Miyakogusa Predicted Gene

Lj2g3v1068970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1068970.1 tr|Q018J2|Q018J2_OSTTA Hus1 protein (ISS)
(Fragment) OS=Ostreococcus tauri GN=Ot05g04280 PE=4
SV=1,29.02,1e-16,seg,NULL; SUBFAMILY NOT NAMED,Cell cycle checkpoint,
Hus1; MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN,CUFF.36144.1
         (321 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52530.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Hus1-like ...   474   e-134

>AT1G52530.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Hus1-like
           protein (InterPro:IPR007150); Has 129 Blast hits to 128
           proteins in 49 species: Archae - 0; Bacteria - 0;
           Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0;
           Other Eukaryotes - 15 (source: NCBI BLink). |
           chr1:19569045-19570004 FORWARD LENGTH=319
          Length = 319

 Score =  474 bits (1221), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/320 (72%), Positives = 260/320 (81%), Gaps = 2/320 (0%)

Query: 1   MKFKAFLTENGVILLERRFIPALEKMGKTCHLYLTKDHAIFLHNLLNGDGIQSIAQFRKE 60
           MKFKAFLTENGV LLE+RF+PA +KMGK CHL LTK+H  FLHNLLNGDG+Q IAQFRK+
Sbjct: 1   MKFKAFLTENGVNLLEKRFLPAFDKMGKNCHLLLTKEHLFFLHNLLNGDGVQCIAQFRKD 60

Query: 61  ALFDDYRISSQNDDRIAFSIDXXXXXXXXXXXXXXXXXXXXXXXXNPNRLQIKLVKKLPP 120
            LFDDYRISSQN+DRIAFS+D                        N  RLQIKLVKKLPP
Sbjct: 61  VLFDDYRISSQNEDRIAFSLDVALLYRAVKSSVSICTEFSGGLASN--RLQIKLVKKLPP 118

Query: 121 NSTNPTPFLTFETSGFKSAVIQDIPISKPLSRAQVVELQNALDLAQDLPQTLLQVPDLNQ 180
           N T P PFLTFET G+KSAVIQD+PI+KPLSR+QV+ELQ ALD AQDLP TL+QV D NQ
Sbjct: 119 NCTQPMPFLTFETKGYKSAVIQDVPITKPLSRSQVIELQTALDSAQDLPPTLVQVQDSNQ 178

Query: 181 MLNFVDRMKHVGDVVNVFISKYGDLRVQVSTTLISLGAEFRNLLVIGEQANAPAEDQNLT 240
           + NFVD M+HVGDV+NV ISK+GDL+VQVSTTLI LG EF+ L VIGE++ AP ED+NL+
Sbjct: 179 LQNFVDHMRHVGDVLNVTISKHGDLQVQVSTTLIRLGIEFQRLSVIGEKSQAPVEDRNLS 238

Query: 241 AQTRSARSILRGDAQSVQVSVKHFAKSLQCHLAKPDCAFYGVAPQGSCLTVIFQFFVPGT 300
           AQ RS R+I RGDAQSVQVSVKHF+KSLQCHL KPD  FYG+APQG+CLTVIFQF VPGT
Sbjct: 239 AQARSERAIARGDAQSVQVSVKHFSKSLQCHLTKPDSTFYGIAPQGACLTVIFQFMVPGT 298

Query: 301 RHTDKSISLHCRLPVLDPGT 320
           R TDKSISLHCRLPVLDPG+
Sbjct: 299 RQTDKSISLHCRLPVLDPGS 318