Miyakogusa Predicted Gene

Lj2g3v1069010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1069010.1 Non Chatacterized Hit- tr|I1LWP2|I1LWP2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24331
PE,83.49,0,Chorismate mutase II,Chorismate mutase, type II;
CM_2,Chorismate mutase, type II; CHORISMATE_MUT_3,C,CUFF.36167.1
         (314 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G29200.1 | Symbols: CM1, ATCM1 | chorismate mutase 1 | chr3:1...   358   3e-99
AT1G69370.1 | Symbols: CM3, cm-3 | chorismate mutase 3 | chr1:26...   335   3e-92
AT5G10870.1 | Symbols: ATCM2, CM2 | chorismate mutase 2 | chr5:3...   241   6e-64

>AT3G29200.1 | Symbols: CM1, ATCM1 | chorismate mutase 1 |
           chr3:11164582-11166258 REVERSE LENGTH=340
          Length = 340

 Score =  358 bits (918), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 177/269 (65%), Positives = 208/269 (77%), Gaps = 7/269 (2%)

Query: 53  GSVPTKERVDESENLTLDHIRHSLIRQEDSIIFSLLERAQYCYNEDTYDPNAFSMDGFHG 112
           GS+  K+RVDESE+LTL+ IR+SLIRQEDSIIF LLERA+YCYN DTYDP AF MDGF+G
Sbjct: 72  GSLTGKKRVDESESLTLEGIRNSLIRQEDSIIFGLLERAKYCYNADTYDPTAFDMDGFNG 131

Query: 113 SLVEYMVRETETLHAKVGRYKSPDEHXXXXXXXXXXXXXXXXXXXXXXXIAESININVKV 172
           SLVEYMV+ TE LHAKVGR+KSPDEH                        A+SININ K+
Sbjct: 132 SLVEYMVKGTEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKI 191

Query: 173 WDLYFRVLIPQLVKEGDDGNSGSSSLCDVMCLQALSKRIHYGKFVAEAKFRASPNDYKAA 232
           W++YFR L+P+LVK+GDDGN GS+++CD +CLQ LSKRIHYGKFVAEAKF+ASP  Y++A
Sbjct: 192 WNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESA 251

Query: 233 IIAQDKDKLMDLLTYPEVEEAIKRRVEMKAKTYGQEVVVNMKEHRTEP-------VYKIN 285
           I AQDKD LMD+LT+P VE+AIK+RVEMK +TYGQEV V M+E   E        VYKI+
Sbjct: 252 IKAQDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEEKEEEEEEGNESHVYKIS 311

Query: 286 PSLVADLYSDWIMPLTKEVQVAYLLRKLD 314
           P LV DLY DWIMPLTKEVQV YLLR+LD
Sbjct: 312 PILVGDLYGDWIMPLTKEVQVEYLLRRLD 340


>AT1G69370.1 | Symbols: CM3, cm-3 | chorismate mutase 3 |
           chr1:26080098-26081559 FORWARD LENGTH=316
          Length = 316

 Score =  335 bits (858), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 181/320 (56%), Positives = 215/320 (67%), Gaps = 10/320 (3%)

Query: 1   MEAKLLNTTFSVSPRPSCAFDLTTR-----RASFPFHPTSDFFQKNNLSVRTHAAS-IGS 54
           MEAKLL   F  SP      +LT       R S     +       +L +R  AAS I  
Sbjct: 1   MEAKLLKPAFYNSPN----LNLTNSSRLISRLSIWNDKSKVGLSSGSLFLRLSAASPIRY 56

Query: 55  VPTKERVDESENLTLDHIRHSLIRQEDSIIFSLLERAQYCYNEDTYDPNAFSMDGFHGSL 114
                RVDESE L L+ IRHSLIRQEDSIIF+LLERAQY YN DTYD +AF+M+GF GSL
Sbjct: 57  SRGLLRVDESEYLKLESIRHSLIRQEDSIIFNLLERAQYRYNADTYDEDAFTMEGFQGSL 116

Query: 115 VEYMVRETETLHAKVGRYKSPDEHXXXXXXXXXXXXXXXXXXXXXXXIAESININVKVWD 174
           VE+MVRETE LHAKV RYKSPDEH                        AESININ KVW+
Sbjct: 117 VEFMVRETEKLHAKVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWN 176

Query: 175 LYFRVLIPQLVKEGDDGNSGSSSLCDVMCLQALSKRIHYGKFVAEAKFRASPNDYKAAII 234
           +YF+ L+P+LVK GDDGN GS++LCD MCLQ LSKRIH+GKFVAEAKFR +P  Y+ AI 
Sbjct: 177 MYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIK 236

Query: 235 AQDKDKLMDLLTYPEVEEAIKRRVEMKAKTYGQEVVVNMKEHRTEPVYKINPSLVADLYS 294
            QD+ +LM LLTY  VEE +K+RVE+KA+ +GQ++ +N  E   +P YKI PSLVA LY 
Sbjct: 237 EQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDPETEADPSYKIQPSLVAKLYG 296

Query: 295 DWIMPLTKEVQVAYLLRKLD 314
           + IMPLTKEVQ+ YLLR+LD
Sbjct: 297 ERIMPLTKEVQIEYLLRRLD 316


>AT5G10870.1 | Symbols: ATCM2, CM2 | chorismate mutase 2 |
           chr5:3430691-3432272 REVERSE LENGTH=265
          Length = 265

 Score =  241 bits (614), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 122/252 (48%), Positives = 168/252 (66%), Gaps = 1/252 (0%)

Query: 64  SENLTLDHIRHSLIRQEDSIIFSLLERAQYCYNEDTYDPNAFSMDGFHGSLVEYMVRETE 123
           S  L+LD IR SLIRQED+I+FSL+ERA++  N   ++ +     G   SL E+ VRETE
Sbjct: 14  SNVLSLDLIRESLIRQEDTIVFSLIERAKFPLNSPAFEESRCLDSGSFSSLTEFFVRETE 73

Query: 124 TLHAKVGRYKSPDEHXXXXXXXXXXXXXXXXXXXXXXXIAESININVKVWDLYFRVLIPQ 183
            + AKVGRY+ P+E+                        A S+NIN ++WD+YF+ L+P 
Sbjct: 74  IIQAKVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKELLPL 133

Query: 184 LVKEGDDGNSGSSSLCDVMCLQALSKRIHYGKFVAEAKFRASPNDYKAAIIAQDKDKLMD 243
            VK GDDGN  S++  D+ CLQALS+RIHYGKFVAE KFR +P DY+ AI AQD++ LM 
Sbjct: 134 FVKPGDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREALMK 193

Query: 244 LLTYPEVEEAIKRRVEMKAKTYGQEVVVNMK-EHRTEPVYKINPSLVADLYSDWIMPLTK 302
           LLT+ +VEE +K+RV+ KA+T+GQEV  N      ++  YK++P L + +Y +W++PLTK
Sbjct: 194 LLTFEKVEEMVKKRVQKKAETFGQEVKFNSGYGDESKKKYKVDPLLASRIYGEWLIPLTK 253

Query: 303 EVQVAYLLRKLD 314
            V+V YLLR+LD
Sbjct: 254 LVEVEYLLRRLD 265