Miyakogusa Predicted Gene
- Lj2g3v1069250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1069250.1 Non Chatacterized Hit- tr|I1LWQ0|I1LWQ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52911
PE,90.24,0,DUF4336,Protein of unknown function DUF4336;
seg,NULL,CUFF.36174.1
(451 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01060.1 | Symbols: | unknown protein; Has 640 Blast hits to... 624 e-179
AT3G01060.2 | Symbols: | unknown protein; Has 637 Blast hits to... 600 e-172
AT3G01060.3 | Symbols: | unknown protein; Has 35333 Blast hits ... 488 e-138
>AT3G01060.1 | Symbols: | unknown protein; Has 640 Blast hits to
638 proteins in 201 species: Archae - 0; Bacteria - 293;
Metazoa - 0; Fungi - 71; Plants - 72; Viruses - 0; Other
Eukaryotes - 204 (source: NCBI BLink). |
chr3:16831-18782 REVERSE LENGTH=455
Length = 455
Score = 624 bits (1609), Expect = e-179, Method: Compositional matrix adjust.
Identities = 306/363 (84%), Positives = 328/363 (90%)
Query: 89 RRTIRTEAVKGCIWLFEQEQALGFSSVSTNTRMTVIKLKSGGLWVHAPIAPTDECIQLIK 148
RRTIRTEAVKGCIW+FEQEQALGFSSVSTN RMTVIKLKSGGLWVHAPIAPT EC+QLIK
Sbjct: 92 RRTIRTEAVKGCIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECVQLIK 151
Query: 149 ELGAPVECIVLPTFAYEHKIFVGPFSRKFPLAQVWVAPRQWSWPLNLPLEFFGIFRAKTL 208
ELGAPVE IVLPTFAYEHKIFVGPFSRKFP AQVWVAPRQWSWPLNLPLEFFGIFRAK +
Sbjct: 152 ELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEFFGIFRAKII 211
Query: 209 KDEDSSTPWAGEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVPRQPPECISK 268
KD D STPWA EIEQKVLSSPEVGIGPYVEVAFYHK SRTLLVTDAVIFVPR+PP IS
Sbjct: 212 KDRDLSTPWAEEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISN 271
Query: 269 ESLLASAKNGLAVKLLSKGREVPDDPVIDDKRNRQKGWERMVLQILFLGPSNLLEPNASF 328
ESLLASAKNGLAVK+LSKG+++P+DPV+D+ RQKGWERMVLQILFLGPSNLLEPNASF
Sbjct: 272 ESLLASAKNGLAVKILSKGKDIPNDPVVDNPNTRQKGWERMVLQILFLGPSNLLEPNASF 331
Query: 329 AQMSQKLIVSPIVKTLVFSKVPEKVREWVDSISRDWRFKRIIPAHFAAPVNXXXXXXXXX 388
A+MSQKLIVSPIVKTLVFSKVPEKVR+W+D I+RDWRFKRIIPAHF AP+N
Sbjct: 332 ARMSQKLIVSPIVKTLVFSKVPEKVRDWIDEIARDWRFKRIIPAHFEAPINAGRSDFLAA 391
Query: 389 XXXLDEFLVDPNPTWPSLSLLFSSIMGKAASYFPPDDMRTLSSLDQFLVSVGAVKRTVSG 448
L++ L + T PSLSLLF+S+MGKAASYFPPDDMRTLSSLDQFLVSVGAVK+TVSG
Sbjct: 392 FGFLEDLLGERYVTRPSLSLLFTSLMGKAASYFPPDDMRTLSSLDQFLVSVGAVKKTVSG 451
Query: 449 RKR 451
RKR
Sbjct: 452 RKR 454
>AT3G01060.2 | Symbols: | unknown protein; Has 637 Blast hits to
635 proteins in 201 species: Archae - 0; Bacteria - 291;
Metazoa - 0; Fungi - 72; Plants - 72; Viruses - 0; Other
Eukaryotes - 202 (source: NCBI BLink). |
chr3:16831-18782 REVERSE LENGTH=447
Length = 447
Score = 600 bits (1547), Expect = e-172, Method: Compositional matrix adjust.
Identities = 298/363 (82%), Positives = 320/363 (88%), Gaps = 8/363 (2%)
Query: 89 RRTIRTEAVKGCIWLFEQEQALGFSSVSTNTRMTVIKLKSGGLWVHAPIAPTDECIQLIK 148
RRTIRTEAVKGCIW+FEQEQALGFSSVSTN RMTVIKLKSGGLWVHAPIAPT EC+QLIK
Sbjct: 92 RRTIRTEAVKGCIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECVQLIK 151
Query: 149 ELGAPVECIVLPTFAYEHKIFVGPFSRKFPLAQVWVAPRQWSWPLNLPLEFFGIFRAKTL 208
ELGAPVE IVLPTFAYEHKIFVGPFSRKFP AQVWVAPRQWSWPLNLPLEFFGIFRAK +
Sbjct: 152 ELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEFFGIFRAKII 211
Query: 209 KDEDSSTPWAGEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVPRQPPECISK 268
KD D STPWA EIEQKVLSSPEV AFYHK SRTLLVTDAVIFVPR+PP IS
Sbjct: 212 KDRDLSTPWAEEIEQKVLSSPEV--------AFYHKRSRTLLVTDAVIFVPRKPPSSISN 263
Query: 269 ESLLASAKNGLAVKLLSKGREVPDDPVIDDKRNRQKGWERMVLQILFLGPSNLLEPNASF 328
ESLLASAKNGLAVK+LSKG+++P+DPV+D+ RQKGWERMVLQILFLGPSNLLEPNASF
Sbjct: 264 ESLLASAKNGLAVKILSKGKDIPNDPVVDNPNTRQKGWERMVLQILFLGPSNLLEPNASF 323
Query: 329 AQMSQKLIVSPIVKTLVFSKVPEKVREWVDSISRDWRFKRIIPAHFAAPVNXXXXXXXXX 388
A+MSQKLIVSPIVKTLVFSKVPEKVR+W+D I+RDWRFKRIIPAHF AP+N
Sbjct: 324 ARMSQKLIVSPIVKTLVFSKVPEKVRDWIDEIARDWRFKRIIPAHFEAPINAGRSDFLAA 383
Query: 389 XXXLDEFLVDPNPTWPSLSLLFSSIMGKAASYFPPDDMRTLSSLDQFLVSVGAVKRTVSG 448
L++ L + T PSLSLLF+S+MGKAASYFPPDDMRTLSSLDQFLVSVGAVK+TVSG
Sbjct: 384 FGFLEDLLGERYVTRPSLSLLFTSLMGKAASYFPPDDMRTLSSLDQFLVSVGAVKKTVSG 443
Query: 449 RKR 451
RKR
Sbjct: 444 RKR 446
>AT3G01060.3 | Symbols: | unknown protein; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr3:17055-18782 REVERSE LENGTH=372
Length = 372
Score = 488 bits (1256), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/264 (89%), Positives = 249/264 (94%)
Query: 89 RRTIRTEAVKGCIWLFEQEQALGFSSVSTNTRMTVIKLKSGGLWVHAPIAPTDECIQLIK 148
RRTIRTEAVKGCIW+FEQEQALGFSSVSTN RMTVIKLKSGGLWVHAPIAPT EC+QLIK
Sbjct: 92 RRTIRTEAVKGCIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECVQLIK 151
Query: 149 ELGAPVECIVLPTFAYEHKIFVGPFSRKFPLAQVWVAPRQWSWPLNLPLEFFGIFRAKTL 208
ELGAPVE IVLPTFAYEHKIFVGPFSRKFP AQVWVAPRQWSWPLNLPLEFFGIFRAK +
Sbjct: 152 ELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEFFGIFRAKII 211
Query: 209 KDEDSSTPWAGEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVPRQPPECISK 268
KD D STPWA EIEQKVLSSPEVGIGPYVEVAFYHK SRTLLVTDAVIFVPR+PP IS
Sbjct: 212 KDRDLSTPWAEEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISN 271
Query: 269 ESLLASAKNGLAVKLLSKGREVPDDPVIDDKRNRQKGWERMVLQILFLGPSNLLEPNASF 328
ESLLASAKNGLAVK+LSKG+++P+DPV+D+ RQKGWERMVLQILFLGPSNLLEPNASF
Sbjct: 272 ESLLASAKNGLAVKILSKGKDIPNDPVVDNPNTRQKGWERMVLQILFLGPSNLLEPNASF 331
Query: 329 AQMSQKLIVSPIVKTLVFSKVPEK 352
A+MSQKLIVSPIVKTLVFSKVPEK
Sbjct: 332 ARMSQKLIVSPIVKTLVFSKVPEK 355