Miyakogusa Predicted Gene

Lj2g3v1069340.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1069340.1 Non Chatacterized Hit- tr|C0P510|C0P510_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,54.47,3e-18,Plant
calmodulin-binding domain,Calmodulin-binding domain, plant; seg,NULL;
coiled-coil,NULL; CaM_bi,CUFF.36176.1
         (604 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G39380.1 | Symbols:  | Plant calmodulin-binding protein-relat...   133   3e-31
AT5G15430.1 | Symbols:  | Plant calmodulin-binding protein-relat...   111   2e-24
AT5G61260.1 | Symbols:  | Plant calmodulin-binding protein-relat...    96   8e-20
AT5G07820.1 | Symbols:  | Plant calmodulin-binding protein-relat...    89   8e-18

>AT5G39380.1 | Symbols:  | Plant calmodulin-binding protein-related
           | chr5:15759163-15760686 REVERSE LENGTH=507
          Length = 507

 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/120 (61%), Positives = 89/120 (74%), Gaps = 3/120 (2%)

Query: 476 DDQMIKLKFRRGTVVDNQLERSTPRRLKFRRAKLLGEKASVRDEAKRRSFKKRDEPCSDD 535
           D+   KL+FRRGT+VD        R+LKFRR + LGE  + +D   RRSFKKR++   ++
Sbjct: 390 DEAARKLRFRRGTIVDPDTVGEKARKLKFRRGRGLGEDKA-QDAQVRRSFKKRED-IREE 447

Query: 536 NGAASQEKIVLRHQDTQDKKDSQGLLNNVIEETANKLVEARKSKVKALVGAFETVISLQE 595
                 EK+VLRHQD Q+K D+QGL NNVIEETA+KLVEARKSKVKALVGAFETVISLQE
Sbjct: 448 EVNEDGEKVVLRHQDVQEK-DAQGLFNNVIEETASKLVEARKSKVKALVGAFETVISLQE 506



 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 38/63 (60%)

Query: 3  SAGKASSGNSDEKTVPNYLRASTGSCHDFCKYGRKHAFGLKERRSVPSRDTRKKLHQSSE 62
          S GKA +    EK +P+YLRASTGSCHD CKYG++     K  RS   +  +K L  +  
Sbjct: 28 STGKAMTSKPKEKKIPHYLRASTGSCHDLCKYGKRQIPVEKPWRSSTKKIFKKSLDDNLN 87

Query: 63 ESI 65
          E++
Sbjct: 88 ETL 90


>AT5G15430.1 | Symbols:  | Plant calmodulin-binding protein-related
           | chr5:5010180-5011616 FORWARD LENGTH=478
          Length = 478

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 480 IKLKFRRGTVVDNQLERSTPRRLKFRRAKLLGEKASVRDEAKRRSFKKRDEPCSDDNGAA 539
           +KL+ RRG ++D   E ++PR+LKF+R K++    +      RR  K +    S+D    
Sbjct: 355 MKLRIRRGKIIDFGSEGNSPRKLKFKRGKIISGADTTSKSGGRRRLKTKGTNLSNDKEQQ 414

Query: 540 SQEKIVLRHQDTQDKKDSQGLL-NNVIEETANKLVEARKSKVKALVGAFETVISLQEKKP 598
            + ++VL+HQDT+ K++S+ LL N VI+ETANKLV+ RKSKVKALVGAFE+VISLQEK  
Sbjct: 415 RKPRVVLKHQDTEKKRESRVLLFNKVIKETANKLVQTRKSKVKALVGAFESVISLQEKTS 474

Query: 599 S 599
           S
Sbjct: 475 S 475



 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 26/35 (74%)

Query: 3  SAGKASSGNSDEKTVPNYLRASTGSCHDFCKYGRK 37
          S GK S   + EK VPNYLR+ TGSCHD CKYGRK
Sbjct: 22 STGKLSFLYTQEKVVPNYLRSPTGSCHDACKYGRK 56


>AT5G61260.1 | Symbols:  | Plant calmodulin-binding protein-related
           | chr5:24637109-24638599 FORWARD LENGTH=496
          Length = 496

 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 53/118 (44%), Positives = 78/118 (66%), Gaps = 5/118 (4%)

Query: 481 KLKFRRGTVVDNQLERSTPRRLKFRRAKLLGEKASVRDEAKRRSFKKRD---EPCSDDNG 537
           ++ F++G V+D + E S+PR +KF+  K + ++   + E K+++ K R    E  +D   
Sbjct: 355 QMTFKKGKVLDPKPEDSSPRWIKFK--KRVVQELKTQSEGKKKNLKDRRLGVETKTDSCE 412

Query: 538 AASQEKIVLRHQDTQDKKDSQGLLNNVIEETANKLVEARKSKVKALVGAFETVISLQE 595
            + +EK+VLRH+  + KK    L NNVIEET NKL + RK KVKAL+GAFETVISLQ+
Sbjct: 413 GSKREKVVLRHRKVEGKKKMITLFNNVIEETVNKLTKVRKHKVKALIGAFETVISLQD 470


>AT5G07820.1 | Symbols:  | Plant calmodulin-binding protein-related
           | chr5:2498861-2500546 REVERSE LENGTH=561
          Length = 561

 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 1/116 (0%)

Query: 481 KLKFRRGTVVDNQLERSTPRRLKFRRAKLLGEKASVRD-EAKRRSFKKRDEPCSDDNGAA 539
           ++ F++G V++ + E ST   +KF++  +   K    D   K++S K + E     NG  
Sbjct: 423 QMNFKKGKVLEPKPEDSTTTSIKFKKIVVQEPKLRTSDVNKKKKSLKDKREGVGKINGEG 482

Query: 540 SQEKIVLRHQDTQDKKDSQGLLNNVIEETANKLVEARKSKVKALVGAFETVISLQE 595
            +EK+VLRH+  + KK  Q L NNVIEET NKL E RKSKVKALVGAFETVISLQ+
Sbjct: 483 KREKVVLRHRKVEVKKKLQTLFNNVIEETVNKLEEVRKSKVKALVGAFETVISLQD 538