Miyakogusa Predicted Gene

Lj2g3v1069200.4

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1069200.4 Non Chatacterized Hit- tr|I1N691|I1N691_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,89.75,0,RING/U-box,NULL; Modified RING finger domain,U box
domain; seg,NULL; no description,Zinc finger, RIN,CUFF.36534.4
         (793 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15400.1 | Symbols:  | U-box domain-containing protein | chr5...  1239   0.0  

>AT5G15400.1 | Symbols:  | U-box domain-containing protein |
            chr5:4997764-5002907 REVERSE LENGTH=1038
          Length = 1038

 Score = 1239 bits (3207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/798 (75%), Positives = 680/798 (85%), Gaps = 18/798 (2%)

Query: 1    MNGRAIEMTSILGPFFHVSALPDQTFFRSLPDVGQQCFSDSSTRRQADLVSSFSTIKNVM 60
            MNGRA+E+TSILGPFFH+SALPD T F+S PDVGQQCFS++S RR ADL+SSFSTIKN M
Sbjct: 254  MNGRAMELTSILGPFFHISALPDNTLFKSQPDVGQQCFSEASERRPADLLSSFSTIKNFM 313

Query: 61   NNXXXXXXXXXXXXXXXXDTRENVLEYLAEVININASRAHIQVDPITCASSGMFVNLSAV 120
            N                 DTRE VL++LAEVIN NASRAHIQVDP++CASSGMFVNLSAV
Sbjct: 314  NILYSGLHDVLMILLKSTDTRERVLQFLAEVINANASRAHIQVDPVSCASSGMFVNLSAV 373

Query: 121  MLRLCEPFLDANLTKRDKIDPNYVHYSNRLKLSGLTALHASSEEITEWLNSKNPSKAGGI 180
            MLRLCEPFLD +LTKRDKIDP Y    +RLKLS LTALHASSEE+TEW+     + A   
Sbjct: 374  MLRLCEPFLDPHLTKRDKIDPKYAFCGHRLKLSDLTALHASSEEVTEWIGKDAMANANDA 433

Query: 181  DQCNDDKKRXXXXXXXXXXXXXXXXXXXKENSARGQK----SKYSFICECFFMTARVLNL 236
             + N ++ R                     ++A GQ     +KY+FICECFFMTARVLNL
Sbjct: 434  GRENGNESRLLQSKEATS----------SSSNASGQNAKSATKYTFICECFFMTARVLNL 483

Query: 237  GLLKAFSDFKHLVQDISRSEDALSTLKGMQGHSPSPQLELDISRLEKELELYSQEKLCYE 296
            GLLKA SDFKHL QDISR ED L+TLK M+  +PSPQLELDISR+EKELEL SQEKLC+E
Sbjct: 484  GLLKALSDFKHLAQDISRGEDNLATLKAMRDQAPSPQLELDISRMEKELELSSQEKLCHE 543

Query: 297  AQILRDNTLIQNALTFYRLMIVWLVGLVGGFKMPLPQTCPMEFATMPEHFVEDAMELLIF 356
            AQILRD   IQ AL+FYRLM+VWLVGLVGGFKMPLP TCPMEF+ MPEHFVEDAMELLIF
Sbjct: 544  AQILRDGDFIQRALSFYRLMVVWLVGLVGGFKMPLPSTCPMEFSCMPEHFVEDAMELLIF 603

Query: 357  ASRIPRALEGVVLDEFMNFIIMFMASPDFIKNPYLRAKMVEVLNCWMPRTSGSSATAT-L 415
            ASRIP+AL+GV LD+FMNFIIMFMASP++++NPYLRAKMVEVLNCWMPR+S SS+  + L
Sbjct: 604  ASRIPKALDGVPLDDFMNFIIMFMASPEYVRNPYLRAKMVEVLNCWMPRSSSSSSATSTL 663

Query: 416  FEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWKVPSHRNAWRQ 475
            FEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLW+VPSHRNAWR+
Sbjct: 664  FEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRR 723

Query: 476  IAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPVQERQERT 535
            IAK+EEKGVYLNFLNFL+NDSIYLLDESLNKILE+K++EA+MSNTAEWE+RP QERQERT
Sbjct: 724  IAKDEEKGVYLNFLNFLVNDSIYLLDESLNKILEIKQIEADMSNTAEWEQRPTQERQERT 783

Query: 536  RLFHSQENIIRIDMKLANEDVSMLAFTSEQITVPFLLPEMVERVASMLNYFLLQLVGPQR 595
            RLFHSQENI+RIDMKLANEDV+MLAFTSE+IT PFLLPEMVERVA+MLNYFLLQLVGPQR
Sbjct: 784  RLFHSQENIVRIDMKLANEDVTMLAFTSEEITAPFLLPEMVERVANMLNYFLLQLVGPQR 843

Query: 596  KSLSLKDPEKYEFRPKDLLKQIVHIYIHLARGDTNAIFPAAISKDGRSYNDQLFSAGADV 655
            KSLSLKDPEKYEFRPK LLKQIV IY++LARGDT  IFP AIS DGRSYN+QLF+AGADV
Sbjct: 844  KSLSLKDPEKYEFRPKQLLKQIVRIYVNLARGDTVNIFPGAISSDGRSYNEQLFNAGADV 903

Query: 656  LRRIGEDPKVIQEFIQLGAKAKVAASEAMDAEATLGEIPDEFLDPIQYTLMKDPVILPSS 715
            LRRIGE+ ++IQEF++LG KAK AASEA+DAEA LGEIPDEFLDPIQYTLM+DPVILPSS
Sbjct: 904  LRRIGEEGRIIQEFMELGTKAKAAASEALDAEAALGEIPDEFLDPIQYTLMRDPVILPSS 963

Query: 716  RITVDRPVIQRHLLSDASDPFNRSHLTADMLIPDVELKARIEEFVRSQEMKKHGEGLSIQ 775
            RITVDRP+IQRHLLSD  DPFNR+HLT+DMLIPD+ELKA+I+EFV+S + KK   G    
Sbjct: 964  RITVDRPIIQRHLLSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKSHQSKKRTSGE--D 1021

Query: 776  SSSKATIQTTNGEKMLID 793
            SS+K  IQTTN + MLID
Sbjct: 1022 SSNKERIQTTNSD-MLID 1038