Miyakogusa Predicted Gene

Lj2g3v1068820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1068820.1 Non Chatacterized Hit- tr|D7L4E7|D7L4E7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,57.78,0.00000009, ,CUFF.36132.1
         (76 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G05350.1 | Symbols:  | unknown protein; Has 22 Blast hits to ...    48   1e-06

>AT2G05350.1 | Symbols:  | unknown protein; Has 22 Blast hits to 16
           proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 0; Plants - 22; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr2:1950455-1954740 FORWARD LENGTH=453
          Length = 453

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 10  LPEELMPQLAMIYARVPCICFDLVGYNRPDICSKQLGFNPLDLWRPRHLAKNM 62
           LPE    QL M++A+VPCICF+ + YN P    KQLG    D+  P  +  N+
Sbjct: 106 LPE-YTSQLRMVFAQVPCICFNTIAYNCPGTFFKQLGQEESDIRVPPEIKPNL 157