Miyakogusa Predicted Gene

Lj2g3v1068920.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1068920.1 tr|B9IK24|B9IK24_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_577693 PE=4
SV=1,54.55,4e-18,seg,NULL; DUF3598,Domain of unknown function DUF3598;
no description,Calycin,CUFF.36146.1
         (389 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G29185.1 | Symbols:  | Domain of unknown function (DUF3598) |...   494   e-140
AT3G29185.2 | Symbols:  | Domain of unknown function (DUF3598) |...   428   e-120

>AT3G29185.1 | Symbols:  | Domain of unknown function (DUF3598) |
           chr3:11155092-11157207 REVERSE LENGTH=396
          Length = 396

 Score =  494 bits (1272), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/342 (68%), Positives = 281/342 (82%), Gaps = 3/342 (0%)

Query: 50  AMSIDNLRRFINLNKGKWNGSFYQFDSRGNMLQQVTTKLSASSYGEDELMSLIQTLYIKQ 109
           +MSIDNLR F++LN GKW GSF+QFD  GN+L ++ T+LSASSYGEDEL+SL Q+LYIKQ
Sbjct: 56  SMSIDNLRGFVDLNVGKWTGSFHQFDGNGNLLHKIDTRLSASSYGEDELLSLNQSLYIKQ 115

Query: 110 PXXXXXXXXXXXXXXEWAEYKIKETNMFTVDKYQQIGFFPSERAFALRYQTAGMLDTVLR 169
           P              EW EYKIKETNMFTVDKYQQIGFFP ERAF+LRYQTAGMLDT LR
Sbjct: 116 PTSATSVSEEEEEEPEWVEYKIKETNMFTVDKYQQIGFFPKERAFSLRYQTAGMLDTTLR 175

Query: 170 QGVLGEDDTGEESPRNLKLPSRRPSIVCENCLYSLQRDMRARAFHILEPKGTVDMLLLFL 229
           QGVLGEDDTGEESPRNLKLPSRRPS+VCENCLYS + D RARAFHI++PKG ++ML++FL
Sbjct: 176 QGVLGEDDTGEESPRNLKLPSRRPSLVCENCLYSKEIDRRARAFHIMDPKGVLEMLIVFL 235

Query: 230 EER--TDGSHPLLESSGDMKSRITPFIGKWKGHSMTKRSGVYGSTIAEADTVVLHEMDSN 287
           EER   + +HP+L+++ +   RI PF+G WKG S+TKRSGVYG+T++EADTV + EM+  
Sbjct: 236 EERGLENLAHPVLDNAQNDAERINPFLGTWKGRSVTKRSGVYGATLSEADTVAVLEMNDK 295

Query: 288 GQLIQDVTSTSHGENVTTTNVHWTGAISENLVTFDGGYQMILLPGGMYMGCPYDVAKSVA 347
           GQ++QD++STS  + V TTNVHW G +S++LVTF  GYQM LLPGGMYMGCP DV+K VA
Sbjct: 296 GQVVQDISSTSDEKKV-TTNVHWEGKMSKDLVTFAEGYQMTLLPGGMYMGCPCDVSKCVA 354

Query: 348 QSKSFHLEFCWLETPDKRQRLVRTYDVEGLAVSSTYFLETRL 389
             KSFHLEFCWLE+P  RQRL+RTYD EGLAVSSTYF ET++
Sbjct: 355 DLKSFHLEFCWLESPSSRQRLIRTYDHEGLAVSSTYFTETKM 396


>AT3G29185.2 | Symbols:  | Domain of unknown function (DUF3598) |
           chr3:11155092-11157207 REVERSE LENGTH=411
          Length = 411

 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/379 (57%), Positives = 263/379 (69%), Gaps = 62/379 (16%)

Query: 50  AMSIDNLRRFINLNKGKWNGSFYQFDSRGNMLQQVTTKLSASSYGEDELMSLIQTLYIKQ 109
           +MSIDNLR F++LN GKW GSF+QFD  GN+L ++ T+LSASSYGEDEL+SL Q+LYIKQ
Sbjct: 56  SMSIDNLRGFVDLNVGKWTGSFHQFDGNGNLLHKIDTRLSASSYGEDELLSLNQSLYIKQ 115

Query: 110 PXXXXXXXXXXXXXXEWAEYKIKETNMFTVDKYQQ------------------------- 144
           P              EW EYKIKETNMFTVDKYQQ                         
Sbjct: 116 PTSATSVSEEEEEEPEWVEYKIKETNMFTVDKYQQVRVALFISISQDTKFEFCDLSLKYL 175

Query: 145 ------------IGFFPSERAFALRYQTAGMLDTVLRQGVLGEDDTGEESPRNLKLPSRR 192
                       IGFFP ERAF+LRYQTAGMLDT LRQGVLGEDDTGEESPRNLKLPSRR
Sbjct: 176 MTILISIISSLQIGFFPKERAFSLRYQTAGMLDTTLRQGVLGEDDTGEESPRNLKLPSRR 235

Query: 193 PSIVCENCLYSLQRDMRARAFHILEPKGTVDMLLLFLEER--TDGSHPLLESSGDMKSRI 250
           PS+VCENCLYS + D RARAFHI++PKG ++ML++FLEER   + +HP+L+++ +   RI
Sbjct: 236 PSLVCENCLYSKEIDRRARAFHIMDPKGVLEMLIVFLEERGLENLAHPVLDNAQNDAERI 295

Query: 251 TPFIGKWKGHSMTKRSGVYGSTIAEADTVVLHEMDSNGQLIQDVTSTSHGENVTTTNVHW 310
            PF+G WKG S+TKRSGVYG+T++EADTV + EM+  GQ++QD++STS  + V TTNVHW
Sbjct: 296 NPFLGTWKGRSVTKRSGVYGATLSEADTVAVLEMNDKGQVVQDISSTSDEKKV-TTNVHW 354

Query: 311 TGAISENLVTFDGGYQMILLPGGMYMGCPYDVAKSVAQSKSFHLEFCWLETPDKRQRLVR 370
            G +S++LVTF  GYQM LLPG                      EFCWLE+P  RQRL+R
Sbjct: 355 EGKMSKDLVTFAEGYQMTLLPG----------------------EFCWLESPSSRQRLIR 392

Query: 371 TYDVEGLAVSSTYFLETRL 389
           TYD EGLAVSSTYF ET++
Sbjct: 393 TYDHEGLAVSSTYFTETKM 411