSVSCGTVADASSISTFMAQVSD 120
           +  +L+A  NE      SNS P+            Y    +   V + + +S FMA+VS 
Sbjct: 48  AFWRLRATTNEVV----SNSTPM--------TNGGYMNGKAKTNVPEPAELSEFMAKVSG 95

Query: 121 LVKLVDSRDIVELQLKQSDCELMIRKREALH 151
           L+KLVDS+DIVEL+LKQ DCE++IRK+EAL 
Sbjct: 96  LLKLVDSKDIVELELKQLDCEIVIRKKEALQ 126


>AT5G16390.1 | Symbols: CAC1, CAC1A, BCCP, BCCP1 | chloroplastic
           acetylcoenzyme A carboxylase 1 | chr5:5361098-5363020
           REVERSE LENGTH=280
          Length = 280

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 59/77 (76%)

Query: 208 PPLKCPMAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADQSGTITEIVA 267
           P +K PMAGTFYRSPAPGEPPF            +CI+EAMKLMNEIE+D +GT+ +IVA
Sbjct: 204 PTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVA 263

Query: 268 EDGKPVSVDAPLFVIAP 284
           EDGKPVS+D PLFV+ P
Sbjct: 264 EDGKPVSLDTPLFVVQP 280



 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/90 (53%), Positives = 62/90 (68%), Gaps = 6/90 (6%)

Query: 65  LQAQRNEAATVGNSNSAPLPVNVASSKEKEDYNG----SVSCGTVADASSISTFMAQVSD 120
           ++AQ N+ +T  +SN+A   V+  SS E ++ N     S S   +A   SIS F+ QV+ 
Sbjct: 60  VKAQSNKVSTGASSNAAK--VDGPSSAEGKEKNSLKESSASSPELATEESISEFLTQVTT 117

Query: 121 LVKLVDSRDIVELQLKQSDCELMIRKREAL 150
           LVKLVDSRDIVELQLKQ DCEL+IRK+EAL
Sbjct: 118 LVKLVDSRDIVELQLKQLDCELVIRKKEAL 147


>AT5G16390.2 | Symbols: CAC1, CAC1A, BCCP, BCCP1, CAC1-A, BCCP-1 |
           chloroplastic acetylcoenzyme A carboxylase 1 |
           chr5:5361554-5363020 REVERSE LENGTH=254
          Length = 254

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/90 (53%), Positives = 62/90 (68%), Gaps = 6/90 (6%)

Query: 65  LQAQRNEAATVGNSNSAPLPVNVASSKEKEDYNG----SVSCGTVADASSISTFMAQVSD 120
           ++AQ N+ +T  +SN+A   V+  SS E ++ N     S S   +A   SIS F+ QV+ 
Sbjct: 60  VKAQSNKVSTGASSNAAK--VDGPSSAEGKEKNSLKESSASSPELATEESISEFLTQVTT 117

Query: 121 LVKLVDSRDIVELQLKQSDCELMIRKREAL 150
           LVKLVDSRDIVELQLKQ DCEL+IRK+EAL
Sbjct: 118 LVKLVDSRDIVELQLKQLDCELVIRKKEAL 147



 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 34/48 (70%)

Query: 208 PPLKCPMAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIE 255
           P +K PMAGTFYRSPAPGEPPF            +CI+EAMKLMNEIE
Sbjct: 204 PTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKGQVLCIVEAMKLMNEIE 251