Miyakogusa Predicted Gene
- Lj2g3v1068690.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1068690.1 tr|G7KKZ3|G7KKZ3_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_6g0,79.75,0,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; DYW_deaminase,NULL; seg,NULL; no
descr,CUFF.36121.1
(633 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 693 0.0
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 454 e-127
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 420 e-117
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 401 e-112
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 393 e-109
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 388 e-108
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 385 e-107
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 381 e-106
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 380 e-105
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 374 e-103
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 369 e-102
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 369 e-102
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 361 e-100
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 3e-99
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 8e-99
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 358 9e-99
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 1e-98
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 352 4e-97
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 352 4e-97
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 4e-97
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 1e-96
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 2e-96
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 350 2e-96
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 349 3e-96
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 346 2e-95
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 4e-95
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 9e-95
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 343 2e-94
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 343 2e-94
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 3e-94
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 6e-94
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 340 2e-93
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 339 3e-93
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 1e-92
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 8e-92
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 5e-91
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 8e-91
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 330 1e-90
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 1e-90
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 330 3e-90
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 4e-90
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 5e-90
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 1e-89
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 326 3e-89
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 4e-87
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 318 6e-87
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 6e-86
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 9e-86
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 7e-84
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 6e-83
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 302 5e-82
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 301 7e-82
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 299 4e-81
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 9e-80
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 3e-78
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 289 5e-78
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 287 2e-77
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 8e-76
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 280 2e-75
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 280 2e-75
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 8e-75
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 3e-73
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 4e-73
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 271 1e-72
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 268 1e-71
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 1e-71
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 2e-70
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 2e-67
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 3e-67
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 2e-64
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 4e-64
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 5e-63
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 2e-62
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 8e-62
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 6e-61
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 232 6e-61
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 6e-61
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 231 9e-61
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 2e-60
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 228 7e-60
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 227 2e-59
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 5e-57
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 9e-57
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 206 5e-53
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 9e-53
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 2e-52
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 6e-51
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 3e-50
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 5e-50
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 5e-50
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 7e-48
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 186 4e-47
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 8e-46
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 1e-41
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 9e-41
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 6e-40
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 8e-39
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 5e-28
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 5e-28
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 80 5e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 79 1e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 74 2e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 5e-13
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 8e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 72 2e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 67 4e-11
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 66 6e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 7e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 8e-10
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 1e-09
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 60 3e-09
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 60 5e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 56 8e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 56 9e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 54 5e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 5e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 51 2e-06
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 51 2e-06
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 51 3e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 50 3e-06
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/608 (56%), Positives = 440/608 (72%), Gaps = 18/608 (2%)
Query: 36 PGKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI 95
PGK+LHAV T +GL +P +L NA+ YA+ A+KLFDEIP S KD+VD+T L+
Sbjct: 24 PGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLL 83
Query: 96 ----RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
R + S++LF+EMR+ + ID +L D Q H VK G
Sbjct: 84 SSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVL 143
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+VCNA+MD+Y K GL+ E +++F E+E SVVSWTVVLD VVKWEG+E GR VF M
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
PERN VAWTVM+ GY+G GFT+E LL EMVF CG LN VTLCS+LSAC+QSG++ VG
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 272 RWVHGFAVKA---MGWDLG---VMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAV 325
RWVH +A+K MG + VMVGT+LVDMYAKCG I ++ VF+ M +RNVV WNA+
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNAL 323
Query: 326 LGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI 385
GLAMHG G+ V+DMFP M+ EVKPD +TF A+LSACSHSG+V++G + F L Y +
Sbjct: 324 FSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGL 382
Query: 386 RPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVR 445
P+++HYACMVDLLGRAG +EEAE+L+++MP+ PNEVVLGSLLGSC HGK+++AE+I R
Sbjct: 383 EPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKR 442
Query: 446 ELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFS 505
EL++M P NTEY IL+SNMY G+ + A+ R L+KRGIRK+PG+SSIYV+ +H+FS
Sbjct: 443 ELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFS 502
Query: 506 AGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAH 565
+GD+SHPRT EIYLKL+++I R+R AGYVP+ + V S GD LEE EQ L H
Sbjct: 503 SGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLV---SHSEGD----LEEKEQALCCH 555
Query: 566 SEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQG 625
SEKLA+CFGL+ T +PL +FKNLRIC+DCHSA+KI S +Y REI++RDR RFH FK G
Sbjct: 556 SEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGG 615
Query: 626 SCSCSDYW 633
SCSCSDYW
Sbjct: 616 SCSCSDYW 623
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/602 (39%), Positives = 361/602 (59%), Gaps = 18/602 (2%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ LH +A + + S ++F+ N+++H Y +C A K+F I + KD V + ++I
Sbjct: 150 GQSLHGMAVKSAVGS--DVFVANSLIHCYFSCGDLDSACKVFTTIKE--KDVVSWNSMIN 205
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
++ P ++L+LF +M + ++ + G QV S + +
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ NA++D+Y K G + +A+++F +E V+WT +LDG E E+ R V + MP
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+++ VAW +I Y NG EA + E+ +LN +TL S LSAC+Q G + +GR
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
W+H + +K G + V ++L+ MY+KCG + + VF ++ +R+V W+A++GGLAMH
Sbjct: 386 WIHSY-IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G G VDMF M E VKP+ VTF + ACSH+GLV++ F +ES Y I PE +H
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
YAC+VD+LGR+G+LE+A ++ MPI P+ V G+LLG+C H L LAE L+E++
Sbjct: 505 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P N H+LLSN+YA GK E + R+ ++ G++K PG SSI +DG +H+F +GD +H
Sbjct: 565 PRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH 624
Query: 512 PRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLAL 571
P + ++Y KL +++ +L+ GY P + QVL E E EQ L HSEKLA+
Sbjct: 625 PMSEKVYGKLHEVMEKLKSNGYEPEIS-QVL-------QIIEEEEMKEQSLNLHSEKLAI 676
Query: 572 CFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSD 631
C+GLIST + + + KNLR+C DCHS K+ S +Y REI+VRDRYRFH F+ G CSC+D
Sbjct: 677 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 736
Query: 632 YW 633
+W
Sbjct: 737 FW 738
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 9/299 (3%)
Query: 178 GEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFW 237
G P S + + + +E R VFD +P+ N AW +I Y + W
Sbjct: 57 GTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIW 116
Query: 238 LLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVK-AMGWDLGVMVGTSLVD 296
+MV N T ++ A ++ + +G+ +HG AVK A+G D V V SL+
Sbjct: 117 AFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSD--VFVANSLIH 174
Query: 297 MYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVT 355
Y CG + A VF + ++VV+WN+++ G G +++F M E+VK VT
Sbjct: 175 CYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVT 234
Query: 356 FMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM 415
+ +LSAC+ +E GRQ +E + + M+D+ + G +E+A+ L M
Sbjct: 235 MVGVLSACAKIRNLEFGRQVCSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 293
Query: 416 PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKA 474
+ N V ++L + A +++ + + D + ++ L+S Y +GK +A
Sbjct: 294 EEKDN-VTWTTMLDGYAISEDYEAAREVLNSMPQKDIV--AWNALIS-AYEQNGKPNEA 348
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 209/526 (39%), Gaps = 96/526 (18%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRR 97
KQ H TG S P + + ++ A +ARK+FDEIP+ +S + LIR
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP--NSFAWNTLIRA 104
Query: 98 CP----PLESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
P+ S+ F++M + + + ++G +H VK G
Sbjct: 105 YASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N+++ Y G L A KVF I+ VVSW
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWN----------------------- 201
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
MI G+V G +A L K+M + + VT+ VLSAC++ ++ GR
Sbjct: 202 --------SMINGFVQKGSPDKALELFKKME-SEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
V + ++ ++ + + +++DMY KCG I A +F M ++ V W +L G A+
Sbjct: 253 QVCSY-IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 333 GMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
+A ++ M ++ D V + AL+SA +G + F +L+
Sbjct: 312 EDYEAAREVLNSMPQK---DIVAWNALISAYEQNGKPNEALIVFHELQ------------ 356
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
L K M + N++ L S L +C G L+L + + ++
Sbjct: 357 ------------------LQKNMKL--NQITLVSTLSACAQVGALELG-RWIHSYIKKHG 395
Query: 453 LNTEYHIL--LSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
+ +H+ L +MY+ G +EK+ ++KR + M G L G+++
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI-----GGLAMHGCGNEA 450
Query: 511 HPRTSEIYLKLDDMICRLRLAGYVPN--TTCQVLFGCSSSGDCTEA 554
DM +++ A PN T V CS +G EA
Sbjct: 451 -----------VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 485
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/621 (39%), Positives = 359/621 (57%), Gaps = 41/621 (6%)
Query: 39 QLHAVATVTGLLSSPNLFLRNAILHVYAACALP----SHARKLFDEIPQSHKDSVDYTAL 94
Q+HAV +G + + IL A L +A K+F+++PQ ++ + +
Sbjct: 41 QIHAVFIKSGQMR--DTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ--RNCFSWNTI 96
Query: 95 IR------RCPPLESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVK 147
IR L ++ LF EM + + + G G Q+H +K
Sbjct: 97 IRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALK 156
Query: 148 FGFGKCTRVCNAVMDLYVKFGLLGEARKVFGE--IEVPSVVS------------WTVVLD 193
+GFG V + ++ +YV G + +AR +F + IE VV W V++D
Sbjct: 157 YGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMID 216
Query: 194 GVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCV 253
G ++ ++ R++FD M +R+ V+W MI GY NGF K+A + +EM G N V
Sbjct: 217 GYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG-DIRPNYV 275
Query: 254 TLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKN 313
TL SVL A S+ G + +G W+H +A + G + ++G++L+DMY+KCG I A+ VF+
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDS-GIRIDDVLGSALIDMYSKCGIIEKAIHVFER 334
Query: 314 MSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQG 372
+ R NV+ W+A++ G A+HG +D F M + V+P V ++ LL+ACSH GLVE+G
Sbjct: 335 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Query: 373 RQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCY 432
R+YF + SV + P IEHY CMVDLLGR+G L+EAE + MPI+P++V+ +LLG+C
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 454
Query: 433 AHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGM 492
G +++ +++ L++M P ++ ++ LSNMYA G + + R +K++ IRK PG
Sbjct: 455 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 514
Query: 493 SSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCT 552
S I +DG LH+F D SHP+ EI L ++ +LRLAGY P TT QVL
Sbjct: 515 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITT-QVLLNLEE----- 568
Query: 553 EALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIV 612
E+ E VL HSEK+A FGLISTS G P+ I KNLRIC+DCHS+IK+ S +YKR+I
Sbjct: 569 ---EDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKIT 625
Query: 613 VRDRYRFHSFKQGSCSCSDYW 633
VRDR RFH F+ GSCSC DYW
Sbjct: 626 VRDRKRFHHFQDGSCSCMDYW 646
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/600 (39%), Positives = 343/600 (57%), Gaps = 19/600 (3%)
Query: 39 QLHAVATVTGLLSSPNLFLRNAILH-VYAACALPSHARKLFDEIPQSHKDSVDYTALIRR 97
Q+HA LL P + N LH YA+ H+ LF + D +TA I
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDP--DLFLFTAAINT 104
Query: 98 CPPLESL--QLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTR 155
+ L Q F+ QL LS + + G +H+ V+KFG G
Sbjct: 105 AS-INGLKDQAFLLYVQL-LSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPY 162
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERN 215
V ++D+Y K G + A+KVF + S+VS T ++ K VE+ R +FD M ER+
Sbjct: 163 VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 216 EVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVH 275
V+W VMI GY +GF +A L ++++ + + +T+ + LSACSQ G + GRW+H
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 276 GFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMG 335
F VK+ L V V T L+DMY+KCG + A++VF + R+++VAWNA++ G AMHG
Sbjct: 283 VF-VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYS 341
Query: 336 KAVVDMFPHM--VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYA 393
+ + +F M + ++P +TF+ L AC+H+GLV +G + F + Y I+P+IEHY
Sbjct: 342 QDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYG 401
Query: 394 CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPL 453
C+V LLGRAG L+ A +K M + + V+ S+LGSC HG L ++I L+ ++
Sbjct: 402 CLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK 461
Query: 454 NTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPR 513
N+ ++LLSN+YA G E R ++K++GI K PG+S+I ++ ++H+F AGD+ H +
Sbjct: 462 NSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSK 521
Query: 514 TSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCF 573
+ EIY L + R++ GYVPNT + D E E EQ L HSE+LA+ +
Sbjct: 522 SKEIYTMLRKISERIKSHGYVPNTNTVL-------QDLEET--EKEQSLQVHSERLAIAY 572
Query: 574 GLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
GLIST GSPL IFKNLR+C DCH+ K+ S I R+IV+RDR RFH F GSCSC D+W
Sbjct: 573 GLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/613 (35%), Positives = 351/613 (57%), Gaps = 36/613 (5%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G +LH VA L P F+ + +YA+C ++AR +FDE+ SH+D V + +I
Sbjct: 130 GMELHGVAFKIATLCDP--FVETGFMDMYASCGRINYARNVFDEM--SHRDVVTWNTMIE 185
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R E+ +LF EM+ + D R G+ ++ +++
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 245
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
T + A++ +Y G + AR+ F ++ V ++ T ++ G K ++ +V+FD
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+++ V WT MI YV + + +EA + +EM G + + V++ SV+SAC+ G + +
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMCCS-GIKPDVVSMFSVISACANLGILDKAK 364
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
WVH + G + + + +L++MYAKCG + VF+ M RRNVV+W++++ L+MH
Sbjct: 365 WVHS-CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMH 423
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G + +F M +E V+P+ VTF+ +L CSHSGLVE+G++ F + Y I P++EH
Sbjct: 424 GEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH 483
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
Y CMVDL GRA L EA +++ MP+ N V+ GSL+ +C HG+L+L + + ++E++
Sbjct: 484 YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELE 543
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P + +L+SN+YA + E + RRV++++ + K G+S I +G+ H+F GDK H
Sbjct: 544 PDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRH 603
Query: 512 PRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQ-----VLFAHS 566
+++EIY KLD+++ +L+LAGYVP DC L +VE+ ++ HS
Sbjct: 604 KQSNEIYAKLDEVVSKLKLAGYVP--------------DCGSVLVDVEEEEKKDLVLWHS 649
Query: 567 EKLALCFGLIS------TSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFH 620
EKLALCFGL++ S + I KNLR+C+DCH K+ S +Y+REI+VRDR RFH
Sbjct: 650 EKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFH 709
Query: 621 SFKQGSCSCSDYW 633
+K G CSC DYW
Sbjct: 710 CYKNGLCSCRDYW 722
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/495 (40%), Positives = 303/495 (61%), Gaps = 11/495 (2%)
Query: 140 QVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWE 199
Q+H+ + K G+ N++++ Y G A +F I P VSW V+ G VK
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 200 GVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVL 259
++ +F M E+N ++WT MI GYV KEA L EM E + V+L + L
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ-NSDVEPDNVSLANAL 254
Query: 260 SACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV 319
SAC+Q G + G+W+H + K + ++G L+DMYAKCG + AL VFKN+ +++V
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTR-IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
AW A++ G A HG G+ + F M + +KP+ +TF A+L+ACS++GLVE+G+ F
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYS 373
Query: 379 LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ 438
+E Y ++P IEHY C+VDLLGRAG L+EA+ +++MP++PN V+ G+LL +C H ++
Sbjct: 374 MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIE 433
Query: 439 LAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVD 498
L E+I L+ +DP + ++ +N++A+ K +KA RR++K++G+ KVPG S+I ++
Sbjct: 434 LGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLE 493
Query: 499 GQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEV 558
G H+F AGD+SHP +I K M +L GYVP +L D + +E
Sbjct: 494 GTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLL-------DLVDD-DER 545
Query: 559 EQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYR 618
E ++ HSEKLA+ +GLI T G+ + I KNLR+C+DCH K+ S IYKR+IV+RDR R
Sbjct: 546 EAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTR 605
Query: 619 FHSFKQGSCSCSDYW 633
FH F+ G CSC DYW
Sbjct: 606 FHHFRDGKCSCGDYW 620
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 36/266 (13%)
Query: 204 GRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACS 263
++VFDG + W +MI G+ + + + L + M+ N T S+L ACS
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACS 126
Query: 264 QSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYA------------------------ 299
+H + +G++ V SL++ YA
Sbjct: 127 NLSAFEETTQIHA-QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWN 185
Query: 300 -------KCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKP 351
K G++ IAL +F+ M+ +N ++W ++ G M K + +F M +V+P
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 352 DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELL 411
D V+ LSAC+ G +EQG+ L IR + ++D+ + G +EEA +
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKT-RIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 412 VKKMPIRPNEVVLGSLLGSCY-AHGK 436
K + + + + G Y HG+
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGR 330
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/586 (38%), Positives = 332/586 (56%), Gaps = 59/586 (10%)
Query: 59 NAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQLFIEMRQLG 114
A++ YA+ +A+KLFDEIP KD V + A+I E+L+LF +M +
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPV--KDVVSWNAMISGYAETGNYKEALELFKDMMKTN 261
Query: 115 LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEAR 174
+ D + G +G QVH + GFG ++ NA++DLY K G L
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL---- 317
Query: 175 KVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
E+ +F+ +P ++ ++W +I GY KE
Sbjct: 318 ---------------------------ETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAM-GWDLGVMVGTS 293
A L +EM+ G N VT+ S+L AC+ G + +GRW+H + K + G + TS
Sbjct: 351 ALLLFQEML-RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 294 LVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPD 352
L+DMYAKCG I A VF ++ +++ +WNA++ G AMHG A D+F M + ++PD
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 353 AVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLV 412
+TF+ LLSACSHSG+++ GR FR + Y++ P++EHY CM+DLLG +G +EAE ++
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529
Query: 413 KKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVE 472
M + P+ V+ SLL +C HG ++L E L++++P N ++LLSN+YA +G+
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 589
Query: 473 KANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAG 532
+ R +L +G++KVPG SSI +D +H+F GDK HPR EIY L++M L AG
Sbjct: 590 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649
Query: 533 YVPNTTCQVLFGCSSSGDCTEALEEVEQ-----VLFAHSEKLALCFGLISTSSGSPLYIF 587
+VP+T +E L+E+E+ L HSEKLA+ FGLIST G+ L I
Sbjct: 650 FVPDT--------------SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 695
Query: 588 KNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
KNLR+C++CH A K+ S IYKREI+ RDR RFH F+ G CSC+DYW
Sbjct: 696 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 148/378 (39%), Gaps = 79/378 (20%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+Q+H G S NL + NA++ +Y+ C A LF+ +P +KD + + LI
Sbjct: 285 GRQVHLWIDDHGFGS--NLKIVNALIDLYSKCGELETACGLFERLP--YKDVISWNTLIG 340
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKF--GF 150
+ E+L LF EM + G + + LG ++G +H + K G
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 400
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
+ + +++D+Y K G + A +VF I S+ S
Sbjct: 401 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS----------------------- 437
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
W MI G+ +G +F L M G + + +T +LSACS SG + +
Sbjct: 438 --------WNAMIFGFAMHGRADASFDLFSRMR-KIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
GR H F + + T ++ Y ++ L
Sbjct: 489 GR--HIFRTMTQDYKM-----TPKLEHYG------------------------CMIDLLG 517
Query: 331 MHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
G+ K +M + E++PD V + +LL AC G VE G + E++ +I PE
Sbjct: 518 HSGLFKEAEEMI--NMMEMEPDGVIWCSLLKACKMHGNVELGESF---AENLIKIEPENP 572
Query: 391 -HYACMVDLLGRAGHLEE 407
Y + ++ AG E
Sbjct: 573 GSYVLLSNIYASAGRWNE 590
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/608 (35%), Positives = 345/608 (56%), Gaps = 54/608 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQ H A V G S ++F+ +A++ +Y+ C ARK+FDEIP+ ++ V +T++IR
Sbjct: 95 GKQTHQQAFVFGYQS--DIFVSSALIVMYSTCGKLEDARKVFDEIPK--RNIVSWTSMIR 150
Query: 97 ----RCPPLESLQLFIEM------RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVV 146
L+++ LF ++ + +D R+ + +HS V+
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 147 KFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRV 206
K GF + V N ++D Y K G +G GV R
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGG------------------------EG-----GVAVARK 241
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
+FD + +++ V++ ++ Y +G + EAF + + +V N +TL +VL A S SG
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVL 326
+ +G+ +H ++ MG + V+VGTS++DMY KCGR+ A F M +NV +W A++
Sbjct: 302 ALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMI 360
Query: 327 GGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI 385
G MHG +++FP M++ V+P+ +TF+++L+ACSH+GL +G ++F ++ + +
Sbjct: 361 AGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGV 420
Query: 386 RPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVR 445
P +EHY CMVDLLGRAG L++A L+++M ++P+ ++ SLL +C H ++LAE V
Sbjct: 421 EPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVA 480
Query: 446 ELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFS 505
L E+D N Y++LLS++YA +G+ + R ++K RG+ K PG S + ++G++H F
Sbjct: 481 RLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFL 540
Query: 506 AGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAH 565
GD+ HP+ +IY L ++ +L AGYV NT+ S D E EE E L H
Sbjct: 541 IGDEEHPQREKIYEFLAELNRKLLEAGYVSNTS-------SVCHDVDE--EEKEMTLRVH 591
Query: 566 SEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQG 625
SEKLA+ FG+++T GS + + KNLR+C DCH+ IK+ S I RE VVRD RFH FK G
Sbjct: 592 SEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDG 651
Query: 626 SCSCSDYW 633
CSC DYW
Sbjct: 652 GCSCGDYW 659
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 159/393 (40%), Gaps = 85/393 (21%)
Query: 94 LIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
L R E+L F MR+L L L D G Q H FG+
Sbjct: 51 LARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSD 110
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
V +A++ +Y G L +ARKVF EI ++VS
Sbjct: 111 IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS-------------------------- 144
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFE-----LNCVTLCSVLSACSQSGDV 268
WT MI GY NG +A L K+++ + L+ + L SV+SACS+
Sbjct: 145 -----WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAK 199
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGR--ISIALVVFKNMSRRNVVAWNAVL 326
+ +H F +K G+D GV VG +L+D YAK G +++A +F + ++ V++N+++
Sbjct: 200 GLTESIHSFVIK-RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIM 258
Query: 327 GGLAMHGMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSGL---------------- 368
A GM ++F +V+ V +A+T +L A SHSG
Sbjct: 259 SVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL 318
Query: 369 -------------------VEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAE 409
VE R+ F +++ + + M+ G GH +A
Sbjct: 319 EDDVIVGTSIIDMYCKCGRVETARKAFDRMKN-----KNVRSWTAMIAGYGMHGHAAKAL 373
Query: 410 LLVKKM---PIRPNEVVLGSLLGSCYAHGKLQL 439
L M +RPN + S+L +C +H L +
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAAC-SHAGLHV 405
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 164/393 (41%), Gaps = 69/393 (17%)
Query: 206 VVFDGMPERNEV-AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQ 264
+F+ ++ +V +W +I +G + EA M + C++ ACS
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI-KACSS 88
Query: 265 SGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNA 324
D+ G+ H A G+ + V ++L+ MY+ CG++ A VF + +RN+V+W +
Sbjct: 89 LFDIFSGKQTHQQAF-VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147
Query: 325 VLGGLAMHGMGKAVVDMFPH-MVEEVKPDAVTFM------ALLSACS-----------HS 366
++ G ++G V +F +V+E D F+ +++SACS HS
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 367 GLVEQG------------RQYFRDLESVYEIRPEI---------EHYACMVDLLGRAGHL 405
++++G Y + E + +I Y ++ + ++G
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 406 EEA----ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM---DPLNTEYH 458
EA LVK + N + L ++L + G L++ + I +++ M D +
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 459 ILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIY 518
I+ +MY G+VE A +K + +R M + Y +H +A + E++
Sbjct: 328 II--DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY---GMHGHAA------KALELF 376
Query: 519 LKLDDMICRLRLAGYVPN--TTCQVLFGCSSSG 549
+ D +G PN T VL CS +G
Sbjct: 377 PAMID-------SGVRPNYITFVSVLAACSHAG 402
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 242/642 (37%), Positives = 352/642 (54%), Gaps = 60/642 (9%)
Query: 38 KQLHAVATVTGLL-----SSPNLFLRNAILH--VYAACALPSHARKLFDEIPQSHKDSVD 90
K L A+ + GL + + F ILH + + ALP +AR+L P+ D+
Sbjct: 16 KNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALP-YARRLLLCFPEP--DAFM 72
Query: 91 YTALIR----RCPPLESLQLFIEMRQLGLSI-DXXXXXXXXXXXXRLGDPNVGPQVHSGV 145
+ L+R P S+ +F+EM + G D G Q+H
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 146 VKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVV------------------- 186
+K G V ++ +Y G + ARKVF E+ P++V
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAR 192
Query: 187 ------------SWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
SW V+L G +K +ES + +F MP R++V+W+ MIVG NG E
Sbjct: 193 EIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNE 252
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
+F +E+ G N V+L VLSACSQSG G+ +HGF KA G+ V V +L
Sbjct: 253 SFLYFRELQ-RAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA-GYSWIVSVNNAL 310
Query: 295 VDMYAKCGRISIALVVFKNMS-RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPD 352
+DMY++CG + +A +VF+ M +R +V+W +++ GLAMHG G+ V +F M V PD
Sbjct: 311 IDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPD 370
Query: 353 AVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLV 412
++F++LL ACSH+GL+E+G YF +++ VY I PEIEHY CMVDL GR+G L++A +
Sbjct: 371 GISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFI 430
Query: 413 KKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVE 472
+MPI P +V +LLG+C +HG ++LAE++ + L E+DP N+ +LLSN YA +GK +
Sbjct: 431 CQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWK 490
Query: 473 KANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLR-LA 531
S R+ + + I+K S + V +++F+AG+K E + KL ++I RL+ A
Sbjct: 491 DVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEA 550
Query: 532 GYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLR 591
GY P S+ D E EE E + HSEKLAL F L S G+ + I KNLR
Sbjct: 551 GYTPEVA-------SALYDVEE--EEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLR 601
Query: 592 ICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
IC+DCH+ +K+ S +Y EI+VRDR RFHSFK GSCSC DYW
Sbjct: 602 ICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/602 (34%), Positives = 343/602 (56%), Gaps = 46/602 (7%)
Query: 36 PGKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSH--KDSVDYTA 93
P L + + +PNLF+ N ++ ++ A PS A + ++ +S D++ +
Sbjct: 63 PTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPF 122
Query: 94 LIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
LI+ +E + VG Q HS +V+FGF
Sbjct: 123 LIKASSEMECVL-------------------------------VGEQTHSQIVRFGFQND 151
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
V N+++ +Y G + A ++FG++ VVSWT ++ G K VE+ R +FD MP
Sbjct: 152 VYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPH 211
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
RN W++MI GY N ++A L E + G N + SV+S+C+ G + G
Sbjct: 212 RNLFTWSIMINGYAKNNCFEKAIDLF-EFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
+ + VK+ + +++GT+LVDM+ +CG I A+ VF+ + + ++W++++ GLA+HG
Sbjct: 271 AYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHG 329
Query: 334 MGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
+ F M+ P VTF A+LSACSH GLVE+G + + +++ + I P +EHY
Sbjct: 330 HAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHY 389
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
C+VD+LGRAG L EAE + KM ++PN +LG+LLG+C + ++AE++ L+++ P
Sbjct: 390 GCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKP 449
Query: 453 LNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAG-DKSH 511
++ Y++LLSN+YA +G+ +K S R ++K++ ++K PG S I +DG++++F+ G D+ H
Sbjct: 450 EHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKH 509
Query: 512 PRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLAL 571
P +I K ++++ ++RL GY NT D E EE E + HSEKLA+
Sbjct: 510 PEMGKIRRKWEEILGKIRLIGYKGNTGDAFF-------DVDE--EEKESSIHMHSEKLAI 560
Query: 572 CFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSD 631
+G++ T G+ + I KNLR+C+DCH+ K+ S +Y RE++VRDR RFH F+ G CSC D
Sbjct: 561 AYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRD 620
Query: 632 YW 633
YW
Sbjct: 621 YW 622
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 350/641 (54%), Gaps = 59/641 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GKQ+H V+ V+GL + F++ ++ H+Y C ARK+FD + S KD V +AL+
Sbjct: 135 GKQIHCVSCVSGL--DMDAFVQGSMFHMYMRCGRMGDARKVFDRM--SDKDVVTCSALLC 190
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXR--------------------- 131
R+ E +++ EM G+ + R
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 132 -----------LGDP---NVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVF 177
+GD N+G +H V+K G K V +A++D+Y K G + +F
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 178 GEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEVAWTVMIVGYVGNGFTK 233
+ E+ + G+ + V+ +F+ E+ N V+WT +I G NG
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 234 EAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTS 293
EA L +EM G + N VT+ S+L AC + GR HGFAV+ D V VG++
Sbjct: 371 EALELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSA 428
Query: 294 LVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPD 352
L+DMYAKCGRI+++ +VF M +N+V WN+++ G +MHG K V+ +F ++ +KPD
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 353 AVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLV 412
++F +LLSAC GL ++G +YF+ + Y I+P +EHY+CMV+LLGRAG L+EA L+
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 413 KKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVE 472
K+MP P+ V G+LL SC + LAE +L ++P N ++LLSN+YA G
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 473 KANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAG 532
+ +S R ++ G++K PG S I V +++ AGDKSHP+ +I K+D++ +R +G
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Query: 533 YVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRI 592
+ PN + D E +E EQ+L+ HSEKLA+ FGL++T G+PL + KNLRI
Sbjct: 669 HRPNLDFAL-------HDVEE--QEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRI 719
Query: 593 CQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
C DCH+ IK S+ REI +RD RFH FK G CSC D+W
Sbjct: 720 CGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 192/457 (42%), Gaps = 52/457 (11%)
Query: 79 DEIPQSHKDSVDYT------ALIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRL 132
D + QS D Y+ AL + +S+ +F M GL D L
Sbjct: 70 DLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL 129
Query: 133 GDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVL 192
VG Q+H G V ++ +Y++ G +G+ARKVF + VV+ + +L
Sbjct: 130 SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALL 189
Query: 193 DGVVKWEGVESGRVVFDGMP----ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGF 248
+ +E + M E N V+W ++ G+ +G+ KEA + ++ + GF
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK-IHHLGF 248
Query: 249 ELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIAL 308
+ VT+ SVL + S + +GR +HG+ +K G V ++++DMY K G + +
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK-QGLLKDKCVISAMIDMYGKSGHVYGII 307
Query: 309 VVFKN---------------MSRR--------------------NVVAWNAVLGGLAMHG 333
+F +SR NVV+W +++ G A +G
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Query: 334 MGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
+++F M V VKP+ VT ++L AC + + GR V+ + +
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVG 426
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV--EM 450
+ ++D+ + G + ++++ MP + N V SL+ HGK + I L+ +
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIR 487
P + LLS + E F+ + ++ GI+
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/602 (35%), Positives = 347/602 (57%), Gaps = 19/602 (3%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTA--L 94
G++++A +G+ N + +A++ +Y C A++LFDE S+ D + A
Sbjct: 255 GEKVYAFIRNSGI--EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNY 312
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
+R+ E+L +F M G+ D +L + G H V++ GF
Sbjct: 313 VRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD 372
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
+CNA++D+Y+K A ++F + +VV+W ++ G V+ V++ F+ MPE+
Sbjct: 373 NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK 432
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
N V+W +I G V +EA + M G + VT+ S+ SAC G + + +W+
Sbjct: 433 NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWI 492
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
+ + ++ G L V +GT+LVDM+++CG A+ +F +++ R+V AW A +G +AM G
Sbjct: 493 Y-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 335 GKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYA 393
+ +++F M+E+ +KPD V F+ L+ACSH GLV+QG++ F + ++ + PE HY
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 394 CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPL 453
CMVDLLGRAG LEEA L++ MP+ PN+V+ SLL +C G +++A ++ + P
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 454 NTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPR 513
T ++LLSN+YA +G+ R +K++G+RK PG SSI + G+ H+F++GD+SHP
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 514 TSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQV--LFAHSEKLAL 571
I LD++ R G+VP+ + VL ++E E++ L HSEKLA+
Sbjct: 732 MPNIEAMLDEVSQRASHLGHVPDLS-NVLMD----------VDEKEKIFMLSRHSEKLAM 780
Query: 572 CFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSD 631
+GLIS++ G+ + I KNLR+C DCHS K AS +Y REI++RD RFH +QG CSC D
Sbjct: 781 AYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGD 840
Query: 632 YW 633
+W
Sbjct: 841 FW 842
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 38/299 (12%)
Query: 72 SHARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXX 127
S A+++F E +S+ Y +LIR E++ LF+ M G+S D
Sbjct: 84 SFAKEVF-ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 128 XXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVS 187
+ G Q+H +VK G+ K V N+++ Y + G L ARKVF
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF---------- 192
Query: 188 WTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCG 247
D M ERN V+WT MI GY F K+A L MV
Sbjct: 193 ---------------------DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 248 FELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
N VT+ V+SAC++ D+ G V+ F ++ G ++ ++ ++LVDMY KC I +A
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 308 LVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSH 365
+F N+ NA+ G+ + + +F M++ V+PD ++ ++ +S+CS
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 219 WTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFA 278
+ +I GY +G EA L M+ G + T LSAC++S G +HG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 279 VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAV 338
VK MG+ + V SLV YA+CG + A VF MS RNVV+W +++ G A K
Sbjct: 161 VK-MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 339 VDMFPHMV--EEVKPDAVTFMALLSACSHSGLVEQGRQYF 376
VD+F MV EEV P++VT + ++SAC+ +E G + +
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/603 (36%), Positives = 324/603 (53%), Gaps = 51/603 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G +H+ + GL S LF+ N ++ +YA +K+FD + +D + + ++I+
Sbjct: 266 GVTIHSYSIKHGLESE--LFVSNKLIDLYAEFGRLRDCQKVFDRMYV--RDLISWNSIIK 321
Query: 97 RCP----PLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG-FG 151
PL ++ LF EMR + D +LGD V ++ G F
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ + NAV+ +Y K GL V+S R VF+ +
Sbjct: 382 EDITIGNAVVVMYAKLGL-------------------------------VDSARAVFNWL 410
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
P + ++W +I GY NGF EA + M N T SVL ACSQ+G + G
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+HG +K G L V V TSL DMY KCGR+ AL +F + R N V WN ++
Sbjct: 471 MKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529
Query: 332 HGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
HG G+ V +F M++E VKPD +TF+ LLSACSHSGLV++G+ F +++ Y I P ++
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HY CMVD+ GRAG LE A +K M ++P+ + G+LL +C HG + L + L E+
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
+P + YH+LLSNMYA +GK E + R + +G+RK PG SS+ VD ++ F G+++
Sbjct: 650 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 709
Query: 511 HPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLA 570
HP E+Y +L + +L++ GYVP+ F D +E E +L +HSE+LA
Sbjct: 710 HPMYEEMYRELTALQAKLKMIGYVPDHR----FVLQDVED-----DEKEHILMSHSERLA 760
Query: 571 LCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCS 630
+ F LI+T + + + IFKNLR+C DCHS K S I +REI+VRD RFH FK G CSC
Sbjct: 761 IAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCG 820
Query: 631 DYW 633
DYW
Sbjct: 821 DYW 823
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 206/436 (47%), Gaps = 54/436 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G ++H +A G + ++++ +++H+Y+ +AR LFDE+P +D + A+I
Sbjct: 169 GNKIHCLALKFGFMW--DVYVAASLIHLYSRYKAVGNARILFDEMPV--RDMGSWNAMIS 224
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ E+L L +R ++D GD N G +HS +K G
Sbjct: 225 GYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N ++DLY +FG L + +KVF D M
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDCQKVF-------------------------------DRMY 309
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
R+ ++W +I Y N A L +EM + +C+TL S+ S SQ GD+ R
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLS-RIQPDCLTLISLASILSQLGDIRACR 368
Query: 273 WVHGFAVKAMGWDL-GVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
V GF ++ GW L + +G ++V MYAK G + A VF + +V++WN ++ G A
Sbjct: 369 SVQGFTLRK-GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 332 HGMGKAVVDMFPHMVE--EVKPDAVTFMALLSACSHSGLVEQG-RQYFRDLESVYEIRPE 388
+G ++M+ M E E+ + T++++L ACS +G + QG + + R L++ + +
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLD 485
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
+ + D+ G+ G LE+A L ++P R N V +L+ HG + A + +E++
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 449 E--MDPLNTEYHILLS 462
+ + P + + LLS
Sbjct: 545 DEGVKPDHITFVTLLS 560
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 10/220 (4%)
Query: 200 GVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVL 259
V R FD + R+ AW +MI GY G + E + G + T SVL
Sbjct: 101 NVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL 160
Query: 260 SACSQSGDVCVGRWVHGFAVK-AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRN 318
AC D G +H A+K WD V V SL+ +Y++ + A ++F M R+
Sbjct: 161 KACRTVID---GNKIHCLALKFGFMWD--VYVAASLIHLYSRYKAVGNARILFDEMPVRD 215
Query: 319 VVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
+ +WNA++ G G K + + + D+VT ++LLSAC+ +G +G
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSNGL---RAMDSVTVVSLLSACTEAGDFNRGVT-IHS 271
Query: 379 LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
+ + E+ ++DL G L + + + +M +R
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/601 (35%), Positives = 346/601 (57%), Gaps = 19/601 (3%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTA--L 94
G++++A +G+ N + +A++ +Y C A++LFDE S+ D + A
Sbjct: 255 GEKVYAFIRNSGI--EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNY 312
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
+R+ E+L +F M G+ D +L + G H V++ GF
Sbjct: 313 VRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD 372
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
+CNA++D+Y+K A ++F + +VV+W ++ G V+ V++ F+ MPE+
Sbjct: 373 NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK 432
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
N V+W +I G V +EA + M G + VT+ S+ SAC G + + +W+
Sbjct: 433 NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWI 492
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
+ + ++ G L V +GT+LVDM+++CG A+ +F +++ R+V AW A +G +AM G
Sbjct: 493 Y-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 335 GKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYA 393
+ +++F M+E+ +KPD V F+ L+ACSH GLV+QG++ F + ++ + PE HY
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 394 CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPL 453
CMVDLLGRAG LEEA L++ MP+ PN+V+ SLL +C G +++A ++ + P
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 454 NTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPR 513
T ++LLSN+YA +G+ R +K++G+RK PG SSI + G+ H+F++GD+SHP
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 514 TSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQV--LFAHSEKLAL 571
I LD++ R G+VP+ + VL ++E E++ L HSEKLA+
Sbjct: 732 MPNIEAMLDEVSQRASHLGHVPDLS-NVLMD----------VDEKEKIFMLSRHSEKLAM 780
Query: 572 CFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSD 631
+GLIS++ G+ + I KNLR+C DCHS K AS +Y REI++RD RFH +QG CSC D
Sbjct: 781 AYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGD 840
Query: 632 Y 632
+
Sbjct: 841 F 841
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 38/299 (12%)
Query: 72 SHARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXX 127
S A+++F E +S+ Y +LIR E++ LF+ M G+S D
Sbjct: 84 SFAKEVF-ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 128 XXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVS 187
+ G Q+H +VK G+ K V N+++ Y + G L ARKVF
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF---------- 192
Query: 188 WTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCG 247
D M ERN V+WT MI GY F K+A L MV
Sbjct: 193 ---------------------DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 248 FELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
N VT+ V+SAC++ D+ G V+ F ++ G ++ ++ ++LVDMY KC I +A
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 308 LVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSH 365
+F N+ NA+ G+ + + +F M++ V+PD ++ ++ +S+CS
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 219 WTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFA 278
+ +I GY +G EA L M+ G + T LSAC++S G +HG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 279 VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAV 338
VK MG+ + V SLV YA+CG + A VF MS RNVV+W +++ G A K
Sbjct: 161 VK-MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 339 VDMFPHMV--EEVKPDAVTFMALLSACSHSGLVEQGRQYF 376
VD+F MV EEV P++VT + ++SAC+ +E G + +
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/603 (34%), Positives = 323/603 (53%), Gaps = 52/603 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+QLHA++ TG S + + N IL Y+ R LFDE+P+ D V Y +I
Sbjct: 269 GQQLHALSVTTGF--SRDASVGNQILDFYSKHDRVLETRMLFDEMPE--LDFVSYNVVIS 324
Query: 97 RCPPLE----SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ SL F EM+ +G L +G Q+H +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N+++D+Y K + EA ++F +P
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAE-------------------------------LIFKSLP 413
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+R V+WT +I GYV G L +M G + T +VL A + + +G+
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMR-GSNLRADQSTFATVLKASASFASLLLGK 472
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H F +++ + V G+ LVDMYAKCG I A+ VF+ M RN V+WNA++ A +
Sbjct: 473 QLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G G+A + F M+E ++PD+V+ + +L+ACSH G VEQG +YF+ + +Y I P+ +H
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
YACM+DLLGR G EAE L+ +MP P+E++ S+L +C H LAE+ +L M+
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651
Query: 452 PL-NTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
L + ++ +SN+YA +G+ EK ++ +++RGI+KVP S + V+ ++H FS+ D++
Sbjct: 652 KLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQT 711
Query: 511 HPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLA 570
HP EI K++++ + GY P+T+ V D E + ++E + + HSE+LA
Sbjct: 712 HPNGDEIVRKINELTAEIEREGYKPDTSSVV-------QDVDEQM-KIESLKY-HSERLA 762
Query: 571 LCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCS 630
+ F LIST G P+ + KNLR C+DCH+AIK+ S I KREI VRD RFH F +G CSC
Sbjct: 763 VAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCG 822
Query: 631 DYW 633
DYW
Sbjct: 823 DYW 825
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 5/227 (2%)
Query: 140 QVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWE 199
+V + ++K GF T N +++ ++ G + ARKV+ E+ + VS ++ G VK
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 200 GVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFEL-NCVTLCSV 258
V S R +FD MP+R V WT+++ Y N EAF L ++M L + VT ++
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 259 LSACSQSGDVCVGRWVHGFAVKAMGWDLG--VMVGTSLVDMYAKCGRISIALVVFKNMSR 316
L C+ + VH FAVK +G+D + V L+ Y + R+ +A V+F+ +
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVK-LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSA 362
++ V +N ++ G G+ + +F M + +P TF +L A
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/605 (35%), Positives = 335/605 (55%), Gaps = 52/605 (8%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALP--SHARKLFDEIPQSHKDSVDYTALI 95
+Q+HA + G+ S ++ I ++ + + P S+A K+F +I + + + LI
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI-WNTLI 92
Query: 96 RRCP----PLESLQLFIEMRQLGL-SIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
R + + L+ EMR GL D + D +G +HS V++ GF
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
G V N+++ LY G + A KVF ++ +V+W V++
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN----------------- 195
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
G+ NG +EA L EM G + + T+ S+LSAC++ G + +
Sbjct: 196 --------------GFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
G+ VH + +K +G + L+D+YA+CGR+ A +F M +N V+W +++ GLA
Sbjct: 241 GKRVHVYMIK-VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 331 MHGMGKAVVDMFPHM--VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
++G GK +++F +M E + P +TF+ +L ACSH G+V++G +YFR + Y+I P
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 359
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
IEH+ CMVDLL RAG +++A +K MP++PN V+ +LLG+C HG LAE +++
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQIL 419
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
+++P ++ ++LLSNMYA + R+ + + G++KVPG S + V ++H+F GD
Sbjct: 420 QLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGD 479
Query: 509 KSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEK 568
KSHP++ IY KL +M RLR GYVP + + D E EE E + HSEK
Sbjct: 480 KSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV-------DVEE--EEKENAVVYHSEK 530
Query: 569 LALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCS 628
+A+ F LIST SP+ + KNLR+C DCH AIK+ S +Y REIVVRDR RFH FK GSCS
Sbjct: 531 IAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCS 590
Query: 629 CSDYW 633
C DYW
Sbjct: 591 CQDYW 595
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 139/307 (45%), Gaps = 50/307 (16%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ +H+V +G S ++++N++LH+YA C + A K+FD++P+ KD V + ++I
Sbjct: 140 GETIHSVVIRSGFGSL--IYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNSVIN 195
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
P E+L L+ EM G+ D ++G +G +VH ++K G +
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
N ++DLY + G + EA+ +F E M
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDE-------------------------------MV 284
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG- 271
++N V+WT +IVG NGF KEA L K M G +T +L ACS G V G
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 272 ----RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR-NVVAWNAVL 326
R + ++ G M VD+ A+ G++ A K+M + NVV W +L
Sbjct: 345 EYFRRMREEYKIEPRIEHFGCM-----VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Query: 327 GGLAMHG 333
G +HG
Sbjct: 400 GACTVHG 406
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/586 (36%), Positives = 325/586 (55%), Gaps = 47/586 (8%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDEIPQSHKD--SVDYTA--LIRRCPPLESLQLFI 108
P LF N+++ + +P + + I S D +YT L++ C L
Sbjct: 69 PTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLR------ 122
Query: 109 EMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFG 168
MR+ GL QVH ++ GF V ++ LY + G
Sbjct: 123 -MRETGL------------------------QVHGMTIRRGFDNDPHVQTGLISLYAELG 157
Query: 169 LLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVG 228
L KVF I P V T ++ + V R +F+GMPER+ +AW MI GY
Sbjct: 158 CLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQ 217
Query: 229 NGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGV 288
G ++EA + M G ++N V + SVLSAC+Q G + GRW H + ++ + V
Sbjct: 218 VGESREALNVFHLMQLE-GVKVNGVAMISVLSACTQLGALDQGRWAHSY-IERNKIKITV 275
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE 348
+ T+LVD+YAKCG + A+ VF M +NV W++ L GLAM+G G+ +++F M ++
Sbjct: 276 RLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQD 335
Query: 349 -VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEE 407
V P+AVTF+++L CS G V++G+++F + + + I P++EHY C+VDL RAG LE+
Sbjct: 336 GVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLED 395
Query: 408 AELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYAL 467
A ++++MP++P+ V SLL + + L+L ++++E++ N ++LLSN+YA
Sbjct: 396 AVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYAD 455
Query: 468 SGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICR 527
S + + R+ +K +G+RK PG S + V+G++H+F GDKSHP+ ++I D+ R
Sbjct: 456 SNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRR 515
Query: 528 LRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIF 587
LRLAGY +TT V+F D E EE E L HSEK A+ FG++S P+ I
Sbjct: 516 LRLAGYKADTT-PVMF------DIDE--EEKEDALCLHSEKAAIAFGIMSLKEDVPIRIV 566
Query: 588 KNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
KNLR+C DCH + S I+ REI+VRDR RFH FK G CSC+ +W
Sbjct: 567 KNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/477 (40%), Positives = 292/477 (61%), Gaps = 12/477 (2%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
NA++ YV+ + A+++F + +V +W ++ G + + + +FD MP+R+ V
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
+W MI GY +G + EA L +M G LN + S LS C+ + +G+ +HG
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 278 AVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKA 337
VK G++ G VG +L+ MY KCG I A +FK M+ +++V+WN ++ G + HG G+
Sbjct: 435 LVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 338 VVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMV 396
+ F M E +KPD T +A+LSACSH+GLV++GRQYF + Y + P +HYACMV
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
Query: 397 DLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTE 456
DLLGRAG LE+A L+K MP P+ + G+LLG+ HG +LAE ++ M+P N+
Sbjct: 554 DLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSG 613
Query: 457 YHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSE 516
++LLSN+YA SG+ R ++ +G++KVPG S I + + H FS GD+ HP E
Sbjct: 614 MYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDE 673
Query: 517 IYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLI 576
I+ L+++ R++ AGYV T+ VL D E EE E+++ HSE+LA+ +G++
Sbjct: 674 IFAFLEELDLRMKKAGYVSKTSV-VLH------DVEE--EEKERMVRYHSERLAVAYGIM 724
Query: 577 STSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
SSG P+ + KNLR+C+DCH+AIK + I R I++RD RFH FK GSCSC DYW
Sbjct: 725 RVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 158/334 (47%), Gaps = 36/334 (10%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
N + Y++ G EA +VF + S VS+ ++ G ++ E R +FD MPER+ V
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 218 AWTVMIVGYVGN---GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
+W VMI GYV N G +E F ++ E + + ++LS +Q+G V R V
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMPER--------DVCSWNTMLSGYAQNGCVDDARSV 179
Query: 275 HGFAVKA--MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+ + W+ +L+ Y + ++ A ++FK+ +V+WN +LGG
Sbjct: 180 FDRMPEKNDVSWN-------ALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 333 GMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
K +V+ D V++ +++ + SG +++ RQ F D V ++ +
Sbjct: 233 ---KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF-DESPVQDVFT----W 284
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
MV + +EEA L KMP R NEV ++L ++++A +EL ++ P
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPER-NEVSWNAMLAGYVQGERMEMA----KELFDVMP 339
Query: 453 LN--TEYHILLSNMYALSGKVEKANSFRRVLKKR 484
+ ++ +++ YA GK+ +A + + KR
Sbjct: 340 CRNVSTWNTMITG-YAQCGKISEAKNLFDKMPKR 372
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 138/301 (45%), Gaps = 27/301 (8%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
N ++ Y++ G ARK+F E+ +VSW V++ G V+ + R +F+ MPER+
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG---DVCVGRWV 274
+W M+ GY NG +A VF E N V+ ++LSA Q+ + C+
Sbjct: 159 SWNTMLSGYAQNGCVDDA-----RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM---- 209
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
W L + L+ + K +I A F +M+ R+VV+WN ++ G A G
Sbjct: 210 --LFKSRENWAL--VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK 265
Query: 335 GKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYAC 394
+F E D T+ A++S + +VE+ R+ F + E+ +
Sbjct: 266 IDEARQLFD---ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV-----SWNA 317
Query: 395 MVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAH-GKLQLAEKIVRELVEMDPL 453
M+ + +E A+ L MP R V + + + YA GK+ A+ + ++ + DP+
Sbjct: 318 MLAGYVQGERMEMAKELFDVMPCR--NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 454 N 454
+
Sbjct: 376 S 376
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 146/354 (41%), Gaps = 50/354 (14%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+++ + ++ N+ N ++ YA C S A+ LFD++P+ +D V + A+I
Sbjct: 325 GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK--RDPVSWAAMIA 382
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ E+L+LF++M + G ++ + +G Q+H +VK G+
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V NA++ +Y K G + EA +F E+ +VSW
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWN----------------------- 479
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
MI GY +GF + A + M G + + T+ +VLSACS +G V GR
Sbjct: 480 --------TMIAGYSRHGFGEVALRFFESMKRE-GLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 273 WVHGFAVKAMGWDLGVMVGTS----LVDMYAKCGRISIALVVFKNMS-RRNVVAWNAVLG 327
M D GVM + +VD+ + G + A + KNM + W +LG
Sbjct: 531 QY----FYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 328 GLAMHG---MGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
+HG + + D M E V L ++ G V + R RD
Sbjct: 587 ASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/604 (35%), Positives = 332/604 (54%), Gaps = 53/604 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+++HA T L P +LR +L Y C ARK+ DE+P+ K+ V +TA+I
Sbjct: 71 GQRVHAHMIKTRYL--PATYLRTRLLIFYGKCDCLEDARKVLDEMPE--KNVVSWTAMIS 126
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R E+L +F EM + + R +G Q+H +VK+ +
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V ++++D+Y K G + EAR++ F+ +P
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREI-------------------------------FECLP 215
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
ER+ V+ T +I GY G +EA + + G N VT S+L+A S + G+
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRL-HSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
H ++ ++ SL+DMY+KCG +S A +F NM R ++WNA+L G + H
Sbjct: 275 QAHCHVLRR-ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKH 333
Query: 333 GMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDL-ESVYEIRPEI 389
G+G+ V+++F M +E VKPDAVT +A+LS CSH + + G F + Y +P
Sbjct: 334 GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGT 393
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE 449
EHY C+VD+LGRAG ++EA +K+MP +P VLGSLLG+C H + + E + R L+E
Sbjct: 394 EHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIE 453
Query: 450 MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDK 509
++P N +++LSN+YA +G+ N+ R ++ ++ + K PG S I + LH F A D+
Sbjct: 454 IEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDR 513
Query: 510 SHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKL 569
+HPR E+ K+ ++ +++ AGYVP+ +C VL+ D E E+ E++L HSEKL
Sbjct: 514 THPRREEVLAKMKEISIKMKQAGYVPDLSC-VLY------DVDE--EQKEKMLLGHSEKL 564
Query: 570 ALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSC 629
AL FGLI+T G P+ +FKNLRIC DCH+ KI S +++RE+ +RD+ RFH G CSC
Sbjct: 565 ALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSC 624
Query: 630 SDYW 633
DYW
Sbjct: 625 GDYW 628
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/602 (34%), Positives = 330/602 (54%), Gaps = 52/602 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK++H A +G S N+ A++ +YA C AR+LFD + + ++ V + ++I
Sbjct: 255 GKEIHGYAMRSGFDSLVNI--STALVDMYAKCGSLETARQLFDGMLE--RNVVSWNSMID 310
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ P E++ +F +M G+ LGD G +H V+ G +
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N+++ +Y K + A +FG+++
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQ------------------------------- 399
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
R V+W MI+G+ NG +A +M + + T SV++A ++ +
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMR-SRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
W+HG +++ D V V T+LVDMYAKCG I IA ++F MS R+V WNA++ G H
Sbjct: 459 WIHGVVMRSC-LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTH 517
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G GKA +++F M + +KP+ VTF++++SACSHSGLVE G + F ++ Y I ++H
Sbjct: 518 GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDH 577
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
Y MVDLLGRAG L EA + +MP++P V G++LG+C H + AEK L E++
Sbjct: 578 YGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 637
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P + YH+LL+N+Y + EK R + ++G+RK PG S + + ++H F +G +H
Sbjct: 638 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 697
Query: 512 PRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLAL 571
P + +IY L+ +IC ++ AGYVP+T ++ G + + EQ+L HSEKLA+
Sbjct: 698 PDSKKIYAFLEKLICHIKEAGYVPDT--NLVLGVEN--------DVKEQLLSTHSEKLAI 747
Query: 572 CFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSD 631
FGL++T++G+ +++ KNLR+C DCH+A K S + REIVVRD RFH FK G+CSC D
Sbjct: 748 SFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGD 807
Query: 632 YW 633
YW
Sbjct: 808 YW 809
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 157/342 (45%), Gaps = 42/342 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK++H + +G S +LF + ++YA C + ARK+FD +P+ +D V + ++
Sbjct: 154 GKEIHGLLVKSGF--SLDLFAMTGLENMYAKCRQVNEARKVFDRMPE--RDLVSWNTIVA 209
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ +L++ M + L L +VG ++H ++ GF
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ A++D+Y K G L AR++F + +VVSW ++D
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID------------------- 310
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
YV N KEA + ++M+ G + V++ L AC+ GD+ GR
Sbjct: 311 ------------AYVQNENPKEAMLIFQKML-DEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
++H +V+ +G D V V SL+ MY KC + A +F + R +V+WNA++ G A +
Sbjct: 358 FIHKLSVE-LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 333 GMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGR 373
G ++ F M VKPD T++++++A + + +
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 6/221 (2%)
Query: 197 KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
++ V+ VF+ + + V + M+ G+ +A M + E
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD-DVEPVVYNFT 139
Query: 257 SVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR 316
+L C ++ VG+ +HG VK+ G+ L + T L +MYAKC +++ A VF M
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKS-GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE 198
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQ- 374
R++V+WN ++ G + +GM + ++M M EE +KP +T +++L A S L+ G++
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 375 YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM 415
+ + S ++ I +VD+ + G LE A L M
Sbjct: 259 HGYAMRSGFDSLVNIS--TALVDMYAKCGSLETARQLFDGM 297
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/599 (35%), Positives = 316/599 (52%), Gaps = 48/599 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G Q+H++AT TG S ++ + +Y+ C LF E + D V Y A+I
Sbjct: 240 GMQIHSLATKTGCYSHD--YVLTGFISLYSKCGKIKMGSALFREFRK--PDIVAYNAMIH 295
Query: 97 RCPPLESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTR 155
+L + + ++L LS G + +H +K F
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHAS 355
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERN 215
V A+ +Y K +ES R +FD PE++
Sbjct: 356 VSTALTTVYSKLN-------------------------------EIESARKLFDESPEKS 384
Query: 216 EVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVH 275
+W MI GY NG T++A L +EM F N VT+ +LSAC+Q G + +G+WVH
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQ-KSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 276 GFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMG 335
V++ ++ + V T+L+ MYAKCG I+ A +F M+++N V WN ++ G +HG G
Sbjct: 444 DL-VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG 502
Query: 336 KAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYAC 394
+ +++F M+ + P VTF+ +L ACSH+GLV++G + F + Y P ++HYAC
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562
Query: 395 MVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLN 454
MVD+LGRAGHL+ A ++ M I P V +LLG+C H LA + +L E+DP N
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDN 622
Query: 455 TEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRT 514
YH+LLSN+++ +A + R+ KKR + K PG + I + H F++GD+SHP+
Sbjct: 623 VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQV 682
Query: 515 SEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFG 574
EIY KL+ + ++R AGY P T + D E EE E ++ HSE+LA+ FG
Sbjct: 683 KEIYEKLEKLEGKMREAGYQPETELAL-------HDVEE--EERELMVKVHSERLAIAFG 733
Query: 575 LISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
LI+T G+ + I KNLR+C DCH+ K+ S I +R IVVRD RFH FK G CSC DYW
Sbjct: 734 LIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 141/322 (43%), Gaps = 35/322 (10%)
Query: 197 KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
K+ VE R VFD MPE++ + W MI GY N E+ + ++++ L+ TL
Sbjct: 166 KFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLL 225
Query: 257 SVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR 316
+L A ++ ++ +G +H A K + ++ T + +Y+KCG+I + +F+ +
Sbjct: 226 DILPAVAELQELRLGMQIHSLATKTGCYSHDYVL-TGFISLYSKCGKIKMGSALFREFRK 284
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPH-MVEEVKPDAVTFMALLSACSHSGLVEQGRQY 375
++VA+NA++ G +G + + +F M+ + + T ++L+ H L+ Y
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGY 344
Query: 376 ------------FRDLESVYEIRPEIE---------------HYACMVDLLGRAGHLEEA 408
L +VY EIE + M+ + G E+A
Sbjct: 345 CLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 404
Query: 409 ELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHI--LLSN 463
L ++M PN V + +L +C G L L K V +LV + ++ L
Sbjct: 405 ISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIG 463
Query: 464 MYALSGKVEKANSFRRVLKKRG 485
MYA G + +A ++ K+
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKN 485
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 127/317 (40%), Gaps = 48/317 (15%)
Query: 140 QVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWE 199
Q H+ ++ GF + + G + AR +F ++ P V + V++ G E
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 200 GVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVL 259
S VF + + ++ + N T +
Sbjct: 98 SPHSSLSVFAHLRKSTDL-------------------------------KPNSSTYAFAI 126
Query: 260 SACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV 319
SA S D GR +HG AV G D +++G+++V MY K R+ A VF M ++
Sbjct: 127 SAASGFRDDRAGRVIHGQAV-VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFR 377
+ WN ++ G + M + +F ++ E + D T + +L A + + G Q
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ--- 242
Query: 378 DLESVYEIRPEIEHYA------CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSC 431
++ + + Y+ + L + G ++ L ++ +P+ V +++
Sbjct: 243 ----IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGY 297
Query: 432 YAHGKLQLAEKIVRELV 448
++G+ +L+ + +EL+
Sbjct: 298 TSNGETELSLSLFKELM 314
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/635 (35%), Positives = 344/635 (54%), Gaps = 51/635 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEI--------------- 81
GK++H+ GL N+ + N++L++YA C P A+ +FD +
Sbjct: 165 GKKVHSFIVKLGL--RGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALH 222
Query: 82 --------------PQSHKDSVDYTALI----RRCPPLESLQLFIEM-RQLGLSIDXXXX 122
+ +D V + ++I +R L +L +F +M R LS D
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTL 282
Query: 123 XXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGE--I 180
L +G Q+HS +V GF V NA++ +Y + G + AR++ +
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 181 EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLK 240
+ + +T +LDG +K + + +F + +R+ VAWT MIVGY +G EA L +
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 241 EMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAK 300
MV G G N TL ++LS S + G+ +HG AVK+ G V V +L+ MYAK
Sbjct: 403 SMV-GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAK 460
Query: 301 CGRISIALVVFKNMS-RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMA 358
G I+ A F + R+ V+W +++ LA HG + +++F M+ E ++PD +T++
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 359 LLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
+ SAC+H+GLV QGRQYF ++ V +I P + HYACMVDL GRAG L+EA+ ++KMPI
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 419 PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFR 478
P+ V GSLL +C H + L + L+ ++P N+ + L+N+Y+ GK E+A R
Sbjct: 581 PDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIR 640
Query: 479 RVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTT 538
+ +K ++K G S I V ++H F D +HP +EIY+ + + ++ GYVP+T
Sbjct: 641 KSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDT- 699
Query: 539 CQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHS 598
S D E ++ EQ+L HSEKLA+ FGLIST + L I KNLR+C DCH+
Sbjct: 700 ------ASVLHDLEEEVK--EQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHT 751
Query: 599 AIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
AIK S + REI+VRD RFH FK G CSC DYW
Sbjct: 752 AIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 187/390 (47%), Gaps = 49/390 (12%)
Query: 141 VHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEG 200
VH V+K G + N +M++Y K G ARK+F E+ + + SW VL K
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
++S FD +P+R+ V+WT MIVGY G +A ++ +MV G E TL +VL+
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV-KEGIEPTQFTLTNVLA 154
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
+ + + + G+ VH F VK +G V V SL++MYAKCG +A VF M R++
Sbjct: 155 SVAATRCMETGKKVHSFIVK-LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLE 380
+WNA++ G + F M E D VT+ +++S + G
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAER---DIVTWNSMISGFNQRG------------- 257
Query: 381 SVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLA 440
Y++R +D+ + +++ + P+ L S+L +C KL +
Sbjct: 258 --YDLRA--------LDIFSK---------MLRDSLLSPDRFTLASVLSACANLEKLCIG 298
Query: 441 EKIVRELVE--MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIR--KVPGMSSIY 496
++I +V D + L+S MY+ G VE A RR++++RG + K+ G +++
Sbjct: 299 KQIHSHIVTTGFDISGIVLNALIS-MYSRCGGVETA---RRLIEQRGTKDLKIEGFTAL- 353
Query: 497 VDGQLHQFSAGDKSHPRTSEIYLKLDDMIC 526
+DG + GD + + + LK D++
Sbjct: 354 LDGYI---KLGDMNQAKNIFVSLKDRDVVA 380
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/541 (22%), Positives = 223/541 (41%), Gaps = 106/541 (19%)
Query: 40 LHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQS--------------- 84
+H +GL+ S ++L N +++VY+ HARKLFDE+P
Sbjct: 36 VHCRVIKSGLMFS--VYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKR 93
Query: 85 --------------HKDSVDYTALIRRCPPL----ESLQLFIEMRQLGLSIDXXXXXXXX 126
+DSV +T +I + +++++ +M + G+
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 127 XXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVV 186
G +VHS +VK G V N+++++Y K G A+ VF + V +
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 187 SWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGC 246
SW ++ ++ ++ F+ M ER+ V W MI G+ G+ A + +M+
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
+ TL SVLSAC+ +C+G+ +H V G+D+ +V +L+ MY++CG +
Sbjct: 274 LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT-GFDISGIVLNALISMYSRCGGVET 332
Query: 307 A--LV-------------------------------VFKNMSRRNVVAWNAVLGGLAMHG 333
A L+ +F ++ R+VVAW A++ G HG
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 334 MGKAVVDMFPHMV-EEVKPDAVTFMALLSACS-----------HSGLVEQGRQY----FR 377
+++F MV +P++ T A+LS S H V+ G Y
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452
Query: 378 DLESVYE--------------IRPEIE--HYACMVDLLGRAGHLEEAELLVKKM---PIR 418
L ++Y IR E + + M+ L + GH EEA L + M +R
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512
Query: 419 PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPL--NTEYHILLSNMYALSGKVEKANS 476
P+ + + +C G + + + ++D + ++ + +++ +G +++A
Sbjct: 513 PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Query: 477 F 477
F
Sbjct: 573 F 573
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/601 (35%), Positives = 328/601 (54%), Gaps = 49/601 (8%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEI--PQSHKDSVDYTALI 95
K++HA+ TG +L + +L +AR++FDE+ P+ + + +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQ--LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 96 RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTR 155
R P ESL L+ +MR LG+ D +LGD + G +H+ VVK+GFG
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERN 215
V ++ +Y+KFG L S +F+ M ++
Sbjct: 146 VATELVMMYMKFGELS-------------------------------SAEFLFESMQVKD 174
Query: 216 EVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVH 275
VAW + V G + A +M + + T+ S+LSAC Q G + +G ++
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMC-ADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
Query: 276 GFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMG 335
A K D ++V + +DM+ KCG A V+F+ M +RNVV+W+ ++ G AM+G
Sbjct: 234 DRARKE-EIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDS 292
Query: 336 KAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDL--ESVYEIRPEIEHY 392
+ + +F M E ++P+ VTF+ +LSACSH+GLV +G++YF + + + P EHY
Sbjct: 293 REALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHY 352
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
ACMVDLLGR+G LEEA +KKMP+ P+ + G+LLG+C H + L +K+ LVE P
Sbjct: 353 ACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAP 412
Query: 453 LNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHP 512
YH+LLSN+YA +GK + + R ++K G +KV SS+ +G++H F+ GDKSHP
Sbjct: 413 DIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHP 472
Query: 513 RTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALC 572
++ IY KLD+++ ++R GYVP+T CS D +EE E L HSEKLA+
Sbjct: 473 QSKAIYEKLDEILKKIRKMGYVPDT-------CSVFHDVE--MEEKECSLSHHSEKLAIA 523
Query: 573 FGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDY 632
FGLI G P+ + KNLR C DCH+ K S++ EI++RD+ RFH F+ G CSC ++
Sbjct: 524 FGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEF 583
Query: 633 W 633
W
Sbjct: 584 W 584
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/616 (36%), Positives = 331/616 (53%), Gaps = 62/616 (10%)
Query: 38 KQLHAVATVTGLLSSP-NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
KQLHA T P LFL IL + ++ + ++A ++FD I + S + LIR
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI--ENHSSFMWNTLIR 122
Query: 97 RCP-----PLESLQLFIEMRQLG-LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
C E+ L+ +M + G S D + + G QVH +VK GF
Sbjct: 123 ACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGF 182
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
G V N ++ LY G L ARKVF E+ S+VSW ++D +V++
Sbjct: 183 GGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF------------ 230
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
G A L +EM FE + T+ SVLSAC+ G + +
Sbjct: 231 -------------------GEYDSALQLFREMQR--SFEPDGYTMQSVLSACAGLGSLSL 269
Query: 271 GRWVHGFAVKAMGWD--LGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
G W H F ++ D + V+V SL++MY KCG + +A VF+ M +R++ +WNA++ G
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 329 LAMHGMGKAVVDMFPHMV---EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI 385
A HG + ++ F MV E V+P++VTF+ LL AC+H G V +GRQYF + Y I
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 389
Query: 386 RPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHG-KLQLAEKIV 444
P +EHY C+VDL+ RAG++ EA +V MP++P+ V+ SLL +C G ++L+E+I
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIA 449
Query: 445 RELVEMDPLN-------TEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV 497
R ++ N + ++LLS +YA + + R+++ + GIRK PG SSI +
Sbjct: 450 RNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEI 509
Query: 498 DGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEE 557
+G H+F AGD SHP+T +IY +L + RLR GY+P+ + L ++ G
Sbjct: 510 NGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDG-------S 562
Query: 558 VEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRY 617
E L HSE+LA+ FGLI+ +P+ IFKNLR+C DCH K+ S ++ EI+VRDR
Sbjct: 563 KEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRV 622
Query: 618 RFHSFKQGSCSCSDYW 633
RFH FK GSCSC DYW
Sbjct: 623 RFHHFKDGSCSCLDYW 638
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/504 (38%), Positives = 307/504 (60%), Gaps = 17/504 (3%)
Query: 137 VGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVV 196
+G + H+ ++ FG K V +++++Y G L A++VF + + +W V++
Sbjct: 80 LGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 197 KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFEL----NC 252
K ++ R +FD MPERN ++W+ +I GYV G KEA L +EM E N
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 253 VTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFK 312
T+ +VLSAC + G + G+WVH + + ++ +++GT+L+DMYAKCG + A VF
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAY-IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 313 NM-SRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV--EEVKPDAVTFMALLSACSHSGLV 369
+ S+++V A++A++ LAM+G+ +F M + + P++VTF+ +L AC H GL+
Sbjct: 259 ALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLI 318
Query: 370 EQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLG 429
+G+ YF+ + + I P I+HY CMVDL GR+G ++EAE + MP+ P+ ++ GSLL
Sbjct: 319 NEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 378
Query: 430 SCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKV 489
G ++ E ++ L+E+DP+N+ ++LLSN+YA +G+ + R ++ +GI KV
Sbjct: 379 GSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKV 438
Query: 490 PGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSG 549
PG S + V+G +H+F GD+S + IY LD+++ RLR AGYV +T +VL
Sbjct: 439 PGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTK-EVLL------ 491
Query: 550 DCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKR 609
D E +E+ L HSEKLA+ F L+ T G+P+ I KNLRIC DCH +K+ S ++ R
Sbjct: 492 DLNEKDKEI--ALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSR 549
Query: 610 EIVVRDRYRFHSFKQGSCSCSDYW 633
EIVVRD RFH F+ GSCSC D+W
Sbjct: 550 EIVVRDCNRFHHFRDGSCSCRDFW 573
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/606 (36%), Positives = 335/606 (55%), Gaps = 24/606 (3%)
Query: 37 GKQLHAVATVTGLLSS-PNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDY---- 91
K LHA G++ P L N +++VY C SHA ++FDE+P H+D + +
Sbjct: 22 AKALHAHIVKLGIVQCCP---LANTLVNVYGKCGAASHALQVFDEMP--HRDHIAWASVL 76
Query: 92 TALIRRCPPLESLQLFIEMRQLG-LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
TAL + ++L +F + L D LG + G QVH + +
Sbjct: 77 TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 136
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
V ++++D+Y K GLL A+ VF I V + +SWT ++ G K E +F
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
+P +N +WT +I G+V +G EAF + EM L+ + L S++ AC+
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIA 256
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
GR VHG + A+G+D V + +L+DMYAKC + A +F M R+VV+W +++ G+A
Sbjct: 257 GRQVHGLVI-ALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA 315
Query: 331 MHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI 389
HG + + ++ MV VKP+ VTF+ L+ ACSH G VE+GR+ F+ + Y IRP +
Sbjct: 316 QHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSL 375
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE 449
+HY C++DLLGR+G L+EAE L+ MP P+E +LL +C G+ Q+ +I LV
Sbjct: 376 QHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS 435
Query: 450 MDPL-NTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
L + +ILLSN+YA + K + RR L + +RK PG SS+ V + F AG+
Sbjct: 436 SFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGE 495
Query: 509 KSHPRTSEIYLKLDDMICRLRL-AGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSE 567
SHP +I+ L + +R+ GYVP+T+ + D E +E E++LF HSE
Sbjct: 496 TSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWIL-------HDMDE--QEKEKLLFWHSE 546
Query: 568 KLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSC 627
+ A+ +GL+ G+P+ I KNLR+C DCH +K S I +REI+VRD R+H FK G C
Sbjct: 547 RSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKC 606
Query: 628 SCSDYW 633
SC+D+W
Sbjct: 607 SCNDFW 612
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/504 (38%), Positives = 294/504 (58%), Gaps = 44/504 (8%)
Query: 132 LGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVV 191
+ D +G +HS V++ GFG V N+++ LY G + A KVF ++ +V+W V
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 192 LDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELN 251
++ G+ NG +EA L EM G + +
Sbjct: 61 IN-------------------------------GFAENGKPEEALALYTEM-NSKGIKPD 88
Query: 252 CVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVF 311
T+ S+LSAC++ G + +G+ VH + +K +G + L+D+YA+CGR+ A +F
Sbjct: 89 GFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDLYARCGRVEEAKTLF 147
Query: 312 KNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM--VEEVKPDAVTFMALLSACSHSGLV 369
M +N V+W +++ GLA++G GK +++F +M E + P +TF+ +L ACSH G+V
Sbjct: 148 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 207
Query: 370 EQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLG 429
++G +YFR + Y+I P IEH+ CMVDLL RAG +++A +K MP++PN V+ +LLG
Sbjct: 208 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 267
Query: 430 SCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKV 489
+C HG LAE ++++++P ++ ++LLSNMYA + R+ + + G++KV
Sbjct: 268 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 327
Query: 490 PGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSG 549
PG S + V ++H+F GDKSHP++ IY KL +M RLR GYVP + +
Sbjct: 328 PGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV------- 380
Query: 550 DCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKR 609
D E EE E + HSEK+A+ F LIST SP+ + KNLR+C DCH AIK+ S +Y R
Sbjct: 381 DVEE--EEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNR 438
Query: 610 EIVVRDRYRFHSFKQGSCSCSDYW 633
EIVVRDR RFH FK GSCSC DYW
Sbjct: 439 EIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 139/307 (45%), Gaps = 50/307 (16%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ +H+V +G S ++++N++LH+YA C + A K+FD++P+ KD V + ++I
Sbjct: 7 GETIHSVVIRSGFGSL--IYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNSVIN 62
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
P E+L L+ EM G+ D ++G +G +VH ++K G +
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
N ++DLY + G + EA+ +F E M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDE-------------------------------MV 151
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG- 271
++N V+WT +IVG NGF KEA L K M G +T +L ACS G V G
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 272 ----RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR-NVVAWNAVL 326
R + ++ G M VD+ A+ G++ A K+M + NVV W +L
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCM-----VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 327 GGLAMHG 333
G +HG
Sbjct: 267 GACTVHG 273
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/599 (35%), Positives = 323/599 (53%), Gaps = 63/599 (10%)
Query: 41 HAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPP 100
H VA +T LLS +Y+ + A KLFDEIP + V +TAL
Sbjct: 144 HDVAAMTSLLS------------IYSGSGRLNDAHKLFDEIPD--RSVVTWTALFSGYTT 189
Query: 101 ----LESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRV 156
E++ LF +M ++G+ D +GD + G + + + K + V
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 157 CNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNE 216
+++LY K G +E R VFD M E++
Sbjct: 250 RTTLVNLYAKCG-------------------------------KMEKARSVFDSMVEKDI 278
Query: 217 VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHG 276
V W+ MI GY N F KE L +M+ + + ++ LS+C+ G + +G W G
Sbjct: 279 VTWSTMIQGYASNSFPKEGIELFLQML-QENLKPDQFSIVGFLSSCASLGALDLGEW--G 335
Query: 277 FA-VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMG 335
+ + + + + +L+DMYAKCG ++ VFK M +++V NA + GLA +G
Sbjct: 336 ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
Query: 336 KAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYAC 394
K +F + + PD TF+ LL C H+GL++ G ++F + VY ++ +EHY C
Sbjct: 396 KLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGC 455
Query: 395 MVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLN 454
MVDL GRAG L++A L+ MP+RPN +V G+LL C QLAE +++EL+ ++P N
Sbjct: 456 MVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWN 515
Query: 455 TEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRT 514
++ LSN+Y++ G+ ++A R ++ K+G++K+PG S I ++G++H+F A DKSHP +
Sbjct: 516 AGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLS 575
Query: 515 SEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFG 574
+IY KL+D+ +RL G+VP TT V F D E EE E+VL HSEKLA+ G
Sbjct: 576 DKIYAKLEDLGNEMRLMGFVP-TTEFVFF------DVEE--EEKERVLGYHSEKLAVALG 626
Query: 575 LISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
LIST G + + KNLR+C DCH +K+ S I +REIVVRD RFH F GSCSC+DYW
Sbjct: 627 LISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 158/340 (46%), Gaps = 36/340 (10%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
E+L LF+ +R+ GL + R +G +HS VVK GF +++
Sbjct: 94 ETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLL 153
Query: 162 DLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTV 221
+Y G L +A K+F EI SVV+WT +
Sbjct: 154 SIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS---------------------------- 185
Query: 222 MIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKA 281
GY +G +EA L K+MV G + + + VLSAC GD+ G W+ + ++
Sbjct: 186 ---GYTTSGRHREAIDLFKKMV-EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKY-MEE 240
Query: 282 MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDM 341
M V T+LV++YAKCG++ A VF +M +++V W+ ++ G A + K +++
Sbjct: 241 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 300
Query: 342 FPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLG 400
F M++E +KPD + + LS+C+ G ++ G ++ L +E + ++D+
Sbjct: 301 FLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 401 RAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLA 440
+ G + + K+M + V++ + + +G ++L+
Sbjct: 360 KCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLS 398
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/602 (34%), Positives = 330/602 (54%), Gaps = 50/602 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ +HA G ++F++N ++ +YA C AR +F+ +P + V +TA++
Sbjct: 138 GRFVHAQVFRLGF--DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVS 195
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ P+E+L++F +MR++ + D L D G +H+ VVK G
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL-- 253
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
EIE ++S + K V + +++FD M
Sbjct: 254 --------------------------EIEPDLLISLNTMY---AKCGQVATAKILFDKMK 284
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
N + W MI GY NG+ +EA + EM+ + +++ S +SAC+Q G + R
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
++ + ++ D V + ++L+DM+AKCG + A +VF R+VV W+A++ G +H
Sbjct: 344 SMYEYVGRSDYRD-DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH 402
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G + + ++ M V P+ VTF+ LL AC+HSG+V +G +F + ++I P+ +H
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQH 461
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
YAC++DLLGRAGHL++A ++K MP++P V G+LL +C H ++L E ++L +D
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSID 521
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P NT +++ LSN+YA + ++ R +K++G+ K G S + V G+L F GDKSH
Sbjct: 522 PSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSH 581
Query: 512 PRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLAL 571
PR EI +++ + RL+ G+V N +S D + EE E+ L +HSE++A+
Sbjct: 582 PRYEEIERQVEWIESRLKEGGFVANKD-------ASLHDLND--EEAEETLCSHSERIAI 632
Query: 572 CFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSD 631
+GLIST G+PL I KNLR C +CH+A K+ S + REIVVRD RFH FK G CSC D
Sbjct: 633 AYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGD 692
Query: 632 YW 633
YW
Sbjct: 693 YW 694
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 197/415 (47%), Gaps = 42/415 (10%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRR 97
KQ+HA V GL S FL ++H ++ + AR++FD++P+ + A+IR
Sbjct: 38 KQIHARLLVLGLQFSG--FLITKLIHASSSFGDITFARQVFDDLPRPQ--IFPWNAIIRG 93
Query: 98 CPP----LESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
++L ++ M+ +S D L +G VH+ V + GF
Sbjct: 94 YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
V N ++ LY K LG AR VF EG+ +PE
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVF---------------------EGLP--------LPE 184
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
R V+WT ++ Y NG EA + +M + + V L SVL+A + D+ GR
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMR-KMDVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
+H VK MG ++ + SL MYAKCG+++ A ++F M N++ WNA++ G A +G
Sbjct: 244 IHASVVK-MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 334 MGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
+ +DMF M+ ++V+PD ++ + +SAC+ G +EQ R + + + R ++
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY-EYVGRSDYRDDVFIS 361
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+ ++D+ + G +E A L+ + R + VV +++ HG+ + A + R +
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDR-DVVVWSAMIVGYGLHGRAREAISLYRAM 415
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 337/643 (52%), Gaps = 70/643 (10%)
Query: 39 QLHAVA--TVTGLLSSPNLFLRNAILHVYAACA----LPSHARKLFDEIPQSHKDS---- 88
Q HA A + G ++S + NA++ VY+ CA L ARK+FDEI + + S
Sbjct: 170 QFHAAALKSGAGYITS----VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTM 225
Query: 89 --------------------------VDYTALI----RRCPPLESLQLFIEMRQLGLSID 118
V Y A+I R E+L++ M G+ +D
Sbjct: 226 MTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELD 285
Query: 119 XXXXXXXXXXXXRLGDPNVGPQVHSGVVK---FGFGKCTRVCNAVMDLYVKFGLLGEARK 175
G +G QVH+ V++ F F N+++ LY K G EAR
Sbjct: 286 EFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF----HFDNSLVSLYYKCGKFDEARA 341
Query: 176 VFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEA 235
+F ++ +VSW +L G V + +++F M E+N ++W +MI G NGF +E
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 236 FWLLKEMVFGC----GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVG 291
L F C GFE + +C+ G C G+ H +K +G+D + G
Sbjct: 402 LKL-----FSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAG 455
Query: 292 TSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VK 350
+L+ MYAKCG + A VF+ M + V+WNA++ L HG G VD++ M+++ ++
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 351 PDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAEL 410
PD +T + +L+ACSH+GLV+QGR+YF +E+VY I P +HYA ++DLL R+G +AE
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAES 575
Query: 411 LVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGK 470
+++ +P +P + +LL C HG ++L +L + P + ++LLSNM+A +G+
Sbjct: 576 VIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQ 635
Query: 471 VEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRL 530
E+ R++++ RG++K S I ++ Q+H F D SHP +Y+ L D+ +R
Sbjct: 636 WEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRR 695
Query: 531 AGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNL 590
GYVP+T+ VL S G E +L HSEK+A+ FGL+ G+ + IFKNL
Sbjct: 696 LGYVPDTSF-VLHDVESDG-------HKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNL 747
Query: 591 RICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
R C DCH+ + S + +R+I++RDR RFH F+ G CSC ++W
Sbjct: 748 RTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 218/510 (42%), Gaps = 92/510 (18%)
Query: 50 LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQ 105
+S P+ R ++ Y A + AR +F++ P +D+V Y A+I ++
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 106 LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVG-PQVHSGVVKFGFGKCTRVCNAVMDLY 164
LF +M+ G D + D Q H+ +K G G T V NA++ +Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 165 VKFG----LLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNE-VAW 219
K LL ARKVF EI SWT ++ G VK + G + +GM + + VA+
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 220 TVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAV 279
MI GYV GF +EA +++ MV G EL+ T SV+ AC+ +G + +G+ VH + +
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMV-SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 280 KAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVL------------- 326
+ D SLV +Y KCG+ A +F+ M +++V+WNA+L
Sbjct: 314 RRE--DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 327 ------------------GGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACS--- 364
GLA +G G+ + +F M E +P F + +C+
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 365 --------HS------------------------GLVEQGRQYFRDLESVYEIRPEIEHY 392
H+ G+VE+ RQ FR + + + +
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-----W 486
Query: 393 ACMVDLLGRAGHLEEA----ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVR--E 446
++ LG+ GH EA E ++KK IRP+ + L ++L +C G + K E
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKK-GIRPDRITLLTVLTACSHAGLVDQGRKYFDSME 545
Query: 447 LVEMDPLNTEYHILLSNMYALSGKVEKANS 476
V P +++ L ++ SGK A S
Sbjct: 546 TVYRIPPGADHYARLIDLLCRSGKFSDAES 575
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 171/391 (43%), Gaps = 58/391 (14%)
Query: 141 VHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEG 200
VH ++ FGF + N ++D+Y K L AR++F EI P ++ T ++ G
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 201 VESGRVVFDGMP--ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSV 258
+ R VF+ P R+ V + MI G+ N A L +M GF+ + T SV
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE-GFKPDNFTFASV 154
Query: 259 LSACSQSGD---VCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGR----ISIALVVF 311
L+ + D CV H A+K+ G V +LV +Y+KC + A VF
Sbjct: 155 LAGLALVADDEKQCV--QFHAAALKS-GAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 312 KNMSRRN--------------------------------VVAWNAVLGGLAMHGMGKAVV 339
+ ++ +VA+NA++ G G + +
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 340 DMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY---ACM 395
+M MV ++ D T+ +++ AC+ +GL++ G+Q Y +R E + +
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV-----HAYVLRREDFSFHFDNSL 326
Query: 396 VDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNT 455
V L + G +EA + +KMP + + V +LL + G + A+ I +E+ E + L+
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS- 384
Query: 456 EYHILLSNMYALSGKVEKANSFRRVLKKRGI 486
+ I++S + A +G E+ +K+ G
Sbjct: 385 -WMIMISGL-AENGFGEEGLKLFSCMKREGF 413
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 358 bits (918), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 210/603 (34%), Positives = 323/603 (53%), Gaps = 57/603 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+QLH T G + P F+ A++ +Y C L + ARK+F+E PQS + SV Y ALI
Sbjct: 72 GQQLHCHVTKGGCETEP--FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALIS 129
Query: 97 ----RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
++ +F M++ G+S+D +G +H VK G
Sbjct: 130 GYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS 189
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N+ + +Y+K G VE+GR +FD MP
Sbjct: 190 EVAVLNSFITMYMKCG-------------------------------SVEAGRRLFDEMP 218
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+ + W +I GY NG + L ++M G + TL SVLS+C+ G +G
Sbjct: 219 VKGLITWNAVISGYSQNGLAYDVLELYEQMK-SSGVCPDPFTLVSVLSSCAHLGAKKIGH 277
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
V G V++ G+ V V + + MYA+CG ++ A VF M +++V+W A++G MH
Sbjct: 278 EV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
GMG+ + +F M++ ++PD F+ +LSACSHSGL ++G + FR ++ Y++ P EH
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
Y+C+VDLLGRAG L+EA ++ MP+ P+ V G+LLG+C H + +AE +++E +
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFE 456
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P N Y++L+SN+Y+ S E R ++++R RK PG S + G++H F AGD+SH
Sbjct: 457 PNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSH 516
Query: 512 PRTSEIYLKLDDM-ICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLA 570
+T E++ LD++ + LAG + DC EEV HSE+LA
Sbjct: 517 EQTEEVHRMLDELETSVMELAGNM---------------DCDRG-EEVSSTTREHSERLA 560
Query: 571 LCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCS 630
+ FG++++ G+ + + KNLR+C+DCH +K S I R+ VVRD RFH FK G CSC
Sbjct: 561 IAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCK 620
Query: 631 DYW 633
DYW
Sbjct: 621 DYW 623
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 173/386 (44%), Gaps = 39/386 (10%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
ES+ L+ M + G S D L P G Q+H V K G V A++
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 162 DLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTV 221
+Y K GL+ +ARKVF E S +S V +
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLS-----------------------------VCYNA 126
Query: 222 MIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKA 281
+I GY N +A ++ + M G ++ VT+ ++ C+ + +GR +HG VK
Sbjct: 127 LISGYTANSKVTDAAYMFRRMK-ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG 185
Query: 282 MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDM 341
G D V V S + MY KCG + +F M + ++ WNAV+ G + +G+ V+++
Sbjct: 186 -GLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLEL 244
Query: 342 FPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLG 400
+ M V PD T +++LS+C+H G + G + + +ES + P + + +
Sbjct: 245 YEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFVSNASISMYA 303
Query: 401 RAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYA-HGKLQLAEKIVRELVE--MDPLNTEY 457
R G+L +A + MP++ +V + + CY HG ++ + ++++ + P +
Sbjct: 304 RCGNLAKARAVFDIMPVK--SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361
Query: 458 HILLSNMYALSGKVEKANSFRRVLKK 483
++LS + SG +K R +K+
Sbjct: 362 VMVLSAC-SHSGLTDKGLELFRAMKR 386
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 358 bits (918), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 207/567 (36%), Positives = 314/567 (55%), Gaps = 48/567 (8%)
Query: 72 SHARKLFDEIPQSHKDSVDYTALIR----RCPPLESLQLFIEMRQLGLSIDXXXXXXXXX 127
S+AR LF+ + S D V + ++ R PLE LF+E+ + G+ D
Sbjct: 80 SYARHLFEAM--SEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 128 XXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVS 187
G Q+H +K G VC ++++Y +
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTE--------------------- 176
Query: 188 WTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCG 247
E V+S R VFD + E V + MI GY EA L +EM G
Sbjct: 177 ----------CEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ-GKY 225
Query: 248 FELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
+ N +TL SVLS+C+ G + +G+W+H +A K + V V T+L+DM+AKCG + A
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYA-KKHSFCKYVKVNTALIDMFAKCGSLDDA 284
Query: 308 LVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHS 366
+ +F+ M ++ AW+A++ A HG + + MF M E V+PD +TF+ LL+ACSH+
Sbjct: 285 VSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
Query: 367 GLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGS 426
G VE+GR+YF + S + I P I+HY MVDLL RAG+LE+A + K+PI P ++
Sbjct: 345 GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRI 404
Query: 427 LLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGI 486
LL +C +H L LAEK+ + E+D + +++LSN+YA + K E +S R+V+K R
Sbjct: 405 LLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKA 464
Query: 487 RKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCS 546
KVPG SSI V+ +H+F +GD T++++ LD+M+ L+L+GYVP+T+ V +
Sbjct: 465 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMN 524
Query: 547 SSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNI 606
+E E L HSEKLA+ FGL++T G+ + + KNLR+C+DCH+A K+ S I
Sbjct: 525 D--------QEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLI 576
Query: 607 YKREIVVRDRYRFHSFKQGSCSCSDYW 633
+ R++V+RD RFH F+ G CSC D+W
Sbjct: 577 FGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 40/275 (14%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+QLH ++ GL N+++ ++++Y C AR +FD I + V Y A+I
Sbjct: 148 GRQLHCLSMKLGL--DDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC--VVCYNAMIT 203
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
RR P E+L LF EM+ L + LG ++G +H K F K
Sbjct: 204 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 263
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+V A++D++ K G L +A VS +F+ M
Sbjct: 264 YVKVNTALIDMFAKCGSLDDA------------VS-------------------IFEKMR 292
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
++ AW+ MIV Y +G +++ + + M + + +T +L+ACS +G V GR
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMR-SENVQPDEITFLGLLNACSHTGRVEEGR 351
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
V G + S+VD+ ++ G + A
Sbjct: 352 KYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 357 bits (916), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 214/602 (35%), Positives = 323/602 (53%), Gaps = 52/602 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
KQ+H A +S F+ A++ Y+ A LF+ + + D V + A++
Sbjct: 436 SKQVHVHAIKINNVSDS--FVSTALIDAYSRNRCMKEAEILFE---RHNFDLVAWNAMMA 490
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ ++L+LF M + G D L N G QVH+ +K G+
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V + ++D+YVK G + A+ FD +P
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQ-------------------------------FAFDSIP 579
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
++VAWT MI G + NG + AF + +M G + T+ ++ A S + GR
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRL-MGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H A+K + VGTSLVDMYAKCG I A +FK + N+ AWNA+L GLA H
Sbjct: 639 QIHANALK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQH 697
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G GK + +F M +KPD VTF+ +LSACSHSGLV + ++ R + Y I+PEIEH
Sbjct: 698 GEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEH 757
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
Y+C+ D LGRAG +++AE L++ M + + + +LL +C G + +++ +L+E++
Sbjct: 758 YSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELE 817
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
PL++ ++LLSNMYA + K ++ R ++K ++K PG S I V ++H F D+S+
Sbjct: 818 PLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSN 877
Query: 512 PRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLAL 571
+T IY K+ DMI ++ GYVP T ++ D E EE E+ L+ HSEKLA+
Sbjct: 878 RQTELIYRKVKDMIRDIKQEGYVPETDFTLV-------DVEE--EEKERALYYHSEKLAV 928
Query: 572 CFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSD 631
FGL+ST +P+ + KNLR+C DCH+A+K + +Y REIV+RD RFH FK G CSC D
Sbjct: 929 AFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGD 988
Query: 632 YW 633
YW
Sbjct: 989 YW 990
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 40/359 (11%)
Query: 104 LQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDL 163
L+ F +M + + D ++ +G QVH +K G V N+++++
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 164 YVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMI 223
Y K G AR VFD M ER+ ++W +I
Sbjct: 360 YCKLRKFGFAR-------------------------------TVFDNMSERDLISWNSVI 388
Query: 224 VGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGD-VCVGRWVHGFAVKAM 282
G NG EA L +++ CG + + T+ SVL A S + + + + VH A+K
Sbjct: 389 AGIAQNGLEVEAVCLFMQLL-RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN 447
Query: 283 GWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMF 342
V T+L+D Y++ + A ++F+ + ++VAWNA++ G G + +F
Sbjct: 448 NVS-DSFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 343 PHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQ-YFRDLESVYEIRPEIEHYACMVDLLG 400
M ++ + D T + C + QG+Q + ++S Y++ + + ++D+
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYV 563
Query: 401 RAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHI 459
+ G + A+ +P+ P++V +++ C +G+ + A + ++ M L E+ I
Sbjct: 564 KCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 204 GRVVFDGMPERNEVAWTVMIVGYVGNG-----FTKEAFWLLKEMVFGCGFELNCVTLCSV 258
R VFD MP+R+ V+W ++ Y + ++AF L + + + + +TL +
Sbjct: 93 ARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYT-SRMTLSPM 151
Query: 259 LSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRN 318
L C SG V HG+A K +G D V +LV++Y K G++ V+F+ M R+
Sbjct: 152 LKLCLHSGYVWASESFHGYACK-IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 319 VVAWNAVLGGLAMHGMGKAVVDM 341
VV WN +L G + +D+
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDL 233
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 35/160 (21%)
Query: 292 TSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA------MHGMGKAVVDMFPHM 345
+L+ MY+KCG ++ A VF M R++V+WN++L A + + +A +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 346 VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLG----- 400
+ V +T +L C HSG V + YAC + L G
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESF--------------HGYACKIGLDGDEFVA 183
Query: 401 --------RAGHLEEAELLVKKMPIRPNEVVLGSLLGSCY 432
+ G ++E ++L ++MP R +VVL +L+ Y
Sbjct: 184 GALVNIYLKFGKVKEGKVLFEEMPYR--DVVLWNLMLKAY 221
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 211/606 (34%), Positives = 335/606 (55%), Gaps = 45/606 (7%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK+LHA A G L N F+ +A++ +Y C R++FD + + + A+I
Sbjct: 321 GKELHAYALKNGSLDE-NSFVGSALVDMYCNCKQVLSGRRVFDGMFD--RKIGLWNAMIA 377
Query: 96 ---RRCPPLESLQLFIEMRQ-LGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
+ E+L LFI M + GL + R G + +H VVK G
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ V N +MD+Y + G + A ++FG++E +V+W ++ G V E E ++ M
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 212 P--ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC 269
ER V G ++ + N +TL ++L +C+ +
Sbjct: 498 QNLERK-----------VSKGASR------------VSLKPNSITLMTILPSCAALSALA 534
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
G+ +H +A+K V VG++LVDMYAKCG + ++ VF + ++NV+ WN ++
Sbjct: 535 KGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 330 AMHGMGKAVVDMFP-HMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
MHG G+ +D+ MV+ VKP+ VTF+++ +ACSHSG+V++G + F ++ Y + P
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 653
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEV-VLGSLLGSCYAHGKLQLAEKIVREL 447
+HYAC+VDLLGRAG ++EA L+ MP N+ SLLG+ H L++ E + L
Sbjct: 654 SDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNL 713
Query: 448 VEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAG 507
++++P +++LL+N+Y+ +G +KA RR +K++G+RK PG S I ++H+F AG
Sbjct: 714 IQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAG 773
Query: 508 DKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSE 567
D SHP++ ++ L+ + R+R GYVP+T+C VL +E E +L HSE
Sbjct: 774 DSSHPQSEKLSGYLETLWERMRKEGYVPDTSC-VLHNVEE--------DEKEILLCGHSE 824
Query: 568 KLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSC 627
KLA+ FG+++TS G+ + + KNLR+C DCH A K S I REI++RD RFH FK G+C
Sbjct: 825 KLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTC 884
Query: 628 SCSDYW 633
SC DYW
Sbjct: 885 SCGDYW 890
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 39/278 (14%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG-KCTRVCNAV 160
E++ +++M LG+ D L D +G Q+H+ V KFG+G V N +
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 161 MDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWT 220
++LY K G G KVF I + VSW ++ + +E E F M + N
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN----- 194
Query: 221 VMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQ---SGDVCVGRWVHGF 277
E + TL SV++ACS + +G+ VH +
Sbjct: 195 ---------------------------VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 227
Query: 278 AVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKA 337
++ +L + +LV MY K G+++ + V+ + R++V WN VL L +
Sbjct: 228 GLRK--GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLE 285
Query: 338 VVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQ 374
++ MV E V+PD T ++L ACSH ++ G++
Sbjct: 286 ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 137/573 (23%), Positives = 235/573 (41%), Gaps = 104/573 (18%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQ+HA G ++ + N ++++Y C K+FD I S ++ V + +LI
Sbjct: 116 GKQIHAHVYKFGY-GVDSVTVANTLVNLYRKCGDFGAVYKVFDRI--SERNQVSWNSLIS 172
Query: 97 RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRV 156
E ++ +E + L D NV P + V V
Sbjct: 173 SLCSFEKWEMALEAFRCML------------------DENVEPSSFTLV---------SV 205
Query: 157 CNAVMDLYVKFGLL-GEARKVFG--EIEVPS-VVSWTVVLDGVVKWEGVESGRVVFDGMP 212
A +L + GL+ G+ +G + E+ S +++ V + G K + S +V+
Sbjct: 206 VTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYG--KLGKLASSKVLLGSFG 263
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
R+ V W ++ N EA L+EMV G E + T+ SVL ACS + G+
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H +A+K D VG++LVDMY C ++ VF M R + WNA++ G + +
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 333 GMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSG-----------LVEQG--RQYF- 376
K + +F M E + ++ T ++ AC SG +V++G R F
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV 442
Query: 377 -RDLESVYEIRPEIE---------------HYACMVDLLGRAGHLEEAELLVKKM----- 415
L +Y +I+ + M+ + H E+A LL+ KM
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 416 ---------PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHI--LLSNM 464
++PN + L ++L SC A L ++I ++ + L T+ + L +M
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-NNLATDVAVGSALVDM 561
Query: 465 YALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDM 524
YA G ++ + R+V + + V + I + +H G ++ D+
Sbjct: 562 YAKCGCLQMS---RKVFDQIPQKNVITWNVIIMAYGMH--GNGQEA-----------IDL 605
Query: 525 ICRLRLAGYVPN--TTCQVLFGCSSSGDCTEAL 555
+ + + G PN T V CS SG E L
Sbjct: 606 LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 116/238 (48%), Gaps = 16/238 (6%)
Query: 219 WTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFA 278
W ++ V + +EA +M+ G + + ++L A + D+ +G+ +H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIV-LGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 279 VK-AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKA 337
K G D V V +LV++Y KCG VF +S RN V+WN+++ L +
Sbjct: 124 YKFGYGVD-SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 338 VVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVE---QGRQYFRDLESVYEIRP-EIEHY 392
++ F M++E V+P + T +++++ACS+ + E G+Q Y +R E+ +
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH-----AYGLRKGELNSF 237
Query: 393 --ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
+V + G+ G L +++L+ R + V ++L S + +L A + +RE+V
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMV 294
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 216/607 (35%), Positives = 328/607 (54%), Gaps = 54/607 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALP---SHARKLFDEIPQSHKDSVDYTA 93
GKQLH+ A +GL+ + +++ +YA C+ RK+FD + + H + +TA
Sbjct: 288 GKQLHSWAIRSGLVDD----VECSLVDMYAKCSADGSVDDCRKVFDRM-EDHS-VMSWTA 341
Query: 94 LI----RRCP-PLESLQLFIEMRQLG-LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVK 147
LI + C E++ LF EM G + + L DP VG QV K
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 148 FGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVV 207
G + V N+V+ ++VK + +A++ F
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAF------------------------------ 431
Query: 208 FDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGD 267
+ + E+N V++ + G N ++AF LL E+ ++ T S+LS + G
Sbjct: 432 -ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT-ERELGVSAFTFASLLSGVANVGS 489
Query: 268 VCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLG 327
+ G +H VK +G V +L+ MY+KCG I A VF M RNV++W +++
Sbjct: 490 IRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
Query: 328 GLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIR 386
G A HG V++ F M+EE VKP+ VT++A+LSACSH GLV +G ++F + ++I+
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
Query: 387 PEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRE 446
P++EHYACMVDLL RAG L +A + MP + + +V + LG+C H +L + R+
Sbjct: 609 PKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARK 668
Query: 447 LVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSA 506
++E+DP +I LSN+YA +GK E++ RR +K+R + K G S I V ++H+F
Sbjct: 669 ILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYV 728
Query: 507 GDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHS 566
GD +HP +IY +LD +I ++ GYVP+T VL E E++L+ HS
Sbjct: 729 GDTAHPNAHQIYDELDRLITEIKRCGYVPDTDL-VLHKLEE----ENDEAEKERLLYQHS 783
Query: 567 EKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGS 626
EK+A+ FGLISTS P+ +FKNLR+C DCH+A+K S + REIV+RD RFH FK G
Sbjct: 784 EKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGK 843
Query: 627 CSCSDYW 633
CSC+DYW
Sbjct: 844 CSCNDYW 850
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 204/480 (42%), Gaps = 80/480 (16%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDEIPQ-SHKDSVDYTALI----RRCPPLESLQLF 107
P+ L N+++ +Y+ + A +F+ + + +D V ++A++ L+++++F
Sbjct: 95 PDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVF 154
Query: 108 IEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKF 167
+E +LGL PN + + R C+ + V
Sbjct: 155 VEFLELGLV------------------PN----------DYCYTAVIRACSNSDFVGVGR 186
Query: 168 GLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEG-VESGRVVFDGMPERNEVAWTVMIVGY 226
LG K G E V +++ D VK E E+ VFD M E N V WT+MI
Sbjct: 187 VTLGFLMKT-GHFESDVCVGCSLI-DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 227 VGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDL 286
+ GF +EA +MV GFE + TL SV SAC++ ++ +G+ +H +A+++ D
Sbjct: 245 MQMGFPREAIRFFLDMVLS-GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD- 302
Query: 287 GVMVGTSLVDMYAKC---GRISIALVVFKNMSRRNVVAWNAVLGGLAMH-GMGKAVVDMF 342
V SLVDMYAKC G + VF M +V++W A++ G + + +++F
Sbjct: 303 --DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLF 360
Query: 343 PHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYF------------------------ 376
M+ + V+P+ TF + AC + G+Q
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420
Query: 377 ----RDLESVYEIRPE--IEHYACMVDLLGRAGHLEEAELLVKKMPIRP---NEVVLGSL 427
D + +E E + Y +D R + E+A L+ ++ R + SL
Sbjct: 421 SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASL 480
Query: 428 LGSCYAHGKLQLAEKIVRELVEMD-PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGI 486
L G ++ E+I ++V++ N L +MY+ G ++ A+ ++ R +
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 33/247 (13%)
Query: 131 RLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTV 190
R D +G VH+ +++F + + N+++ LY K G +A VF
Sbjct: 74 RARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF------------- 120
Query: 191 VLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFEL 250
E+ R +R+ V+W+ M+ Y NG +A + E + G
Sbjct: 121 -----------ETMR----RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVP 164
Query: 251 NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI--AL 308
N +V+ ACS S V VGR GF +K ++ V VG SL+DM+ K G S A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAY 223
Query: 309 VVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSG 367
VF MS NVV W ++ G + + F MV + D T ++ SAC+
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELE 283
Query: 368 LVEQGRQ 374
+ G+Q
Sbjct: 284 NLSLGKQ 290
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 214/604 (35%), Positives = 323/604 (53%), Gaps = 58/604 (9%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI-- 95
+QLH G L N+ R A++ Y+ C A +LF EI + V +TA+I
Sbjct: 315 EQLHCSVVKYGFLFDQNI--RTALMVAYSKCTAMLDALRLFKEIG-CVGNVVSWTAMISG 371
Query: 96 --RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGP-QVHSGVVKFGFGK 152
+ E++ LF EM++ G+ + P + P +VH+ VVK + +
Sbjct: 372 FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL-----PVISPSEVHAQVVKTNYER 426
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ V A++D YVK G + EA KVF I+ +V+W
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAW------------------------ 462
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQS-GDVCVG 271
+ M+ GY G T+ A + E+ G G + N T S+L+ C+ + + G
Sbjct: 463 -------SAMLAGYAQTGETEAAIKMFGELTKG-GIKPNEFTFSSILNVCAATNASMGQG 514
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+ HGFA+K+ D + V ++L+ MYAK G I A VFK +++V+WN+++ G A
Sbjct: 515 KQFHGFAIKSR-LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 332 HGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
HG +D+F M + +VK D VTF+ + +AC+H+GLVE+G +YF + +I P E
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 633
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
H +CMVDL RAG LE+A +++ MP + ++L +C H K +L +++ M
Sbjct: 634 HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM 693
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
P ++ ++LLSNMYA SG ++ R+++ +R ++K PG S I V + + F AGD+S
Sbjct: 694 KPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRS 753
Query: 511 HPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLA 570
HP +IY+KL+D+ RL+ GY P+T+ VL E E VL HSE+LA
Sbjct: 754 HPLKDQIYMKLEDLSTRLKDLGYEPDTS-YVLQDIDD--------EHKEAVLAQHSERLA 804
Query: 571 LCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSF-KQGSCSC 629
+ FGLI+T GSPL I KNLR+C DCH IK+ + I +REIVVRD RFH F G CSC
Sbjct: 805 IAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 864
Query: 630 SDYW 633
D+W
Sbjct: 865 GDFW 868
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 40/298 (13%)
Query: 73 HARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXX 128
+A LFD+ P ++S Y +L+ R E+ +LF+ + +LG+ +D
Sbjct: 45 NAHNLFDKSPGRDRES--YISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 129 XXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSW 188
L D G Q+H +KFGF V +++D Y+K + RKVF E++ +VV+W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 189 TVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGF 248
T +I GY N E L M G
Sbjct: 163 -------------------------------TTLISGYARNSMNDEVLTLFMRMQ-NEGT 190
Query: 249 ELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIAL 308
+ N T + L ++ G G VH VK G D + V SL+++Y KCG + A
Sbjct: 191 QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKAR 249
Query: 309 VVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSH 365
++F ++VV WN+++ G A +G+ + MF M + V+ +F +++ C++
Sbjct: 250 ILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 194 GVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCV 253
G V + + +FD P R+ ++ ++ G+ +G T+EA L + G E++C
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN-IHRLGMEMDCS 94
Query: 254 TLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKN 313
SVL + D GR +H +K G+ V VGTSLVD Y K VF
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIK-FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 314 MSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQG 372
M RNVV W ++ G A + M V+ +F M E +P++ TF A L + G+ +G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 373 RQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCY 432
Q + + I +++L + G++ +A +L K ++ VV + + S Y
Sbjct: 214 LQ-VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS--VVTWNSMISGY 270
Query: 433 AHGKLQL 439
A L L
Sbjct: 271 AANGLDL 277
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 210/620 (33%), Positives = 330/620 (53%), Gaps = 60/620 (9%)
Query: 61 ILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQLFIEMRQLGLS 116
++ YA+ + ARK+FDEIP+ ++ + +IR E +++F M +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPE--RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR 137
Query: 117 IDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKV 176
D G +G ++H K G V N ++ +Y K G L EAR V
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 177 FGEIEVPSVVSWTVVLDGVVKWE----------GVESGRVVFDG---------------- 210
E+ VVSW ++ G + + +ES ++ D
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTE 257
Query: 211 -----------MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVL 259
M +++ V+W VMI Y+ N EA L M GFE + V++ SVL
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME-ADGFEPDAVSITSVL 316
Query: 260 SACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV 319
AC + + +G+ +HG+ ++ +++ +L+DMYAKCG + A VF+NM R+V
Sbjct: 317 PACGDTSALSLGKKIHGY-IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
V+W A++ G G V +F + + + PD++ F+ L+ACSH+GL+E+GR F+
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435
Query: 379 LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ 438
+ Y+I P +EH ACMVDLLGRAG ++EA ++ M + PNE V G+LLG+C H
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495
Query: 439 LAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVD 498
+ +L ++ P + Y++LLSN+YA +G+ E+ + R ++K +G++K PG S++ V+
Sbjct: 496 IGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
Query: 499 GQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEV 558
+H F GD+SHP++ EIY +LD ++ +++ GYVP++ S+ D E E+
Sbjct: 556 RIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSE-------SALHDVEE--EDK 606
Query: 559 EQVLFAHSEKLALCFGLIST-----SSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVV 613
E L HSEKLA+ F L++T S + + I KNLRIC DCH A K+ S I REI++
Sbjct: 607 ETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIII 666
Query: 614 RDRYRFHSFKQGSCSCSDYW 633
RD RFH F+ G CSC DYW
Sbjct: 667 RDTNRFHVFRFGVCSCGDYW 686
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/588 (34%), Positives = 307/588 (52%), Gaps = 81/588 (13%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYT--ALIRRCPPLESLQLFIEM 110
P+ FL N+++ + LP H + + S+ +YT ++I+ C L +L+
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALR----- 124
Query: 111 RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLL 170
+G VH V GFG T V A++ Y K G
Sbjct: 125 --------------------------IGKGVHCHAVVSGFGLDTYVQAALVTFYSKCG-- 156
Query: 171 GEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNG 230
+E R VFD MPE++ VAW ++ G+ NG
Sbjct: 157 -----------------------------DMEGARQVFDRMPEKSIVAWNSLVSGFEQNG 187
Query: 231 FTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMV 290
EA + +M GFE + T S+LSAC+Q+G V +G WVH + + + G DL V +
Sbjct: 188 LADEAIQVFYQMR-ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII-SEGLDLNVKL 245
Query: 291 GTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVK 350
GT+L+++Y++CG + A VF M NV AW A++ HG G+ V++F M ++
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG 305
Query: 351 P--DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
P + VTF+A+LSAC+H+GLVE+GR ++ + Y + P +EH+ CMVD+LGRAG L+EA
Sbjct: 306 PIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
Query: 409 ELLVKKMPIRPNEVVLG---SLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMY 465
+ ++ ++LG+C H L +I + L+ ++P N +H++LSN+Y
Sbjct: 366 YKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIY 425
Query: 466 ALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMI 525
ALSGK ++ + R + + +RK G S I V+ + + FS GD+SH T EIY L+ +I
Sbjct: 426 ALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLI 485
Query: 526 CRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLY 585
R + GY P + +V+ EE E L HSEKLA+ FGL+ T + +
Sbjct: 486 SRCKEIGYAP-VSEEVMHQVEE--------EEKEFALRYHSEKLAVAFGLLKTVDVA-IT 535
Query: 586 IFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
I KNLRIC+DCHSA K S + R+I VRD+ RFH F+ GSCSC DYW
Sbjct: 536 IVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 44/333 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK +H A V+G + +++ A++ Y+ C AR++FD +P+ K V + +L+
Sbjct: 126 GKGVHCHAVVSGF--GLDTYVQAALVTFYSKCGDMEGARQVFDRMPE--KSIVAWNSLVS 181
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ E++Q+F +MR+ G D + G ++G VH ++ G
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
++ A+++LY + G +G+AR+VF +++
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMK------------------------------- 270
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
E N AWT MI Y +G+ ++A L +M CG N VT +VLSAC+ +G V GR
Sbjct: 271 ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGR 330
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA----WNAVLGG 328
V+ K+ GV +VDM + G + A + W A+LG
Sbjct: 331 SVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
Query: 329 LAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLS 361
MH V++ ++ ++PD +LS
Sbjct: 391 CKMHRNYDLGVEIAKRLI-ALEPDNPGHHVMLS 422
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 221/695 (31%), Positives = 349/695 (50%), Gaps = 121/695 (17%)
Query: 39 QLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI--- 95
++H + S ++ N+++ Y A +P ARKLFDE+P ++ + + L+
Sbjct: 32 KIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD--RNIISWNGLVSGY 89
Query: 96 -RRCPPLESLQLFIEMRQLGL---------SIDXXXXXXXXXXXXRLGDPNVGPQVHSGV 145
+ E+ ++F M + + + ++ + N +V V
Sbjct: 90 MKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN---KVSWTV 146
Query: 146 VKFGFGKCTRVCNAVMDLY------------------VKFGLLGEARKVFGEIEVPSVVS 187
+ GF + R+ +A LY K G + EAR++F E+ SV++
Sbjct: 147 MLIGFLQDGRIDDAC-KLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVIT 205
Query: 188 WTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEM----V 243
WT ++ G + V+ R +FD MPE+ EV+WT M++GYV NG ++A L + M V
Sbjct: 206 WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV 265
Query: 244 FGC-----------------------------------------GFELNCV--------- 253
C GFEL +
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 254 -------TLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
TL S+LS C+ + G+ VH V+ +D+ V V + L+ MY KCG +
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ-FDVDVYVASVLMTMYIKCGELVK 384
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM--VEEVKPDAVTFMALLSACS 364
+ ++F ++++ WN+++ G A HG+G+ + +F M KP+ VTF+A LSACS
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 365 HSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVL 424
++G+VE+G + + +ESV+ ++P HYACMVD+LGRAG EA ++ M + P+ V
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 425 GSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKR 484
GSLLG+C H +L +AE ++L+E++P N+ +ILLSNMYA G+ R+++K R
Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Query: 485 GIRKVPGMSSIYVDGQLHQFSAGD-KSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLF 543
+RK PG S V+ ++H F+ G SHP I LD++ LR AGY P
Sbjct: 565 LVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNP-------- 616
Query: 544 GCSSSGDCTEALEEVEQ-----VLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHS 598
DC+ AL +V++ L HSE+LA+ + L+ S G P+ + KNLR+C DCH+
Sbjct: 617 ------DCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHT 670
Query: 599 AIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
AIKI S + +REI++RD RFH F+ G CSC DYW
Sbjct: 671 AIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 207/565 (36%), Positives = 310/565 (54%), Gaps = 25/565 (4%)
Query: 74 ARKLFDEIPQSHKDSVDYTALIR---RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXX 130
A +LFDEIP+ D+ Y ++ R E Q F + D
Sbjct: 112 AHQLFDEIPEP--DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK---DAASWNTMITGYA 166
Query: 131 RLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTV 190
R G+ ++ +++ K NA++ Y++ G L +A F V VV+WT
Sbjct: 167 RRGEMEKARELFYSMME----KNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTA 222
Query: 191 VLDGVVKWEGVESGRVVFDGMP-ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFE 249
++ G +K + VE +F M +N V W MI GYV N ++ L + M+ G
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE-GIR 281
Query: 250 LNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALV 309
N L S L CS+ + +GR +H K+ + V TSL+ MY KCG + A
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN-DVTALTSLISMYCKCGELGDAWK 340
Query: 310 VFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGL 368
+F+ M +++VVAWNA++ G A HG + +F M++ +++PD +TF+A+L AC+H+GL
Sbjct: 341 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Query: 369 VEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLL 428
V G YF + Y++ P+ +HY CMVDLLGRAG LEEA L++ MP RP+ V G+LL
Sbjct: 401 VNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLL 460
Query: 429 GSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRK 488
G+C H ++LAE +L++++ N ++ L+N+YA + E R+ +K+ + K
Sbjct: 461 GACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVK 520
Query: 489 VPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSS 548
VPG S I + ++H F + D+ HP I+ KL ++ +++LAGY P ++ F +
Sbjct: 521 VPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKP----ELEFALHNV 576
Query: 549 GDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYK 608
+ E+ E++L HSEKLA+ FG I GS + +FKNLRIC DCH AIK S I K
Sbjct: 577 EE-----EQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEK 631
Query: 609 REIVVRDRYRFHSFKQGSCSCSDYW 633
REI+VRD RFH FK GSCSC DYW
Sbjct: 632 REIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 16/281 (5%)
Query: 172 EARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGF 231
EA ++F EI P S+ ++L V+ E + FD MP ++ +W MI GY G
Sbjct: 111 EAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGE 170
Query: 232 TKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVG 291
++A L M+ E N V+ +++S + GD + + H F V + GV+
Sbjct: 171 MEKARELFYSMM-----EKNEVSWNAMISGYIECGD--LEKASHFFKVAPVR---GVVAW 220
Query: 292 TSLVDMYAKCGRISIALVVFKNMS-RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-V 349
T+++ Y K ++ +A +FK+M+ +N+V WNA++ G + + + +F M+EE +
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 350 KPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAE 409
+P++ + L CS ++ GRQ + S + ++ ++ + + G L +A
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQ-IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 410 LLVKKMPIRPNEVVLGSLLGSCYA-HGKLQLAEKIVRELVE 449
L + M + +VV + + S YA HG A + RE+++
Sbjct: 340 KLFEVM--KKKDVVAWNAMISGYAQHGNADKALCLFREMID 378
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 117/298 (39%), Gaps = 28/298 (9%)
Query: 207 VFDGMPERNEVAWTVMIVGYVGN-GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQS 265
VF GM +N + W +++G + EA L E+ F N + C V + +
Sbjct: 83 VFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEK 142
Query: 266 GDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAV 325
R A W+ +++ YA+ G + A +F +M +N V+WNA+
Sbjct: 143 AQSFFDRMPFK---DAASWN-------TMITGYARRGEMEKARELFYSMMEKNEVSWNAM 192
Query: 326 LGGLAMHGMGKAVVDMFPHMVEEVKP--DAVTFMALLSACSHSGLVEQGRQYFRDLESVY 383
+ G G + F +V P V + A+++ + VE F+D+
Sbjct: 193 ISGYIECGDLEKASHFF-----KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDM---- 243
Query: 384 EIRPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLA 440
+ + + M+ E+ L + M IRPN L S L C LQL
Sbjct: 244 TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLG 303
Query: 441 EKIVRELVEMDPLNTEYHILLS--NMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIY 496
+I ++V L + L S +MY G++ A V+KK+ + M S Y
Sbjct: 304 RQI-HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 349 bits (895), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 205/602 (34%), Positives = 321/602 (53%), Gaps = 50/602 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ +H++ V S + F N +L +Y+ C A+ +F E+ S + V YT++I
Sbjct: 315 GRAVHSIG-VKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREM--SDRSVVSYTSMIA 370
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R E+++LF EM + G+S D R + G +VH + + G
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V NA+MD+Y K G + EA VF E+ V ++S
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS------------------------- 465
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
W +I GY N + EA L ++ F + T+ VL AC+ GR
Sbjct: 466 ------WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HG+ ++ G+ V SLVDMYAKCG + +A ++F +++ +++V+W ++ G MH
Sbjct: 520 EIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 578
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G GK + +F M + ++ D ++F++LL ACSHSGLV++G ++F + +I P +EH
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
YAC+VD+L R G L +A ++ MPI P+ + G+LL C H ++LAEK+ ++ E++
Sbjct: 639 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P NT Y++L++N+YA + K E+ R+ + +RG+RK PG S I + G+++ F AGD S+
Sbjct: 699 PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSN 758
Query: 512 PRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLAL 571
P T I L + R+ GY P T ++ D E E E+ L HSEKLA+
Sbjct: 759 PETENIEAFLRKVRARMIEEGYSPLTKYALI-------DAEEM--EKEEALCGHSEKLAM 809
Query: 572 CFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSD 631
G+IS+ G + + KNLR+C DCH K S + +REIV+RD RFH FK G CSC
Sbjct: 810 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 869
Query: 632 YW 633
+W
Sbjct: 870 FW 871
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 197/416 (47%), Gaps = 42/416 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDE--IPQSHKDSVDYTAL 94
GK++ G + NL + +++ Y C A ++FDE I ++ ++ L
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNEL 170
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
+ S+ LF +M G+ +D L + G Q+H ++K GFG+
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
V N+++ Y+K + V+S R VFD M ER
Sbjct: 231 SVGNSLVAFYLKN-------------------------------QRVDSARKVFDEMTER 259
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
+ ++W +I GYV NG ++ + +M+ G E++ T+ SV + C+ S + +GR V
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
H VKA + +L+DMY+KCG + A VF+ MS R+VV++ +++ G A G+
Sbjct: 319 HSIGVKAC-FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 335 GKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYA 393
V +F M EE + PD T A+L+ C+ L+++G++ ++ ++ +I
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE-NDLGFDIFVSN 436
Query: 394 CMVDLLGRAGHLEEAELLVKKMPIRPN---EVVLGSLLGSCYAHGKLQLAEKIVRE 446
++D+ + G ++EAEL+ +M ++ ++G +CYA+ L L ++ E
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEE 492
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 159/375 (42%), Gaps = 74/375 (19%)
Query: 138 GPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVK 197
G +V + + GF + + + + +Y G L EA +VF E+++ + W +++
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILM----- 167
Query: 198 WEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCS 257
NE+A + G +G L K+M+ G E++ T
Sbjct: 168 -----------------NELAKSGDFSGSIG---------LFKKMM-SSGVEMDSYTFSC 200
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR 317
V + S V G +HGF +K+ G+ VG SLV Y K R+ A VF M+ R
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKS-GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 318 NVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYF 376
+V++WN+++ G +G+ + + +F M V ++ D T +++ + C+ S L+ GR
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 377 R-------------------------DLESVYEIRPEIEH-----YACMVDLLGRAGHLE 406
DL+S + E+ Y M+ R G
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG 379
Query: 407 EAELLVKKMP---IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSN 463
EA L ++M I P+ + ++L C A +L K V E ++ + L + I +SN
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCC-ARYRLLDEGKRVHEWIKENDLG--FDIFVSN 436
Query: 464 ----MYALSGKVEKA 474
MYA G +++A
Sbjct: 437 ALMDMYAKCGSMQEA 451
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 248 FELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
++++ TLCSVL C+ S + G+ V F ++ G+ + +G+ L MY CG + A
Sbjct: 90 WDIDPRTLCSVLQLCADSKSLKDGKEVDNF-IRGNGFVIDSNLGSKLSLMYTNCGDLKEA 148
Query: 308 LVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHS 366
VF + + WN ++ LA G + +F M+ V+ D+ TF + + S
Sbjct: 149 SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 367 GLVEQGRQ 374
V G Q
Sbjct: 209 RSVHGGEQ 216
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 202/607 (33%), Positives = 337/607 (55%), Gaps = 26/607 (4%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALP--SHARKLFDEIPQSHKDSVDYTALI 95
KQ+H GL S ++ ++ +P +AR++ + P ++ +TA+I
Sbjct: 66 KQIHGHVLRKGLDQS--CYILTKLIRTLTKLGVPMDPYARRVIE--PVQFRNPFLWTAVI 121
Query: 96 R----RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
R E++ ++ MR+ ++ + D N+G Q H+ +
Sbjct: 122 RGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF 181
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
V N ++D+YVK + ARKVF E+ V+SWT ++ + +E +F+ +
Sbjct: 182 CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
P ++ VAWT M+ G+ N +EA M G + VT+ +SAC+Q G
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRME-KSGIRADEVTVAGYISACAQLGASKYA 300
Query: 272 RWVHGFAVKAMGWDLG--VMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
A K+ G+ V++G++L+DMY+KCG + A+ VF +M+ +NV +++++ GL
Sbjct: 301 DRAVQIAQKS-GYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGL 359
Query: 330 AMHGMGKAVVDMFPHMVE--EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRP 387
A HG + + +F +MV E+KP+ VTF+ L ACSHSGLV+QGRQ F + + ++P
Sbjct: 360 ATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQP 419
Query: 388 EIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+HY CMVDLLGR G L+EA L+K M + P+ V G+LLG+C H ++AE L
Sbjct: 420 TRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHL 479
Query: 448 VEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIY-VDGQLHQFSA 506
E++P +ILLSN+YA +G R+++K++G++K P +S + +GQ+H+F
Sbjct: 480 FELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFP 539
Query: 507 GDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHS 566
G+ +HP +++I KL++++ RL + GY P+ + S D ++ + + +L H+
Sbjct: 540 GNLNHPMSNKIQDKLEELVERLTVLGYQPDLS-------SVPYDVSDNAKRL--ILIQHT 590
Query: 567 EKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGS 626
EKLAL F L++T+ S + I KNLR+C DCH +++AS + + I++RD RFH F+ G
Sbjct: 591 EKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGD 650
Query: 627 CSCSDYW 633
CSC D+W
Sbjct: 651 CSCGDFW 657
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 18/245 (7%)
Query: 249 ELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCG--RISI 306
EL +L S L C + + +HG ++ G D + T L+ K G
Sbjct: 46 ELLVSSLISKLDDCINLNQI---KQIHGHVLRK-GLDQSCYILTKLIRTLTKLGVPMDPY 101
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSH 365
A V + + RN W AV+ G A+ G + M+ M EE+ P + TF ALL AC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 366 SGLVEQGRQYFRDLESVYEIRPEIEHYA--CMVDLLGRAGHLEEAELLVKKMPIRPNEVV 423
+ GRQ+ + +R Y M+D+ + ++ A + +MP R +V+
Sbjct: 162 MKDLNLGRQFH---AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER--DVI 216
Query: 424 LGSLLGSCYAH-GKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLK 482
+ L + YA G ++ A ++ L D + + +++ +A + K ++A + ++
Sbjct: 217 SWTELIAAYARVGNMECAAELFESLPTKDMV--AWTAMVTG-FAQNAKPQEALEYFDRME 273
Query: 483 KRGIR 487
K GIR
Sbjct: 274 KSGIR 278
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/578 (33%), Positives = 314/578 (54%), Gaps = 50/578 (8%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIE 109
++ + N +L++YA C ARK+F+++PQ +D V +T LI + P ++L F +
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQ--RDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
M + G S + G Q+H VK GF V +A++DLY ++GL
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ +A+ +VFD + RN+V+W +I G+
Sbjct: 212 MDDAQ-------------------------------LVFDALESRNDVSWNALIAGHARR 240
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVM 289
T++A L + M+ GF + + S+ ACS +G + G+WVH + +K+ G L
Sbjct: 241 SGTEKALELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAF 298
Query: 290 VGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-E 348
G +L+DMYAK G I A +F +++R+VV+WN++L A HG GK V F M
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
++P+ ++F+++L+ACSHSGL+++G Y+ +L I PE HY +VDLLGRAG L A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 409 ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALS 468
+++MPI P + +LL +C H +L + E+DP + H++L N+YA
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 469 GKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRL 528
G+ A R+ +K+ G++K P S + ++ +H F A D+ HP+ EI K ++++ ++
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
Query: 529 RLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFK 588
+ GYVP+T+ V+ +E E L HSEK+AL F L++T GS ++I K
Sbjct: 538 KELGYVPDTS-HVIVHVDQ--------QEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588
Query: 589 NLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGS 626
N+R+C DCH+AIK+AS + REI+VRD RFH FK S
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 44/303 (14%)
Query: 138 GPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVK 197
G VH+ +++ F + N ++++Y K G L EARKVF ++ V+WT ++ G +
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 198 WEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCS 257
+ + F+ M + GY N F TL S
Sbjct: 139 HDRPCDALLFFNQM----------LRFGYSPNEF----------------------TLSS 166
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR 317
V+ A + C G +HGF VK G+D V VG++L+D+Y + G + A +VF + R
Sbjct: 167 VIKAAAAERRGCCGHQLHGFCVKC-GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225
Query: 318 NVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYF 376
N V+WNA++ G A + +++F M+ + +P ++ +L ACS +G +EQG+
Sbjct: 226 NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV- 284
Query: 377 RDLESVYEIRPEIEHYA----CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCY 432
Y I+ + A ++D+ ++G + +A + ++ R + V SLL +
Sbjct: 285 ----HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR-DVVSWNSLLTAYA 339
Query: 433 AHG 435
HG
Sbjct: 340 QHG 342
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 207/616 (33%), Positives = 323/616 (52%), Gaps = 32/616 (5%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQLH A + ++ N+F+ N ++ +YA C + A +F + S KD V + A++
Sbjct: 248 GKQLHCFAVTSEMIQ--NMFVGNCLVDMYAKCGMMDEANTVFSNM--SVKDVVSWNAMVA 303
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ ++++LF +M++ + +D + G V ++ G
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFG-EIEVP----------SVVSWTVVLDGVVKWEGV 201
+V+ G L +++ I+ P + ++D K + V
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 202 ESGRVVFDGMP--ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVF-GCGFELNCVTLCSV 258
++ R +FD + ER+ V WTVMI GY +G +A LL EM C N T+
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 259 LSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRN 318
L AC+ + +G+ +H +A++ + + V L+DMYAKCG IS A +VF NM +N
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 319 VVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFR 377
V W +++ G MHG G+ + +F M K D VT + +L ACSHSG+++QG +YF
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 378 DLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKL 437
+++V+ + P EHYAC+VDLLGRAG L A L+++MP+ P VV + L C HGK+
Sbjct: 604 RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKV 663
Query: 438 QLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV 497
+L E ++ E+ + + LLSN+YA +G+ + R +++ +G++K PG S +
Sbjct: 664 ELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEG 723
Query: 498 DGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEE 557
F GDK+HP EIY L D + R++ GYVP T F D EE
Sbjct: 724 IKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETG----FALHDVDD-----EE 774
Query: 558 VEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRY 617
+ +LF HSEKLAL +G+++T G+ + I KNLR+C DCH+A S I +I++RD
Sbjct: 775 KDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSS 834
Query: 618 RFHSFKQGSCSCSDYW 633
RFH FK GSCSC YW
Sbjct: 835 RFHHFKNGSCSCKGYW 850
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 230/490 (46%), Gaps = 40/490 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ HA++ VTG +S N+F+ NA++ +Y+ C S ARK+FDE+ S D V + ++I
Sbjct: 146 GESAHALSLVTGFIS--NVFVGNALVAMYSRCRSLSDARKVFDEM--SVWDVVSWNSIIE 201
Query: 96 ---RRCPPLESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
+ P +L++F M + G D LG ++G Q+H V
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ V N ++D+Y K G++ EA VF + V VVSW ++ G + E +F+ M
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 212 PER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGD 267
E + V W+ I GY G EA + ++M+ G + N VTL SVLS C+ G
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML-SSGIKPNEVTLISVLSGCASVGA 380
Query: 268 VCVGRWVHGFAVK------AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS--RRNV 319
+ G+ +H +A+K G MV L+DMYAKC ++ A +F ++S R+V
Sbjct: 381 LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDV 440
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVEE---VKPDAVTFMALLSACSHSGLVEQGRQYF 376
V W ++GG + HG +++ M EE +P+A T L AC+ + G+Q
Sbjct: 441 VTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQI- 499
Query: 377 RDLESVYEIRPEIEHYA-----CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSC 431
Y +R + C++D+ + G + +A L+ M + NEV SL+
Sbjct: 500 ----HAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGY 554
Query: 432 YAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYAL--SGKVEKA-NSFRRVLKKRGIRK 488
HG + A I E+ + + LL +YA SG +++ F R+ G+
Sbjct: 555 GMHGYGEEALGIFDEMRRIG-FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
Query: 489 VPGMSSIYVD 498
P + VD
Sbjct: 614 GPEHYACLVD 623
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 12/240 (5%)
Query: 219 WTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFA 278
W +I Y NG + +L ++ + + T V AC + V G H +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFG-LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 279 VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAV 338
+ G+ V VG +LV MY++C +S A VF MS +VV+WN+++ A G K
Sbjct: 154 L-VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212
Query: 339 VDMFPHMVEEV--KPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMV 396
++MF M E +PD +T + +L C+ G G+Q E+ + C+V
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQ-LHCFAVTSEMIQNMFVGNCLV 271
Query: 397 DLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAH-----GKLQLAEKIVRELVEMD 451
D+ + G ++EA + M ++ +VV + + + Y+ ++L EK+ E ++MD
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVK--DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 219/608 (36%), Positives = 310/608 (50%), Gaps = 61/608 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQ+HA+A G + ++F+ + +Y L ARKLFDEIP+ + ++ + A I
Sbjct: 127 GKQIHALAVKCGRIL--DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET--WNAFIS 182
Query: 97 RC----PPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
P E+++ FIE R++ + N+G Q+H V++ GF
Sbjct: 183 NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 242
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
VCN ++D Y K + + S ++F M
Sbjct: 243 DVSVCNGLIDFYGK-------------------------------CKQIRSSEIIFTEMG 271
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLL----KEMVFGCGFELNCVTLCSVLSACSQSGDV 268
+N V+W ++ YV N ++A L K++V E + + SVLSAC+ +
Sbjct: 272 TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV-----ETSDFMISSVLSACAGMAGL 326
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
+GR +H AVKA + + VG++LVDMY KCG I + F M +N+V N+++GG
Sbjct: 327 ELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 385
Query: 329 LAMHGMGKAVVDMFPHMVEE---VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI 385
A G + +F M P+ +TF++LLSACS +G VE G + F + S Y I
Sbjct: 386 YAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGI 445
Query: 386 RPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVR 445
P EHY+C+VD+LGRAG +E A +KKMPI+P V G+L +C HGK QL
Sbjct: 446 EPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE 505
Query: 446 ELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFS 505
L ++DP ++ H+LLSN +A +G+ +AN+ R LK GI+K G S I V Q+H F
Sbjct: 506 NLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQ 565
Query: 506 AGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAH 565
A D+SH EI L + + AGY P+ + D E EE + H
Sbjct: 566 AKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLY-------DLEE--EEKAAEVSHH 616
Query: 566 SEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQG 625
SEKLAL FGL+S P+ I KNLRIC DCHS K S KREI+VRD RFH FK G
Sbjct: 617 SEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDG 676
Query: 626 SCSCSDYW 633
CSC DYW
Sbjct: 677 ICSCKDYW 684
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 15/279 (5%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
NA+ ++ G + AR V P +++ K + ES R+V P RN V
Sbjct: 15 NAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVV 74
Query: 218 AWTVMIVGYVGNGFTKEA----FWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
+WT +I G NG A F + +E V F C A + G+
Sbjct: 75 SWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCA-----FKAVASLRLPVTGKQ 129
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
+H AVK G L V VG S DMY K A +F + RN+ WNA + G
Sbjct: 130 IHALAVKC-GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 334 MGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQ-YFRDLESVYEIRPEIEH 391
+ ++ F + P+++TF A L+ACS + G Q + L S ++ ++
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT--DVSV 246
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGS 430
++D G+ + +E++ +M + N V SL+ +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 284
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 317/594 (53%), Gaps = 55/594 (9%)
Query: 51 SSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPL-----ESLQ 105
S + FL ++ +Y+ +ARK+FD ++ K ++ + R L E L
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFD---KTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 106 LFIEMRQLGLSIDXXXXXXX----XXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
L+ +M ++G+ D + G ++H+ + + G+ + ++
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLV 224
Query: 162 DLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTV 221
D+Y +FG + A VFG GMP RN V+W+
Sbjct: 225 DMYARFGCVDYASYVFG-------------------------------GMPVRNVVSWSA 253
Query: 222 MIVGYVGNGFTKEAFWLLKEMVFGC-GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVK 280
MI Y NG EA +EM+ N VT+ SVL AC+ + G+ +HG+ ++
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 281 AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVD 340
G D + V ++LV MY +CG++ + VF M R+VV+WN+++ +HG GK +
Sbjct: 314 R-GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 372
Query: 341 MFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLL 399
+F M+ P VTF+++L ACSH GLVE+G++ F + + I+P+IEHYACMVDLL
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 432
Query: 400 GRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHI 459
GRA L+EA +V+ M P V GSLLGSC HG ++LAE+ R L ++P N ++
Sbjct: 433 GRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYV 492
Query: 460 LLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYL 519
LL+++YA + ++ +++L+ RG++K+PG + V +++ F + D+ +P +I+
Sbjct: 493 LLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHA 552
Query: 520 KLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTS 579
L + ++ GY+P T VL+ + EE E+++ HSEKLAL FGLI+TS
Sbjct: 553 FLVKLAEDMKEKGYIPQTK-GVLYELET--------EEKERIVLGHSEKLALAFGLINTS 603
Query: 580 SGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
G P+ I KNLR+C+DCH K S ++EI+VRD RFH FK G CSC DYW
Sbjct: 604 KGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 7/171 (4%)
Query: 283 GWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMF 342
G D + T L+ MY+ G + A VF +R + WNA+ L + G G+ V+ ++
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 343 PHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACM---VDL 398
M V+ D T+ +L AC S +++ + R H M VD+
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 399 LGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYA-HGKLQLAEKIVRELV 448
R G ++ A + MP+R VV S + +CYA +GK A + RE++
Sbjct: 227 YARFGCVDYASYVFGGMPVR--NVVSWSAMIACYAKNGKAFEALRTFREMM 275
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 201/585 (34%), Positives = 305/585 (52%), Gaps = 49/585 (8%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIE 109
++ L N +++ Y+ C AR++FD + + + V + +I R E+L +F+E
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLE--RSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
MR G D ++H VK V A++DLY K G+
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ +A +VF + M +++ V W+ M+ GYV N
Sbjct: 213 IKDAVQVF-------------------------------ESMQDKSSVTWSSMVAGYVQN 241
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVM 289
+EA LL E N TL SV+ ACS + G+ +H K+ G+ V
Sbjct: 242 KNYEEAL-LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-GFGSNVF 299
Query: 290 VGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE- 348
V +S VDMYAKCG + + ++F + +N+ WN ++ G A H K V+ +F M ++
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
+ P+ VTF +LLS C H+GLVE+GR++F+ + + Y + P + HY+CMVD+LGRAG L EA
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
Query: 409 ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALS 468
L+K +P P + GSLL SC + L+LAE +L E++P N H+LLSN+YA +
Sbjct: 420 YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAAN 479
Query: 469 GKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRL 528
+ E+ R++L+ ++KV G S I + ++H FS G+ HPR EI LD+++ +
Sbjct: 480 KQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKF 539
Query: 529 RLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFK 588
R GY P+ ++ + + E++L HSEKLAL FGL+ SP+ I K
Sbjct: 540 RKFGYKPSVEHELH---------DVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMK 590
Query: 589 NLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
NLRIC DCH +K AS +R I+VRD RFH F G CSC D+W
Sbjct: 591 NLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 40/310 (12%)
Query: 160 VMDLYVKFGLLGEARKVFGEI----EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERN 215
++ L + G + EA+ G+I V V+++ K VE R VFDGM ER+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 216 EVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVH 275
V+W MI Y N EA + EM GF+ + T+ SVLSAC + D + +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMR-NEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 276 GFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMG 335
+VK DL + VGT+L+D+YAKCG I A+ VF++M ++ V W++++ G +
Sbjct: 186 CLSVKTC-IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 336 KAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQ-------------------- 374
+ + ++ ++ + T +++ ACS+ + +G+Q
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 375 ---YFR--DLESVYEIRPEI-----EHYACMVDLLGRAGHLEEAELLVKKMP---IRPNE 421
Y + L Y I E+ E + ++ + +E +L +KM + PNE
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 422 VVLGSLLGSC 431
V SLL C
Sbjct: 365 VTFSSLLSVC 374
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 158/383 (41%), Gaps = 58/383 (15%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI-- 95
K+LH ++ T + NL++ A+L +YA C + A ++F+ + K SV +++++
Sbjct: 182 KKLHCLSVKTCI--DLNLYVGTALLDLYAKCGMIKDAVQVFESMQD--KSSVTWSSMVAG 237
Query: 96 --RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
+ E+L L+ +++ L + L G Q+H+ + K GFG
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN 297
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
V ++ +D+Y K G L E+ +F E++ ++ W ++ G K + ++F+ M +
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
G N VT S+LS C +G V GR
Sbjct: 358 D--------------------------------GMHPNEVTFSSLLSVCGHTGLVEEGRR 385
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA-WNAVLGGLAMH 332
G V+ + +VD+ + G +S A + K++ + W ++L ++
Sbjct: 386 FFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVY 445
Query: 333 GMGKAVVDMFPHMVEEVKPDAVTFMALLS----ACSHSGLVEQGRQYFRDLE-------S 381
+ ++ + E++P+ LLS A + + R+ RD + S
Sbjct: 446 K-NLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKS 504
Query: 382 VYEIRPEIEHYACMVDLLGRAGH 404
+I+ ++ ++ +G +GH
Sbjct: 505 WIDIKDKVHTFS-----VGESGH 522
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 207/567 (36%), Positives = 301/567 (53%), Gaps = 47/567 (8%)
Query: 103 SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCN-AVM 161
S++ FI M +LG+ D +LG +G +H+ +K F C +++
Sbjct: 110 SVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK-NFVDCDSFVRLSLV 168
Query: 162 DLYVKFGLLGEARKVFGE----IEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
D+Y K G L A +VF E I+ S++ W V+++G + + + +F MPERN
Sbjct: 169 DMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSG 228
Query: 218 AWTVMIVGYVGNG---FTKEAFWLLKEM---------------------------VFGCG 247
+W+ +I GYV +G K+ F L+ E + G
Sbjct: 229 SWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKG 288
Query: 248 FELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
+ N T+ +VLSACS+SG + G +HG+ + G L +GT+LVDMYAKCG + A
Sbjct: 289 LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN-GIKLDRAIGTALVDMYAKCGELDCA 347
Query: 308 LVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHS 366
VF NM+ +++++W A++ G A+HG + F M+ KPD V F+A+L+AC +S
Sbjct: 348 ATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNS 407
Query: 367 GLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGS 426
V+ G +F + Y I P ++HY +VDLLGRAG L EA LV+ MPI P+ +
Sbjct: 408 SEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAA 467
Query: 427 LLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGI 486
L +C AH + AE + + L+E+DP +I L +A G ++ R L+KR
Sbjct: 468 LYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIK 527
Query: 487 RKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCS 546
+ G S I +DGQL++FSAGD SH T EI LKLD++I GY P +
Sbjct: 528 ERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSI----- 582
Query: 547 SSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNI 606
D E EE E V HSEKLAL G + T+ G+ + I KNLRIC DCHS +K S I
Sbjct: 583 --HDIEE--EEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKI 638
Query: 607 YKREIVVRDRYRFHSFKQGSCSCSDYW 633
+R+I++RD +FH FK G CSC DYW
Sbjct: 639 SQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 203/589 (34%), Positives = 311/589 (52%), Gaps = 50/589 (8%)
Query: 50 LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCP----PLESLQ 105
L N + N+++ AC + A +LF + KDSV + A+I+ E+++
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGM---EKDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 106 LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYV 165
F EM+ GL +D LG N G Q+H+ +++ F V +A++D+Y
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 166 KFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVG 225
K L A+ VFD M ++N V+WT M+VG
Sbjct: 317 KCKCLHYAK-------------------------------TVFDRMKQKNVVSWTAMVVG 345
Query: 226 YVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWD 285
Y G +EA + +M G + + TL +SAC+ + G HG A+ + G
Sbjct: 346 YGQTGRAEEAVKIFLDMQ-RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS-GLI 403
Query: 286 LGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM 345
V V SLV +Y KCG I + +F M+ R+ V+W A++ A G + +F M
Sbjct: 404 HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463
Query: 346 VEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGH 404
V+ +KPD VT ++SACS +GLVE+G++YF+ + S Y I P I HY+CM+DL R+G
Sbjct: 464 VQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGR 523
Query: 405 LEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNM 464
LEEA + MP P+ + +LL +C G L++ + L+E+DP + + LLS++
Sbjct: 524 LEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSI 583
Query: 465 YALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDM 524
YA GK + RR ++++ ++K PG S I G+LH FSA D+S P +IY KL+++
Sbjct: 584 YASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEEL 643
Query: 525 ICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPL 584
++ GY P+T+ D EA++ ++L HSE+LA+ FGLI SG P+
Sbjct: 644 NNKIIDNGYKPDTSF-------VHHDVEEAVK--VKMLNYHSERLAIAFGLIFVPSGQPI 694
Query: 585 YIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
+ KNLR+C DCH+A K S++ REI+VRD RFH FK G+CSC D+W
Sbjct: 695 RVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 199/446 (44%), Gaps = 54/446 (12%)
Query: 50 LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSH------------------------ 85
L P FL N I+H YA ++AR++FD IPQ +
Sbjct: 36 LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 86 -----KDSVDYTALIRRCPPLESLQLFIE-----MRQLGLSIDXXXXXXXXXXXXRLGDP 135
+D V + LI + ++ MR ++ G
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 136 NVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGV 195
++G Q+H V+K GF V + ++ +Y G + +A+KVF ++ + V + ++ G+
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 196 VKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTL 255
+ +E +F GM E++ V+W MI G NG KEA +EM G +++
Sbjct: 216 LACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ-GLKMDQYPF 273
Query: 256 CSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
SVL AC G + G+ +H ++ D + VG++L+DMY KC + A VF M
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQD-HIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQ 374
++NVV+W A++ G G + V +F M + PD T +SAC++ +E+G Q
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 375 YFRDLESVYEIRPEIEHYAC----MVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGS 430
+ I + HY +V L G+ G ++++ L +M +R + V + + S
Sbjct: 393 FHGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR--DAVSWTAMVS 445
Query: 431 CYAH-----GKLQLAEKIVRELVEMD 451
YA +QL +K+V+ ++ D
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPD 471
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 170/350 (48%), Gaps = 14/350 (4%)
Query: 141 VHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEG 200
+H +++ T + N ++ Y AR+VF I P++ SW +L K
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
+ F+ +P+R+ V W V+I GY +G A M+ L VTL ++L
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
S +G V +G+ +HG +K +G++ ++VG+ L+ MYA G IS A VF + RN V
Sbjct: 148 LSSSNGHVSLGKQIHGQVIK-LGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTV 206
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLE 380
+N+++GGL GM + + +F M + D+V++ A++ + +GL ++ + FR+++
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGM----EKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 381 SVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPN---EVVLGSLLGSCYAHGK- 436
V ++ + + ++ G G + E + + IR N + +GS L Y K
Sbjct: 263 -VQGLKMDQYPFGSVLPACGGLGAINEGK-QIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 437 LQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGI 486
L A+ + + + + ++ ++ Y +G+ E+A +++ GI
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVV---GYGQTGRAEEAVKIFLDMQRSGI 367
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 208/600 (34%), Positives = 319/600 (53%), Gaps = 48/600 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTA--L 94
G QLH +GL P + N +++ Y+ LP +R+ F++ PQ +
Sbjct: 34 GLQLHGYVVKSGLSLIP--LVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCF 91
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
+ P SL+ +M L D L ++G VH +K G+
Sbjct: 92 AQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADV 151
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
V ++++D+Y K G + ARK+F E MP+R
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDE-------------------------------MPQR 180
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
N V W+ M+ GY G +EA WL KE +F +N + SV+S C+ S + +GR +
Sbjct: 181 NVVTWSGMMYGYAQMGENEEALWLFKEALFE-NLAVNDYSFSSVISVCANSTLLELGRQI 239
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
HG ++K+ D VG+SLV +Y+KCG A VF + +N+ WNA+L A H
Sbjct: 240 HGLSIKSSF-DSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSH 298
Query: 335 GKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYA 393
+ V+++F M + +KP+ +TF+ +L+ACSH+GLV++GR YF ++ I P +HYA
Sbjct: 299 TQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYA 357
Query: 394 CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPL 453
+VD+LGRAG L+EA ++ MPI P E V G+LL SC H +LA ++ E+ P+
Sbjct: 358 SLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPV 417
Query: 454 NTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPR 513
++ HI LSN YA G+ E A R++L+ RG +K G+S + ++H F+AG++ H +
Sbjct: 418 SSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEK 477
Query: 514 TSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCF 573
+ EIY KL ++ + AGY+ +T+ + GD E Q + HSE+LA+ F
Sbjct: 478 SKEIYEKLAELGEEMEKAGYIADTSYVLR---EVDGD------EKNQTIRYHSERLAIAF 528
Query: 574 GLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
GLI+ + P+ + KNLR+C DCH+AIK S +R I+VRD RFH F+ G CSC+DYW
Sbjct: 529 GLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 215/675 (31%), Positives = 333/675 (49%), Gaps = 96/675 (14%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+QLHA T G S N + A+L++YA CA A F E ++ V + ++
Sbjct: 408 GQQLHAYTTKLGFAS--NNKIEGALLNLYAKCADIETALDYFLETEV--ENVVLWNVMLV 463
Query: 97 RCPPLE----SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
L+ S ++F +M+ + + RLGD +G Q+HS ++K F
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
VC+ ++D+Y K G L A + VVSWT ++ G ++ + F M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 213 ER----NEVAWTVMIVGYVG----------------NGFTKEAFW--LLKEMVFGCG--- 247
+R +EV T + G +GF+ + + L + CG
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 248 -----FEL----NCVTLCSVLSACSQSGD---------------VCVGRWVHGFAVKA-- 281
FE + + +++S QSG+ + + G AVKA
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 282 -----------------MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNA 324
G+D V +L+ MYAKCG IS A F +S +N V+WNA
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 325 VLGGLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVY 383
++ + HG G +D F M+ V+P+ VT + +LSACSH GLV++G YF + S Y
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 384 EIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKI 443
+ P+ EHY C+VD+L RAG L A+ +++MPI+P+ +V +LL +C H +++ E
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 444 VRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQ 503
L+E++P ++ ++LLSN+YA+S K + + R+ +K++G++K PG S I V +H
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Query: 504 FSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQ--- 560
F GD++HP EI+ D+ R GYV DC L E++
Sbjct: 944 FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQ--------------DCFSLLNELQHEQK 989
Query: 561 --VLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYR 618
++F HSEKLA+ FGL+S + P+ + KNLR+C DCH+ IK S + REI+VRD YR
Sbjct: 990 DPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYR 1049
Query: 619 FHSFKQGSCSCSDYW 633
FH F+ G+CSC DYW
Sbjct: 1050 FHHFEGGACSCKDYW 1064
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 171/374 (45%), Gaps = 68/374 (18%)
Query: 136 NVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGV 195
+V Q+H+ ++ G T VCN ++DLY + G + AR+VF
Sbjct: 204 DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF------------------ 245
Query: 196 VKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTL 255
DG+ ++ +W MI G N EA L +M + G
Sbjct: 246 -------------DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM-YVLGIMPTPYAF 291
Query: 256 CSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
SVLSAC + + +G +HG +K +G+ V +LV +Y G + A +F NMS
Sbjct: 292 SSVLSACKKIESLEIGEQLHGLVLK-LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQ 374
+R+ V +N ++ GL+ G G+ +++F M ++ ++PD+ T +L+ ACS G + +G+Q
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 375 -----------------------YFR--DLESV--YEIRPEIEH---YACMVDLLGRAGH 404
Y + D+E+ Y + E+E+ + M+ G
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 405 LEEAELLVKKMPIR---PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD-PLNTEYHIL 460
L + + ++M I PN+ S+L +C G L+L E+I ++++ + LN +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 461 LSNMYALSGKVEKA 474
L +MYA GK++ A
Sbjct: 531 LIDMYAKLGKLDTA 544
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 168/385 (43%), Gaps = 50/385 (12%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI-- 95
+Q+HA GL S + N ++ +Y+ AR++FD + KD + A+I
Sbjct: 207 EQIHARILYQGLRDST--VVCNPLIDLYSRNGFVDLARRVFDGLRL--KDHSSWVAMISG 262
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
C E+++LF +M LG+ ++ +G Q+H V+K GF
Sbjct: 263 LSKNECEA-EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
T VCNA++ LY G L A +F M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFS-------------------------------NMS 350
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+R+ V + +I G G+ ++A L K M G E + TL S++ ACS G + G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H + K +G+ + +L+++YAKC I AL F NVV WN +L +
Sbjct: 410 QLHAYTTK-LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 333 GMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
+ +F M +EE+ P+ T+ ++L C G +E G Q + + ++
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTNFQLNA 525
Query: 392 YAC--MVDLLGRAGHLEEA-ELLVK 413
Y C ++D+ + G L+ A ++L++
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIR 550
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 123/305 (40%), Gaps = 40/305 (13%)
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
VFD MPER W MI E F L MV N T VL AC + G
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMV-SENVTPNEGTFSGVLEAC-RGG 199
Query: 267 DVC--VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNA 324
V V +H + G +V L+D+Y++ G + +A VF + ++ +W A
Sbjct: 200 SVAFDVVEQIHA-RILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 325 VLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQ--------- 374
++ GL+ + + +F M V + P F ++LSAC +E G Q
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 375 --------------YFR--DLESVYEIRPEIEH-----YACMVDLLGRAGHLEEAELLVK 413
YF +L S I + Y +++ L + G+ E+A L K
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 414 KMP---IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD-PLNTEYHILLSNMYALSG 469
+M + P+ L SL+ +C A G L +++ ++ N + L N+YA
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 470 KVEKA 474
+E A
Sbjct: 439 DIETA 443
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 156/394 (39%), Gaps = 68/394 (17%)
Query: 247 GFELNCVTLCSVLSAC-SQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRIS 305
G N TL +L C +G + GR +H +K +G D + L D Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK-LGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 306 IALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACS 364
A VF M R + WN ++ LA + V +F MV E V P+ TF +L AC
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 365 ------------HSGLVEQG----------------RQYFRDL-ESVYEIRPEIEHYACM 395
H+ ++ QG R F DL V++ +H + +
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 396 VDLLGRAGHLEEAELL-----VKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
+ G + + EAE + + + I P S+L +C L++ E++ ++++
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 451 DPLNTEY--HILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
+ Y + L+S + L + + F + ++ + + ++G L Q G+
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV-----TYNTLING-LSQCGYGE 371
Query: 509 KSHPRTSEIYLKLDDMICRLRLAGYVP--NTTCQVLFGCSSSGDCTEALEEVEQVLFAHS 566
K+ ++ R+ L G P NT ++ CS+ G Q L A++
Sbjct: 372 KAM-----------ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG-----QQLHAYT 415
Query: 567 EKLALCFGLISTSSGSPLYIFKNLRICQDCHSAI 600
KL F + G+ L ++ C D +A+
Sbjct: 416 TKLG--FASNNKIEGALLNLYAK---CADIETAL 444
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 305/575 (53%), Gaps = 52/575 (9%)
Query: 67 ACALP---SHARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQLFIEMRQLGLSIDX 119
C +P R++F+ +P+ KD V Y +I ++L++ EM L D
Sbjct: 185 TCIMPFGIDSVRRVFEVMPR--KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242
Query: 120 XXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGE 179
D G ++H V++ G + ++++D+Y K + ++ +VF
Sbjct: 243 FTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSR 302
Query: 180 IEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLL 239
+ R+ ++W ++ GYV NG EA L
Sbjct: 303 LYC-------------------------------RDGISWNSLVAGYVQNGRYNEALRLF 331
Query: 240 KEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYA 299
++MV + V SV+ AC+ + +G+ +HG+ ++ G+ + + ++LVDMY+
Sbjct: 332 RQMV-TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG-GFGSNIFIASALVDMYS 389
Query: 300 KCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMA 358
KCG I A +F M+ + V+W A++ G A+HG G V +F M + VKP+ V F+A
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 449
Query: 359 LLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
+L+ACSH GLV++ YF + VY + E+EHYA + DLLGRAG LEEA + KM +
Sbjct: 450 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVE 509
Query: 419 PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFR 478
P V +LL SC H L+LAEK+ ++ +D N ++L+ NMYA +G+ ++ R
Sbjct: 510 PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLR 569
Query: 479 RVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTT 538
++K+G+RK P S I + + H F +GD+SHP +I L ++ ++ GYV +T+
Sbjct: 570 LRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTS 629
Query: 539 CQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHS 598
VL D E E ++LF HSE+LA+ FG+I+T G+ + + KN+RIC DCH
Sbjct: 630 -GVLH------DVDE--EHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHV 680
Query: 599 AIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
AIK S I +REI+VRD RFH F +G+CSC DYW
Sbjct: 681 AIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 200/421 (47%), Gaps = 51/421 (12%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
++L F+EMR G D + D G VH +V+ G NA+M
Sbjct: 88 KALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALM 147
Query: 162 DLYVKFGLLGEARKV-FGEI--EVPSVVSWTVVLDGVVKWE------GVESGRVVFDGMP 212
++Y K LLG K+ G + E+P S + D VK E G++S R VF+ MP
Sbjct: 148 NMYAK--LLGMGSKISVGNVFDEMPQRTSNSG--DEDVKAETCIMPFGIDSVRRVFEVMP 203
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
++ V++ +I GY +G ++A +++EM + + TL SVL S+ DV G+
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HG+ ++ G D V +G+SLVDMYAK RI + VF + R+ ++WN+++ G +
Sbjct: 263 EIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQY---------------- 375
G + +F MV +VKP AV F +++ AC+H + G+Q
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 376 ------------FRDLESVYEIRPEIEHYACMVDLLGRA--GHLEEAELLVKKMP---IR 418
+ +++ ++ + ++G A GH EA L ++M ++
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 419 PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNT--EYHILLSNMYALSGKVEKANS 476
PN+V ++L +C G + A + ++ LN E++ ++++ +GK+E+A +
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 477 F 477
F
Sbjct: 502 F 502
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 202/634 (31%), Positives = 326/634 (51%), Gaps = 83/634 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQ------------- 83
GK++H +G + P + + N +L +YA C ARK+FDE+P
Sbjct: 104 GKKVHEHIRTSGFV--PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGY 161
Query: 84 ----------------SHKDSVDYTALI----RRCPPLESLQLFIEMRQLGLSIDXXXXX 123
+ KDS +TA++ ++ P E+L L+ M+++
Sbjct: 162 AEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV---------- 211
Query: 124 XXXXXXXRLGDPNVGPQVHSGVVKFGFG---KCTRVCNAVMDLYVKFGLLGEARKVFGEI 180
PN P + + + KC R + V+ GL +
Sbjct: 212 -----------PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE------- 253
Query: 181 EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLK 240
V W+ ++D K ++ R +FD + E++ V+WT MI Y + +E F L
Sbjct: 254 -----VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS 308
Query: 241 EMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAK 300
E+V C N T VL+AC+ +G+ VHG+ + +G+D +SLVDMY K
Sbjct: 309 ELVGSCE-RPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTK 366
Query: 301 CGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMAL 359
CG I A V + ++V+W +++GG A +G + F +++ KPD VTF+ +
Sbjct: 367 CGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNV 426
Query: 360 LSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRP 419
LSAC+H+GLVE+G ++F + + + +HY C+VDLL R+G E+ + ++ +MP++P
Sbjct: 427 LSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP 486
Query: 420 NEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRR 479
++ + S+LG C +G + LAE+ +EL +++P N ++ ++N+YA +GK E+ R+
Sbjct: 487 SKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRK 546
Query: 480 VLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTC 539
+++ G+ K PG S + + H F A D SHP ++I L ++ +++ GYVP T+
Sbjct: 547 RMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSL 606
Query: 540 QVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSA 599
VL E+ E+ L HSEKLA+ F ++ST G+ + +FKNLR C DCH A
Sbjct: 607 -VLHDVED--------EQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGA 657
Query: 600 IKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
IK SNI KR+I VRD RFH F+ G CSC DYW
Sbjct: 658 IKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 202 ESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSA 261
E G VV + + N + ++ G +EA LL G + T C+++
Sbjct: 42 EDGGVVVERLCRANRFGEAIDVL--CGQKLLREAVQLL-----GRAKKPPASTYCNLIQV 94
Query: 262 CSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA 321
CSQ+ + G+ VH ++ G+ G+++ L+ MYAKCG + A VF M R++ +
Sbjct: 95 CSQTRALEEGKKVHEH-IRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCS 153
Query: 322 WNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
WN ++ G A G+ + +F M E+ D+ ++ A+++ E+ + ++
Sbjct: 154 WNVMVNGYAEVGLLEEARKLFDEMTEK---DSYSWTAMVTGYVKKDQPEEALVLYSLMQR 210
Query: 382 VYEIRPEI 389
V RP I
Sbjct: 211 VPNSRPNI 218
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 299/551 (54%), Gaps = 46/551 (8%)
Query: 88 SVDYTALIRRCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHS 143
+ D+ +IR + E+L + EM Q G D RL G Q+H
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHG 156
Query: 144 GVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVES 203
V K G V N+++++Y + G E+E+ S V
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCG----------EMELSSAV----------------- 189
Query: 204 GRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACS 263
F+ + + +W+ M+ G G E L + M + + S L AC+
Sbjct: 190 ----FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACA 245
Query: 264 QSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWN 323
+G + +G +HGF ++ + +L ++V TSLVDMY KCG + AL +F+ M +RN + ++
Sbjct: 246 NTGALNLGMSIHGFLLRNIS-ELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYS 304
Query: 324 AVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESV 382
A++ GLA+HG G++ + MF M++E ++PD V ++++L+ACSHSGLV++GR+ F ++
Sbjct: 305 AMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKE 364
Query: 383 YEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEK 442
++ P EHY C+VDLLGRAG LEEA ++ +PI N+V+ + L C ++L +
Sbjct: 365 GKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQI 424
Query: 443 IVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLH 502
+EL+++ N ++L+SN+Y+ + R + +G+++ PG S + + G+ H
Sbjct: 425 AAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTH 484
Query: 503 QFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVL 562
+F + D+SHP+ EIY L M +L+ GY P+ T Q+L EE ++ L
Sbjct: 485 RFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLT-QILLNVDE--------EEKKERL 535
Query: 563 FAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSF 622
HS+K+A+ FGL+ T GS + I +NLR+C DCH+ K S IY+REIVVRDR RFH F
Sbjct: 536 KGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLF 595
Query: 623 KQGSCSCSDYW 633
K G+CSC DYW
Sbjct: 596 KGGTCSCKDYW 606
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 13/262 (4%)
Query: 198 WEG-VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
WE + +F G+ + + MI GYV +EA EM+ G E + T
Sbjct: 78 WENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQR-GNEPDNFTYP 136
Query: 257 SVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR 316
+L AC++ + G+ +HG K +G + V V SL++MY +CG + ++ VF+ +
Sbjct: 137 CLLKACTRLKSIREGKQIHGQVFK-LGLEADVFVQNSLINMYGRCGEMELSSAVFEKLES 195
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQ 374
+ +W++++ A GM + +F M E +K + ++ L AC+++G + G
Sbjct: 196 KTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMS 255
Query: 375 -YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYA 433
+ L ++ E+ ++ +VD+ + G L++A + +KM R N + +++
Sbjct: 256 IHGFLLRNISELNIIVQ--TSLVDMYVKCGCLDKALHIFQKMEKR-NNLTYSAMISGLAL 312
Query: 434 HGK----LQLAEKIVRELVEMD 451
HG+ L++ K+++E +E D
Sbjct: 313 HGEGESALRMFSKMIKEGLEPD 334
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 331 bits (849), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 319/608 (52%), Gaps = 57/608 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+Q+H + G+ N+ + NA++ +YA + RK+F +P+ D V + ++I
Sbjct: 434 GQQIHGESLKLGI--DLNVSVSNALMTLYAETGYLNECRKIFSSMPE--HDQVSWNSIIG 489
Query: 96 -----RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
R P E++ F+ ++ G ++ L +G Q+H +K
Sbjct: 490 ALARSERSLP-EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNI 548
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
NA++ Y K G + K+F +
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMA----------------------------- 579
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
R+ V W MI GY+ N +A L+ M+ G L+ +VLSA + +
Sbjct: 580 -ERRDNVTWNSMISGYIHNELLAKALDLVWFML-QTGQRLDSFMYATVLSAFASVATLER 637
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
G VH +V+A + V+VG++LVDMY+KCGR+ AL F M RN +WN+++ G A
Sbjct: 638 GMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYA 696
Query: 331 MHGMGKAVVDMFPHMV--EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
HG G+ + +F M + PD VTF+ +LSACSH+GL+E+G ++F + Y + P
Sbjct: 697 RHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR 756
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGS-CYAHG-KLQLAEKIVRE 446
IEH++CM D+LGRAG L++ E ++KMP++PN ++ ++LG+ C A+G K +L +K
Sbjct: 757 IEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEM 816
Query: 447 LVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSA 506
L +++P N ++LL NMYA G+ E R+ +K ++K G S + + +H F A
Sbjct: 817 LFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVA 876
Query: 507 GDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHS 566
GDKSHP IY KL ++ ++R AGYVP T + D + E E++L HS
Sbjct: 877 GDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALY-------DLEQ--ENKEEILSYHS 927
Query: 567 EKLALCFGLISTSSGS-PLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQG 625
EKLA+ F L + S + P+ I KNLR+C DCHSA K S I R+I++RD RFH F+ G
Sbjct: 928 EKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDG 987
Query: 626 SCSCSDYW 633
+CSCSD+W
Sbjct: 988 ACSCSDFW 995
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 137/286 (47%), Gaps = 29/286 (10%)
Query: 203 SGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSAC 262
S R VFD MP RN V+W ++ GY NG KEA L++MV G N SVL AC
Sbjct: 54 SARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV-KEGIFSNQYAFVSVLRAC 112
Query: 263 SQSGDVCV--GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKC-GRISIALVVFKNMSRRNV 319
+ G V + GR +HG K + + + +V L+ MY KC G + AL F ++ +N
Sbjct: 113 QEIGSVGILFGRQIHGLMFK-LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNS 171
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALL-SACSHSGLVEQGRQYFR 377
V+WN+++ + G ++ +F M + +P TF +L+ +ACS L E
Sbjct: 172 VSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEP------ 222
Query: 378 DLESVYEIRPEIEHYACMVDL---------LGRAGHLEEAELLVKKMPIRPNEVVLGSLL 428
D+ + +I I+ + DL ++G L A + +M R N V L L+
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR-NAVTLNGLM 281
Query: 429 GSCYAHGKLQLAEKIVRELVEMDPLNTE-YHILLSNM--YALSGKV 471
+ A K+ ++ M ++ E Y ILLS+ Y+L+ +V
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV 327
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 125/554 (22%), Positives = 235/554 (42%), Gaps = 68/554 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+++H TGL+ + + N ++++YA C + AR++F + KDSV + ++I
Sbjct: 332 GREVHGHVITTGLVDFM-VGIGNGLVNMYAKCGSIADARRVF--YFMTDKDSVSWNSMIT 388
Query: 97 RCPP----LESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+E+++ + MR+ + L +G Q+H +K G
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V NA+M LY + G L E RK+F + VSW ++ + + E +P
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE---------RSLP 499
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
E +V ++ + A G +LN +T SVLSA S +G+
Sbjct: 500 E--------AVVCFLN---AQRA-----------GQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS-RRNVVAWNAVLGGLAM 331
+HG A+K D +L+ Y KCG + +F M+ RR+ V WN+++ G
Sbjct: 538 QIHGLALKNNIADEAT-TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 332 HGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+ + +D+ M++ + D+ + +LSA + +E+G + +R +E
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV-----HACSVRACLE 651
Query: 391 HY----ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRE 446
+ +VD+ + G L+ A MP+R N S++ HG+ + A K+ E
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLF-E 709
Query: 447 LVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIY-VDGQLHQFS 505
+++D H+ + + L + G + MS Y + ++ FS
Sbjct: 710 TMKLDGQTPPDHVTFVGVLSACSHAG--------LLEEGFKHFESMSDSYGLAPRIEHFS 761
Query: 506 AGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTC-QVLFG--CSSSGDCTEALEEVEQVL 562
R E+ KL+D I ++ + PN + + G C ++G E ++ ++L
Sbjct: 762 CMADVLGRAGELD-KLEDFIEKMPMK---PNVLIWRTVLGACCRANGRKAELGKKAAEML 817
Query: 563 FAHSEKLALCFGLI 576
F + A+ + L+
Sbjct: 818 FQLEPENAVNYVLL 831
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 11/247 (4%)
Query: 204 GRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEM--VFGCGFELNCVTLCSVLSA 261
R VF+ M RN V ++VG V + +EA L +M + E + V L S
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSSFPE 320
Query: 262 CSQSGDVCV--GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV 319
S + +V + GR VHG + D V +G LV+MYAKCG I+ A VF M+ ++
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQ-YFR 377
V+WN+++ GL +G V+ + M ++ P + T ++ LS+C+ + G+Q +
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 378 DLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKL 437
L+ ++ + + ++ L G+L E + MP ++V S++G+ A +
Sbjct: 441 SLKLGIDLNVSVSN--ALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA-LARSER 496
Query: 438 QLAEKIV 444
L E +V
Sbjct: 497 SLPEAVV 503
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 129/326 (39%), Gaps = 42/326 (12%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIE 109
+++L N +++ Y ARK+FDE+P ++ V + ++ R E+L +
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPL--RNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNV--GPQVHSGVVKFGFGKCTRVCNAVMDLYVK- 166
M + G+ + +G + G Q+H + K + V N ++ +Y K
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 167 FGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGY 226
G +G A FG+IEV +N V+W +I Y
Sbjct: 153 IGSVGYALCAFGDIEV-------------------------------KNSVSWNSIISVY 181
Query: 227 VGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG-DVCVGRWVHGFAVKAMGWD 285
G + AF + M + V +ACS + DV + + ++ G
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIM-CTIQKSGLL 240
Query: 286 LGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM 345
+ VG+ LV +AK G +S A VF M RN V N ++ GL G+ +F M
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 346 VEEVKPDAVTFMALLSACSHSGLVEQ 371
+ +++ LLS+ L E+
Sbjct: 301 NSMIDVSPESYVILLSSFPEYSLAEE 326
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/585 (35%), Positives = 304/585 (51%), Gaps = 52/585 (8%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPLESLQLFIEMRQ 112
P +FL N ++++Y L + A +LFD++PQ ++ + +T +I + Q +E+
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ--RNVISWTTMISAYSKCKIHQKALELLV 151
Query: 113 LGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDL-YVKFGLLG 171
L L NV P V++ + R CN + D+ + G++
Sbjct: 152 LMLR------------------DNVRPNVYT------YSSVLRSCNGMSDVRMLHCGIIK 187
Query: 172 EARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGF 231
E + V + ++D K E VFD M + + W +I G+ N
Sbjct: 188 EGLE-------SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240
Query: 232 TKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVG 291
+ A L K M GF TL SVL AC+ + +G H VK +D +++
Sbjct: 241 SDVALELFKRMKRA-GFIAEQATLTSVLRACTGLALLELGMQAHVHIVK---YDQDLILN 296
Query: 292 TSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VK 350
+LVDMY KCG + AL VF M R+V+ W+ ++ GLA +G + + +F M K
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 351 PDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAEL 410
P+ +T + +L ACSH+GL+E G YFR ++ +Y I P EHY CM+DLLG+AG L++A
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 411 LVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGK 470
L+ +M P+ V +LLG+C + LAE ++++ +DP + + LLSN+YA S K
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 471 VEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRL 530
+ R ++ RGI+K PG S I V+ Q+H F GD SHP+ E+ KL+ +I RL
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 531 AGYVPNTT--CQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFK 588
GYVP T Q L G E++E L HSEKLAL FGL++ + I K
Sbjct: 537 IGYVPETNFVLQDLEG-----------EQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRK 585
Query: 589 NLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
NLRIC DCH K+AS + R IV+RD R+H F+ G CSC DYW
Sbjct: 586 NLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/603 (33%), Positives = 317/603 (52%), Gaps = 52/603 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ LH + V+GL N + NA++ +Y S +R++ ++P+ +D V + ALI
Sbjct: 381 GRILHGLVVVSGLFY--NQIIGNALVSMYGKIGEMSESRRVLLQMPR--RDVVAWNALIG 436
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDP-NVGPQVHSGVVKFGFG 151
P ++L F MR G+S + GD G +H+ +V GF
Sbjct: 437 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 496
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
V N+++ +Y K G L S + +F+G+
Sbjct: 497 SDEHVKNSLITMYAKCGDL-------------------------------SSSQDLFNGL 525
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
RN + W M+ +G +E L+ +M G L+ + LSA ++ + G
Sbjct: 526 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEG 584
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+ +HG AVK +G++ + + DMY+KCG I + + R++ +WN ++ L
Sbjct: 585 QQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 643
Query: 332 HGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
HG + V F M+E +KP VTF++LL+ACSH GLV++G Y+ + + + P IE
Sbjct: 644 HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIE 703
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
H C++DLLGR+G L EAE + KMP++PN++V SLL SC HG L K L ++
Sbjct: 704 HCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKL 763
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
+P + ++L SNM+A +G+ E + R+ + + I+K S + + ++ F GD++
Sbjct: 764 EPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRT 823
Query: 511 HPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLA 570
HP+T EIY KL+D+ ++ +GYV +T+ Q L D E E+ E L+ HSE+LA
Sbjct: 824 HPQTMEIYAKLEDIKKLIKESGYVADTS-QAL------QDTDE--EQKEHNLWNHSERLA 874
Query: 571 LCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCS 630
L + L+ST GS + IFKNLRIC DCHS K S + R IV+RD+YRFH F++G CSC
Sbjct: 875 LAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCK 934
Query: 631 DYW 633
DYW
Sbjct: 935 DYW 937
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 179/398 (44%), Gaps = 44/398 (11%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G Q+H +GLLS ++++ AILH+Y L S +RK+F+E+P ++ V +T+L+
Sbjct: 78 GVQVHGFVAKSGLLS--DVYVSTAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMV 133
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ P E + ++ MR G+ + L D ++G Q+ VVK G
Sbjct: 134 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 193
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N+++ + G V+ +FD M
Sbjct: 194 KLAVENSLISMLGSMG-------------------------------NVDYANYIFDQMS 222
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
ER+ ++W + Y NG +E+F + ++ E+N T+ ++LS GR
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFS-LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HG VK MG+D V V +L+ MYA GR A +VFK M +++++WN+++
Sbjct: 282 GIHGLVVK-MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 340
Query: 333 GMGKAVVDMFPHMVEEVKP-DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G + + M+ K + VTF + L+AC E+GR L V +
Sbjct: 341 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQII 399
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLG 429
+V + G+ G + E+ ++ +MP R + V +L+G
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 436
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 158/373 (42%), Gaps = 51/373 (13%)
Query: 74 ARKLFDEIPQSHKDSVD--YTALIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXR 131
AR LFD +P ++ S + + ++R LE ++ F +M LG+ R
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 132 LGDP-NVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTV 190
G G QVH V K G V A++ LY +GL+ +RKVF E+ +VVSWT
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT- 129
Query: 191 VLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFEL 250
++VGY G +E + K M G G
Sbjct: 130 ------------------------------SLMVGYSDKGEPEEVIDIYKGMR-GEGVGC 158
Query: 251 NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVV 310
N ++ V+S+C D +GR + G VK+ G + + V SL+ M G + A +
Sbjct: 159 NENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYI 217
Query: 311 FKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV---EEVKPDAVTFMALLSACSHSG 367
F MS R+ ++WN++ A +G + +F M +EV ++ T LLS H
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV--NSTTVSTLLSVLGHVD 275
Query: 368 LVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGR----AGHLEEAELLVKKMPIRPNEVV 423
+ GR + ++ + C+ + L R AG EA L+ K+MP + + +
Sbjct: 276 HQKWGRGIHGLV-----VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLIS 329
Query: 424 LGSLLGSCYAHGK 436
SL+ S G+
Sbjct: 330 WNSLMASFVNDGR 342
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 121/229 (52%), Gaps = 13/229 (5%)
Query: 196 VKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTL 255
K+ V+ R +FD MP RNEV+W M+ G V G E ++M G + + +
Sbjct: 3 TKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKPSSFVI 61
Query: 256 CSVLSACSQSGDVC-VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNM 314
S+++AC +SG + G VHGF K+ G V V T+++ +Y G +S + VF+ M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKS-GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 315 SRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQ-- 371
RNVV+W +++ G + G + V+D++ M E V + + ++S+C GL++
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDES 177
Query: 372 -GRQYF-RDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
GRQ + ++S E + +E+ ++ +LG G+++ A + +M R
Sbjct: 178 LGRQIIGQVVKSGLESKLAVEN--SLISMLGSMGNVDYANYIFDQMSER 224
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/605 (33%), Positives = 313/605 (51%), Gaps = 57/605 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTAL-- 94
GKQ H GL+S F+RN ++++Y+ C+ A ++ D++P SV +AL
Sbjct: 155 GKQFHGCFLKYGLISHE--FVRNTLVYMYSLCSGNGEAIRVLDDLPYCDL-SVFSSALSG 211
Query: 95 IRRCPPL-ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
C E L + + + L D N+ QVHS +V+FGF
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAE 271
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
C A++++Y K G + A++VF + ++ T ++D + + E +F M
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT 331
Query: 214 R----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC 269
+ NE + ++ LN + S+L + GD+
Sbjct: 332 KEVPPNEYTFAIL---------------------------LNSIAELSLL----KQGDL- 359
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
+HG +K+ G+ VMVG +LV+MYAK G I A F M+ R++V WN ++ G
Sbjct: 360 ----LHGLVLKS-GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414
Query: 330 AMHGMGKAVVDMFPHMVEEVK-PDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
+ HG+G+ ++ F M+ + P+ +TF+ +L ACSH G VEQG YF L ++++P+
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
I+HY C+V LL +AG ++AE ++ PI + V +LL +CY +L +K+ +
Sbjct: 475 IQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAI 534
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
E P ++ ++LLSN++A S + E R ++ RG++K PG+S I + Q H F A D
Sbjct: 535 EKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAED 594
Query: 509 KSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEK 568
HP + IY K+ +++ +++ GY P+ + D E E+ E L HSEK
Sbjct: 595 NQHPEITLIYAKVKEVMSKIKPLGYSPDVA-------GAFHDVDE--EQREDNLSYHSEK 645
Query: 569 LALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCS 628
LA+ +GLI T SPLY+ KN+RIC DCHSAIK+ S I KR IV+RD RFH F G CS
Sbjct: 646 LAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCS 705
Query: 629 CSDYW 633
C DYW
Sbjct: 706 CCDYW 710
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 158/419 (37%), Gaps = 84/419 (20%)
Query: 196 VKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTL 255
VK R +FD MPERN V+W M+ GY +GF E L K M F N
Sbjct: 80 VKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVA 139
Query: 256 CSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
V +CS SG + G+ HG +K G V +LV MY+ C A+ V ++
Sbjct: 140 TVVFKSCSNSGRIEEGKQFHGCFLK-YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP 198
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQ 374
++ +++ L G G K +D+ E+ + +T+++ L S+
Sbjct: 199 YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSN--------- 249
Query: 375 YFRDLESVYEI---------RPEIEHYACMVDLLGRAGH--------------------- 404
RDL ++ E+E ++++ G+ G
Sbjct: 250 -LRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTT 308
Query: 405 ----------LEEAELLVKKMPIR---PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
EEA L KM + PNE LL S +L L ++ +L+
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSI---AELSLLKQ--GDLLHGL 363
Query: 452 PLNTEY--HIL----LSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFS 505
L + Y H++ L NMYA SG +E A R+ R + +++
Sbjct: 364 VLKSGYRNHVMVGNALVNMYAKSGSIEDA---RKAFSGMTFRDIVTWNTMI--------- 411
Query: 506 AGDKSHPRTSEIYLKLDDMICRLRLAGYVPN--TTCQVLFGCSSSGDCTEALEEVEQVL 562
+G H E D MI G +PN T VL CS G + L Q++
Sbjct: 412 SGCSHHGLGREALEAFDRMI----FTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLM 466
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 255 LCSVLSACSQSGDVCVGRWVHGFAV---KAMGWDLGVMVGTSLVDMYAKCGRISIALVVF 311
L +L C+ S + +G +H + ++ + + SL+++Y KC A +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQI-NSLINLYVKCRETVRARKLF 92
Query: 312 KNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV--EEVKPDAVTFMALLSACSHSGLV 369
M RNVV+W A++ G G V+ +F M E +P+ + +CS+SG +
Sbjct: 93 DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 370 EQGRQY 375
E+G+Q+
Sbjct: 153 EEGKQF 158
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 269/464 (57%), Gaps = 15/464 (3%)
Query: 175 KVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
K+F + + + T ++D E VFD +P+R+ V+W V+ Y+ N T++
Sbjct: 138 KIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRD 197
Query: 235 AFWLLKEM---VFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVG 291
L +M V GC + + VT L AC+ G + G+ VH F + G + +
Sbjct: 198 VLVLFDKMKNDVDGC-VKPDGVTCLLALQACANLGALDFGKQVHDF-IDENGLSGALNLS 255
Query: 292 TSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVK 350
+LV MY++CG + A VF M RNVV+W A++ GLAM+G GK ++ F M++ +
Sbjct: 256 NTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGIS 315
Query: 351 PDAVTFMALLSACSHSGLVEQGRQYFRDLES-VYEIRPEIEHYACMVDLLGRAGHLEEAE 409
P+ T LLSACSHSGLV +G +F + S ++I+P + HY C+VDLLGRA L++A
Sbjct: 316 PEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAY 375
Query: 410 LLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSG 469
L+K M ++P+ + +LLG+C HG ++L E+++ L+E+ ++LL N Y+ G
Sbjct: 376 SLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVG 435
Query: 470 KVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLR 529
K EK R ++K++ I PG S+I + G +H+F D SHPR EIY L ++ +L+
Sbjct: 436 KWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLK 495
Query: 530 LAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKN 589
+AGYV T ++ E+ EE L HSEKLA+ FG++ T G+ + + KN
Sbjct: 496 IAGYVAEITSEL--------HNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKN 547
Query: 590 LRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
LR C DCH+ K S++Y R ++VRDR RFH FK GSCSC+D+W
Sbjct: 548 LRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 146/353 (41%), Gaps = 63/353 (17%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTAL-- 94
G Q+H G LS L ++ +Y+ C + A K+FDEIP+ +D+V + L
Sbjct: 132 GLQIHGKIFSDGFLSDS--LLMTTLMDLYSTCENSTDACKVFDEIPK--RDTVSWNVLFS 187
Query: 95 --IRRCPPLESLQLFIEMRQL---GLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG 149
+R + L LF +M+ + D LG + G QVH + + G
Sbjct: 188 CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG 247
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFD 209
+ N ++ +Y + G + +A +VF + +VVSWT ++ G+
Sbjct: 248 LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAM------------ 295
Query: 210 GMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMV-FGCGFELNCVTLCSVLSACSQSGDV 268
NGF KEA EM+ FG E TL +LSACS SG V
Sbjct: 296 -------------------NGFGKEAIEAFNEMLKFGISPEEQ--TLTGLLSACSHSGLV 334
Query: 269 CVG-----RWVHG-FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR-NVVA 321
G R G F +K G +VD+ + + A + K+M + +
Sbjct: 335 AEGMMFFDRMRSGEFKIKPNLHHYGC-----VVDLLGRARLLDKAYSLIKSMEMKPDSTI 389
Query: 322 WNAVLGGLAMHG---MGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQ 371
W +LG +HG +G+ V+ H++E +A ++ LL+ S G E+
Sbjct: 390 WRTLLGACRVHGDVELGERVI---SHLIELKAEEAGDYVLLLNTYSTVGKWEK 439
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 234 EAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTS 293
E F L + + N ++ L C +SGD+ G +HG + + G+ ++ T+
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHG-KIFSDGFLSDSLLMTT 153
Query: 294 LVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE----V 349
L+D+Y+ C + A VF + +R+ V+WN + + + V+ +F M + V
Sbjct: 154 LMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCV 213
Query: 350 KPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
KPD VT + L AC++ G ++ G+Q D + + +V + R G +++A
Sbjct: 214 KPDGVTCLLALQACANLGALDFGKQ-VHDFIDENGLSGALNLSNTLVSMYSRCGSMDKA 271
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 286/498 (57%), Gaps = 18/498 (3%)
Query: 140 QVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKV---FGEIEVPSVVSWTVVLDGVV 196
Q H+ + K G+G + + + Y + AR++ F + P V + ++++ ++
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLS-PGVCNINLIIESLM 109
Query: 197 KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
K + V ++N + W +MI GYV N +EA LK M+ + N +
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 257 SVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR 316
S L+AC++ GD+ +WVH + + G +L ++ ++LVD+YAKCG I + VF ++ R
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDS-GIELNAILSSALVDVYAKCGDIGTSREVFYSVKR 228
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQY 375
+V WNA++ G A HG+ + +F M E V PD++TF+ LL+ CSH GL+E+G++Y
Sbjct: 229 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEY 288
Query: 376 FRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHG 435
F + + I+P++EHY MVDLLGRAG ++EA L++ MPI P+ V+ SLL S +
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYK 348
Query: 436 KLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
+L E ++ L + + ++LLSN+Y+ + K E A R ++ K GIRK G S +
Sbjct: 349 NPELGEIAIQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWL 405
Query: 496 YVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEAL 555
G +H+F AGD SH T IY L+ +I + + G+V +T ++ D +E
Sbjct: 406 EFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLM-------DVSE-- 456
Query: 556 EEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRD 615
EE E+ L HSEKLAL + ++ +S G+ + I KN+R+C DCH+ IK S + R I++RD
Sbjct: 457 EEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRD 516
Query: 616 RYRFHSFKQGSCSCSDYW 633
R RFH F+ G CSC DYW
Sbjct: 517 RIRFHRFEDGLCSCRDYW 534
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 202/581 (34%), Positives = 310/581 (53%), Gaps = 52/581 (8%)
Query: 59 NAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMRQLG 114
N+++H Y A KLF ++P K+ + +T +I + E+L LF M +
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPG--KNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 115 LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEAR 174
+ ++G QVH ++K GF V +++ Y +G++R
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 175 KVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
KVF E V WT +L G + E +F GM RN +
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGML-RNSIL---------------- 323
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
N T S L++CS G + G+ +HG AVK +G + VG SL
Sbjct: 324 ---------------PNQSTFASGLNSCSALGTLDWGKEMHGVAVK-LGLETDAFVGNSL 367
Query: 295 VDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVK-PDA 353
V MY+ G ++ A+ VF + ++++V+WN+++ G A HG GK +F M+ K PD
Sbjct: 368 VVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDE 427
Query: 354 VTFMALLSACSHSGLVEQGRQYFRDLES-VYEIRPEIEHYACMVDLLGRAGHLEEAELLV 412
+TF LLSACSH G +E+GR+ F + S + I +I+HY CMVD+LGR G L+EAE L+
Sbjct: 428 ITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELI 487
Query: 413 KKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVE 472
++M ++PNE+V +LL +C H + EK + +D ++ ++LLSN+YA +G+
Sbjct: 488 ERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWS 547
Query: 473 KANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAG 532
+ R +KK GI K PG S + + G+ H+F +GD+ P S IY KL+ + +L+ G
Sbjct: 548 NVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLREKLKELG 605
Query: 533 YVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRI 592
Y P+ S+ D + E+ E++L+ HSE+LA+ FGLI+T GS + + KNLR+
Sbjct: 606 YAPDYR-------SALHDVED--EQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRV 656
Query: 593 CQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
C+DCH+ IK+ S + REIV+RD RFH FK G+CSC DYW
Sbjct: 657 CEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 155/340 (45%), Gaps = 40/340 (11%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
N+++ V+ G + A K+F E+ SVVSWT +++G + V+ +F MP ++
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEM---------VFGCGFELN----------------C 252
AW M+ GY+ G +A L K+M CG + N C
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 253 VTLCS-----VLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
+ S V++AC+ + +G VHG +K +G+ V SL+ YA C RI +
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIK-LGFLYEEYVSASLITFYANCKRIGDS 279
Query: 308 LVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHS 366
VF V W A+L G +++ + + +F M+ + P+ TF + L++CS
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 367 GLVEQGRQYFRDLESVYEIRPEIEHYA--CMVDLLGRAGHLEEAELLVKKMPIRPNEVVL 424
G ++ G++ ++ E + + +V + +G++ +A + K+ + + V
Sbjct: 340 GTLDWGKEMH---GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSW 395
Query: 425 GSLLGSCYAHGKLQLAEKIVRELVEMD--PLNTEYHILLS 462
S++ C HG+ + A I +++ ++ P + LLS
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 152/353 (43%), Gaps = 52/353 (14%)
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ EAR+VF ++ P V +T ++ G + + +FD MP R+ V+W MI G V
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDV-CVGRWVHGFAVK-AMGWDLG 287
G A L EM E + V+ ++++ C +SG V R + VK W+
Sbjct: 111 GDMNTAVKLFDEMP-----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN-- 163
Query: 288 VMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE 347
S+V Y + G++ AL +FK M +NV++W ++ GL + +D+F +M+
Sbjct: 164 -----SMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLR 218
Query: 348 -EVKPDAVTFMALLSACSHSGLVEQGRQY----------------------------FRD 378
+K + F +++AC+++ G Q D
Sbjct: 219 CCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGD 278
Query: 379 LESVYE--IRPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYA 433
V++ + ++ + ++ E+A + M I PN+ S L SC A
Sbjct: 279 SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSA 338
Query: 434 HGKLQLAEKIVRELVEMDPLNTEYHI--LLSNMYALSGKVEKANS-FRRVLKK 483
G L +++ V++ L T+ + L MY+ SG V A S F ++ KK
Sbjct: 339 LGTLDWGKEMHGVAVKLG-LETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKK 390
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 208/608 (34%), Positives = 310/608 (50%), Gaps = 56/608 (9%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLF---DEIPQSHKDSVDYTAL 94
KQLH + G S ++ NA + Y+ L A +F DE+ +D V + ++
Sbjct: 158 KQLHCFSVSGGFDSYSSV--NNAFVTYYSKGGLLREAVSVFYGMDEL----RDEVSWNSM 211
Query: 95 I----RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
I + ++L L+ EM G ID L G Q H ++K GF
Sbjct: 212 IVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271
Query: 151 GKCTRVCNAVMDLYVKFGL---LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVV 207
+ + V + ++D Y K G + ++ KVF EI P +V
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV--------------------- 310
Query: 208 FDGMPERNEVAWTVMIVGYVGNG-FTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
W MI GY N ++EA ++M +C +C V SACS
Sbjct: 311 ----------VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC-VTSACSNLS 359
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVL 326
+ +HG A+K+ + V +L+ +Y K G + A VF M N V++N ++
Sbjct: 360 SPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMI 419
Query: 327 GGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI 385
G A HG G + ++ M++ + P+ +TF+A+LSAC+H G V++G++YF ++ ++I
Sbjct: 420 KGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKI 479
Query: 386 RPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVR 445
PE EHY+CM+DLLGRAG LEEAE + MP +P V +LLG+C H + LAE+
Sbjct: 480 EPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAN 539
Query: 446 ELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFS 505
EL+ M PL +++L+NMYA + K E+ S R+ ++ + IRK PG S I V + H F
Sbjct: 540 ELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFV 599
Query: 506 AGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAH 565
A D SHP E+ L++M+ +++ GYV + ++ + + E L H
Sbjct: 600 AEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMV------KEDEAGEGDEEMRLGHH 653
Query: 566 SEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQG 625
SEKLA+ FGL+ST G L + KNLRIC DCH+AIK S + REI+VRD RFH FK G
Sbjct: 654 SEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDG 713
Query: 626 SCSCSDYW 633
CSC DYW
Sbjct: 714 KCSCGDYW 721
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 214/472 (45%), Gaps = 85/472 (18%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCP----PLESLQLFI 108
PN+F N I+ YA + AR+LFDEIPQ D+V Y LI ++ LF
Sbjct: 72 PNVFSYNVIVKAYAKDSKIHIARQLFDEIPQP--DTVSYNTLISGYADARETFAAMVLFK 129
Query: 109 EMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFG 168
MR+LG +D D + Q+H V GF + V NA + Y K G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 169 LLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE-RNEVAWTVMIVGYV 227
LL EA VS VF GM E R+EV+W MIV Y
Sbjct: 188 LLREA------------VS-------------------VFYGMDELRDEVSWNSMIVAYG 216
Query: 228 GNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLG 287
+ +A L KEM+F GF+++ TL SVL+A + + GR HG +KA G+
Sbjct: 217 QHKEGAKALALYKEMIFK-GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA-GFHQN 274
Query: 288 VMVGTSLVDMYAKCG---RISIALVVFKNMSRRNVVAWNAVLGGLAMH-GMGKAVVDMFP 343
VG+ L+D Y+KCG + + VF+ + ++V WN ++ G +M+ + + V F
Sbjct: 275 SHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFR 334
Query: 344 HMVE-EVKPDAVTFMALLSACSHSGLVEQGRQ------------------------YFR- 377
M +PD +F+ + SACS+ Q +Q Y++
Sbjct: 335 QMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKS 394
Query: 378 ----DLESVYEIRPEIE--HYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLL 428
D V++ PE+ + CM+ + GH EA LL ++M I PN++ ++L
Sbjct: 395 GNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVL 454
Query: 429 GSCYAHGKLQLAEK---IVRELVEMDPLNTEYHILLSNMYALSGKVEKANSF 477
+C GK+ ++ ++E +++P E++ + ++ +GK+E+A F
Sbjct: 455 SACAHCGKVDEGQEYFNTMKETFKIEP-EAEHYSCMIDLLGRAGKLEEAERF 505
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 6/244 (2%)
Query: 134 DPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLD 193
D G +H+ VK T + N ++LY K G L AR F E P+V S+ V++
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 194 GVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCV 253
K + R +FD +P+ + V++ +I GY T A L K M GFE++
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR-KLGFEVDGF 141
Query: 254 TLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKN 313
TL +++AC D+ + +H F+V G+D V + V Y+K G + A+ VF
Sbjct: 142 TLSGLIAACCDRVDLI--KQLHCFSVSG-GFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 314 MSR-RNVVAWNAVLGGLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQ 371
M R+ V+WN+++ H G + ++ M+ + K D T ++L+A + +
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 372 GRQY 375
GRQ+
Sbjct: 259 GRQF 262
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/470 (37%), Positives = 276/470 (58%), Gaps = 9/470 (1%)
Query: 57 LRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQLFIEMRQ 112
+ NA +H++A+C +ARK+FDE P +D V + LI + +++ ++ M
Sbjct: 193 VHNASIHMFASCGDMENARKVFDESPV--RDLVSWNCLINGYKKIGEAEKAIYVYKLMES 250
Query: 113 LGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGE 172
G+ D LGD N G + + V + G + NA+MD++ K G + E
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 173 ARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFT 232
AR++F +E ++VSWT ++ G + ++ R +FD M E++ V W MI G V
Sbjct: 311 ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG 370
Query: 233 KEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGT 292
++A L +EM + + +T+ LSACSQ G + VG W+H + ++ L V +GT
Sbjct: 371 QDALALFQEMQTS-NTKPDEITMIHCLSACSQLGALDVGIWIHRY-IEKYSLSLNVALGT 428
Query: 293 SLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKP 351
SLVDMYAKCG IS AL VF + RN + + A++GGLA+HG + F M++ + P
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAP 488
Query: 352 DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELL 411
D +TF+ LLSAC H G+++ GR YF ++S + + P+++HY+ MVDLLGRAG LEEA+ L
Sbjct: 489 DEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL 548
Query: 412 VKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKV 471
++ MP+ + V G+LL C HG ++L EK ++L+E+DP ++ ++LL MY +
Sbjct: 549 MESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMW 608
Query: 472 EKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKL 521
E A RR++ +RG+ K+PG SSI V+G + +F DKS P + +IY +L
Sbjct: 609 EDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 175/422 (41%), Gaps = 56/422 (13%)
Query: 41 HAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIP-----QSHKDSVDYTALI 95
++V + G+ +PN+F N + ++ P + L+ ++ +S D Y L
Sbjct: 105 YSVKILKGI-ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLF 163
Query: 96 RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTR 155
+ C L RL ++G + V+K +
Sbjct: 164 KVCADL-----------------------------RLS--SLGHMILGHVLKLRLELVSH 192
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERN 215
V NA + ++ G + ARKVF E V +VSW +++G K E V+ M
Sbjct: 193 VHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEG 252
Query: 216 EVAWTVMIVGYVGN-------GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDV 268
V ++G V + KE + +KE G + + +++ S+ GD+
Sbjct: 253 VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN----GLRMTIPLVNALMDMFSKCGDI 308
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
R + K ++ T+++ YA+CG + ++ +F +M ++VV WNA++GG
Sbjct: 309 HEARRIFDNLEKRT-----IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGG 363
Query: 329 LAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRP 387
G+ + +F M KPD +T + LSACS G ++ G R +E Y +
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSL 422
Query: 388 EIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+ +VD+ + G++ EA + + R N + +++G HG A E+
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFNEM 481
Query: 448 VE 449
++
Sbjct: 482 ID 483
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 12/251 (4%)
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFG--CGFELNCVTLCSVLSACSQ 264
+ G+ N +W V I G+ + KE+F L K+M+ C + T + C+
Sbjct: 109 ILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCAD 168
Query: 265 SGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNA 324
+G + G +K + +L V + + M+A CG + A VF R++V+WN
Sbjct: 169 LRLSSLGHMILGHVLK-LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 325 VLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVY 383
++ G G + + ++ M E VKPD VT + L+S+CS G + +G++++ E V
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY---EYVK 284
Query: 384 E--IRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAH-GKLQLA 440
E +R I ++D+ + G + EA + + R +V + + S YA G L ++
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT--IVSWTTMISGYARCGLLDVS 342
Query: 441 EKIVRELVEMD 451
K+ ++ E D
Sbjct: 343 RKLFDDMEEKD 353
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 308/585 (52%), Gaps = 54/585 (9%)
Query: 57 LRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMRQ 112
+RN ++ VYA C AR +F+ + KD+V + ++I + +E+++LF M
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSM--ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 113 LGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGE 172
+ D RL D G +HS +K G V NA++D+Y K G +G+
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGD 461
Query: 173 ARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFT 232
+ K+F + V+W V+ V++ +G V M + V
Sbjct: 462 SLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVP-------------- 507
Query: 233 KEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGT 292
+ T L C+ +G+ +H ++ G++ + +G
Sbjct: 508 ------------------DMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGN 548
Query: 293 SLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKP 351
+L++MY+KCG + + VF+ MSRR+VV W ++ M+G G+ ++ F M + + P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 352 DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELL 411
D+V F+A++ ACSHSGLV++G F +++ Y+I P IEHYAC+VDLL R+ + +AE
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 412 VKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKV 471
++ MPI+P+ + S+L +C G ++ AE++ R ++E++P + Y IL SN YA K
Sbjct: 669 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728
Query: 472 EKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLA 531
+K + R+ LK + I K PG S I V +H FS+GD S P++ IY L+ + +
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKE 788
Query: 532 GYVPNTTCQVLFGCSSSGDCTEALEEV---EQVLFAHSEKLALCFGLISTSSGSPLYIFK 588
GY+P+ + ++ LEE +++ HSE+LA+ FGL++T G+PL + K
Sbjct: 789 GYIPDPR-----------EVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMK 837
Query: 589 NLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
NLR+C DCH K+ S I REI+VRD RFH FK G+CSC D W
Sbjct: 838 NLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 186/419 (44%), Gaps = 44/419 (10%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRR 97
+++HA+ GL SS F ++ Y+ P+ + +F + + K+ + ++IR
Sbjct: 24 RRIHALVISLGLDSSD--FFSGKLIDKYSHFREPASSLSVFRRVSPA-KNVYLWNSIIRA 80
Query: 98 CPP----LESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
E+L+ + ++R+ +S D L D +G V+ ++ GF
Sbjct: 81 FSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESD 140
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
V NA++D+Y + GLL AR+VF E MP
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDE-------------------------------MPV 169
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
R+ V+W +I GY +G+ +EA + E+ + T+ SVL A V G+
Sbjct: 170 RDLVSWNSLISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
+HGFA+K+ + V+V LV MY K R + A VF M R+ V++N ++ G
Sbjct: 229 LHGFALKSGV-NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 334 MGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQ-YFRDLESVYEIRPEIEHY 392
M + V MF +++ KPD +T ++L AC H + + Y L++ + + + +
Sbjct: 288 MVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN- 346
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
++D+ + G + A + M + + V S++ G L A K+ + ++ M+
Sbjct: 347 -ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 140/365 (38%), Gaps = 80/365 (21%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GK LH+ +G+ +L + NA++ +YA C + K+F + D+V + +I
Sbjct: 427 GKGLHSNGIKSGI--CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG--DTVTWNTVIS 482
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
C LQ+ +MR+ + D L +G ++H +++FG+
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
++ NA++++Y K G L + +VF + M
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVF-------------------------------ERMS 571
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
R+ V WT MI Y G ++A +M G + V +++ ACS SG V G
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALETFADME-KSGIVPDSVVFIAIIYACSHSGLVDEG- 629
Query: 273 WVHGFAVKAMGWDLGVMVG--TSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
+ F + + M+ +VD+ ++ +IS A + M
Sbjct: 630 -LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP--------------- 673
Query: 331 MHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+KPDA + ++L AC SG +E + R + E+ P+
Sbjct: 674 ------------------IKPDASIWASVLRACRTSGDMETAERVSR---RIIELNPDDP 712
Query: 391 HYACM 395
Y+ +
Sbjct: 713 GYSIL 717
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS-RRNV 319
A S S ++ R +H + ++G D L+D Y+ + +L VF+ +S +NV
Sbjct: 13 ALSSSSNLNELRRIHALVI-SLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
WN+++ + +G+ ++ + + E +V PD TF +++ AC+ E G +
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY-- 129
Query: 379 LESVYEIRPEIEHYA--CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGK 436
E + ++ E + + +VD+ R G L A + +MP+R + V SL+ +HG
Sbjct: 130 -EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHGY 187
Query: 437 LQLAEKIVREL 447
+ A +I EL
Sbjct: 188 YEEALEIYHEL 198
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/597 (32%), Positives = 310/597 (51%), Gaps = 48/597 (8%)
Query: 42 AVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVD--YTALIRRCP 99
+ V G + N N +++ Y +ARK+FDE+P + + LI+
Sbjct: 12 SAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 71
Query: 100 PLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNA 159
E L LF EM LG S D L ++G Q+H +K+G V ++
Sbjct: 72 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 131
Query: 160 VMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAW 219
+ +Y++ G L + GEI + S MP RN VAW
Sbjct: 132 LAHMYMRNGKLQD-----GEIVIRS--------------------------MPVRNLVAW 160
Query: 220 TVMIVGYVGNGFTKEAFWLLKEM-VFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFA 278
+I+G NG + +L K M + GC N +T +VLS+CS G+ +H A
Sbjct: 161 NTLIMGNAQNGCPETVLYLYKMMKISGC--RPNKITFVTVLSSCSDLAIRGQGQQIHAEA 218
Query: 279 VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAV 338
+K +G V V +SL+ MY+KCG + A F + V W++++ HG G
Sbjct: 219 IK-IGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 277
Query: 339 VDMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMV 396
+++F M E+ ++ + V F+ LL ACSHSGL ++G + F + Y +P ++HY C+V
Sbjct: 278 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 337
Query: 397 DLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTE 456
DLLGRAG L++AE +++ MPI+ + V+ +LL +C H ++A+++ +E++++DP ++
Sbjct: 338 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSA 397
Query: 457 YHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSE 516
++LL+N++A + + + R+ ++ + ++K G+S G++HQF GD+S ++ E
Sbjct: 398 CYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKE 457
Query: 517 IYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLI 576
IY L ++ ++L GY P+T S D E EE E L HSEKLA+ F L+
Sbjct: 458 IYSYLKELTLEMKLKGYKPDTA-------SVLHDMDE--EEKESDLVQHSEKLAVAFALM 508
Query: 577 STSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
G+P+ I KNLR+C DCH A K S I REI +RD RFH F G CSC DYW
Sbjct: 509 ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 120/215 (55%), Gaps = 3/215 (1%)
Query: 161 MDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWT 220
M +Y K G A V+G + + +S ++++G V+ + + R VFD MP+R W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 221 VMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVK 280
MI G + F +E L +EM G GF + TL SV S + V +G+ +HG+ +K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREM-HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 281 AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVD 340
G +L ++V +SL MY + G++ +V ++M RN+VAWN ++ G A +G + V+
Sbjct: 120 -YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 341 MFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQ 374
++ M + +P+ +TF+ +LS+CS + QG+Q
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 213
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 202/614 (32%), Positives = 312/614 (50%), Gaps = 72/614 (11%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALP-----SHARKLFDEIPQSHKDSVDYT 92
+++H+ + GL P++F H+ CA+ SHA+ LFD S + D+
Sbjct: 22 RKIHSHVIINGLQHHPSIFN-----HLLRFCAVSVTGSLSHAQLLFDHF-DSDPSTSDWN 75
Query: 93 ALIR----RCPPLESLQLFIEMRQLGLS-IDXXXXXXXXXXXXRLGDPNVGPQVHSGVVK 147
LIR PL S+ + M +S D R+ ++H V++
Sbjct: 76 YLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIR 135
Query: 148 FGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVV 207
GF V +++ Y G VE V
Sbjct: 136 SGFLDDAIVATSLVRCYSANG-------------------------------SVEIASKV 164
Query: 208 FDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNC---VTLCSVLSACSQ 264
FD MP R+ V+W VMI + G +A + K M G E C TL ++LS+C+
Sbjct: 165 FDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM----GNEGVCGDSYTLVALLSSCAH 220
Query: 265 SGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNA 324
+ +G +H A + + V V +L+DMYAKCG + A+ VF M +R+V+ WN+
Sbjct: 221 VSALNMGVMLHRIACD-IRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNS 279
Query: 325 VLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVY 383
++ G +HG G + F MV V+P+A+TF+ LL CSH GLV++G ++F + S +
Sbjct: 280 MIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQF 339
Query: 384 EIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKI 443
+ P ++HY CMVDL GRAG LE + ++ + V+ +LLGSC H L+L E
Sbjct: 340 HLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVA 399
Query: 444 VRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQ 503
+++LV+++ N ++L++++Y+ + + S R++++ ++ VPG S I + Q+H+
Sbjct: 400 MKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHK 459
Query: 504 FSAGDKSHPRTSEIYLKLDDMICRLRLAGYVP---NTTCQVLFG-CSSSGDCTEALEEVE 559
F DK HP ++ IY +L ++I R LAGY P N T L C S D +
Sbjct: 460 FVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTS------- 512
Query: 560 QVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRF 619
HSEKLA+ +GL+ T++G+ L I KNLR+C+DCHS K S + REI+VRDR RF
Sbjct: 513 -----HSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRF 567
Query: 620 HSFKQGSCSCSDYW 633
H F G CSC+DYW
Sbjct: 568 HHFADGICSCNDYW 581
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 199/605 (32%), Positives = 305/605 (50%), Gaps = 63/605 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+Q+HA GL S N + I+++Y C A+++FD++ + K V T L+
Sbjct: 203 GRQIHAHVIRAGLCS--NTSIETGIVNMYVKCGWLVGAKRVFDQM--AVKKPVACTGLMV 258
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ ++L+LF+++ G+ D L + N+G Q+H+ V K G
Sbjct: 259 GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLES 318
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V ++D Y+K A + F EI P
Sbjct: 319 EVSVGTPLVDFYIKCSSFESACRAFQEIREP----------------------------- 349
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
N+V+W+ +I GY +EA K + LN T S+ ACS D +G
Sbjct: 350 --NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 273 WVHGFAVKAMGWDLGVMVGTS-LVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
VH A+K +G G S L+ MY+KCG + A VF++M ++VAW A + G A
Sbjct: 408 QVHADAIKRSL--IGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAY 465
Query: 332 HGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+G + +F MV +KP++VTF+A+L+ACSH+GLVEQG+ + Y + P I+
Sbjct: 466 YGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTID 525
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HY CM+D+ R+G L+EA +K MP P+ + L C+ H L+L E EL ++
Sbjct: 526 HYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQL 585
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
DP +T ++L N+Y +GK E+A +++ +R ++K S I G++H+F GDK
Sbjct: 586 DPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKH 645
Query: 511 HPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLA 570
HP+T EIY KL + G++ +F C+ + E + L HSE+LA
Sbjct: 646 HPQTQEIYEKLKE------FDGFMEGD----MFQCN--------MTERREQLLDHSERLA 687
Query: 571 LCFGLIST--SSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCS 628
+ FGLIS ++ +P+ +FKNLR C DCH K S + EIV+RD RFH FK+G CS
Sbjct: 688 IAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCS 747
Query: 629 CSDYW 633
C+DYW
Sbjct: 748 CNDYW 752
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 198/475 (41%), Gaps = 84/475 (17%)
Query: 50 LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQ 105
+ +P++ L+N +L +Y C A KLFDE+ S ++V T +I +++
Sbjct: 113 IENPSVLLQNCVLQMYCECRSLEDADKLFDEM--SELNAVSRTTMISAYAEQGILDKAVG 170
Query: 106 LFIEMRQLGLSIDXXXXXXXXXXXXRLGDP---NVGPQVHSGVVKFGFGKCTRVCNAVMD 162
LF M G D L +P + G Q+H+ V++ G T + +++
Sbjct: 171 LFSGMLASG---DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVN 227
Query: 163 LYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVM 222
+YVK G L A++V FD M + VA T +
Sbjct: 228 MYVKCGWLVGAKRV-------------------------------FDQMAVKKPVACTGL 256
Query: 223 IVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAM 282
+VGY G ++A L ++V G E + VL AC+ ++ +G+ +H V +
Sbjct: 257 MVGYTQAGRARDALKLFVDLVTE-GVEWDSFVFSVVLKACASLEELNLGKQIHA-CVAKL 314
Query: 283 GWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMF 342
G + V VGT LVD Y KC A F+ + N V+W+A++ G + V F
Sbjct: 315 GLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTF 374
Query: 343 PHMVEEVKP--DAVTFMALLSACS-----------HSGLVEQ---GRQY----------- 375
+ + ++ T+ ++ ACS H+ +++ G QY
Sbjct: 375 KSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSK 434
Query: 376 ---FRDLESVYEI--RPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSL 427
D V+E P+I + + G+ EA L +KM ++PN V ++
Sbjct: 435 CGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAV 494
Query: 428 LGSCYAHGKLQLAEKIVRELV---EMDPLNTEYHILLSNMYALSGKVEKANSFRR 479
L +C G ++ + + ++ + P Y ++ ++YA SG +++A F +
Sbjct: 495 LTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMI-DIYARSGLLDEALKFMK 548
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 308/586 (52%), Gaps = 50/586 (8%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIE 109
N + NA + YA C S+A+++F I +S + ALI + P SL ++
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS--WNALIGGHAQSNDPRLSLDAHLQ 486
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
M+ GL D +L +G +VH +++ + V +V+ LY+ G
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
L + +F +E S+VSW V I GY+ N
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTV-------------------------------ITGYLQN 575
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVM 289
GF A + ++MV G +L +++ V ACS + +GR H +A+K + D
Sbjct: 576 GFPDRALGVFRQMVL-YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLED-DAF 633
Query: 290 VGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE- 348
+ SL+DMYAK G I+ + VF + ++ +WNA++ G +HG+ K + +F M
Sbjct: 634 IACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTG 693
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
PD +TF+ +L+AC+HSGL+ +G +Y ++S + ++P ++HYAC++D+LGRAG L++A
Sbjct: 694 HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKA 753
Query: 409 -ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYAL 467
++ ++M + + SLL SC H L++ EK+ +L E++P E ++LLSN+YA
Sbjct: 754 LRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAG 813
Query: 468 SGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICR 527
GK E R+ + + +RK G S I ++ ++ F G++ EI + +
Sbjct: 814 LGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMK 873
Query: 528 LRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIF 587
+ GY P+T S D +E E++EQ L HSEKLAL +GLI TS G+ + ++
Sbjct: 874 ISKMGYRPDTM-------SVQHDLSEE-EKIEQ-LRGHSEKLALTYGLIKTSEGTTIRVY 924
Query: 588 KNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
KNLRIC DCH+A K+ S + +REIVVRD RFH FK G CSC DYW
Sbjct: 925 KNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 166/344 (48%), Gaps = 46/344 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+++H + + + L + ++ L I+ +YA C P +R +FD + K+ + A+I
Sbjct: 103 GRKIHQLVSGSTRLRNDDV-LCTRIITMYAMCGSPDDSRFVFDALRS--KNLFQWNAVIS 159
Query: 96 ---RRCPPLESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
R E L+ FIEM L D + D +G VH VVK G
Sbjct: 160 SYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLV 219
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ V NA++ Y G + +A ++F D M
Sbjct: 220 EDVFVGNALVSFYGTHGFVTDALQLF-------------------------------DIM 248
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCG---FELNCVTLCSVLSACSQSGDV 268
PERN V+W MI + NGF++E+F LL EM+ G F + TL +VL C++ ++
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
+G+ VHG+AVK + D +++ +L+DMY+KCG I+ A ++FK + +NVV+WN ++GG
Sbjct: 309 GLGKGVHGWAVK-LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 329 LAMHGMGKAVVDMFPHMV---EEVKPDAVTFMALLSACSHSGLV 369
+ G D+ M+ E+VK D VT + + C H +
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 149/348 (42%), Gaps = 46/348 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G +H + TGL+ ++F+ NA++ Y + A +LFD +P+ ++ V + ++IR
Sbjct: 206 GLAVHGLVVKTGLVE--DVFVGNALVSFYGTHGFVTDALQLFDIMPE--RNLVSWNSMIR 261
Query: 97 RCP----PLESLQLFIEMRQL----GLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKF 148
ES L EM + D R + +G VH VK
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 149 GFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVF 208
K + NA+MD+Y K G + A+ ++F
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQ-------------------------------MIF 350
Query: 209 DGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGC-GFELNCVTLCSVLSACSQSGD 267
+N V+W M+ G+ G T F +L++M+ G + + VT+ + + C
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 268 VCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLG 327
+ + +H +++K + +V + V YAKCG +S A VF + + V +WNA++G
Sbjct: 411 LPSLKELHCYSLK-QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 328 GLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQ 374
G A + +D M + + PD+ T +LLSACS + G++
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 159/379 (41%), Gaps = 42/379 (11%)
Query: 202 ESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSA 261
+ R VFD + +N W +I Y N E EM+ + T V+ A
Sbjct: 137 DDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKA 196
Query: 262 CSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA 321
C+ DV +G VHG VK G V VG +LV Y G ++ AL +F M RN+V+
Sbjct: 197 CAGMSDVGIGLAVHGLVVKT-GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVS 255
Query: 322 WNAVLGGLAMHGMGKAVVDMFPHMVEE-----VKPDAVTFMALLSACSHSGLVEQGRQYF 376
WN+++ + +G + + M+EE PD T + +L C+ + G+
Sbjct: 256 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG-V 314
Query: 377 RDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGK 436
+ E+ ++D+ + G + A+++ KM N V +++G A G
Sbjct: 315 HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGD 373
Query: 437 LQLAEKIVRELV---------EMDPLNT-------EYHILLSNMYALSGKVE------KA 474
++R+++ E+ LN + L ++ S K E A
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA 433
Query: 475 NSFRRVLKKRGI-----RKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLR 529
N+F K G R G+ S V+ ++A H ++++ L LD + +++
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVN----SWNALIGGHAQSNDPRLSLDAHL-QMK 488
Query: 530 LAGYVPN--TTCQVLFGCS 546
++G +P+ T C +L CS
Sbjct: 489 ISGLLPDSFTVCSLLSACS 507
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR 317
+L A + D+ +GR +H + ++ T ++ MYA CG + VF + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 318 NVVAWNAVLGGLAMHGMGKAVVDMFPHMVE--EVKPDAVTFMALLSACS----------- 364
N+ WNAV+ + + + V++ F M+ ++ PD T+ ++ AC+
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 365 -----HSGLVEQ------------GRQYFRDLESVYEIRPE--IEHYACMVDLLGRAGHL 405
+GLVE + D +++I PE + + M+ + G
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 406 EEAELLVKKM 415
EE+ LL+ +M
Sbjct: 270 EESFLLLGEM 279
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 309/581 (53%), Gaps = 52/581 (8%)
Query: 60 AILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRR-CPP---LESLQLFIEMRQLGL 115
+L +Y S A K+F+E+P++ D V ++ +I R C E++ LFI MR+
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKN--DVVPWSFMIARFCQNGFCNEAVDLFIRMRE-AF 343
Query: 116 SIDXXXXXXXXXXXXRLGD-PNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEAR 174
+ +G +G Q+H VVK GF V NA++D+Y K + A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 175 KVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
K+F E + +NEV+W +IVGY G +
Sbjct: 404 KLFAE-------------------------------LSSKNEVSWNTVIVGYENLGEGGK 432
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
AF + +E + + VT S L AC+ + +G VHG A+K V V SL
Sbjct: 433 AFSMFREALRN-QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK-KVAVSNSL 490
Query: 295 VDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDA 353
+DMYAKCG I A VF M +V +WNA++ G + HG+G+ + + M + + KP+
Sbjct: 491 IDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNG 550
Query: 354 VTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVK 413
+TF+ +LS CS++GL++QG++ F + + I P +EHY CMV LLGR+G L++A L++
Sbjct: 551 LTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIE 610
Query: 414 KMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEK 473
+P P+ ++ ++L + + A + E+++++P + ++L+SNMYA + +
Sbjct: 611 GIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWAN 670
Query: 474 ANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGY 533
S R+ +K+ G++K PG+S I G +H FS G HP I L+ + + AGY
Sbjct: 671 VASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGY 730
Query: 534 VPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLIST-SSGSPLYIFKNLRI 592
VP+ +L D + EE ++ L+ HSE+LAL +GL+ SS + + I KNLRI
Sbjct: 731 VPDRNAVLL-------DMDD--EEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRI 781
Query: 593 CQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
C DCHSA+K+ S+I +R++V+RD RFH F G CSC D+W
Sbjct: 782 CSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 136/322 (42%), Gaps = 39/322 (12%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPLESLQLFIEMRQL 113
+LF N +L+ Y A LFDE+P+ +++V + L + + + L+ + +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPE--RNNVSFVTLAQGYACQDPIGLYSRLHRE 140
Query: 114 GLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEA 173
G ++ L + P +HS +VK G+ V A+++ Y G + A
Sbjct: 141 GHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSA 200
Query: 174 RKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTK 233
R VF+G+ ++ V W ++ YV NG+ +
Sbjct: 201 R-------------------------------TVFEGILCKDIVVWAGIVSCYVENGYFE 229
Query: 234 EAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTS 293
++ LL M GF N T + L A G + VHG +K + L VG
Sbjct: 230 DSLKLLSCMRMA-GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC-YVLDPRVGVG 287
Query: 294 LVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPD 352
L+ +Y + G +S A VF M + +VV W+ ++ +G VD+F M E V P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 353 AVTFMALLSACSH---SGLVEQ 371
T ++L+ C+ SGL EQ
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQ 369
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 41/295 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+QLH + G ++++ NA++ VYA C A KLF E+ S K+ V + +I
Sbjct: 367 GEQLHGLVVKVGF--DLDIYVSNALIDVYAKCEKMDTAVKLFAEL--SSKNEVSWNTVIV 422
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
L ++ +F E + +S+ L ++G QVH +K K
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N+++D+Y K G + A+ VF E+E V S
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS------------------------- 517
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
W +I GY +G ++A +L +++ + N +T VLS CS +G + G+
Sbjct: 518 ------WNALISGYSTHGLGRQALRIL-DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQ 570
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR-NVVAWNAVL 326
++ G + + T +V + + G++ A+ + + + +V+ W A+L
Sbjct: 571 ECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 12/242 (4%)
Query: 189 TVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGF 248
++L+ VK + +FD MPERN V++ + GY L +E G
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHRE-----GH 142
Query: 249 ELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIAL 308
ELN S L + W+H VK +G+D VG +L++ Y+ CG + A
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVK-LGYDSNAFVGAALINAYSVCGSVDSAR 201
Query: 309 VVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSG 367
VF+ + +++V W ++ +G + + + M + P+ TF L A G
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261
Query: 368 LVEQGRQ-YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGS 426
+ + + + L++ Y + P + ++ L + G + +A + +MP N+VV S
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP--KNDVVPWS 317
Query: 427 LL 428
+
Sbjct: 318 FM 319
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 315 bits (806), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 193/570 (33%), Positives = 298/570 (52%), Gaps = 56/570 (9%)
Query: 74 ARKLFDEIPQSHKDSVDYTALIR---------RCPPLESLQLFIEMRQLGLSIDXXXXXX 124
A KLFDE+P+ +D V + +LI +C + S + E +G +
Sbjct: 85 AEKLFDEMPE--RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISE---VGFRPNEVTFLS 139
Query: 125 XXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPS 184
G G +H V+KFG + +V NA ++ Y K G L + K+F ++ +
Sbjct: 140 MISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSI-- 197
Query: 185 VVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVF 244
+N V+W MIV ++ NG ++ M
Sbjct: 198 -----------------------------KNLVSWNTMIVIHLQNGLAEKGLAYFN-MSR 227
Query: 245 GCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRI 304
G E + T +VL +C G V + + +HG + G+ + T+L+D+Y+K GR+
Sbjct: 228 RVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG-GFSGNKCITTALLDLYSKLGRL 286
Query: 305 SIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSAC 363
+ VF ++ + +AW A+L A HG G+ + F MV + PD VTF LL+AC
Sbjct: 287 EDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNAC 346
Query: 364 SHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVV 423
SHSGLVE+G+ YF + Y I P ++HY+CMVDLLGR+G L++A L+K+MP+ P+ V
Sbjct: 347 SHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGV 406
Query: 424 LGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKK 483
G+LLG+C + QL K L E++P + +++LSN+Y+ SG + A+ R ++K+
Sbjct: 407 WGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQ 466
Query: 484 RGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLF 543
+G+ + G S I ++H+F GD SHP + +I KL ++ +++ + T VL
Sbjct: 467 KGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLH 526
Query: 544 GCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIA 603
D E ++ E+++ HSEK+A+ FGL+ S P+ I KNLRIC DCH K
Sbjct: 527 ------DVGEDVK--EEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAI 578
Query: 604 SNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
S I KR I++RD RFH F GSCSCSDYW
Sbjct: 579 SLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 196/595 (32%), Positives = 311/595 (52%), Gaps = 52/595 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ LH + V+GL N + NA++ +Y S +R++ ++P+ +D V + ALI
Sbjct: 364 GRILHGLVVVSGLFY--NQIIGNALVSMYGKIGEMSESRRVLLQMPR--RDVVAWNALIG 419
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDP-NVGPQVHSGVVKFGFG 151
P ++L F MR G+S + GD G +H+ +V GF
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 479
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
V N+++ +Y K G L S + +F+G+
Sbjct: 480 SDEHVKNSLITMYAKCGDL-------------------------------SSSQDLFNGL 508
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
RN + W M+ +G +E L+ +M G L+ + LSA ++ + G
Sbjct: 509 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEG 567
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+ +HG AVK +G++ + + DMY+KCG I + + R++ +WN ++ L
Sbjct: 568 QQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 626
Query: 332 HGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
HG + V F M+E +KP VTF++LL+ACSH GLV++G Y+ + + + P IE
Sbjct: 627 HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIE 686
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
H C++DLLGR+G L EAE + KMP++PN++V SLL SC HG L K L ++
Sbjct: 687 HCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKL 746
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
+P + ++L SNM+A +G+ E + R+ + + I+K S + + ++ F GD++
Sbjct: 747 EPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRT 806
Query: 511 HPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLA 570
HP+T EIY KL+D+ ++ +GYV +T+ Q L D E E+ E L+ HSE+LA
Sbjct: 807 HPQTMEIYAKLEDIKKLIKESGYVADTS-QAL------QDTDE--EQKEHNLWNHSERLA 857
Query: 571 LCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQG 625
L + L+ST GS + IFKNLRIC DCHS K S + R IV+RD+YRFH F++G
Sbjct: 858 LAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 179/398 (44%), Gaps = 44/398 (11%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G Q+H +GLLS ++++ AILH+Y L S +RK+F+E+P ++ V +T+L+
Sbjct: 61 GVQVHGFVAKSGLLS--DVYVSTAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMV 116
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ P E + ++ MR G+ + L D ++G Q+ VVK G
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N+++ + G V+ +FD M
Sbjct: 177 KLAVENSLISMLGSMG-------------------------------NVDYANYIFDQMS 205
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
ER+ ++W + Y NG +E+F + ++ E+N T+ ++LS GR
Sbjct: 206 ERDTISWNSIAAAYAQNGHIEESFRIFS-LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HG VK MG+D V V +L+ MYA GR A +VFK M +++++WN+++
Sbjct: 265 GIHGLVVK-MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 323
Query: 333 GMGKAVVDMFPHMVEEVKP-DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G + + M+ K + VTF + L+AC E+GR L V +
Sbjct: 324 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQII 382
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLG 429
+V + G+ G + E+ ++ +MP R + V +L+G
Sbjct: 383 GNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 419
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 149/353 (42%), Gaps = 49/353 (13%)
Query: 92 TALIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDP-NVGPQVHSGVVKFGF 150
+ ++R LE ++ F +M LG+ R G G QVH V K G
Sbjct: 14 SGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL 73
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
V A++ LY +GL+ +RKVF E
Sbjct: 74 LSDVYVSTAILHLYGVYGLVSCSRKVFEE------------------------------- 102
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
MP+RN V+WT ++VGY G +E + K M G G N ++ V+S+C D +
Sbjct: 103 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR-GEGVGCNENSMSLVISSCGLLKDESL 161
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
GR + G VK+ G + + V SL+ M G + A +F MS R+ ++WN++ A
Sbjct: 162 GRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 331 MHGMGKAVVDMFPHMV---EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRP 387
+G + +F M +EV ++ T LLS H + GR + ++
Sbjct: 221 QNGHIEESFRIFSLMRRFHDEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLV-----VKM 273
Query: 388 EIEHYACMVDLLGR----AGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGK 436
+ C+ + L R AG EA L+ K+MP + + + SL+ S G+
Sbjct: 274 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDGR 325
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 13/214 (6%)
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC- 269
MP RNEV+W M+ G V G E ++M G + + + S+++AC +SG +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKPSSFVIASLVTACGRSGSMFR 59
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
G VHGF K+ G V V T+++ +Y G +S + VF+ M RNVV+W +++ G
Sbjct: 60 EGVQVHGFVAKS-GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 330 AMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQ---GRQYF-RDLESVYE 384
+ G + V+D++ M E V + + ++S+C GL++ GRQ + ++S E
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLE 175
Query: 385 IRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
+ +E+ ++ +LG G+++ A + +M R
Sbjct: 176 SKLAVEN--SLISMLGSMGNVDYANYIFDQMSER 207
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 280/534 (52%), Gaps = 83/534 (15%)
Query: 168 GLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYV 227
G + EAR +F E+ +VV+WT ++ G + V+ R +F+ MPE+ EV+WT M++GY
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYT 245
Query: 228 GNGFTKEAFWLLKEM----VFGC------------------------------------- 246
+G ++A + M V C
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 247 ----GFELNCV----------------TLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDL 286
GFEL + +L S+LS C+ + GR VH V+ +D
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ-FDD 364
Query: 287 GVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV 346
V V + L+ MY KCG + A +VF S ++++ WN+++ G A HG+G+ + +F M
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Query: 347 EE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHL 405
P+ VT +A+L+ACS++G +E+G + F +ES + + P +EHY+C VD+LGRAG +
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484
Query: 406 EEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMY 465
++A L++ M I+P+ V G+LLG+C H +L LAE ++L E +P N ++LLS++
Sbjct: 485 DKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSIN 544
Query: 466 ALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD-KSHPRTSEIYLKLDDM 524
A K R+ ++ + K PG S I V ++H F+ G K+HP + I + L+
Sbjct: 545 ASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKT 604
Query: 525 ICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQ-----VLFAHSEKLALCFGLISTS 579
LR AGY P DC+ L +V++ L HSE+LA+ +GL+
Sbjct: 605 DGLLREAGYSP--------------DCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLP 650
Query: 580 SGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
G P+ + KNLR+C DCH+AIK+ S + +REI++RD RFH F G CSC DYW
Sbjct: 651 EGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 184/440 (41%), Gaps = 69/440 (15%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
N+++ Y GL EAR++F E+ +VVSW ++ G +K + R VF+ MPERN V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 218 AWTVMIVGYVGNGFTKEA---FWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
+WT M+ GY+ G EA FW + E N V+ + G + R +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPER--------NEVSWTVMFGGLIDDGRIDKARKL 163
Query: 275 HG-FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
+ VK V+ T+++ + GR+ A ++F M RNVV W ++ G +
Sbjct: 164 YDMMPVK------DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNN 217
Query: 334 MGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDL-------------- 379
+F M E+ + V++ ++L + SG +E ++F +
Sbjct: 218 RVDVARKLFEVMPEKTE---VSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Query: 380 ----------ESVYEIRPEIEH--YACMVDLLGRAG-HLEEAELL--VKKMPIRPNEVVL 424
V+++ + ++ + M+ R G LE +L ++K +RP+ L
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 425 GSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEY-HILLSNMYALSGKVEKANSFRRVLKK 483
S+L C LQ ++ LV + Y +L MY G++ KA + V +
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA---KLVFDR 391
Query: 484 RGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPN--TTCQV 541
+ + +SI +G SH E +M +G +PN T +
Sbjct: 392 FSSKDIIMWNSII---------SGYASHGLGEEALKIFHEMPS----SGTMPNKVTLIAI 438
Query: 542 LFGCSSSGDCTEALEEVEQV 561
L CS +G E LE E +
Sbjct: 439 LTACSYAGKLEEGLEIFESM 458
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 26/275 (9%)
Query: 157 CNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNE 216
C+ + + G + EARK F ++ ++ SW ++ G + R +FD M ERN
Sbjct: 20 CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV 79
Query: 217 VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHG 276
V+W ++ GY+ N EA VF E N V+ +++ Q G V +
Sbjct: 80 VSWNGLVSGYIKNRMIVEA-----RNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 277 FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGK 336
+ VM G + D GRI A ++ M ++VVA ++GGL G
Sbjct: 135 RMPERNEVSWTVMFGGLIDD-----GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVD 189
Query: 337 AVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMV 396
+F M E + VT+ +++ + V+ R+ F E+ PE +
Sbjct: 190 EARLIFDEMRER---NVVTWTTMITGYRQNNRVDVARKLF-------EVMPEKTEVSWTS 239
Query: 397 DLLGR--AGHLEEAELLVKKMPIRP----NEVVLG 425
LLG +G +E+AE + MP++P N +++G
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 130/313 (41%), Gaps = 40/313 (12%)
Query: 59 NAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMRQLG 114
NA++ + S AR++FD + +D+ + +I R+ LE+L LF +M++ G
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMED--RDNATWRGMIKAYERKGFELEALDLFAQMQKQG 326
Query: 115 LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEAR 174
+ L G QVH+ +V+ F V + +M +YVK G L +A+
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAK 386
Query: 175 KVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
VF D ++ + W +I GY +G +E
Sbjct: 387 LVF-------------------------------DRFSSKDIIMWNSIISGYASHGLGEE 415
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
A + EM G N VTL ++L+ACS +G + G + V +
Sbjct: 416 ALKIFHEMP-SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCT 474
Query: 295 VDMYAKCGRISIALVVFKNMS-RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDA 353
VDM + G++ A+ + ++M+ + + W A+LG H + ++ + E +PD
Sbjct: 475 VDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR-LDLAEVAAKKLFENEPDN 533
Query: 354 VTFMALLSACSHS 366
LLS+ + S
Sbjct: 534 AGTYVLLSSINAS 546
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 294/512 (57%), Gaps = 12/512 (2%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK+LH GL S NL+++NA++ +Y+ C L AR +FD + +D + +I
Sbjct: 154 GKKLHCHVVKFGLGS--NLYVQNALVKMYSLCGLMDMARGVFDR--RCKEDVFSWNLMIS 209
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R ES++L +EM + +S ++ D ++ +VH V +
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
R+ NA+++ Y G + A ++F ++ V+SWT ++ G V+ ++ R FD MP
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
R+ ++WT+MI GY+ G E+ + +EM G + T+ SVL+AC+ G + +G
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQ-SAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
W+ + K + V+VG +L+DMY KCG A VF +M +R+ W A++ GLA +
Sbjct: 389 WIKTYIDKNKIKN-DVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G G+ + +F M + ++PD +T++ +LSAC+HSG+V+Q R++F + S + I P + H
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
Y CMVD+LGRAG ++EA +++KMP+ PN +V G+LLG+ H +AE ++++E++
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELE 567
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P N + LL N+YA + + RR + I+K PG S I V+G H+F AGDKSH
Sbjct: 568 PDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSH 627
Query: 512 PRTSEIYLKLDDMICRLRLAGYVPNTTCQVLF 543
++ EIY+KL+++ A Y+P+T+ ++LF
Sbjct: 628 LQSEEIYMKLEELAQESTFAAYLPDTS-ELLF 658
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 199/605 (32%), Positives = 318/605 (52%), Gaps = 58/605 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
++ H +A + GL S N+F+ +A++ +Y A+ + D + + KD V TALI
Sbjct: 184 AQRSHGLAVILGLEVS-NVFVGSALVDMYVKFGKTREAKLVLDRVEE--KDVVLITALIV 240
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
++ E+++ F M + + L D G +H +VK GF
Sbjct: 241 GYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFES 300
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+++ +Y++ L+ ++ +VF IE P
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYP----------------------------- 331
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
N+V+WT +I G V NG + A ++M+ + N TL S L CS GR
Sbjct: 332 --NQVSWTSLISGLVQNGREEMALIEFRKMMRD-SIKPNSFTLSSALRGCSNLAMFEEGR 388
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HG K G+D G+ L+D+Y KCG +A +VF +S +V++ N ++ A +
Sbjct: 389 QIHGIVTK-YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQN 447
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G G+ +D+F M+ ++P+ VT +++L AC++S LVE+G + F +I +H
Sbjct: 448 GFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDH 506
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
YACMVDLLGRAG LEEAE+L ++ I P+ V+ +LL +C H K+++AE+I R+++E++
Sbjct: 507 YACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIE 565
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDK-S 510
P + IL+SN+YA +GK + + +K ++K P MS + ++ + H F AGD S
Sbjct: 566 PGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFS 625
Query: 511 HPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEV--EQVLFAHSEK 568
HP + +I L+++I + + GYV + +C + +EE E+ L HSEK
Sbjct: 626 HPNSEQILENLEELIKKSKDLGYVEDKSC-----------VFQDMEETAKERSLHQHSEK 674
Query: 569 LALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCS 628
LA+ F + GS + I KNLR+C DCHS IKI S + KREI+ RD RFH F+ GSCS
Sbjct: 675 LAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCS 733
Query: 629 CSDYW 633
C DYW
Sbjct: 734 CGDYW 738
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 6/260 (2%)
Query: 183 PSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEM 242
P+ +S + ++D +K ++ R VFDGM ER+ V W +I + + +KEA + + M
Sbjct: 97 PAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLM 156
Query: 243 VFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDL-GVMVGTSLVDMYAKC 301
+ + TL SV A S + HG AV +G ++ V VG++LVDMY K
Sbjct: 157 ITNNVLP-DEYTLSSVFKAFSDLSLEKEAQRSHGLAV-ILGLEVSNVFVGSALVDMYVKF 214
Query: 302 GRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALL 360
G+ A +V + ++VV A++ G + G V F M VE+V+P+ T+ ++L
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 361 SACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPN 420
+C + + G+ L + ++ + R ++++ L V K PN
Sbjct: 275 ISCGNLKDIGNGK-LIHGLMVKSGFESALASQTSLLTMYLRCSLVDDS-LRVFKCIEYPN 332
Query: 421 EVVLGSLLGSCYAHGKLQLA 440
+V SL+ +G+ ++A
Sbjct: 333 QVSWTSLISGLVQNGREEMA 352
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 308 bits (789), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 194/609 (31%), Positives = 311/609 (51%), Gaps = 57/609 (9%)
Query: 38 KQLHAVATVTGLLSS----PNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTA 93
K + V V G + S P ++ N IL ++ C + AR+LFDEIP+ ++ Y +
Sbjct: 137 KSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPE--RNLYSYYS 194
Query: 94 LIRRCPP----LESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG 149
+I +E+ +LF M + + LG VG Q+H +K G
Sbjct: 195 IISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLG 254
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFD 209
T V ++D+Y K G +E R F+
Sbjct: 255 VVDNTFVSCGLIDMYSKCG-------------------------------DIEDARCAFE 283
Query: 210 GMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC 269
MPE+ VAW +I GY +G+++EA LL +M G ++ TL ++ ++ +
Sbjct: 284 CMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMR-DSGVSIDQFTLSIMIRISTKLAKLE 342
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
+ + H ++ G++ ++ T+LVD Y+K GR+ A VF + R+N+++WNA++GG
Sbjct: 343 LTKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 330 AMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
A HG G V +F M+ V P+ VTF+A+LSAC++SGL EQG + F + V+ I+P
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPR 461
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
HYACM++LLGR G L+EA +++ P++ + +LL +C L+L + +L
Sbjct: 462 AMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLY 521
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
M P ++++ NMY GK +A L+ +G+ +P + + V Q H F +GD
Sbjct: 522 GMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGD 581
Query: 509 K--SHPRT--SEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFA 564
+ S+ T +IY K+D+++ + GY Q L D E +E E+V
Sbjct: 582 RFDSYNETVKRQIYQKVDELMEEISEYGYSEEE--QHLL-----PDVDE--KEEERVGRY 632
Query: 565 HSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQ 624
HSEKLA+ +GL++T +PL I +N RIC++CH ++ S + RE+VVRD RFH FK+
Sbjct: 633 HSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKE 692
Query: 625 GSCSCSDYW 633
G CSC YW
Sbjct: 693 GKCSCGGYW 701
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 233 KEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDV-CVGRWVHGFAVKAMGWDLGVMVG 291
+EAF L + + C F++ T +++ AC + + CV R V+GF + + G++ +
Sbjct: 104 REAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKR-VYGFMM-SNGFEPEQYMM 161
Query: 292 TSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKP 351
++ M+ KCG I A +F + RN+ ++ +++ G G ++F M EE+
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 352 -DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI---EHYAC-MVDLLGRAGHLE 406
+ TF +L A + G + G+Q V ++ + +C ++D+ + G +E
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQL-----HVCALKLGVVDNTFVSCGLIDMYSKCGDIE 276
Query: 407 EAELLVKKMPIRP----NEVVLGSLL 428
+A + MP + N V+ G L
Sbjct: 277 DARCAFECMPEKTTVAWNNVIAGYAL 302
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 176/511 (34%), Positives = 286/511 (55%), Gaps = 30/511 (5%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G Q+H++ + LS ++++ +A++ +Y+ C + A+++FDE+ ++ V + +LI
Sbjct: 171 GVQVHSLIAKSPFLS--DVYIGSALVDMYSKCGNVNDAQRVFDEM--GDRNVVSWNSLIT 226
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG-FG 151
+ P +E+L +F M + + D L VG +VH VVK
Sbjct: 227 CFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ NA +D+Y K + EAR +F + + +V++ T ++ G ++ R++F M
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 212 PERNEVAWTVMIVGYVGNGFTKEA---FWLLKEMVFGCGFELNCVT---LCSVLSACSQS 265
ERN V+W +I GY NG +EA F LLK E C T ++L AC+
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKR-------ESVCPTHYSFANILKACADL 399
Query: 266 GDVCVGRWVH------GFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV 319
++ +G H GF ++ G + + VG SL+DMY KCG + +VF+ M R+
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQS-GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 458
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
V+WNA++ G A +G G +++F M+E KPD +T + +LSAC H+G VE+GR YF
Sbjct: 459 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 518
Query: 379 LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ 438
+ + + P +HY CMVDLLGRAG LEEA+ ++++MP++P+ V+ GSLL +C H +
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT 578
Query: 439 LAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVD 498
L + + +L+E++P N+ ++LLSNMYA GK E + R+ ++K G+ K PG S I +
Sbjct: 579 LGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Query: 499 GQLHQFSAGDKSHPRTSEIYLKLDDMICRLR 529
G H F DKSHPR +I+ LD +I +R
Sbjct: 639 GHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 178/347 (51%), Gaps = 7/347 (2%)
Query: 141 VHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEG 200
VH+ V+K GF + N ++D Y K G L + R+VF ++ ++ +W V+ G+ K
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
++ +F MPER++ W M+ G+ + +EA M+ GF LN + SVLS
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA-MMHKEGFVLNEYSFASVLS 160
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
ACS D+ G VH K+ + V +G++LVDMY+KCG ++ A VF M RNVV
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKS-PFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDL 379
+WN+++ +G +D+F M+E V+PD VT +++SAC+ ++ G++ +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 380 ESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQL 439
++R +I VD+ + ++EA + MPIR V+ + + S YA
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR--NVIAETSMISGYAMAASTK 337
Query: 440 AEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGI 486
A +++ +M N L Y +G+ E+A S +LK+ +
Sbjct: 338 AARLM--FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 382
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 161/374 (43%), Gaps = 74/374 (19%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSH------------ 85
+ +HA +G S +F++N ++ Y+ C R++FD++PQ +
Sbjct: 40 RYVHASVIKSGF--SNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 86 -----------------KDSVDYTALIR------RCPPLESLQLFIEMRQLGLSIDXXXX 122
+D + +++ RC E+L F M + G ++
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCE--EALCYFAMMHKEGFVLNEYSF 155
Query: 123 XXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEV 182
L D N G QVHS + K F + +A++D+Y K G + +A++VF E
Sbjct: 156 ASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE--- 212
Query: 183 PSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEM 242
M +RN V+W +I + NG EA + +M
Sbjct: 213 ----------------------------MGDRNVVSWNSLITCFEQNGPAVEALDVF-QM 243
Query: 243 VFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCG 302
+ E + VTL SV+SAC+ + VG+ VHG VK +++ + VDMYAKC
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 303 RISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSA 362
RI A +F +M RNV+A +++ G AM KA MF M E + V++ AL++
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER---NVVSWNALIAG 360
Query: 363 CSHSGLVEQGRQYF 376
+ +G E+ F
Sbjct: 361 YTQNGENEEALSLF 374
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/605 (31%), Positives = 310/605 (51%), Gaps = 55/605 (9%)
Query: 41 HAVATVTGLLSSPNLF----LRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
H + + +L++P+L L + ++ +++ C ARK+FD++ S + A +
Sbjct: 149 HGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMA 208
Query: 96 ----RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
R P ++L ++++M + L D VG +H+ +VK
Sbjct: 209 IGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEK 268
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
V N ++ LY++ GL +ARKVF DGM
Sbjct: 269 VDQVVYNVLLKLYMESGLFDDARKVF-------------------------------DGM 297
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFG-CGFELNCVTLCSVLSACSQSGDVCV 270
ERN V W +I E F L ++M GF + TL ++L ACS+ +
Sbjct: 298 SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF--SWATLTTILPACSRVAALLT 355
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
G+ +H +K+ V + SL+DMY KCG + + VF M +++ +WN +L A
Sbjct: 356 GKEIHAQILKSKE-KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYA 414
Query: 331 MHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI 389
++G + V+++F M+E V PD +TF+ALLS CS +GL E G F +++ + + P +
Sbjct: 415 INGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPAL 474
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE 449
EHYAC+VD+LGRAG ++EA +++ MP +P+ + GSLL SC HG + + E +EL
Sbjct: 475 EHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFV 534
Query: 450 MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDK 509
++P N ++++SN+YA + + + R ++K+RG++K G S + V ++ F AG
Sbjct: 535 LEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGG 594
Query: 510 SHPRTSEIYLKL-DDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEK 568
R S+ Y K+ ++ + +GY PNT+ + D E E + HSE+
Sbjct: 595 YEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVL-------HDVDE--ETKANWVCGHSER 645
Query: 569 LALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCS 628
LA + LI T G P+ I KNLR+C DCHS +KI S + +R IV+RD RFH F G CS
Sbjct: 646 LATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICS 705
Query: 629 CSDYW 633
C DYW
Sbjct: 706 CKDYW 710
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 165/408 (40%), Positives = 245/408 (60%), Gaps = 5/408 (1%)
Query: 133 GDPNVGPQVHSGVVKFGFGKC-TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVV 191
G +G +H K G + V A++ +Y K G +AR VF +E + V+W +
Sbjct: 87 GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146
Query: 192 LDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELN 251
+DG ++ V++ +FD MPER+ ++WT MI G+V G+ +EA +EM G + +
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPD 205
Query: 252 CVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVF 311
V + + L+AC+ G + G WVH + V + + V V SL+D+Y +CG + A VF
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRY-VLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 312 KNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVE 370
NM +R VV+WN+V+ G A +G + F M E+ KPDAVTF L+ACSH GLVE
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 371 QGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGS 430
+G +YF+ ++ Y I P IEHY C+VDL RAG LE+A LV+ MP++PNEVV+GSLL +
Sbjct: 325 EGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAA 384
Query: 431 CYAHG-KLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKV 489
C HG + LAE++++ L +++ + +++LSNMYA GK E A+ RR +K G++K
Sbjct: 385 CSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQ 444
Query: 490 PGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNT 537
PG SSI +D +H F AGD +H T+ I L+ + LRL G V T
Sbjct: 445 PGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 150/376 (39%), Gaps = 84/376 (22%)
Query: 50 LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQ 105
+ N N ++ Y +A K+FD++P+ +D + +TA+I ++ E+L
Sbjct: 135 MEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPE--RDLISWTAMINGFVKKGYQEEALL 192
Query: 106 LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYV 165
F EM+ G+ D LG + G VH V+ F RV N+++DLY
Sbjct: 193 WFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYC 252
Query: 166 KFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVG 225
+ G + AR+VF +E +VVSW V IVG
Sbjct: 253 RCGCVEFARQVFYNMEKRTVVSWNSV-------------------------------IVG 281
Query: 226 YVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWD 285
+ NG E+ ++M GF+ + VT L+ACS G V G + F + +
Sbjct: 282 FAANGNAHESLVYFRKMQEK-GFKPDAVTFTGALTACSHVGLVEEG--LRYFQIMKCDYR 338
Query: 286 LGVMVG--TSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFP 343
+ + LVD+Y++ GR+ AL + ++M
Sbjct: 339 ISPRIEHYGCLVDLYSRAGRLEDALKLVQSMP---------------------------- 370
Query: 344 HMVEEVKPDAVTFMALLSACSHSG----LVEQGRQYFRDLESVYEIRPEIEHYACMVDLL 399
+KP+ V +LL+ACS+ G L E+ ++ DL +Y + ++
Sbjct: 371 -----MKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNV-----KSHSNYVILSNMY 420
Query: 400 GRAGHLEEAELLVKKM 415
G E A + +KM
Sbjct: 421 AADGKWEGASKMRRKM 436
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 193/600 (32%), Positives = 306/600 (51%), Gaps = 54/600 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+ +HA TG + ++ + N++ +Y A KLF + + KD V +T +I
Sbjct: 316 GRDIHAYVITTGF--AVDISVCNSLTQMYLNAGSWREAEKLFSRMER--KDIVSWTTMIS 371
Query: 97 ----RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
P +++ + M Q + D LGD + G ++H +K
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N ++++Y K + +A +F I P
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNI-------------------------------P 460
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+N ++WT +I G N EA L++M + N +TL + L+AC++ G + G+
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAALAACARIGALMCGK 518
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H ++ G L + +L+DMY +CGR++ A F N +++V +WN +L G +
Sbjct: 519 EIHAHVLRT-GVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSER 576
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G G VV++F MV+ V+PD +TF++LL CS S +V QG YF +E Y + P ++H
Sbjct: 577 GQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKH 635
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
YAC+VDLLGRAG L+EA ++KMP+ P+ V G+LL +C H K+ L E + + E+D
Sbjct: 636 YACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELD 695
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
+ Y+ILL N+YA GK + RR++K+ G+ G S + V G++H F + DK H
Sbjct: 696 KKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYH 755
Query: 512 PRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLAL 571
P+T EI L+ ++ G + SSS D TE +++ HSE+ A+
Sbjct: 756 PQTKEINTVLEGFYEKMSEVGLTKISE-------SSSMDETEISR--DEIFCGHSERKAI 806
Query: 572 CFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSD 631
FGLI+T G P+++ KNL +C++CH +K S +REI VRD FH FK G CSC D
Sbjct: 807 AFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 148/320 (46%), Gaps = 41/320 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK++H G ++ + NA++ +Y C AR LFD +P+ +D + + A+I
Sbjct: 215 GKEVHVHVVRYGY--ELDIDVVNALITMYVKCGDVKSARLLFDRMPR--RDIISWNAMIS 270
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
E L+LF MR L + D LGD +G +H+ V+ GF
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
VCN++ +Y+ G EA K+F +E +VSWT ++ G ++ +P
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG-----------YEYNFLP 379
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
++ + +M V + + +T+ +VLSAC+ GD+ G
Sbjct: 380 DKAIDTYRMMDQDSV---------------------KPDEITVAAVLSACATLGDLDTGV 418
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H A+KA V+V +L++MY+KC I AL +F N+ R+NV++W +++ GL ++
Sbjct: 419 ELHKLAIKARLISY-VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLN 477
Query: 333 GMGKAVVDMFPHMVEEVKPD 352
+ M ++P+
Sbjct: 478 NRCFEALIFLRQMKMTLQPN 497
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 36/243 (14%)
Query: 133 GDPNV--GPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTV 190
G P++ G +VH VV++G+ V NA++ +YVK G
Sbjct: 208 GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG---------------------- 245
Query: 191 VLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFEL 250
V+S R++FD MP R+ ++W MI GY NG E L M G +
Sbjct: 246 ---------DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR-GLSVDP 295
Query: 251 NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVV 310
+ +TL SV+SAC GD +GR +H + + G+ + + V SL MY G A +
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKL 354
Query: 311 FKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLV 369
F M R+++V+W ++ G + + +D + M ++ VKPD +T A+LSAC+ G +
Sbjct: 355 FSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 370 EQG 372
+ G
Sbjct: 415 DTG 417
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 181/428 (42%), Gaps = 82/428 (19%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
E+++L M++L +++D G +V+S + + NA +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 162 DLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTV 221
++V+FG L +A VFG+ M ERN +W V
Sbjct: 137 AMFVRFGNLVDAWYVFGK-------------------------------MSERNLFSWNV 165
Query: 222 MIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKA 281
++ GY G+ EA L M++ G + + T VL C D+ G+ VH V+
Sbjct: 166 LVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR- 224
Query: 282 MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDM 341
G++L + V +L+ MY KCG + A ++F M RR++++WNA++ G +GM +++
Sbjct: 225 YGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLEL 284
Query: 342 FPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRP----EIEHYACMV 396
F M V PD +T +++SAC G R+ RD+ + Y I +I +
Sbjct: 285 FFAMRGLSVDPDLMTLTSVISACELLG----DRRLGRDIHA-YVITTGFAVDISVCNSLT 339
Query: 397 DLLGRAGHLEEAELLVKKM----------------------------------PIRPNEV 422
+ AG EAE L +M ++P+E+
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 423 VLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHIL---LSNMYALSGKVEKA-NSFR 478
+ ++L +C G L ++ + ++ ++ Y I+ L NMY+ ++KA + F
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLIS--YVIVANNLINMYSKCKCIDKALDIFH 457
Query: 479 RVLKKRGI 486
+ +K I
Sbjct: 458 NIPRKNVI 465
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 171/501 (34%), Positives = 275/501 (54%), Gaps = 48/501 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G QLH+ G + ++++ ++ +YA AR FDE+P H+ V +TALI
Sbjct: 97 GLQLHSQIWRFGFCA--DMYVSTGVVDMYAKFGKMGCARNAFDEMP--HRSEVSWTALIS 152
Query: 97 ---RCPPLE-SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
RC L+ + +LF +M P V V+
Sbjct: 153 GYIRCGELDLASKLFDQM----------------------------PHVKDVVIY----- 179
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
NA+MD +VK G + AR++F E+ +V++WT ++ G + +++ R +FD MP
Sbjct: 180 -----NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
ERN V+W MI GY N +E L +EM + + VT+ SVL A S +G + +G
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
W H F V+ D V V T+++DMY+KCG I A +F M + V +WNA++ G A++
Sbjct: 295 WCHCF-VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALN 353
Query: 333 GMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
G +A +D+F M+ E KPD +T +A+++AC+H GLVE+GR++F + + + +IEHY
Sbjct: 354 GNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHY 412
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
CMVDLLGRAG L+EAE L+ MP PN ++L S L +C + ++ AE+I+++ VE++P
Sbjct: 413 GCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEP 472
Query: 453 LNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHP 512
N ++LL N+YA + + + V++K +K G S I ++ + +F +GD +HP
Sbjct: 473 QNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHP 532
Query: 513 RTSEIYLKLDDMICRLRLAGY 533
I+L L D++ + Y
Sbjct: 533 HRRSIHLVLGDLLMHMNEEKY 553
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 28/279 (10%)
Query: 200 GVESGRVVFDGMPERNEVAWT-VMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSV 258
G+ R +FD P+R++ + MI Y+ ++F L +++ F + T ++
Sbjct: 25 GIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTL 84
Query: 259 LSACSQSGDVCVGRWVHGFAVKAMGWDLG----VMVGTSLVDMYAKCGRISIALVVFKNM 314
+CS S +CV G + + W G + V T +VDMYAK G++ A F M
Sbjct: 85 TKSCSLS--MCV---YQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEM 139
Query: 315 SRRNVVAWNAVLGGLAMHG---MGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQ 371
R+ V+W A++ G G + + D PH+ D V + A++ SG +
Sbjct: 140 PHRSEVSWTALISGYIRCGELDLASKLFDQMPHV-----KDVVIYNAMMDGFVKSGDMTS 194
Query: 372 GRQYFRDL--ESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLG 429
R+ F ++ ++V I Y + D ++ A L MP R N V +++G
Sbjct: 195 ARRLFDEMTHKTVITWTTMIHGYCNIKD-------IDAARKLFDAMPER-NLVSWNTMIG 246
Query: 430 SCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALS 468
+ + Q ++ +E+ L+ + +LS + A+S
Sbjct: 247 GYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/451 (38%), Positives = 254/451 (56%), Gaps = 23/451 (5%)
Query: 189 TVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGF 248
T +LD K + S +FD MP R+ +W +I G V EA L K M G
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETE-GI 206
Query: 249 ELNCVTLCSVLSACSQSGDVCVGRWV-HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
+ VT+ + L ACS GDV G + HG++ + V+V + +DMY+KCG + A
Sbjct: 207 RRSEVTVVAALGACSHLGDVKEGENIFHGYS------NDNVIVSNAAIDMYSKCGFVDKA 260
Query: 308 LVVFKNMS-RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSH 365
VF+ + +++VV WN ++ G A+HG +++F + + +KPD V+++A L+AC H
Sbjct: 261 YQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRH 320
Query: 366 SGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLG 425
+GLVE G F ++ + + ++HY C+VDLL RAG L EA ++ M + P+ V+
Sbjct: 321 AGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQ 379
Query: 426 SLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRG 485
SLLG+ + +++AE RE+ EM N +LLSN+YA G+ + R ++ +
Sbjct: 380 SLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQ 439
Query: 486 IRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGC 545
++K+PG+S I G +H+F DKSH + EIY K+D++ ++R GYV T +
Sbjct: 440 VKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVL---- 495
Query: 546 SSSGDCTEALEEVEQVLFAHSEKLALCFGLI---STSSGSPLYIFKNLRICQDCHSAIKI 602
D E EE E L HSEKLA+ +GL+ SP+ + NLRIC DCH K
Sbjct: 496 ---HDIGE--EEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKH 550
Query: 603 ASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
S IYKREI+VRDR RFH FK GSCSC D+W
Sbjct: 551 ISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 14/259 (5%)
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGF-----ELNCVTLCSVLSA 261
+F +P+ W +I G+ G+ AF + M+ ++ +T L A
Sbjct: 59 IFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKA 118
Query: 262 CSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA 321
C+++ +H + G ++ T+L+D Y+K G + A +F M R+V +
Sbjct: 119 CARALCSSAMDQLH-CQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVAS 177
Query: 322 WNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLE 380
WNA++ GL ++++ M E ++ VT +A L ACSH G V++G F
Sbjct: 178 WNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS 237
Query: 381 SVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLA 440
+ I +D+ + G +++A + ++ + + V +++ HG+ A
Sbjct: 238 NDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRA 292
Query: 441 EKIVRELVE--MDPLNTEY 457
+I +L + + P + Y
Sbjct: 293 LEIFDKLEDNGIKPDDVSY 311
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 250/423 (59%), Gaps = 7/423 (1%)
Query: 100 PLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNA 159
P +S+ ++I+M + GL D RL + +G +H VVK G +CN
Sbjct: 89 PEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNT 148
Query: 160 VMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAW 219
++ +Y F ARK+F E+ ++V+W +LD K V S R+VFD M ER+ V W
Sbjct: 149 LIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTW 208
Query: 220 TVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAV 279
+ MI GYV G +A + +M+ + N VT+ SV+ AC+ G + G+ VH + +
Sbjct: 209 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 268
Query: 280 KAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA--WNAVLGGLAMHGMGKA 337
+ L V++ TSL+DMYAKCG I A VF S + A WNA++GGLA HG +
Sbjct: 269 D-VHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRE 327
Query: 338 VVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDL-ESVYEIRPEIEHYACM 395
+ +F M E ++ PD +TF+ LL+ACSH GLV++ +F+ L ES E P+ EHYACM
Sbjct: 328 SLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAE--PKSEHYACM 385
Query: 396 VDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNT 455
VD+L RAG +++A + +MPI+P +LG+LL C HG L+LAE + ++L+E+ P N
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 456 EYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTS 515
++ L+N+YA++ + A S R ++K+G++K+ G S + +DG H+F A DK+H +
Sbjct: 446 GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSD 505
Query: 516 EIY 518
+IY
Sbjct: 506 KIY 508
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 138/350 (39%), Gaps = 75/350 (21%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQ------------- 83
G LH +GL +LF+ N ++H+Y + + ARKLFDE+P
Sbjct: 127 GGSLHCSVVKSGL--EWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY 184
Query: 84 ----------------SHKDSVDYTALI----RRCPPLESLQLFIEMRQLGLS-IDXXXX 122
S +D V ++++I +R ++L++F +M ++G S +
Sbjct: 185 AKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTM 244
Query: 123 XXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEV 182
LG N G VH ++ + +++D+Y K G +G+A
Sbjct: 245 VSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA--------- 295
Query: 183 PSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEM 242
W+V VK E + + W +I G +GF +E+ L +M
Sbjct: 296 -----WSVFYRASVK---------------ETDALMWNAIIGGLASHGFIRESLQLFHKM 335
Query: 243 VFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCG 302
+ + +T +L+ACS G V W ++K G + +VD+ ++ G
Sbjct: 336 R-ESKIDPDEITFLCLLAACSHGGLVKEA-WHFFKSLKESGAEPKSEHYACMVDVLSRAG 393
Query: 303 RISIALVVFKNMSRRNVVAW-NAVLGGLAMHG-------MGKAVVDMFPH 344
+ A M + + A+L G HG +GK ++++ PH
Sbjct: 394 LVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPH 443
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/503 (34%), Positives = 280/503 (55%), Gaps = 18/503 (3%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIP-QSHKDSVDYTALIR 96
KQ H +TGL + NL + I AC+ H R + Q ++ + +IR
Sbjct: 32 KQSHCYMIITGL-NRDNLNVAKFI----EACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 97 RCPPLE-------SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG 149
L+ ++ ++ ++ L D R+ D G Q+H VV FG
Sbjct: 87 ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG 146
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFD 209
F V ++ +Y G LG+ARK+F E+ V V W +L G K ++ R + +
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLE 206
Query: 210 GMP--ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGD 267
MP RNEV+WT +I GY +G EA + + M+ E + VTL +VLSAC+ G
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME-NVEPDEVTLLAVLSACADLGS 265
Query: 268 VCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLG 327
+ +G + + V G + V + +++DMYAK G I+ AL VF+ ++ RNVV W ++
Sbjct: 266 LELGERICSY-VDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 328 GLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIR 386
GLA HG G + MF MV+ V+P+ VTF+A+LSACSH G V+ G++ F + S Y I
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIH 384
Query: 387 PEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRE 446
P IEHY CM+DLLGRAG L EA+ ++K MP + N + GSLL + H L+L E+ + E
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSE 444
Query: 447 LVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSA 506
L++++P N+ ++LL+N+Y+ G+ +++ R ++K G++K+ G SSI V+ ++++F +
Sbjct: 445 LIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFIS 504
Query: 507 GDKSHPRTSEIYLKLDDMICRLR 529
GD +HP+ I+ L +M +++
Sbjct: 505 GDLTHPQVERIHEILQEMDLQIQ 527
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 210/680 (30%), Positives = 323/680 (47%), Gaps = 98/680 (14%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G Q+H +G S NL N ++ +Y C P A K+FD +P+ ++ V ++AL+
Sbjct: 25 GGQVHCYLLKSG--SGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE--RNVVSWSALMS 80
Query: 97 ----RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF-- 150
SL LF EM + G+ + L G Q+H +K GF
Sbjct: 81 GHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEM 140
Query: 151 ------------GKCTRVC-----------------NAVMDLYVKFGLLGEARKVFGEI- 180
KC R+ NA++ +V G +A FG +
Sbjct: 141 MVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ 200
Query: 181 -----EVPSVVSWTVVL-------------------------------------DGVVKW 198
E P + T +L D VK
Sbjct: 201 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260
Query: 199 EGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSV 258
+ S R FD + E+ ++W+ +I+GY G EA L K + +++ L S+
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ-ELNSQIDSFALSSI 319
Query: 259 LSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRN 318
+ + + G+ + AVK + L V S+VDMY KCG + A F M ++
Sbjct: 320 IGVFADFALLRQGKQMQALAVK-LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKD 378
Query: 319 VVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFR 377
V++W V+ G HG+GK V +F M+ ++PD V ++A+LSACSHSG++++G + F
Sbjct: 379 VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFS 438
Query: 378 DLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKL 437
L + I+P +EHYAC+VDLLGRAG L+EA+ L+ MPI+PN + +LL C HG +
Sbjct: 439 KLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDI 498
Query: 438 QLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV 497
+L +++ + L+ +D N ++++SN+Y +G + + R + +G++K GMS + +
Sbjct: 499 ELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEI 558
Query: 498 DGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLA-GYVPNTTCQVLFGCSSSGDCTEALE 556
+ ++H F +G+ SHP T I L + RLR GYV ++ D + E
Sbjct: 559 EREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHEL-------HDIDD--E 609
Query: 557 EVEQVLFAHSEKLALCFGLIS---TSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVV 613
E+ L AHSEKLA+ L + G + +FKNLR+C DCH IK S I K VV
Sbjct: 610 SKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVV 669
Query: 614 RDRYRFHSFKQGSCSCSDYW 633
RD RFHSF+ G CSC DYW
Sbjct: 670 RDAVRFHSFEDGCCSCGDYW 689
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
Query: 254 TLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKN 313
L S+L C++ G G VH + +K+ G L ++ L+DMY KC +A VF +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKS-GSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 314 MSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQG 372
M RNVV+W+A++ G ++G K + +F M + + P+ TF L AC +E+G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 373 RQ-YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
Q + L+ +E+ E+ + +VD+ + G + EAE + +++ R
Sbjct: 127 LQIHGFCLKIGFEMMVEVGN--SLVDMYSKCGRINEAEKVFRRIVDR 171
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 288/530 (54%), Gaps = 48/530 (9%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQS--HKDSVDYTALI 95
+Q + V + PN+ L N+++ +A + P A +F E+ + D+ Y L+
Sbjct: 65 RQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLL 124
Query: 96 RRC------PPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG 149
+ C P ++ + IE +LGLS D R G +G + + +
Sbjct: 125 KACSGQSWLPVVKMMHNHIE--KLGLSSDIYVPNALIDCYSRCG--GLGVRDAMKLFEKM 180
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDG--------------- 194
+ T N+++ VK G L +AR++F E+ ++SW +LDG
Sbjct: 181 SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFE 240
Query: 195 ------VVKWE----------GVESGRVVFDGMP--ERNEVAWTVMIVGYVGNGFTKEAF 236
V W +E RV+FD MP +N V WT++I GY G KEA
Sbjct: 241 KMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEAD 300
Query: 237 WLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVD 296
L+ +MV G + + + S+L+AC++SG + +G +H +K V +L+D
Sbjct: 301 RLVDQMV-ASGLKFDAAAVISILAACTESGLLSLGMRIHSI-LKRSNLGSNAYVLNALLD 358
Query: 297 MYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVT 355
MYAKCG + A VF ++ ++++V+WN +L GL +HG GK +++F M E ++PD VT
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 356 FMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM 415
F+A+L +C+H+GL+++G YF +E VY++ P++EHY C+VDLLGR G L+EA +V+ M
Sbjct: 419 FIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Query: 416 PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKAN 475
P+ PN V+ G+LLG+C H ++ +A++++ LV++DP + + LLSN+YA + E
Sbjct: 479 PMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVA 538
Query: 476 SFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMI 525
R +K G+ K G SS+ ++ +H+F+ DKSHP++ +IY L +I
Sbjct: 539 DIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 231/394 (58%), Gaps = 10/394 (2%)
Query: 139 PQVHSGVVKFGFGKCTRVCNAVMDLYVK-FGLLGEARKVFGEIEVPSVVSWTVVLDGVVK 197
P VH+ + K GF V A++ Y + AR++F E+ +VVSWT +L G +
Sbjct: 146 PLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYAR 205
Query: 198 WEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCS 257
+ + +F+ MPER+ +W ++ NG EA L + M+ N VT+
Sbjct: 206 SGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVC 265
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAMGWDLG--VMVGTSLVDMYAKCGRISIALVVFKNMS 315
VLSAC+Q+G + + + +H FA + DL V V SLVD+Y KCG + A VFK S
Sbjct: 266 VLSACAQTGTLQLAKGIHAFAYRR---DLSSDVFVSNSLVDLYGKCGNLEEASSVFKMAS 322
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHM----VEEVKPDAVTFMALLSACSHSGLVEQ 371
++++ AWN+++ A+HG + + +F M + ++KPD +TF+ LL+AC+H GLV +
Sbjct: 323 KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSK 382
Query: 372 GRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSC 431
GR YF + + + I P IEHY C++DLLGRAG +EA ++ M ++ +E + GSLL +C
Sbjct: 383 GRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNAC 442
Query: 432 YAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPG 491
HG L LAE V+ LV ++P N Y +++N+Y G E+A R+++K + K PG
Sbjct: 443 KIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPG 502
Query: 492 MSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMI 525
S I +D ++HQF + DKSHP T EIY+ LD +I
Sbjct: 503 WSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 238/398 (59%), Gaps = 3/398 (0%)
Query: 134 DPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLD 193
D V ++H+ V+K GFG V +M++Y K G L A+K+F E+ V+ TV+++
Sbjct: 138 DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMIN 197
Query: 194 GVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCV 253
+ ++ +F + ++ V WT MI G V N +A L +EM N
Sbjct: 198 CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEF 256
Query: 254 TLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKN 313
T VLSACS G + +GRWVH F V+ +L VG +L++MY++CG I+ A VF+
Sbjct: 257 TAVCVLSACSDLGALELGRWVHSF-VENQRMELSNFVGNALINMYSRCGDINEARRVFRV 315
Query: 314 MSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQG 372
M ++V+++N ++ GLAMHG ++ F MV +P+ VT +ALL+ACSH GL++ G
Sbjct: 316 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 375
Query: 373 RQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCY 432
+ F ++ V+ + P+IEHY C+VDLLGR G LEEA ++ +PI P+ ++LG+LL +C
Sbjct: 376 LEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACK 435
Query: 433 AHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGM 492
HG ++L EKI + L E + ++ ++LLSN+YA SGK +++ R ++ GI K PG
Sbjct: 436 IHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGC 495
Query: 493 SSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRL 530
S+I VD Q+H+F GD +HP IY +L ++ LR
Sbjct: 496 STIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRF 533
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 141/326 (43%), Gaps = 42/326 (12%)
Query: 61 ILHVYAACALPSHARKLFDEIPQSHKDSVDYTA----LIRRCPPLESLQLFIEMRQLGLS 116
+++ Y+ C A +LF ++ KD+V +TA L+R ++L+LF EM+ +S
Sbjct: 195 MINCYSECGFIKEALELFQDVKI--KDTVCWTAMIDGLVRNKEMNKALELFREMQMENVS 252
Query: 117 IDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKV 176
+ LG +G VHS V V NA++++Y + G + EAR+V
Sbjct: 253 ANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRV 312
Query: 177 FGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAF 236
F RV M +++ +++ MI G +G + EA
Sbjct: 313 F---------------------------RV----MRDKDVISYNTMISGLAMHGASVEAI 341
Query: 237 WLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVD 296
++MV GF N VTL ++L+ACS G + +G V + + + +VD
Sbjct: 342 NEFRDMV-NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 297 MYAKCGRISIALVVFKNMS-RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVT 355
+ + GR+ A +N+ + + +L +HG + + + E PD+ T
Sbjct: 401 LLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGT 460
Query: 356 FMALLSACSHSGLVEQG---RQYFRD 378
++ L + + SG ++ R+ RD
Sbjct: 461 YVLLSNLYASSGKWKESTEIRESMRD 486
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 304/603 (50%), Gaps = 54/603 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK++H A V + + ++ + +IL +Y+ S+A ++F+ + Q ++ V + +I
Sbjct: 250 GKEIHCHA-VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ--RNIVAWNVMIG 306
Query: 96 ---RRCPPLESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
R ++ F +M Q GL D L G +H ++ GF
Sbjct: 307 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFL 362
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ A++D+Y + G L +S V+FD M
Sbjct: 363 PHMVLETALIDMYGECGQL-------------------------------KSAEVIFDRM 391
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
E+N ++W +I YV NG A L +E+ + + T+ S+L A ++S + G
Sbjct: 392 AEKNVISWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDSTTIASILPAYAESLSLSEG 450
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
R +H + VK+ W ++ SLV MYA CG + A F ++ ++VV+WN+++ A+
Sbjct: 451 REIHAYIVKSRYWS-NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAV 509
Query: 332 HGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
HG G+ V +F M+ V P+ TF +LL+ACS SG+V++G +YF ++ Y I P IE
Sbjct: 510 HGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIE 569
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HY CM+DL+GR G+ A+ +++MP P + GSLL + H + +AE ++ +M
Sbjct: 570 HYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKM 629
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
+ NT ++LL NMYA +G+ E N + +++ +GI + S++ G+ H F+ GD+S
Sbjct: 630 EHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRS 689
Query: 511 HPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLA 570
H T++IY LD + R+ G + C S ++ HS +LA
Sbjct: 690 HVATNKIYEVLDVVS---RMVG-----EEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLA 741
Query: 571 LCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCS 630
CFGLIST +G + + N RIC+ CH ++ AS + +REIVV D FH F G CSC
Sbjct: 742 TCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCG 801
Query: 631 DYW 633
+YW
Sbjct: 802 NYW 804
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 193/414 (46%), Gaps = 61/414 (14%)
Query: 46 VTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPP----L 101
VT ++ P L L +A L A +LFDE+ ++ D+ + +I+ +
Sbjct: 58 VTKQVNDPAL---TRALRGFADSRLMEDALQLFDEMNKA--DAFLWNVMIKGFTSCGLYI 112
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
E++Q + M G+ D + G ++H+ V+K GF VCN+++
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 162 DLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTV 221
LY+K G +A KVF E MPER+ V+W
Sbjct: 173 SLYMKLGCAWDAEKVFEE-------------------------------MPERDIVSWNS 201
Query: 222 MIVGYV--GNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAV 279
MI GY+ G+GF+ + L KEM+ CGF+ + + S L ACS +G+ +H AV
Sbjct: 202 MISGYLALGDGFS--SLMLFKEML-KCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 280 KAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVV 339
++ VMV TS++DMY+K G +S A +F M +RN+VAWN ++G A +G
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 340 DMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIR----PEIEHYA 393
F M E+ ++PD +T + LL A + + +GR Y +R P +
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHG-----YAMRRGFLPHMVLET 369
Query: 394 CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
++D+ G G L+ AE++ +M N + S++ + +GK A ++ +EL
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 221/455 (48%), Gaps = 51/455 (11%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GK++HA+ G +S ++++ N+++ +Y A K+F+E+P+ +D V + ++I
Sbjct: 149 GKKIHAMVIKLGFVS--DVYVCNSLISLYMKLGCAWDAEKVFEEMPE--RDIVSWNSMIS 204
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
L SL LF EM + G D + P +G ++H
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIH---------- 254
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
C+AV IE V+ T +LD K+ V +F+GM
Sbjct: 255 ----CHAVR----------------SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMI 294
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+RN VAW VMI Y NG +AF ++M G + + +T ++L A + + GR
Sbjct: 295 QRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGR 350
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HG+A++ G+ +++ T+L+DMY +CG++ A V+F M+ +NV++WN+++ +
Sbjct: 351 TIHGYAMRR-GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQN 409
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQ-YFRDLESVYEIRPEIE 390
G + +++F + + + PD+ T ++L A + S + +GR+ + ++S Y I
Sbjct: 410 GKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIIL 469
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV-- 448
+ +V + G LE+A + ++ + V S++ + HG +++ + E++
Sbjct: 470 N--SLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIAS 526
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKK 483
++P + + LL+ ++SG V++ + +K+
Sbjct: 527 RVNPNKSTFASLLAAC-SISGMVDEGWEYFESMKR 560
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 19/295 (6%)
Query: 169 LLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVG 228
+L + KV ++ P++ T L G +E +FD M + + W VMI G+
Sbjct: 51 VLRDRYKVTKQVNDPAL---TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTS 107
Query: 229 NGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGV 288
G EA MVF G + + T V+ + + + G+ +H +K +G+ V
Sbjct: 108 CGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIK-LGFVSDV 165
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE- 347
V SL+ +Y K G A VF+ M R++V+WN+++ G G G + + +F M++
Sbjct: 166 YVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKC 225
Query: 348 EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMV-----DLLGRA 402
KPD + M+ L ACSH + G++ + +R IE MV D+ +
Sbjct: 226 GFKPDRFSTMSALGACSHVYSPKMGKEI-----HCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 403 GHLEEAELLVKKMPIRPNEVVLGSLLGSCYA-HGKLQLAEKIVRELVEMDPLNTE 456
G + AE + M I+ N V ++G CYA +G++ A +++ E + L +
Sbjct: 281 GEVSYAERIFNGM-IQRNIVAWNVMIG-CYARNGRVTDAFLCFQKMSEQNGLQPD 333
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 184/631 (29%), Positives = 307/631 (48%), Gaps = 59/631 (9%)
Query: 50 LSSPNLFLRNAILHVYAACALPSHARKLFDE--IPQSHKDSVDYTALIR----RCPPLES 103
+ NL N+IL Y A L DE I D V + +L+ + ++
Sbjct: 150 MKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDA 209
Query: 104 LQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDL 163
+ + M+ GL G +G +H +++ V ++D+
Sbjct: 210 IAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDM 269
Query: 164 YVKFGLLGEARKVFGEIEVPSVVSWTVVLDGV-------------------------VKW 198
Y+K G L AR VF ++ ++V+W ++ G+ + W
Sbjct: 270 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW 329
Query: 199 EGVESGRVVFDGMPER---------------NEVAWTVMIVGYVGNGFTKEAFWLLKEMV 243
+ SG G PE+ N V+WT + G NG + A + +M
Sbjct: 330 NSLASGYATL-GKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 244 FGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGR 303
G N T+ ++L + G+ VHGF ++ V T+LVDMY K G
Sbjct: 389 EE-GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK-NLICDAYVATALVDMYGKSGD 446
Query: 304 ISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSA 362
+ A+ +F + +++ +WN +L G AM G G+ + F M+E ++PDA+TF ++LS
Sbjct: 447 LQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 506
Query: 363 CSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEV 422
C +SGLV++G +YF + S Y I P IEH +CMVDLLGR+G+L+EA ++ M ++P+
Sbjct: 507 CKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDAT 566
Query: 423 VLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLK 482
+ G+ L SC H L+LAE + L ++P N+ ++++ N+Y+ + E R +++
Sbjct: 567 IWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMR 626
Query: 483 KRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVL 542
+R S I +D +H F A K+HP +IY +L ++ ++ +GYVP+T+C
Sbjct: 627 NNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSC--- 683
Query: 543 FGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKI 602
D +++ E E++L H+EKLA+ +GLI +P+ + KN IC D H+ K
Sbjct: 684 ----IHQDISDS--EKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKY 737
Query: 603 ASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
S + REIV+++ R H F+ G CSC+D W
Sbjct: 738 MSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 189/392 (48%), Gaps = 19/392 (4%)
Query: 50 LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQ 105
L + + + +A + Y C A KLFDE+P+ +D + + ++ R ++++
Sbjct: 18 LDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPK--RDDLAWNEIVMVNLRSGNWEKAVE 75
Query: 106 LFIEMRQLGL-SIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLY 164
LF EM+ G + D + G G Q+H V++ G +CN+++ +Y
Sbjct: 76 LFREMQFSGAKAYDSTMVKLLQVCSNKEGFAE-GRQIHGYVLRLGLESNVSMCNSLIVMY 134
Query: 165 VKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP----ERNEVAWT 220
+ G L +RKVF ++ ++ SW +L K V+ + D M + + V W
Sbjct: 135 SRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWN 194
Query: 221 VMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVK 280
++ GY G +K+A +LK M G + + ++ S+L A ++ G + +G+ +HG+ ++
Sbjct: 195 SLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR 253
Query: 281 AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVD 340
W V V T+L+DMY K G + A +VF M +N+VAWN+++ GL+ + K
Sbjct: 254 NQLW-YDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA 312
Query: 341 MFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLL 399
+ M +E +KPDA+T+ +L S + G E+ ++ + P + + +
Sbjct: 313 LMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE-KGVAPNVVSWTAIFSGC 371
Query: 400 GRAGHLEEAELLVKKMP---IRPNEVVLGSLL 428
+ G+ A + KM + PN + +LL
Sbjct: 372 SKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 278/504 (55%), Gaps = 24/504 (4%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPS--HARKLFDEIPQSHKDSVD--YTA 93
KQLHA TG+ + +L R ++ P+ +ARKLFD H++S Y
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI--------PNLVYARKLFDH----HQNSCTFLYNK 52
Query: 94 LIR----RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG 149
LI+ P ES+ L+ + GL +HS + G
Sbjct: 53 LIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSG 112
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFD 209
F + C ++ Y K G L AR+VF E+ V W ++ G + +++ +FD
Sbjct: 113 FESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFD 172
Query: 210 GMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC 269
MP +N +WT +I G+ NG EA + M + N +T+ SVL AC+ G++
Sbjct: 173 SMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE 232
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNM-SRRNVVAWNAVLGG 328
+GR + G+A + G+ + V + ++MY+KCG I +A +F+ + ++RN+ +WN+++G
Sbjct: 233 IGRRLEGYA-RENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGS 291
Query: 329 LAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRP 387
LA HG + +F M+ E KPDAVTF+ LL AC H G+V +G++ F+ +E V++I P
Sbjct: 292 LATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISP 351
Query: 388 EIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
++EHY CM+DLLGR G L+EA L+K MP++P+ VV G+LLG+C HG +++AE L
Sbjct: 352 KLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEAL 411
Query: 448 VEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSS-IYVDGQLHQFSA 506
+++P N +++SN+YA + K + R+++KK + K G S + V +H+F+
Sbjct: 412 FKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTV 471
Query: 507 GDKSHPRTSEIYLKLDDMICRLRL 530
DKSHPR+ EIY L+++ R++L
Sbjct: 472 EDKSHPRSYEIYQVLEEIFRRMKL 495
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 197/620 (31%), Positives = 313/620 (50%), Gaps = 71/620 (11%)
Query: 36 PGKQLHAVATVTGLLSSPNLFLRNAILHVYAAC---ALPSHARKLFDEIPQSHKDSVDYT 92
PGKQ+H +A GL S +++ NA++ +Y C A A +F+ I K+ V +
Sbjct: 175 PGKQVHGLALKLGLHCS--IYVANAVISMYGRCHDGAAAYEAWTVFEAI--KFKNLVTWN 230
Query: 93 ALIR--RCPPL--ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGD--PNVGP----QVH 142
++I +C L +++ +F+ M G+ D + D PN Q+H
Sbjct: 231 SMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLH 290
Query: 143 SGVVKFGFGKCTRVCNAVMDLYVK-FGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGV 201
S VK G T V A++ +Y + + K+F E+ +V W G+
Sbjct: 291 SLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMS---------HCRDIVAWNGI 341
Query: 202 ESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSA 261
+ V+D PER + + G + ++ T SVL A
Sbjct: 342 ITAFAVYD--PER-----AIHLFGQLRQEKLSPDWY----------------TFSSVLKA 378
Query: 262 CSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA 321
C+ +H +K G+ ++ SL+ YAKCG + + + VF +M R+VV+
Sbjct: 379 CAGLVTARHALSIHAQVIKG-GFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS 437
Query: 322 WNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
WN++L ++HG +++ +F M ++ PD+ TF+ALLSACSH+G VE+G + FR +
Sbjct: 438 WNSMLKAYSLHGQVDSILPVFQKM--DINPDSATFIALLSACSHAGRVEEGLRIFRSMFE 495
Query: 382 VYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKL---Q 438
E P++ HYAC++D+L RA EAE ++K+MP+ P+ VV +LLGSC HG +
Sbjct: 496 KPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGK 555
Query: 439 LAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVD 498
LA ++ELVE P N+ +I +SN+Y G +AN + ++ +RK P +S +
Sbjct: 556 LAADKLKELVE--PTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIG 613
Query: 499 GQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEV 558
++H+F++G + P +Y +L +I L+ GYVP S+ E E+
Sbjct: 614 NKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEM--------RSASQDIEDEEQE 665
Query: 559 EQVLFAHSEKLALCFGLISTSSGSP-----LYIFKNLRICQDCHSAIKIASNIYKREIVV 613
E L HSEKLAL F ++ S + I KN RIC DCH+ +K+AS + +EI++
Sbjct: 666 EDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILM 725
Query: 614 RDRYRFHSFKQGSCSCSDYW 633
RD RFH FK SCSC+DYW
Sbjct: 726 RDSNRFHHFKDSSCSCNDYW 745
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 184 SVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMV 243
+V+ +++ K + R VFD MPERN V+WT +I GYV G +E F L M+
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 244 FGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGR 303
C N TL SVL++C G+ VHG A+K +G + V +++ MY +C
Sbjct: 155 SHCF--PNEFTLSSVLTSCRYEP----GKQVHGLALK-LGLHCSIYVANAVISMYGRCHD 207
Query: 304 ISIAL---VVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTF--MA 358
+ A VF+ + +N+V WN+++ +GK + +F M D V F
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM----HSDGVGFDRAT 263
Query: 359 LLSACS 364
LL+ CS
Sbjct: 264 LLNICS 269
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 257 SVLSACSQSGDVCVGRWVHGFAVK-AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
++ AC++ ++ G +H + + V++ L++MYAKCG I A VF M
Sbjct: 64 ALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP 123
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQ 374
RNVV+W A++ G G + +F M+ P+ T ++L++C + E G+Q
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRY----EPGKQ 178
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 261/473 (55%), Gaps = 31/473 (6%)
Query: 50 LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPLESLQLFIE 109
+S+PN+FL N+I+ Y +L ++ Y L+R+ L F
Sbjct: 68 VSNPNVFLYNSIIRAYTHNSLYCDVIRI-------------YKQLLRKSFELPDRFTFPF 114
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
M + S LG +G QVH + KFG NA++D+Y+KF
Sbjct: 115 MFKSCAS---------------LGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
L +A KVF E+ V+SW +L G + ++ + +F M ++ V+WT MI GY G
Sbjct: 160 LVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI 219
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVM 289
G EA +EM G E + ++L SVL +C+Q G + +G+W+H +A + G+
Sbjct: 220 GCYVEAMDFFREMQLA-GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERR-GFLKQTG 277
Query: 290 VGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-E 348
V +L++MY+KCG IS A+ +F M ++V++W+ ++ G A HG ++ F M +
Sbjct: 278 VCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAK 337
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
VKP+ +TF+ LLSACSH G+ ++G +YF + Y+I P+IEHY C++D+L RAG LE A
Sbjct: 338 VKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERA 397
Query: 409 ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALS 468
+ K MP++P+ + GSLL SC G L +A + LVE++P + ++LL+N+YA
Sbjct: 398 VEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADL 457
Query: 469 GKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKL 521
GK E + R++++ ++K PG S I V+ + +F +GD S P +EI + L
Sbjct: 458 GKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVL 510
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 39/256 (15%)
Query: 189 TVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGF 248
T ++D K E ++ +F+ + N + +I Y N + + K+++ F
Sbjct: 46 TKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRK-SF 104
Query: 249 EL-NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
EL + T + +C+ G +G+ VHG K G V+ +L+DMY K + A
Sbjct: 105 ELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCK-FGPRFHVVTENALIDMYMKFDDLVDA 163
Query: 308 LVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSG 367
VF M R+V++WN++L G A G K +F M+++ V++ A++S + G
Sbjct: 164 HKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKT---IVSWTAMISGYTGIG 220
Query: 368 LVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSL 427
+ +FR+++ L G I P+E+ L S+
Sbjct: 221 CYVEAMDFFREMQ-----------------LAG----------------IEPDEISLISV 247
Query: 428 LGSCYAHGKLQLAEKI 443
L SC G L+L + I
Sbjct: 248 LPSCAQLGSLELGKWI 263
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 276/529 (52%), Gaps = 67/529 (12%)
Query: 42 AVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPL 101
AV+T+T + PN+F+ NA+ + C SH P+
Sbjct: 824 AVSTMTQM-QEPNVFVYNALFKGFVTC---------------SH--------------PI 853
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
SL+L++ M L S+ G + + + KFGFG ++ ++
Sbjct: 854 RSLELYVRM--LRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLI 911
Query: 162 DLYVKFGLLGEARKVFGEIEVPSVVSWTV------------------------------- 190
D Y G + EARKVF E+ ++WT
Sbjct: 912 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 971
Query: 191 VLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFEL 250
+++G + +E +F+ MP ++ ++WT MI GY N +EA + +M+ G
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE-GIIP 1030
Query: 251 NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVV 310
+ VT+ +V+SAC+ G + +G+ VH + ++ G+ L V +G++LVDMY+KCG + AL+V
Sbjct: 1031 DEVTMSTVISACAHLGVLEIGKEVHMYTLQN-GFVLDVYIGSALVDMYSKCGSLERALLV 1089
Query: 311 FKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLV 369
F N+ ++N+ WN+++ GLA HG + + MF M +E VKP+AVTF+++ +AC+H+GLV
Sbjct: 1090 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 1149
Query: 370 EQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLG 429
++GR+ +R + Y I +EHY MV L +AG + EA L+ M PN V+ G+LL
Sbjct: 1150 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 1209
Query: 430 SCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKV 489
C H L +AE +L+ ++P+N+ Y+ LL +MYA + R +++ GI K+
Sbjct: 1210 GCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKI 1269
Query: 490 -PGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNT 537
PG SSI +D + H F+A DKSH + E+ L LD++ ++ LAGYV T
Sbjct: 1270 CPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQET 1318
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 199/604 (32%), Positives = 304/604 (50%), Gaps = 48/604 (7%)
Query: 40 LHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR--- 96
LH + G S + F N ++ Y + ARKLFDE+ + + V +T++I
Sbjct: 51 LHTLTLKLGFAS--DTFTVNHLVISYVKLKEINTARKLFDEMCEP--NVVSWTSVISGYN 106
Query: 97 -RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTR 155
P +L +F +M + D V P ++ F +
Sbjct: 107 DMGKPQNALSMFQKMHE---------------------DRPVPPN------EYTFASVFK 139
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE-- 213
C+A+ + + G AR + VVS ++V D K VE+ R VFD M
Sbjct: 140 ACSALAE--SRIGKNIHARLEISGLRRNIVVSSSLV-DMYGKCNDVETARRVFDSMIGYG 196
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFE-LNCVTLCSVLSACSQSGDVCVGR 272
RN V+WT MI Y N EA L + + N L SV+SACS G + G+
Sbjct: 197 RNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGK 256
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
HG + G++ +V TSL+DMYAKCG +S A +F + +V+++ +++ A H
Sbjct: 257 VAHGLVTRG-GYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKH 315
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G+G+A V +F MV + P+ VT + +L ACSHSGLV +G +Y + Y + P+ H
Sbjct: 316 GLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRH 375
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVL--GSLLGSCYAHGKLQLAEKIVRELVE 449
Y C+VD+LGR G ++EA L K + + + L G+LL + HG++++ + + L++
Sbjct: 376 YTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQ 435
Query: 450 MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDK 509
+ T +I LSN YA+SG E + S R +K+ G K S I ++ F AGD
Sbjct: 436 SNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDL 495
Query: 510 SHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKL 569
S + EI L D+ R++ G+ +++ EA +E+ + H E+L
Sbjct: 496 SCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSL---HCERL 552
Query: 570 ALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSC 629
AL +GL+ +GS + I NLR+C+DCH A K+ S I +REIVVRD RFH FK GSC+C
Sbjct: 553 ALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTC 612
Query: 630 SDYW 633
DYW
Sbjct: 613 RDYW 616
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 273/490 (55%), Gaps = 14/490 (2%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI-- 95
KQ+H V+G LS N +L N+++ Y A K+F +P H D + +I
Sbjct: 150 KQIHCHIIVSGCLSLGN-YLWNSLVKFYMELGNFGVAEKVFARMP--HPDVSSFNVMIVG 206
Query: 96 --RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG--FG 151
++ LE+L+L+ +M G+ D L D +G VH + + G +
Sbjct: 207 YAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYS 266
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ NA++D+Y K G A++ F ++ + SW ++ G V+ +E+ + VFD M
Sbjct: 267 SNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQM 326
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFW-LLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
P+R+ V+W ++ GY G + L EM + + VT+ S++S + +G++
Sbjct: 327 PKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSH 386
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
GRWVHG ++ + + ++L+DMY KCG I A +VFK + ++V W +++ GLA
Sbjct: 387 GRWVHGLVIR-LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 331 MHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI 389
HG G+ + +F M EE V P+ VT +A+L+ACSHSGLVE+G F ++ + PE
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPET 505
Query: 390 EHYACMVDLLGRAGHLEEAELLV-KKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
EHY +VDLL RAG +EEA+ +V KKMP+RP++ + GS+L +C ++ AE + EL+
Sbjct: 506 EHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELL 565
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
+++P ++LLSN+YA G+ ++ R ++ RG++K G SS+ LH+F A +
Sbjct: 566 KLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAE 625
Query: 509 K-SHPRTSEI 517
K +HPR +EI
Sbjct: 626 KQNHPRWTEI 635
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 268/509 (52%), Gaps = 44/509 (8%)
Query: 39 QLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI--- 95
Q HA GL S P F+RN+++ Y++ L A +LFD KD V +TA+I
Sbjct: 124 QFHAHIVKFGLDSDP--FVRNSLISGYSSSGLFDFASRLFD--GAEDKDVVTWTAMIDGF 179
Query: 96 -RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC- 153
R E++ F+EM++ G++ + ++ D G VH ++ G KC
Sbjct: 180 VRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCD 239
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
+ ++++D+Y K +A+KVF E MP
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDE-------------------------------MPS 268
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
RN V WT +I GYV + + + +EM+ N TL SVLSAC+ G + GR
Sbjct: 269 RNVVTWTALIAGYVQSRCFDKGMLVFEEML-KSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
VH + +K ++ GT+L+D+Y KCG + A++VF+ + +NV W A++ G A HG
Sbjct: 328 VHCYMIKN-SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 334 MGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
+ D+F M+ V P+ VTFMA+LSAC+H GLVE+GR+ F ++ + + P+ +HY
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
ACMVDL GR G LEEA+ L+++MP+ P VV G+L GSC H +L + ++++ P
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQP 506
Query: 453 LNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHP 512
++ + LL+N+Y+ S ++ R+ +K + + K PG S I V G+L +F A D P
Sbjct: 507 SHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKP 566
Query: 513 -RTSEIYLKLDDMICRLRLAGYVPNTTCQ 540
+ ++Y LD + ++RL + + T +
Sbjct: 567 LESDDLYKTLDTVGVQMRLPDELEDVTAE 595
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 274/492 (55%), Gaps = 18/492 (3%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+++H A GL + ++ N+++ +YA+ K+FDE+PQ +D V + LI
Sbjct: 65 GEKVHGYAVKAGL--EFDSYVSNSLMGMYASLGKIEITHKVFDEMPQ--RDVVSWNGLIS 120
Query: 97 RCPP----LESLQLFIEMRQ-LGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
+++ +F M Q L D L + +G +++ VV F
Sbjct: 121 SYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFE 179
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
R+ NA++D++ K G L +AR VF + +V WT ++ G V ++ RV+F+
Sbjct: 180 MSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERS 239
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
P ++ V WT M+ GYV EA L + M G + L S+L+ C+Q+G + G
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ-TAGIRPDNFVLVSLLTGCAQTGALEQG 298
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+W+HG+ + + +VGT+LVDMYAKCG I AL VF + R+ +W +++ GLAM
Sbjct: 299 KWIHGY-INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAM 357
Query: 332 HGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+GM +D++ M V+ DA+TF+A+L+AC+H G V +GR+ F + + ++P+ E
Sbjct: 358 NGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSE 417
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEV---VLGSLLGSCYAHGKLQLAEKIVREL 447
H +C++DLL RAG L+EAE L+ KM +E V SLL + +G +++AE++ +L
Sbjct: 418 HCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKL 477
Query: 448 VEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAG 507
+++ ++ H LL+++YA + + E + RR +K GIRK PG SSI +DG H+F G
Sbjct: 478 EKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVG 537
Query: 508 DK--SHPRTSEI 517
D SHP+ EI
Sbjct: 538 DDLLSHPKMDEI 549
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 124/302 (41%), Gaps = 65/302 (21%)
Query: 104 LQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDL 163
L LF E+R GL D RL G +VH VK G + V N++M +
Sbjct: 31 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM 90
Query: 164 YVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMI 223
Y G + KVF E MP+R+ V+W +I
Sbjct: 91 YASLGKIEITHKVFDE-------------------------------MPQRDVVSWNGLI 119
Query: 224 VGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMG 283
YVGNG ++A + K M + + T+ S LSACS ++ +G ++ F V
Sbjct: 120 SSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-- 177
Query: 284 WDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRN------------------------- 318
+++ V +G +LVDM+ KCG + A VF +M +N
Sbjct: 178 FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFE 237
Query: 319 ------VVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQ 371
VV W A++ G +++F M ++PD ++LL+ C+ +G +EQ
Sbjct: 238 RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQ 297
Query: 372 GR 373
G+
Sbjct: 298 GK 299
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 174/499 (34%), Positives = 278/499 (55%), Gaps = 26/499 (5%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPS---HARKLFDEIPQSHKDSVDYTAL 94
KQ+HA TGL+S R CA PS +A +F I +HK+ + +
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAF----CCASPSDMNYAYLVFTRI--NHKNPFVWNTI 95
Query: 95 IR----RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXX--RLGDPNVGPQVHSGVVKF 148
IR P ++ +FI+M S+ RLG G Q+H V+K
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 149 GFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVF 208
G + + N ++ +YV G L EA ++F + VV+W ++ G K ++ + +F
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 209 DGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEM----VFGCGFELNCVTLCSVLSACSQ 264
D MP+RN V+W MI G+V NG K+A + +EM V GF T+ S+L+AC+
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF-----TMVSLLNACAY 270
Query: 265 SGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNA 324
G GRW+H + V+ ++L +V T+L+DMY KCG I L VF+ ++ + WN+
Sbjct: 271 LGASEQGRWIHEYIVRNR-FELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNS 329
Query: 325 VLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVY 383
++ GLA +G + +D+F + ++PD+V+F+ +L+AC+HSG V + ++FR ++ Y
Sbjct: 330 MILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKY 389
Query: 384 EIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKI 443
I P I+HY MV++LG AG LEEAE L+K MP+ + V+ SLL +C G +++A++
Sbjct: 390 MIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRA 449
Query: 444 VRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQ 503
+ L ++DP T ++LLSN YA G E+A R ++K+R + K G SSI VD ++H+
Sbjct: 450 AKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHE 509
Query: 504 FSAGDKSHPRTSEIYLKLD 522
F + +HP+++EIY LD
Sbjct: 510 FISCGGTHPKSAEIYSLLD 528
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/472 (32%), Positives = 263/472 (55%), Gaps = 13/472 (2%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G Q+H TGL S +LFL+N ++ +Y C +R++FD +P+ +DSV Y ++I
Sbjct: 140 GMQIHGFLKKTGLWS--DLFLQNCLIGLYLKCGCLGLSRQMFDRMPK--RDSVSYNSMID 195
Query: 97 ---RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
+C + S + ++ + ++ + G + S + K
Sbjct: 196 GYVKCGLIVSARELFDL----MPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKD 251
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
N+++D YVK G + +A+ +F + VV+W ++DG K V + +FD MP
Sbjct: 252 LISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPH 311
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
R+ VA+ M+ GYV N + EA + +M + TL VL A +Q G +
Sbjct: 312 RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID 371
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
+H + V+ + LG +G +L+DMY+KCG I A++VF+ + +++ WNA++GGLA+HG
Sbjct: 372 MHLYIVEKQFY-LGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 430
Query: 334 MGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
+G++ DM + +KPD +TF+ +L+ACSHSGLV++G F + ++I P ++HY
Sbjct: 431 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 490
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
CMVD+L R+G +E A+ L+++MP+ PN+V+ + L +C H + + E + + L+
Sbjct: 491 GCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAG 550
Query: 453 LNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQF 504
N ++LLSNMYA G + R ++K+R I K+PG S I +DG++H+F
Sbjct: 551 YNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 121/261 (46%), Gaps = 40/261 (15%)
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
G ++ +L VL ACS+ G V G +HGF K W + + L+ +Y KCG + +
Sbjct: 116 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWS-DLFLQNCLIGLYLKCGCLGL 174
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHS 366
+ +F M +R+ V++N+++ G G+ + ++F M E+K + +++ +++S + +
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMK-NLISWNSMISGYAQT 233
Query: 367 ---------------------------GLVEQGRQYFRDLESVYEIRP--EIEHYACMVD 397
G V+ GR D + ++++ P ++ +A M+D
Sbjct: 234 SDGVDIASKLFADMPEKDLISWNSMIDGYVKHGR--IEDAKGLFDVMPRRDVVTWATMID 291
Query: 398 LLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD----PL 453
+ G + A+ L +MP R +VV + + + Y K + + +E + P
Sbjct: 292 GYAKLGFVHHAKTLFDQMPHR--DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPD 349
Query: 454 NTEYHILLSNMYALSGKVEKA 474
+T I+L + L G++ KA
Sbjct: 350 DTTLVIVLPAIAQL-GRLSKA 369
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 174/588 (29%), Positives = 288/588 (48%), Gaps = 63/588 (10%)
Query: 61 ILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMRQLGLS 116
++ Y + + A ++F + + K+++ Y AL+ R L++L+LF +M Q G+
Sbjct: 357 MITAYMSFGMVDSAVEIFANVTE--KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 117 IDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG--FGKCTRVCNAVMDLYVKFGLLGEAR 174
+ + + V Q+H +KFG F C + A++D+ + + +A
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQT--ALLDMCTRCERMADAE 472
Query: 175 KVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
++F + W LD + A T +I GY NG +
Sbjct: 473 EMFDQ--------WPSNLD---------------------SSKATTSIIGGYARNGLPDK 503
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
A L + L+ V+L +L+ C G +G +H +A+KA G+ + +G SL
Sbjct: 504 AVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKA-GYFSDISLGNSL 562
Query: 295 VDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDA 353
+ MYAKC A+ +F M +V++WN+++ + G + ++ M E E+KPD
Sbjct: 563 ISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDI 622
Query: 354 VTFMALLSAC--SHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELL 411
+T ++SA + S + R F ++++Y+I P EHY V +LG G LEEAE
Sbjct: 623 ITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDT 682
Query: 412 VKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKV 471
+ MP++P VL +LL SC H +A+++ + ++ P +IL SN+Y+ SG
Sbjct: 683 INSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFW 742
Query: 472 EKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLA 531
++ R +++RG RK P S I + ++H F A D SHP+ +IY L+ +I
Sbjct: 743 HRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKV 802
Query: 532 GYVPNTTCQVLFGCSSSGDCTEALEEVEQ-----VLFAHSEKLALCFGLISTSS-GSPLY 585
GY PNT L+EV++ LF HS KLA+ +G++S+++ G P+
Sbjct: 803 GYEPNTEY--------------VLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVR 848
Query: 586 IFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
+ KN+ +C DCH K S + KREIV+RD FH F G CSC D W
Sbjct: 849 VMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 164/361 (45%), Gaps = 22/361 (6%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPS--HARKLFDEIPQSHKDSVDY--T 92
G Q+H + +G L+S +F+ N+++ +Y + S KLFDEIPQ S + +
Sbjct: 200 GIQIHGLIVKSGFLNS--VFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVS 257
Query: 93 ALIRRCPPLESLQLFIEMRQL-GLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
+L++ ++ LF EM ++ G +D G ++H ++ G
Sbjct: 258 SLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLM 317
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ V NA++ Y KF + + ++ + V++T ++ + + V+S +F +
Sbjct: 318 QELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV 377
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
E+N + + ++ G+ NG +A L +M+ G EL +L S + AC + V
Sbjct: 378 TEKNTITYNALMAGFCRNGHGLKALKLFTDML-QRGVELTDFSLTSAVDACGLVSEKKVS 436
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR--NVVAWNAVLGGL 329
+HGF +K G + T+L+DM +C R++ A +F + A +++GG
Sbjct: 437 EQIHGFCIK-FGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGY 495
Query: 330 AMHGMGKAVVDMFPHMVEEVK--PDAVTFMALLSACSHSGLVEQGRQ---------YFRD 378
A +G+ V +F + E K D V+ +L+ C G E G Q YF D
Sbjct: 496 ARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSD 555
Query: 379 L 379
+
Sbjct: 556 I 556
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 146/354 (41%), Gaps = 72/354 (20%)
Query: 57 LRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMRQ 112
L NA++ Y P A +F + S V YTALI R +E+L++F MR+
Sbjct: 116 LGNALISTYLKLGFPREAILVF--VSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRK 173
Query: 113 LGL-SIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKF--GL 169
GL + R+ ++G Q+H +VK GF V N++M LY K
Sbjct: 174 AGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSS 233
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ K+F EI V SW V+ +VK
Sbjct: 234 CDDVLKLFDEIPQRDVASWNTVVSSLVK-------------------------------E 262
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVK--------- 280
G + +AF L EM GF ++ TL ++LS+C+ S + GR +HG A++
Sbjct: 263 GKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSV 322
Query: 281 --------AMGWDL-------------GVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV 319
+ WD+ + T ++ Y G + A+ +F N++ +N
Sbjct: 323 NNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNT 382
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGR 373
+ +NA++ G +G G + +F M++ + +T +L SA GLV + +
Sbjct: 383 ITYNALMAGFCRNGHGLKALKLFTDMLQ--RGVELTDFSLTSAVDACGLVSEKK 434
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 248/458 (54%), Gaps = 12/458 (2%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDE--IPQSHKDSVDYTALI 95
K + ++ + SPN F N+++ YA + P A +F E + D +T ++
Sbjct: 88 KTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVL 147
Query: 96 RRCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
+ C E Q+ + GL D R G + +V +
Sbjct: 148 KACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPV---- 203
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ N+++ Y++ GL+ EAR +F E+E +V SW ++ G V+ + VFD M
Sbjct: 204 RDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSM 263
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
P R+ V+W M+ Y G E + +M+ + + TL SVLSAC+ G + G
Sbjct: 264 PVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQG 323
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
WVH + + G ++ + T+LVDMY+KCG+I AL VF+ S+R+V WN+++ L++
Sbjct: 324 EWVHVY-IDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSV 382
Query: 332 HGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
HG+GK +++F MV E KP+ +TF+ +LSAC+H G+++Q R+ F + SVY + P IE
Sbjct: 383 HGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIE 442
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HY CMVDLLGR G +EEAE LV ++P ++L SLLG+C G+L+ AE+I L+E+
Sbjct: 443 HYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLEL 502
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRK 488
+ ++ + +SN+YA G+ EK RR ++ + +
Sbjct: 503 NLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 136/316 (43%), Gaps = 42/316 (13%)
Query: 212 PERNEVAWTVMIVGYVG--NGFTKE--------------AFWLLKEMVFGCGFELNCVTL 255
PE V++ I+ +G NGFT A + +EM+ G F + +
Sbjct: 85 PEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFP-DKYSF 143
Query: 256 CSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
VL AC+ GR +HG +K+ G V V +LV++Y + G IA V M
Sbjct: 144 TFVLKACAAFCGFEEGRQIHGLFIKS-GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP 202
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQY 375
R+ V+WN++L G+ +F M EE ++ FM +S + +GLV++ ++
Sbjct: 203 VRDAVSWNSLLSAYLEKGLVDEARALFDEM-EERNVESWNFM--ISGYAAAGLVKEAKEV 259
Query: 376 F-----RDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGS 430
F RD+ S + H C ++ LE ++ +P+ L S+L +
Sbjct: 260 FDSMPVRDVVSWNAMVTAYAHVGCYNEV------LEVFNKMLDDSTEKPDGFTLVSVLSA 313
Query: 431 CYAHGKLQLAEKIVRELVEMDPLNTEYHILLS----NMYALSGKVEKANSFRRVLKKRGI 486
C + G L E + V +D E L+ +MY+ GK++KA R K
Sbjct: 314 CASLGSLSQGEWV---HVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSK--- 367
Query: 487 RKVPGMSSIYVDGQLH 502
R V +SI D +H
Sbjct: 368 RDVSTWNSIISDLSVH 383
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 272/506 (53%), Gaps = 45/506 (8%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI-- 95
KQ+H + S ++FL +A++ Y C S A+ +F + + D V +TA+I
Sbjct: 360 KQIHCYIMRHSI--SLDIFLTSALIDAYFKCRGVSMAQNIFSQC--NSVDVVVFTAMISG 415
Query: 96 --RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
++SL++F + ++ +S + L +G ++H ++K GF
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNR 475
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
+ AV+D+Y K G + A ++F + + +
Sbjct: 476 CNIGCAVIDMYAKCGRMNLAYEIF-------------------------------ERLSK 504
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
R+ V+W MI + A + ++M G +CV++ + LSAC+ G+
Sbjct: 505 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS-GICYDCVSISAALSACANLPSESFGKA 563
Query: 274 VHGFAVK-AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HGF +K ++ D V ++L+DMYAKCG + A+ VFK M +N+V+WN+++ H
Sbjct: 564 IHGFMIKHSLASD--VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNH 621
Query: 333 GMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
G K + +F MVE+ ++PD +TF+ ++S+C H G V++G ++FR + Y I+P+ E
Sbjct: 622 GKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQE 681
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HYAC+VDL GRAG L EA VK MP P+ V G+LLG+C H ++LAE +L+++
Sbjct: 682 HYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDL 741
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
DP N+ Y++L+SN +A + + E R ++K+R ++K+PG S I ++ + H F +GD +
Sbjct: 742 DPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVN 801
Query: 511 HPRTSEIYLKLDDMICRLRLAGYVPN 536
HP +S IY L+ ++ LRL GY+P
Sbjct: 802 HPESSHIYSLLNSLLGELRLEGYIPQ 827
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 207/459 (45%), Gaps = 47/459 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G QLH + V+G+ ++ +N++L +Y+ C A KLF + S D+V + +I
Sbjct: 258 GVQLHGLVVVSGVDFEGSI--KNSLLSMYSKCGRFDDASKLFRMM--SRADTVTWNCMIS 313
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ ESL F EM G+ D + + Q+H +++
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ +A++D Y K + A+ +F + V
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV--------------------------- 406
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
V +T MI GY+ NG ++ + + +V N +TL S+L + +GR
Sbjct: 407 ----VVFTAMISGYLHNGLYIDSLEMFRWLV-KVKISPNEITLVSILPVIGILLALKLGR 461
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HGF +K G+D +G +++DMYAKCGR+++A +F+ +S+R++V+WN+++ A
Sbjct: 462 ELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 333 GMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
A +D+F M V + D V+ A LSAC++ G+ + + ++
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKA-IHGFMIKHSLASDVYS 579
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE-- 449
+ ++D+ + G+L+ A + K M N V S++ +C HGKL+ + + E+VE
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 638
Query: 450 -MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIR 487
+ P + ++S+ + E FR + + GI+
Sbjct: 639 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 148/368 (40%), Gaps = 50/368 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GKQ+HA V + S + + IL +YA C S K+F + + ++I
Sbjct: 54 GKQVHAFLIVNSI--SGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIIS 111
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R ++L + +M G+S D L + + V G
Sbjct: 112 SFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDC 171
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V ++++ Y+++G +I+VPS + FD +
Sbjct: 172 NEFVASSLIKAYLEYG----------KIDVPSKL---------------------FDRVL 200
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+++ V W VM+ GY G M N VT VLS C+ + +G
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD-QISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HG V + G D + SL+ MY+KCGR A +F+ MSR + V WN ++ G
Sbjct: 260 QLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G+ + + F M+ V PDA+TF +LL + S F +LE +I I
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK----------FENLEYCKQIHCYIMR 368
Query: 392 YACMVDLL 399
++ +D+
Sbjct: 369 HSISLDIF 376
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 177/409 (43%), Gaps = 44/409 (10%)
Query: 45 TVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR---RCPPL 101
TV+ L N F+ ++++ Y KLFD + Q KD V + ++ +C L
Sbjct: 163 TVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ--KDCVIWNVMLNGYAKCGAL 220
Query: 102 ES-LQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAV 160
+S ++ F MR +S + ++G Q+H VV G + N++
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 161 MDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWT 220
+ +Y K G +A K+F M + V W
Sbjct: 281 LSMYSKCGRFDDASKLFRM-------------------------------MSRADTVTWN 309
Query: 221 VMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVK 280
MI GYV +G +E+ EM+ G + +T S+L + S+ ++ + +H + ++
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMI-SSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368
Query: 281 AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVD 340
L + + ++L+D Y KC +S+A +F + +VV + A++ G +G+ ++
Sbjct: 369 H-SISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 341 MFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQ-YFRDLESVYEIRPEIEHYACMVDL 398
MF +V+ ++ P+ +T +++L ++ GR+ + ++ ++ R I ++D+
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIG--CAVIDM 485
Query: 399 LGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+ G + A + +++ R + V S++ C A I R++
Sbjct: 486 YAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 38/260 (14%)
Query: 219 WTVMIVGYVGNGFTKEAF-WLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
W +I +V NG +A + K + FG +++ T ++ AC + G
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS--TFPCLVKACVALKNF-KGIDFLSD 162
Query: 278 AVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKA 337
V ++G D V +SL+ Y + G+I + +F + +++ V WN +L G A G +
Sbjct: 163 TVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS 222
Query: 338 VVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQY--------------------- 375
V+ F M ++++ P+AVTF +LS C+ L++ G Q
Sbjct: 223 VIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLS 282
Query: 376 -------FRDLESVYEI--RPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVV 423
F D ++ + R + + CM+ ++G +EE+ +M + P+ +
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 424 LGSLLGSCYAHGKLQLAEKI 443
SLL S L+ ++I
Sbjct: 343 FSSLLPSVSKFENLEYCKQI 362
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 185/646 (28%), Positives = 304/646 (47%), Gaps = 133/646 (20%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+Q+H TG N+ N +L +YA C S A LF E + K++V +T+++
Sbjct: 144 GEQIHGHTIKTGFDLDVNVV--NGLLAMYAQCKRISEAEYLF-ETMEGEKNNVTWTSMLT 200
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ ++++ F ++R+ G + + VG QVH +VK GF
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 153 CTRVCNAVMDLY-------------------------------VKFGLLGEARKVFG--- 178
V +A++D+Y V+ GL+GEA +FG
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 179 -------EIEVPSVVSW------------------------------TVVLDGVVKWEGV 201
+ +PS+++ ++D K +
Sbjct: 321 ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIM 380
Query: 202 ESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSA 261
+S VF+GM E++ ++WT ++ G NG EA L M G G + + SVLSA
Sbjct: 381 DSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG-GITPDKIVTASVLSA 439
Query: 262 CSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA 321
++ + G+ VHG +K+ G+ + V SLV MY KCG + A V+F +M R+++
Sbjct: 440 SAELTLLEFGQQVHGNYIKS-GFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLIT 498
Query: 322 WNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
W ++ G A +GL+E ++YF + +
Sbjct: 499 WTCLIVGYA----------------------------------KNGLLEDAQRYFDSMRT 524
Query: 382 VYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAE 441
VY I P EHYACM+DL GR+G + E L+ +M + P+ V ++L + HG ++ E
Sbjct: 525 VYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGE 584
Query: 442 KIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQL 501
+ + L+E++P N ++ LSNMY+ +G+ ++A + RR++K R I K PG S + G++
Sbjct: 585 RAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKV 644
Query: 502 HQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQV 561
H F + D+ HPR EIY K+D+M+ ++ AGY D + AL ++++
Sbjct: 645 HSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYF--------------ADMSFALHDLDKE 690
Query: 562 -----LFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKI 602
L HSEKLA+ FGL+ SG+P+ I KNLR+C DCHSA+K+
Sbjct: 691 GKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKL 736
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 190/460 (41%), Gaps = 74/460 (16%)
Query: 56 FLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMR 111
F N ++ Y+ S A KLF P K+++ + ALI + +E+ LF EM+
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPV--KNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 112 QLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLG 171
G+ + L G Q+H +K GF V N ++ +Y + +
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 172 EARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGF 231
EA +F +E E+N V WT M+ GY NGF
Sbjct: 178 EAEYLFETME------------------------------GEKNNVTWTSMLTGYSQNGF 207
Query: 232 TKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVG 291
+A +++ G + N T SVL+AC+ VG VH VK+ G+ + V
Sbjct: 208 AFKAIECFRDLRRE-GNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQ 265
Query: 292 TSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVK 350
++L+DMYAKC + A + + M +VV+WN+++ G G+ + MF M E ++K
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 351 PDAVTFMALL------------SACSHSGLVEQGRQYFRDLES----------------- 381
D T ++L ++ +H +V+ G ++ + +
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 382 VYE--IRPEIEHYACMVDLLGRAGHLEEAELLVKKMP---IRPNEVVLGSLLGSCYAHGK 436
V+E I ++ + +V G +EA L M I P+++V S+L +
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 437 LQLAEKIVRELVEMD-PLNTEYHILLSNMYALSGKVEKAN 475
L+ +++ ++ P + + L MY G +E AN
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDAN 485
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 147/307 (47%), Gaps = 9/307 (2%)
Query: 166 KFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVG 225
K G + EAR++F ++ +W ++ + +F P +N ++W +I G
Sbjct: 40 KSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISG 99
Query: 226 YVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWD 285
Y +G EAF L EM G + N TL SVL C+ + G +HG +K G+D
Sbjct: 100 YCKSGSKVEAFNLFWEMQSD-GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKT-GFD 157
Query: 286 LGVMVGTSLVDMYAKCGRISIALVVFKNMS-RRNVVAWNAVLGGLAMHGMGKAVVDMFPH 344
L V V L+ MYA+C RIS A +F+ M +N V W ++L G + +G ++ F
Sbjct: 158 LDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD 217
Query: 345 MVEE-VKPDAVTFMALLSACSHSGLVEQGRQ-YFRDLESVYEIRPEIEHYACMVDLLGRA 402
+ E + + TF ++L+AC+ G Q + ++S ++ ++ + ++D+ +
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ--SALIDMYAKC 275
Query: 403 GHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHI-LL 461
+E A L++ M + + V S++ C G + A + + E D ++ I +
Sbjct: 276 REMESARALLEGMEV-DDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSI 334
Query: 462 SNMYALS 468
N +ALS
Sbjct: 335 LNCFALS 341
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/362 (37%), Positives = 211/362 (58%), Gaps = 3/362 (0%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
N ++ Y++ G + EAR +F ++ V+SW VL+G +E+ VFD MPERN
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
+W +I GY NG E K MV N T+ VLSAC++ G G+WVH +
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 278 AVKAMGWD-LGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGK 336
+ +G++ + V V +L+DMY KCG I IA+ VFK + RR++++WN ++ GLA HG G
Sbjct: 214 G-ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 337 AVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACM 395
+++F M + PD VTF+ +L AC H GLVE G YF + + + I PEIEH C+
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCV 332
Query: 396 VDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNT 455
VDLL RAG L +A + KMP++ + V+ +LLG+ + K+ + E + EL++++P N
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNP 392
Query: 456 EYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTS 515
++LSN+Y +G+ + A + ++ G +K G+S I D L +F + + HPRT
Sbjct: 393 ANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTE 452
Query: 516 EI 517
E+
Sbjct: 453 EL 454
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 263/501 (52%), Gaps = 44/501 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDY----T 92
G+Q H V+ + + N+++ +Y+ C + +F + +D V + +
Sbjct: 337 GRQFHGF--VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVF--LSMRERDVVSWNTMIS 392
Query: 93 ALIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
A ++ E L L EM++ G ID L + +G Q H+ +++ G +
Sbjct: 393 AFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI-Q 451
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ + ++D+Y K GL+ ++K+F EG G
Sbjct: 452 FEGMNSYLIDMYSKSGLIRISQKLF---------------------EG--------SGYA 482
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
ER++ W MI GY NG T++ F + ++M+ N VT+ S+L ACSQ G V +G+
Sbjct: 483 ERDQATWNSMISGYTQNGHTEKTFLVFRKML-EQNIRPNAVTVASILPACSQIGSVDLGK 541
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HGF+++ D V V ++LVDMY+K G I A +F RN V + ++ G H
Sbjct: 542 QLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQH 600
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
GMG+ + +F M E +KPDA+TF+A+LSACS+SGL+++G + F ++ VY I+P EH
Sbjct: 601 GMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEH 660
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVL-GSLLGSCYAHGKLQLAEKIVRELVEM 450
Y C+ D+LGR G + EA VK + N L GSLLGSC HG+L+LAE + L +
Sbjct: 661 YCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKF 720
Query: 451 DPLN--TEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
D + Y +LLSNMYA K + + RR ++++G++K G S I + G ++ F + D
Sbjct: 721 DKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRD 780
Query: 509 KSHPRTSEIYLKLDDMICRLR 529
+ HP +SEIY +D + +R
Sbjct: 781 QEHPHSSEIYDVIDGLAKDMR 801
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 173/402 (43%), Gaps = 61/402 (15%)
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
+ES R VFD ERN W MI YV N E+ L E + + VT S
Sbjct: 267 IESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAAS 326
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
A S V +GR HGF K +L +++ SL+ MY++CG + + VF +M R+VV
Sbjct: 327 AVSALQQVELGRQFHGFVSKNFR-ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVV 385
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACS-----------HSGL 368
+WN ++ +G+ + + M ++ K D +T ALLSA S H+ L
Sbjct: 386 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL 445
Query: 369 VEQGRQY----------------FRDLESVYEIRPEIEH----YACMVDLLGRAGHLEEA 408
+ QG Q+ R + ++E E + M+ + GH E+
Sbjct: 446 IRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKT 505
Query: 409 ELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKI----VRELVEMDPLNTEYHILL 461
L+ +KM IRPN V + S+L +C G + L +++ +R+ ++ N L
Sbjct: 506 FLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQ---NVFVASAL 562
Query: 462 SNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKL 521
+MY+ +G ++ A K+R M Y Q G+ R ++L +
Sbjct: 563 VDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGY-----GQHGMGE----RAISLFLSM 613
Query: 522 DDMICRLRLAGYVPN--TTCQVLFGCSSSGDCTEALEEVEQV 561
+ +G P+ T VL CS SG E L+ E++
Sbjct: 614 QE-------SGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 52/329 (15%)
Query: 71 PSHARKLFDEIPQSHKDSVDYTALIR----RCPPLESLQLFIEMRQLG--LSIDXXXXXX 124
P AR+LFD IP+ +V + +I P E+L + M++ + D
Sbjct: 55 PQLARQLFDAIPK--PTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 125 XXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPS 184
+ G VH +++ V N++M++YV + P
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC------------LNAPD 160
Query: 185 VVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEA---FWLLKE 241
+ VV R VFD M +N VAW +I YV G EA F ++
Sbjct: 161 CFEYDVV-------------RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMR 207
Query: 242 MVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDL--GVMVGTSLVDMYA 299
M + + V+ +V A S S + +G +K +G + + V +S + MYA
Sbjct: 208 M----EVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLK-LGDEYVKDLFVVSSAISMYA 262
Query: 300 KCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV--EEVKPDAVTFM 357
+ G I + VF + RN+ WN ++G + +++F + +E+ D VT++
Sbjct: 263 ELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYL 322
Query: 358 ALLSACSHSGLVEQGRQY-------FRDL 379
SA S VE GRQ+ FR+L
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFREL 351
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 248/454 (54%), Gaps = 12/454 (2%)
Query: 49 LLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRC-----PPLES 103
L NL L + I + + + +A ++F I + + + + A+I+ C PPLES
Sbjct: 31 FLHGSNLLLAHFI-SICGSLSNSDYANRVFSHI--QNPNVLVFNAMIK-CYSLVGPPLES 86
Query: 104 LQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDL 163
L F M+ G+ D L D G VH +++ GF + ++ V++L
Sbjct: 87 LSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVEL 146
Query: 164 YVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMI 223
Y G +G+A+KVF E+ +VV W +++ G VE G +F M ER+ V+W MI
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 224 VGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMG 283
G +EA L EM+ GF+ + T+ +VL + G + G+W+H A +
Sbjct: 207 SSLSKCGRDREALELFCEMI-DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGL 265
Query: 284 WDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFP 343
+ + VG +LVD Y K G + A +F+ M RRNVV+WN ++ G A++G G+ +D+F
Sbjct: 266 FKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFD 325
Query: 344 HMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGR 401
M+EE V P+ TF+ +L+ CS++G VE+G + F + +++ EHY MVDL+ R
Sbjct: 326 AMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSR 385
Query: 402 AGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILL 461
+G + EA +K MP+ N + GSLL +C +HG ++LAE ELV+++P N+ ++LL
Sbjct: 386 SGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLL 445
Query: 462 SNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
SN+YA G+ + R ++KK +RK G S+I
Sbjct: 446 SNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 259/467 (55%), Gaps = 48/467 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GKQ+H + T G +++++N+++H Y C +A K+F E+P +D V +T +I
Sbjct: 125 GKQIHGIVTKMGFYD--DIYVQNSLVHFYGVCGESRNACKVFGEMPV--RDVVSWTGIIT 180
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R E+L F +M + + R+G ++G +H ++K
Sbjct: 181 GFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI 237
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
NA++D+YVK L +A +VFGE+E
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMRVFGELE------------------------------- 266
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
++++V+W MI G V +KEA L M G + + L SVLSAC+ G V GR
Sbjct: 267 KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGR 326
Query: 273 WVHGFAVKA-MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
WVH + + A + WD +GT++VDMYAKCG I AL +F + +NV WNA+LGGLA+
Sbjct: 327 WVHEYILTAGIKWD--THIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAI 384
Query: 332 HGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLES-VYEIRPEI 389
HG G + F MV+ KP+ VTF+A L+AC H+GLV++GR+YF ++S Y + P++
Sbjct: 385 HGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKL 444
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKL-QLAEKIVRELV 448
EHY CM+DLL RAG L+EA LVK MP++P+ + G++L +C G L +L ++I+ +
Sbjct: 445 EHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFL 504
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
+++ ++ ++LLSN++A + + + RR++K +GI KVPG S I
Sbjct: 505 DIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
GF + T V AC + + G+ +HG K MG+ + V SLV Y CG
Sbjct: 101 GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTK-MGFYDDIYVQNSLVHFYGVCGESRN 159
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHS 366
A VF M R+VV+W ++ G G+ K +D F M +V+P+ T++ +L +
Sbjct: 160 ACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM--DVEPNLATYVCVLVSSGRV 217
Query: 367 GLVEQGR 373
G + G+
Sbjct: 218 GCLSLGK 224
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 264/502 (52%), Gaps = 46/502 (9%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALP---SHARKLFDEIPQSHKDSVDYT-- 92
KQ+HA V GL+S NL + +++ A+ ++P +A KLFDEIP+ ++
Sbjct: 29 KQIHASMVVNGLMS--NLSVVGELIYS-ASLSVPGALKYAHKLFDEIPKPDVSICNHVLR 85
Query: 93 ALIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ P +++ L+ EM + G+S D +L + G H VV+ GF
Sbjct: 86 GSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVL 145
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V NA++ + G LG A ++F + V+W+ + G K ++ +FD MP
Sbjct: 146 NEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMP 205
Query: 213 ERNEVAWTVMIV-------------------------------GYVGNGFTKEAFWLLKE 241
+++VAW VMI GYV G+ KEA + KE
Sbjct: 206 YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKE 265
Query: 242 MVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGT----SLVDM 297
M G + VT+ S+LSAC+ GD+ G+ +H + ++ + VGT +L+DM
Sbjct: 266 MR-DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDM 324
Query: 298 YAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTF 356
YAKCG I A+ VF+ + R++ WN ++ GLA+H + ++MF M +V P+ VTF
Sbjct: 325 YAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTF 383
Query: 357 MALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP 416
+ ++ ACSHSG V++GR+YF + +Y I P I+HY CMVD+LGRAG LEEA + V+ M
Sbjct: 384 IGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Query: 417 IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANS 476
I PN +V +LLG+C +G ++L + +L+ M + ++LLSN+YA +G+ +
Sbjct: 444 IEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQK 503
Query: 477 FRRVLKKRGIRKVPGMSSIYVD 498
R++ ++K G+S I D
Sbjct: 504 VRKMFDDTRVKKPTGVSLIEED 525
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 261/499 (52%), Gaps = 54/499 (10%)
Query: 38 KQLHAVATVTGLLSSPNLF--LRNAILHVYAACALPSHARKLFD--EIPQSHKDSVDYTA 93
K H++ + GL + L A LH+ +A +FD EIP +S Y
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIP----NSFVYDT 83
Query: 94 LIRRCP----PLESLQLFIEM---RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVV 146
+IR C P L+ F+ M + ++ + +VG Q+H VV
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 147 KFG-FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGR 205
K G F + V V+ +YV+ LL +ARKVF EI
Sbjct: 144 KNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEI------------------------- 178
Query: 206 VVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQS 265
P+ + V W V++ GYV G E + +EM+ G E + ++ + L+AC+Q
Sbjct: 179 ------PQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVK-GLEPDEFSVTTALTACAQV 231
Query: 266 GDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAV 325
G + G+W+H F K + V VGT+LVDMYAKCG I A+ VFK ++RRNV +W A+
Sbjct: 232 GALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAAL 291
Query: 326 LGGLAMHGMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVY 383
+GG A +G K + + E +KPD+V + +L+AC+H G +E+GR ++E+ Y
Sbjct: 292 IGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARY 351
Query: 384 EIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKI 443
EI P+ EHY+C+VDL+ RAG L++A L++KMP++P V G+LL C H ++L E
Sbjct: 352 EITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELA 411
Query: 444 VRELVEMDPLNTEYH----ILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDG 499
V+ L++++ N E + LSN+Y + +A+ R ++++RG+RK PG S + VDG
Sbjct: 412 VKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDG 471
Query: 500 QLHQFSAGDKSHPRTSEIY 518
+ +F +GD SHP +I+
Sbjct: 472 NVTKFVSGDVSHPNLLQIH 490
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQ+H G+ S + ++ +L +Y L ARK+FDEIPQ D V + L+
Sbjct: 135 GKQIHCWVVKNGVFLSDS-HVQTGVLRIYVEDKLLLDARKVFDEIPQP--DVVKWDVLMN 191
Query: 97 ---RCP-PLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
RC E L++F EM GL D ++G G +H V K + +
Sbjct: 192 GYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIE 251
Query: 153 C-TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
V A++D+Y K G + A +VF + +
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFKK-------------------------------L 280
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
RN +W +I GY G+ K+A L+ + G + + V L VL+AC+ G + G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 272 RWVHGFAVKAMGWDLGVMVG----TSLVDMYAKCGRISIALVVFKNMSRRNVVA-WNAVL 326
R + ++ M + + +VD+ + GR+ AL + + M + + + W A+L
Sbjct: 341 RSM----LENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 396
Query: 327 GGLAMH 332
G H
Sbjct: 397 NGCRTH 402
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/507 (32%), Positives = 263/507 (51%), Gaps = 46/507 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKL-FDEIPQSHKDSVDYTALI 95
G +H V G+ S L++ NA++++YA C++ A L F +I K+ V +T LI
Sbjct: 130 GALVHGVVVKLGMEGS--LYVDNAMMNMYATCSVTMEAACLIFRDIKV--KNDVTWTTLI 185
Query: 96 RRCPPLES----LQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
L L+++ +M + + G Q+H+ V+K GF
Sbjct: 186 TGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQ 245
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
V N+++DLY + G L EA+ F E+E +++W ++ +
Sbjct: 246 SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL---------------- 289
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
ER++ + EA + + GF NC T S+++AC+ + G
Sbjct: 290 -ERSD---------------SSEALLMFQRFE-SQGFVPNCYTFTSLVAACANIAALNCG 332
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNM-SRRNVVAWNAVLGGLA 330
+ +HG + G++ V + +L+DMYAKCG I + VF + RRN+V+W +++ G
Sbjct: 333 QQLHGRIFRR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Query: 331 MHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI 389
HG G V++F MV ++PD + FMA+LSAC H+GLVE+G +YF +ES Y I P+
Sbjct: 392 SHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDR 451
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKI-VRELV 448
+ Y C+VDLLGRAG + EA LV++MP +P+E G++LG+C AH L ++ R+++
Sbjct: 452 DIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVM 511
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
E+ P +++LS +YA GK R++++ G +K GMS I V+ Q+ F+ D
Sbjct: 512 ELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Query: 509 KSHPRTSEIYLKLDDMICRLRLAGYVP 535
K P S +Y L +I R AGYVP
Sbjct: 572 KMCPNASSVYSVLGLLIEETREAGYVP 598
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
VE R +FD MP+R+ VAWT MI GY + + A+ EMV G N TL SVL
Sbjct: 61 VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV-KQGTSPNEFTLSSVLK 119
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCG-RISIALVVFKNMSRRNV 319
+C + G VHG VK +G + + V ++++MYA C + A ++F+++ +N
Sbjct: 120 SCRNMKVLAYGALVHGVVVK-LGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKND 178
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMV---EEVKPDAVTFMALLSACSHSGLVEQGRQYF 376
V W ++ G G G + M+ M+ EV P +T SA S V G+Q
Sbjct: 179 VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS--VTTGKQIH 236
Query: 377 -----RDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM 415
R +S + I +DL R G+L EA+ +M
Sbjct: 237 ASVIKRGFQSNLPVMNSI------LDLYCRCGYLSEAKHYFHEM 274
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 260/541 (48%), Gaps = 58/541 (10%)
Query: 136 NVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDG- 194
N G +VHS VK GF V N+++D+Y K G L +ARKVF ++ V +W ++ G
Sbjct: 369 NQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGY 428
Query: 195 ------------------------VVKWEGVESG---------------RVVFDGMPERN 215
++ W + SG R+ DG +RN
Sbjct: 429 CQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRN 488
Query: 216 EVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVH 275
W ++I GY+ NG EA L ++M F F N VT+ S+L AC+ + R +H
Sbjct: 489 TATWNLIIAGYIQNGKKDEALELFRKMQFS-RFMPNSVTILSLLPACANLLGAKMVREIH 547
Query: 276 GFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMG 335
G ++ D V +L D YAK G I + +F M ++++ WN+++GG +HG
Sbjct: 548 GCVLRR-NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSY 606
Query: 336 KAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYAC 394
+ +F M + + P+ T +++ A G V++G++ F + + Y I P +EH +
Sbjct: 607 GPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSA 666
Query: 395 MVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLN 454
MV L GRA LEEA +++M I+ + S L C HG + +A L ++P N
Sbjct: 667 MVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPEN 726
Query: 455 TEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRT 514
T ++S +YAL K+ ++ + + ++K G S I V +H F+ GD+S T
Sbjct: 727 TATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCT 786
Query: 515 SEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFG 574
+Y ++ M + N + Q +G+ E E+ HSEK A+ FG
Sbjct: 787 DVLYPLVEKM-------SRLDNRSDQY------NGELWIEEEGREETCGIHSEKFAMAFG 833
Query: 575 LISTS--SGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDY 632
LIS+S S + + I KNLR+C+DCH K S Y +I++ D H FK G CSC DY
Sbjct: 834 LISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDY 893
Query: 633 W 633
W
Sbjct: 894 W 894
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 224/489 (45%), Gaps = 65/489 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ LHA GL + P++F+ +L +YA C + ARK+FD + + ++ ++A+I
Sbjct: 100 GRILHARF---GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRE--RNLFTWSAMIG 154
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R E +LF M + G+ D GD G +HS V+K G
Sbjct: 155 AYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSS 214
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGV---------------VK 197
C RV N+++ +Y K G L A K F + V++W VL ++
Sbjct: 215 CLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME 274
Query: 198 WEGVESGRVVFD----------------GMPERNEV--------AWTVMIVGYVGNGFTK 233
EG+ G V ++ + ++ E WT MI G + NG
Sbjct: 275 KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRY 334
Query: 234 EAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTS 293
+A + ++M F G N VT+ S +SACS + G VH AVK MG+ V+VG S
Sbjct: 335 QALDMFRKM-FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK-MGFIDDVLVGNS 392
Query: 294 LVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPD 352
LVDMY+KCG++ A VF ++ ++V WN+++ G G ++F M + ++P+
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 353 AVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLV 412
+T+ ++S +G + F+ +E +++ + ++ + G +EA L
Sbjct: 453 IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELF 512
Query: 413 KKMPIR---PNEVVLGSLLGSCYAHGKLQLAEKIVREL------VEMDPLNTEYHILLSN 463
+KM PN V + SLL +C L K+VRE+ +D ++ + L++
Sbjct: 513 RKMQFSRFMPNSVTILSLLPACAN----LLGAKMVREIHGCVLRRNLDAIHAVKNA-LTD 567
Query: 464 MYALSGKVE 472
YA SG +E
Sbjct: 568 TYAKSGDIE 576
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 164/382 (42%), Gaps = 26/382 (6%)
Query: 163 LYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVM 222
L+ +FGL E P V T +L K + R VFD M ERN W+ M
Sbjct: 103 LHARFGLFTE----------PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAM 152
Query: 223 IVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAM 282
I Y +E L + M+ G + +L C+ GDV G+ +H +K +
Sbjct: 153 IGAYSRENRWREVAKLFRLMMKD-GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK-L 210
Query: 283 GWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMF 342
G + V S++ +YAKCG + A F+ M R+V+AWN+VL +G + V++
Sbjct: 211 GMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELV 270
Query: 343 PHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGR 401
M +E + P VT+ L+ + G + + +E+ + I ++ + M+ L
Sbjct: 271 KEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIH 329
Query: 402 AGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYH 458
G +A + +KM + PN V + S + +C + ++ V+M ++
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID---D 386
Query: 459 ILLSN----MYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRT 514
+L+ N MY+ GK+E A +K + + M + Y Q + R
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYC--QAGYCGKAYELFTRM 444
Query: 515 SEIYLKLDDMICRLRLAGYVPN 536
+ L+ + + ++GY+ N
Sbjct: 445 QDANLRPNIITWNTMISGYIKN 466
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 253/479 (52%), Gaps = 12/479 (2%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIE 109
NL+ N ++ Y + AR +FD +P+ +D V + ++ + E+L + E
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPE--RDVVSWNTMVIGYAQDGNLHEALWFYKE 169
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
R+ G+ + + + Q H V+ GF + +++D Y K G
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ A++ F E+ V + WT ++ G K +E+ +F MPE+N V+WT +I GYV
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQ 289
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVM 289
G A L ++M+ G + T S L A + + G+ +HG+ ++ +
Sbjct: 290 GSGNRALDLFRKMI-ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAI 347
Query: 290 VGTSLVDMYAKCGRISIALVVFKNMS-RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE- 347
V +SL+DMY+K G + + VF+ + + V WN ++ LA HG+G + M M++
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 348 EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEE 407
V+P+ T + +L+ACSHSGLVE+G ++F + + I P+ EHYAC++DLLGRAG +E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 408 AELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYAL 467
+++MP P++ + ++LG C HG +L +K EL+++DP ++ +ILLS++YA
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 468 SGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS--HPRTSEIYLKLDDM 524
GK E R V+KKR + K +S I ++ ++ F+ D S H R EIY L ++
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 160/312 (51%), Gaps = 10/312 (3%)
Query: 138 GPQVHSGVVKFGFGK-CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVV 196
G +H + GF + T + N ++ +Y+K G +A KVF ++ + ++ SW ++ G V
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 197 KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
K + RVVFD MPER+ V+W M++GY +G EA W KE G + N +
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFA 183
Query: 257 SVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR 316
+L+AC +S + + R HG + A G+ V++ S++D YAKCG++ A F M+
Sbjct: 184 GLLTACVKSRQLQLNRQAHGQVLVA-GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYF 376
+++ W ++ G A G +A +F M E+ + V++ AL++ G + F
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK---NPVSWTALIAGYVRQGSGNRALDLF 299
Query: 377 RDLESVYEIRPEIEHYA---CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYA 433
R + ++ ++PE ++ C + H +E + + +RPN +V+ SL+
Sbjct: 300 RKMIAL-GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Query: 434 HGKLQLAEKIVR 445
G L+ +E++ R
Sbjct: 359 SGSLEASERVFR 370
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 159/494 (32%), Positives = 254/494 (51%), Gaps = 42/494 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GKQ+H ++ GL +L ++++ +Y+ C + ARK+F +P+ V ALI
Sbjct: 548 GKQVHCLSVKCGL--DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW--SVVSMNALIA 603
Query: 96 --RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
+ E++ LF EM G++ + +G Q H + K GF
Sbjct: 604 GYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 154 TRVCN-AVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+++ +Y+ + EA +F E+ P +
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSSPKSI-------------------------- 697
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
V WT M+ G+ NGF +EA KEM G + T +VL CS + GR
Sbjct: 698 ----VLWTGMMSGHSQNGFYEEALKFYKEMRHD-GVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR-NVVAWNAVLGGLAM 331
+H + + DL + +L+DMYAKCG + + VF M RR NVV+WN+++ G A
Sbjct: 753 AIHSL-IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 332 HGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+G + + +F M + + PD +TF+ +L+ACSH+G V GR+ F + Y I ++
Sbjct: 812 NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
H ACMVDLLGR G+L+EA+ ++ ++P+ + SLLG+C HG E +L+E+
Sbjct: 872 HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIEL 931
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
+P N+ ++LLSN+YA G EKAN+ R+V++ RG++KVPG S I V+ + H F+AGDKS
Sbjct: 932 EPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKS 991
Query: 511 HPRTSEIYLKLDDM 524
H +I + L+D+
Sbjct: 992 HSEIGKIEMFLEDL 1005
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 201/437 (45%), Gaps = 55/437 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GK +H+ + + G+ S L NAI+ +YA CA S+A K FD + KD + +++
Sbjct: 79 GKAVHSKSLILGIDSEGRL--GNAIVDLYAKCAQVSYAEKQFDFL---EKDVTAWNSMLS 133
Query: 97 RCP----PLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
P + L+ F+ + + + + R + G Q+H ++K G +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKW-------------- 198
+ A++D+Y K + +AR+VF I P+ V WT + G VK
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 199 -EG--------------------VESGRVVFDGMPERNEVAWTVMIVGYVGNG---FTKE 234
EG ++ R++F M + VAW VMI G+ G E
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
F+ +++ + TL SVLSA ++ +G VH A+K +G + VG+SL
Sbjct: 314 YFFNMRK----SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK-LGLASNIYVGSSL 368
Query: 295 VDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDA 353
V MY+KC ++ A VF+ + +N V WNA++ G A +G V+++F M D
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 354 VTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVK 413
TF +LLS C+ S +E G Q F + ++ + +VD+ + G LE+A + +
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Query: 414 KMPIRPNEVVLGSLLGS 430
+M R N V +++GS
Sbjct: 488 RMCDRDN-VTWNTIIGS 503
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 193/482 (40%), Gaps = 84/482 (17%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEI--PQSHKDSVDYTAL 94
G+Q+H GL N + A++ +YA C S AR++F+ I P + + ++
Sbjct: 179 GRQIHCSMIKMGL--ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGY 236
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLG-------------DPNVGPQV 141
++ P E++ +F MR G D RLG P+V V
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDV---V 293
Query: 142 HSGVVKFGFGKCTRVCNAVMDLYV-------------KFGLLGEARKVFGEIEVPSVVSW 188
V+ G GK R C V Y G + A + +++ VV
Sbjct: 294 AWNVMISGHGK--RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHA 351
Query: 189 TVVLDGVV--------------KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
+ G+ K E +E+ VF+ + E+N+V W MI GY NG + +
Sbjct: 352 EAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHK 411
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
L +M G+ ++ T S+LS C+ S D+ +G H +K + VG +L
Sbjct: 412 VMELFMDMK-SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNAL 469
Query: 295 VDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDA 353
VDMYAKCG + A +F+ M R+ V WN ++G D+F M + + D
Sbjct: 470 VDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Query: 354 VTFMALLSACSHSGLVEQGRQ----------------------------YFRDLESVYEI 385
+ L AC+H + QG+Q +D V+
Sbjct: 530 ACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Query: 386 RPEIEHYACMVDLLGRA-GHLEEAELLVKKMPIR---PNEVVLGSLLGSCYAHGKLQLAE 441
PE + + G + +LEEA +L ++M R P+E+ +++ +C+ L L
Sbjct: 590 LPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGT 649
Query: 442 KI 443
+
Sbjct: 650 QF 651
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 178/415 (42%), Gaps = 48/415 (11%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G Q H++ L + NLF+ NA++ +YA C AR++F+ + +D+V + +I
Sbjct: 447 GSQFHSIIIKKKL--AKNLFVGNALVDMYAKCGALEDARQIFERMCD--RDNVTWNTIIG 502
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ E+ LF M G+ D + G QVH VK G +
Sbjct: 503 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
++++D+Y K G++ +ARKVF +P
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFS-------------------------------SLP 591
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
E + V+ +I GY N +EA L +EM+ G + +T +++ AC + + +G
Sbjct: 592 EWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTR-GVNPSEITFATIVEACHKPESLTLGT 649
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR-RNVVAWNAVLGGLAM 331
HG K G +G SL+ MY ++ A +F +S +++V W ++ G +
Sbjct: 650 QFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQ 709
Query: 332 HGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+G + + + M + V PD TF+ +L CS + +GR ++ + +++
Sbjct: 710 NGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH---SLIFHLAHDLD 766
Query: 391 HYA--CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKI 443
++D+ + G ++ + + +M R N V SL+ +G + A KI
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKI 821
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/502 (31%), Positives = 255/502 (50%), Gaps = 45/502 (8%)
Query: 59 NAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR---RCPPLES-LQLFIEMRQLG 114
++++H Y AR LFD + + ++ + +TA+I + E LF+ MRQ G
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTE--RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG 269
Query: 115 -LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEA 173
+ ++ G Q+H V + + N++M +Y K G +GEA
Sbjct: 270 DVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEA 329
Query: 174 RKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP--------------------- 212
+ VFG ++ VSW ++ G+V+ + + +F+ MP
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEIS 389
Query: 213 ----------ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFG--CGFELNCVTLCSVLS 260
E++ + WT MI +V NG+ +EA +M+ C N T SVLS
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCP---NSYTFSSVLS 446
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
A + D+ G +HG VK M + V SLV MY KCG + A +F +S N+V
Sbjct: 447 ATASLADLIEGLQIHGRVVK-MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIV 505
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHMVEEVK-PDAVTFMALLSACSHSGLVEQGRQYFRDL 379
++N ++ G + +G GK + +F + K P+ VTF+ALLSAC H G V+ G +YF+ +
Sbjct: 506 SYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Query: 380 ESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQL 439
+S Y I P +HYACMVDLLGR+G L++A L+ MP +P+ V GSLL + H ++ L
Sbjct: 566 KSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDL 625
Query: 440 AEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDG 499
AE ++L+E++P + +++LS +Y++ GK + + K + I+K PG S I + G
Sbjct: 626 AELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKG 685
Query: 500 QLHQFSAGDKSHPRTSEIYLKL 521
++H F AGD+S EI L
Sbjct: 686 EVHNFLAGDESQLNLEEIGFTL 707
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 180/404 (44%), Gaps = 27/404 (6%)
Query: 60 AILHVYAACALPSHARKLFDEIPQSHKDSVD--YTALIR-RCPPLESLQLFIEMRQLGLS 116
A++ YA S A ++FDE+P S + TA+I+ +C ++ +LF ++ +
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEK--- 142
Query: 117 IDXXXXXXXXXXXXRLGDPNVGPQVHSGV-VKFGFGKCTRVCNAVMDLYVKFGLLGEARK 175
+ R G + +++ VKF + + N ++ Y++ G EA +
Sbjct: 143 -NAVSYATMITGFVRAGRFDEAEFLYAETPVKF---RDSVASNVLLSGYLRAGKWNEAVR 198
Query: 176 VFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEA 235
VF + V VVS + ++ G K + R +FD M ERN + WT MI GY GF ++
Sbjct: 199 VFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDG 258
Query: 236 FWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLV 295
F L M ++N TL + AC G +HG V M + + +G SL+
Sbjct: 259 FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL-VSRMPLEFDLFLGNSLM 317
Query: 296 DMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVT 355
MY+K G + A VF M ++ V+WN+++ GL ++F M + D V+
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK---DMVS 374
Query: 356 FMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH--YACMVDLLGRAGHLEEAELLVK 413
+ ++ S G + + + F + PE ++ + M+ G+ EEA
Sbjct: 375 WTDMIKGFSGKGEISKCVELF-------GMMPEKDNITWTAMISAFVSNGYYEEALCWFH 427
Query: 414 KM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLN 454
KM + PN S+L + + L +I +V+M+ +N
Sbjct: 428 KMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN 471
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 102/258 (39%), Gaps = 54/258 (20%)
Query: 157 CNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM----- 211
CN+ + + + G L EA +F ++ S+VSW ++ + + VFD M
Sbjct: 53 CNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVT 112
Query: 212 ---------------------------PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVF 244
PE+N V++ MI G+V G EA +L E
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAET-- 170
Query: 245 GCGFELNCVTLCSVLSACSQSGDVCVGRW------VHGFAVKAMGWDLGVMVGTSLVDMY 298
F SV S SG + G+W G AVK V+ +S+V Y
Sbjct: 171 PVKFR------DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE------VVSCSSMVHGY 218
Query: 299 AKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE--VKPDAVTF 356
K GRI A +F M+ RNV+ W A++ G G + +F M +E VK ++ T
Sbjct: 219 CKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTL 278
Query: 357 MALLSACSHSGLVEQGRQ 374
+ AC +G Q
Sbjct: 279 AVMFKACRDFVRYREGSQ 296
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/498 (29%), Positives = 270/498 (54%), Gaps = 40/498 (8%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRR 97
KQ+HA GL + + NA++ YA C S A+++FD + S KD + + ++I
Sbjct: 223 KQVHAKVLKLGL--QHEITICNAMISSYADCGSVSDAKRVFDGLGGS-KDLISWNSMIAG 279
Query: 98 CPPLE----SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
E + +LFI+M++ + D G +H V+K G +
Sbjct: 280 FSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQV 339
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
T NA++ +Y++F P+ +E +F+ +
Sbjct: 340 TSATNALISMYIQF---------------PTGT--------------MEDALSLFESLKS 370
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
++ ++W +I G+ G +++A + +++ ++L +CS + +G+
Sbjct: 371 KDLISWNSIITGFAQKGLSEDAVKFFSYLR-SSEIKVDDYAFSALLRSCSDLATLQLGQQ 429
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS-RRNVVAWNAVLGGLAMH 332
+H A K+ G+ V +SL+ MY+KCG I A F+ +S + + VAWNA++ G A H
Sbjct: 430 IHALATKS-GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G+G+ +D+F M + VK D VTF A+L+ACSH+GL+++G + +E VY+I+P +EH
Sbjct: 489 GLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEH 548
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
YA VDLLGRAG + +A+ L++ MP+ P+ +VL + LG C A G++++A ++ L+E++
Sbjct: 549 YAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIE 608
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P + ++ LS+MY+ K E+ S ++++K+RG++KVPG S I + Q+ F+A D+S+
Sbjct: 609 PEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSN 668
Query: 512 PRTSEIYLKLDDMICRLR 529
P +IY+ + D+ ++
Sbjct: 669 PLCQDIYMMIKDLTQEMQ 686
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/559 (22%), Positives = 225/559 (40%), Gaps = 93/559 (16%)
Query: 41 HAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR---R 97
H A G +S ++++ N IL Y +A LFDE+P+ +DSV + +I
Sbjct: 23 HCYAIKCGSIS--DIYVSNRILDSYIKFGFLGYANMLFDEMPK--RDSVSWNTMISGYTS 78
Query: 98 CPPLESLQ-LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRV 156
C LE LF M++ G +D + ++G QVH V+K G+ V
Sbjct: 79 CGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYV 138
Query: 157 CNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNE 216
++++D+Y K + +A + F EI P+ VSW ++ G V+ +
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDI--------------- 183
Query: 217 VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHG 276
K AFWLL M ++ T +L+ + + VH
Sbjct: 184 ----------------KTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHA 227
Query: 277 FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNM-SRRNVVAWNAVLGGLAMHGMG 335
+K +G + + +++ YA CG +S A VF + +++++WN+++ G + H +
Sbjct: 228 KVLK-LGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELK 286
Query: 336 KAVVDMFPHMVEE-VKPDAVTFMALLSACS-----------HSGLVEQGRQY-------- 375
++ ++F M V+ D T+ LLSACS H ++++G +
Sbjct: 287 ESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNAL 346
Query: 376 -----------FRDLESVYEI--RPEIEHYACMVDLLGRAGHLEEAELL---VKKMPIRP 419
D S++E ++ + ++ + G E+A ++ I+
Sbjct: 347 ISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKV 406
Query: 420 NEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHI-LLSNMYALSGKVEKANS-F 477
++ +LL SC LQL ++I + ++ E+ I L MY+ G +E A F
Sbjct: 407 DDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCF 466
Query: 478 RRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNT 537
+++ K M Y L Q S S + KLD + T
Sbjct: 467 QQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV--KLDHV------------T 512
Query: 538 TCQVLFGCSSSGDCTEALE 556
+L CS +G E LE
Sbjct: 513 FTAILTACSHTGLIQEGLE 531
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 158/351 (45%), Gaps = 54/351 (15%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+Q+H + G N+++ ++++ +YA C A + F EI S +SV + ALI
Sbjct: 120 GEQVHGLVIKGGY--ECNVYVGSSLVDMYAKCERVEDAFEAFKEI--SEPNSVSWNALIA 175
Query: 97 RCPPLESLQL------FIEMRQLGLSIDXXXXXXXXXXXXRLGDP---NVGPQVHSGVVK 147
+ ++ +EM+ +++D L DP N+ QVH+ V+K
Sbjct: 176 GFVQVRDIKTAFWLLGLMEMKA-AVTMDAGTFAPLLTL---LDDPMFCNLLKQVHAKVLK 231
Query: 148 FGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVV 207
G +CNA++ Y G + +A++V
Sbjct: 232 LGLQHEITICNAMISSYADCGSVSDAKRV------------------------------- 260
Query: 208 FDGM-PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
FDG+ ++ ++W MI G+ + + AF L +M E + T +LSACS
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW-VETDIYTYTGLLSACSGEE 319
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAK--CGRISIALVVFKNMSRRNVVAWNA 324
G+ +HG +K G + +L+ MY + G + AL +F+++ +++++WN+
Sbjct: 320 HQIFGKSLHGMVIKK-GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 325 VLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQ 374
++ G A G+ + V F ++ E+K D F ALL +CS ++ G+Q
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ 429
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 141 VHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEG 200
H +K G V N ++D Y+KFG LG A
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYAN-------------------------- 55
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
++FD MP+R+ V+W MI GY G ++A W L + G +++ + +L
Sbjct: 56 -----MLFDEMPKRDSVSWNTMISGYTSCGKLEDA-WCLFTCMKRSGSDVDGYSFSRLLK 109
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
+ +G VHG +K G++ V VG+SLVDMYAKC R+ A FK +S N V
Sbjct: 110 GIASVKRFDLGEQVHGLVIKG-GYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSV 168
Query: 321 AWNAVLGGLAMHGMGKAVVDMFP--HMVEEVKPDAVTFMALLS 361
+WNA++ G K + M V DA TF LL+
Sbjct: 169 SWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 244/463 (52%), Gaps = 14/463 (3%)
Query: 70 LPSHARKLFDEIPQSHKDSVDYTALIRR----CPPLESLQLFIEMRQLGLSIDXXXXXXX 125
L +A K+FDEIP+ D + TA+I R +E+ Q F + LG+ +
Sbjct: 42 LIRNAHKVFDEIPE--LDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTV 99
Query: 126 XXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSV 185
D +G Q+H +K G V +AV++ YVK L +AR+ F + P+V
Sbjct: 100 IGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 186 VSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFG 245
VS T ++ G +K E +F MPER+ V W +I G+ G +EA +M+
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLRE 219
Query: 246 CGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRIS 305
N T ++A S G+ +H A+K +G V V SL+ Y+KCG +
Sbjct: 220 GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNME 279
Query: 306 IALVVFKNMS--RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE--VKPDAVTFMALLS 361
+L+ F + +RN+V+WN+++ G A +G G+ V MF MV++ ++P+ VT + +L
Sbjct: 280 DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLF 339
Query: 362 ACSHSGLVEQGRQYFRDLESVYEIRP---EIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
AC+H+GL+++G YF + Y+ P E+EHYACMVD+L R+G +EAE L+K MP+
Sbjct: 340 ACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 419 PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFR 478
P +LLG C H +LA+ +++E+DP + +++LSN Y+ + + R
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIR 458
Query: 479 RVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKL 521
R +K+ G+++ G S I V Q+ F DK++ E+Y L
Sbjct: 459 RKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 159/400 (39%), Gaps = 115/400 (28%)
Query: 154 TRVCNAVMDL--YVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
T+ N++ +L ++ L+ A KVF EI V+S T V+ VK ES V
Sbjct: 25 TKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVK----ESRHV----- 75
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
E ++ ++ +G N FT FG +V+ + + S DV +G
Sbjct: 76 -EASQAFKRLLCLGIRPNEFT-----------FG-----------TVIGSSTTSRDVKLG 112
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI------------------------- 306
+ +H +A+K MG V VG+++++ Y K ++
Sbjct: 113 KQLHCYALK-MGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLK 171
Query: 307 ------ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE--VKPDAVTF-- 356
AL +F+ M R+VV WNAV+GG + G + V+ F M+ E V P+ TF
Sbjct: 172 KHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPC 231
Query: 357 ----------------------------------MALLSACSHSGLVEQGRQYFRDLESV 382
+L+S S G +E F LE
Sbjct: 232 AITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLE-- 289
Query: 383 YEIRPEIEHYACMVDLLGRAGHLEEA----ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ 438
E + I + M+ G EEA E +VK +RPN V + +L +C G +Q
Sbjct: 290 -EEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQ 348
Query: 439 LA----EKIVRELVEMDPLNTEYHILLSNMYALSGKVEKA 474
K V + + + L E++ + +M + SG+ ++A
Sbjct: 349 EGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEA 388
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 257/499 (51%), Gaps = 54/499 (10%)
Query: 38 KQLHAVATVTGLLSSPNLF--LRNAILHVYAACALPSHARKLFD--EIPQSHKDSVDYTA 93
K H++ + GL + L A LH+ +A +FD EIP +S Y
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIP----NSFVYDT 83
Query: 94 LIRRCP----PLESLQLFIEM---RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVV 146
+IR C P L+ F+ M + ++ + +VG Q+H VV
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 147 KFG-FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGR 205
K G F V V+ +YV+ LL +ARKVF EI
Sbjct: 144 KNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEI------------------------- 178
Query: 206 VVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQS 265
P+ + V W V++ GYV G E + KEM+ G E + ++ + L+AC+Q
Sbjct: 179 ------PQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVR-GIEPDEFSVTTALTACAQV 231
Query: 266 GDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAV 325
G + G+W+H F K + V VGT+LVDMYAKCG I A+ VF+ ++RRNV +W A+
Sbjct: 232 GALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAAL 291
Query: 326 LGGLAMHGMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVY 383
+GG A +G K + E +KPD+V + +L+AC+H G +E+GR ++E+ Y
Sbjct: 292 IGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARY 351
Query: 384 EIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKI 443
I P+ EHY+C+VDL+ RAG L++A L++KMP++P V G+LL C H ++L E
Sbjct: 352 GITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELA 411
Query: 444 VRELVEMDPLNTEYH----ILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDG 499
V+ L++++ N E + LSN+Y + +A R ++++RGIRK PG S + VDG
Sbjct: 412 VQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDG 471
Query: 500 QLHQFSAGDKSHPRTSEIY 518
+ +F +GD SHP +I+
Sbjct: 472 IVTKFVSGDVSHPNLLQIH 490
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 127/306 (41%), Gaps = 48/306 (15%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQ+H G+ S ++ +L +Y L ARK+FDEIPQ D V + L+
Sbjct: 135 GKQIHCWVVKNGVFLSDG-HVQTGVLRIYVEDKLLFDARKVFDEIPQP--DVVKWDVLMN 191
Query: 97 ---RCP-PLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
RC E L++F EM G+ D ++G G +H V K + +
Sbjct: 192 GYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE 251
Query: 153 C-TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
V A++D+Y K G + A +VF + +
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVF-------------------------------EKL 280
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
RN +W +I GY G+ K+A L + G + + V L VL+AC+ G + G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 272 RWVHGFAVKAMGWDLGVMVG----TSLVDMYAKCGRISIALVVFKNMSRRNVVA-WNAVL 326
R + ++ M G+ + +VD+ + GR+ AL + + M + + + W A+L
Sbjct: 341 RTM----LENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
Query: 327 GGLAMH 332
G H
Sbjct: 397 NGCRTH 402
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 184/673 (27%), Positives = 321/673 (47%), Gaps = 110/673 (16%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK +H+ V G+ N+ L+ +++ Y+ + A ++ + +D +T+++
Sbjct: 243 GKTIHSNIIVRGI--PLNVVLKTSLVDFYSQFSKMEDAVRVLN--SSGEQDVFLWTSVVS 298
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG--- 149
R E++ F+EMR LGL + + + G Q+HS +K G
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 150 -----------FGKCT-------RVCNAVMDLYVK------------------FGLLGEA 173
+ KC+ RV A++ V FGLL E
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Query: 174 RKVFGEIEVPSVVSWTVVL-----------------------------------DGVVKW 198
K E+E P+VV+ + VL D
Sbjct: 419 VK--REVE-PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASS 475
Query: 199 EGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSV 258
V+ V M R+ + +T ++ + G + A ++ M +G G ++ ++L
Sbjct: 476 RKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM-YGDGIRMDQLSLPGF 534
Query: 259 LSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRN 318
+SA + G + G+ +H ++VK+ G+ V SLVDMY+KCG + A VF+ ++ +
Sbjct: 535 ISASANLGALETGKHLHCYSVKS-GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPD 593
Query: 319 VVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFR 377
VV+WN ++ GLA +G + + F M ++E +PD+VTF+ LLSACS+ L + G +YF+
Sbjct: 594 VVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQ 653
Query: 378 DLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKL 437
++ +Y I P++EHY +V +LGRAG LEEA +V+ M ++PN ++ +LL +C G L
Sbjct: 654 VMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNL 713
Query: 438 QLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV 497
L E + + + + P + +ILL+++Y SGK E A R ++ ++ + K G S++ V
Sbjct: 714 SLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEV 773
Query: 498 DGQLHQFSAGDKSH-PRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALE 556
G++H F + D + +T+ IY +++ + ++ FG G+
Sbjct: 774 QGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIK------------RFGSPYRGN------ 815
Query: 557 EVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASNIYKREIVVRDR 616
E F HS K A+ +G I S +P+++ KN +C+DCH + I + + ++I VRD
Sbjct: 816 --ENASF-HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDG 872
Query: 617 YRFHSFKQGSCSC 629
+ H FK G CSC
Sbjct: 873 NQVHIFKNGECSC 885
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 209/502 (41%), Gaps = 97/502 (19%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G +H GLL NL L N +L +Y +ARKLFDE+ SH+ +T +I
Sbjct: 42 GLHIHCPVIKFGLL--ENLDLCNNLLSLYLKTDGIWNARKLFDEM--SHRTVFAWTVMIS 97
Query: 97 RCPPLE----SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ +L LF EM G + L D + G +VH V+K GF
Sbjct: 98 AFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEG 157
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVV---KWE---------- 199
+ V +++ DLY K G EA ++F ++ +SWT+++ +V KW
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMV 217
Query: 200 ---------------------GVESGR-----VVFDGMP--------------------- 212
G+E G+ ++ G+P
Sbjct: 218 KAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 213 ---------ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACS 263
E++ WT ++ G+V N KEA EM G + N T ++LS CS
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR-SLGLQPNNFTYSAILSLCS 336
Query: 264 QSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI-ALVVFKNMSRRNVVAW 322
+ G+ +H +K +G++ VG +LVDMY KC + A VF M NVV+W
Sbjct: 337 AVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSW 395
Query: 323 NAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLE- 380
++ GL HG + + MV+ EV+P+ VT +L ACS + R R LE
Sbjct: 396 TTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS------KLRHVRRVLEI 449
Query: 381 SVYEIRPEIEHYA----CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGK 436
Y +R ++ +VD + ++ A +++ M R N + SL+ GK
Sbjct: 450 HAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDN-ITYTSLVTRFNELGK 508
Query: 437 LQLAEKIVREL----VEMDPLN 454
++A ++ + + MD L+
Sbjct: 509 HEMALSVINYMYGDGIRMDQLS 530
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 36/273 (13%)
Query: 137 VGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVV 196
+G +H V+KFG + +CN ++ LY+K + ARK+F E+ +V +WTV++
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 197 KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
K + S +F+ M G N T
Sbjct: 101 KSQEFASALSLFEEM--------------------------------MASGTHPNEFTFS 128
Query: 257 SVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR 316
SV+ +C+ D+ G VHG +K G++ +VG+SL D+Y+KCG+ A +F ++
Sbjct: 129 SVVRSCAGLRDISYGGRVHGSVIKT-GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN 187
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQY 375
+ ++W ++ L + + + MV+ V P+ TF+ LL A S GL E G+
Sbjct: 188 ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTI 246
Query: 376 FRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
++ V I + +VD + +E+A
Sbjct: 247 HSNI-IVRGIPLNVVLKTSLVDFYSQFSKMEDA 278
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 151/491 (30%), Positives = 270/491 (54%), Gaps = 24/491 (4%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G Q++ +A + L S ++ + NA + +Y C + A ++FDE+ + +D+V + A+I
Sbjct: 401 GLQIYGLAIKSSL--SLDVCVANAAIDMYGKCQALAEAFRVFDEMRR--RDAVSWNAIIA 456
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ E+L LF+ M + + D G G ++HS +VK G
Sbjct: 457 AHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMAS 515
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ V +++D+Y K G++ EA K+ + VS T+ + E + + R+
Sbjct: 516 NSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTME-----ELEKMHNKRL------ 564
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+ V+W +I GYV +++A L M+ G + T +VL C+ +G+
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMM-EMGITPDKFTYATVLDTCANLASAGLGK 623
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H +K V + ++LVDMY+KCG + + ++F+ RR+ V WNA++ G A H
Sbjct: 624 QIHAQVIKK-ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682
Query: 333 GMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G G+ + +F M+ E +KP+ VTF+++L AC+H GL+++G +YF ++ Y + P++ H
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPH 742
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAH-GKLQLAEKIVRELVEM 450
Y+ MVD+LG++G ++ A L+++MP ++V+ +LLG C H +++AE+ L+ +
Sbjct: 743 YSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRL 802
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
DP ++ + LLSN+YA +G EK + RR ++ ++K PG S + + +LH F GDK+
Sbjct: 803 DPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKA 862
Query: 511 HPRTSEIYLKL 521
HPR EIY +L
Sbjct: 863 HPRWEEIYEEL 873
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 5/250 (2%)
Query: 96 RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTR 155
RR P S F + S+ + G +G Q H+ ++ GF T
Sbjct: 28 RRVP---SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTF 84
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERN 215
V N ++ +Y A VF ++ + VVSW +++G K + F+ MP R+
Sbjct: 85 VLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRD 144
Query: 216 EVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVH 275
V+W M+ GY+ NG + ++ + +M G E + T +L CS D +G +H
Sbjct: 145 VVSWNSMLSGYLQNGESLKSIEVFVDMGRE-GIEFDGRTFAIILKVCSFLEDTSLGMQIH 203
Query: 276 GFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMG 335
G V+ +G D V+ ++L+DMYAK R +L VF+ + +N V+W+A++ G + +
Sbjct: 204 GIVVR-VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262
Query: 336 KAVVDMFPHM 345
+ F M
Sbjct: 263 SLALKFFKEM 272
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 120/519 (23%), Positives = 205/519 (39%), Gaps = 108/519 (20%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSH----------- 85
GKQ HA ++G P F+ N +L VY A +FD++P
Sbjct: 67 GKQAHAHMIISGF--RPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGY 124
Query: 86 ------------------KDSVDYTALI----RRCPPLESLQLFIEMRQLGLSIDXXXXX 123
+D V + +++ + L+S+++F++M + G+ D
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Query: 124 XXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVP 183
L D ++G Q+H VV+ G +A++D+Y K K F
Sbjct: 185 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK-------GKRF------ 231
Query: 184 SVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMV 243
VES RV F G+PE+N V+W+ +I G V N A KEM
Sbjct: 232 -----------------VESLRV-FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 244 FGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGR 303
++ SVL +C+ ++ +G +H A+K+ G+ V T+ +DMYAKC
Sbjct: 274 -KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI-VRTATLDMYAKCDN 331
Query: 304 ISIALVVFKNMSRRNVVAWNAVLGGLAMHGMG-KAVVDMFPHMVEEVKPDAVTFMALLSA 362
+ A ++F N N ++NA++ G + G KA++ M + D ++ + A
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 363 CSH-SGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM------ 415
C+ GL E + Y ++S + + + A +D+ G+ L EA + +M
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMRRRDAV 449
Query: 416 ----------------------------PIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
I P+E GS+L +C G L +I +
Sbjct: 450 SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 508
Query: 448 VEMD-PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRG 485
V+ N+ L +MY+ G +E+A +R
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRA 547
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/521 (30%), Positives = 274/521 (52%), Gaps = 50/521 (9%)
Query: 48 GLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCP----PLES 103
G +S N+ ++++ Y A +LF E+P+ ++ V +TA+I E+
Sbjct: 224 GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE--RNIVSWTAMISGFAWNELYREA 281
Query: 104 LQLFIEMRQL--GLSIDXXXXXXXXXXXXRLGDP--NVGPQVHSGVVKFGF------GKC 153
L LF+EM++ +S + LG +G Q+H+ V+ G+ G+
Sbjct: 282 LMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRL 341
Query: 154 TRV--------------------------CNAVMDLYVKFGLLGEARKVFGEIE-VPSVV 186
+ CN +++ Y+K G L A +F ++ + V
Sbjct: 342 AKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKV 401
Query: 187 SWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGC 246
SWT ++DG ++ V +F + +++ V WTVMI G V N EA LL +MV C
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMV-RC 460
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMG-WDLGVMVGTSLVDMYAKCGRIS 305
G + T +LS+ + ++ G+ +H K +D +++ SLV MYAKCG I
Sbjct: 461 GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 306 IALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACS 364
A +F M +++ V+WN+++ GL+ HG+ +++F M++ KP++VTF+ +LSACS
Sbjct: 521 DAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS 580
Query: 365 HSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVL 424
HSGL+ +G + F+ ++ Y I+P I+HY M+DLLGRAG L+EAE + +P P+ V
Sbjct: 581 HSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVY 640
Query: 425 GSLLGSCYAHGKLQ----LAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRV 480
G+LLG C + + + +AE+ L+E+DP+N H+ L N+YA G+ + R+
Sbjct: 641 GALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKE 700
Query: 481 LKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKL 521
+ +G++K PG S + V+G+ + F +GDKS +++ L +
Sbjct: 701 MGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPI 741
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 197/470 (41%), Gaps = 57/470 (12%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKD-SVDYTALIRRCPPLESLQLFIEMRQ 112
N+ NA+L Y C + A LF E+P++ +V TAL ++++LF EM +
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 113 LGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGE 172
+ R GD QV + + NA++ Y++ + E
Sbjct: 167 R----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPS----RDVVSWNAMIKGYIENDGMEE 218
Query: 173 ARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFT 232
A+ +FG++ +VV+WT ++ G ++ V +F MPERN V+WT MI G+ N
Sbjct: 219 AKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELY 278
Query: 233 KEAFWLLKEMVFGC-GFELNCVTLCSVLSACSQSGDVC--VGRWVHGFAVKAMGW---DL 286
+EA L EM N TL S+ AC G +G +H V + GW D
Sbjct: 279 REALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHA-QVISNGWETVDH 337
Query: 287 GVMVGTSLVDMYAKCGRISIALVV-----------------FKN-------------MSR 316
+ SLV MYA G I+ A + KN S
Sbjct: 338 DGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSL 397
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYF 376
+ V+W +++ G G +F + ++ D VT+ ++S + L +
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK---DGVTWTVMISGLVQNELFAEAASLL 454
Query: 377 RDLESVYEIRPEIEHYACMVDLLGRAGHLEEAE----LLVKKMPIRPNEVVLGSLLGSCY 432
D+ ++P Y+ ++ G +L++ + ++ K +++L + L S Y
Sbjct: 455 SDMVRC-GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMY 513
Query: 433 AH-GKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVL 481
A G ++ A +I ++V+ D ++ I+ + + L+ K N F+ +L
Sbjct: 514 AKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKA--LNLFKEML 561
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 37/249 (14%)
Query: 151 GKCTRVC--NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVF 208
G RV +++ Y K G L EAR +F + ++V+ +L G VK + +F
Sbjct: 72 GSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF 131
Query: 209 DGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDV 268
MP +N V+WTVM+ +G +++A L EM E N V+ ++++ ++GD+
Sbjct: 132 REMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMP-----ERNVVSWNTLVTGLIRNGDM 185
Query: 269 CVGR-------------W---VHGF-------AVKAMGWDL---GVMVGTSLVDMYAKCG 302
+ W + G+ K + D+ V+ TS+V Y + G
Sbjct: 186 EKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYG 245
Query: 303 RISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM---VEEVKPDAVTFMAL 359
+ A +F M RN+V+W A++ G A + + + + +F M V+ V P+ T ++L
Sbjct: 246 DVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL 305
Query: 360 LSACSHSGL 368
AC G+
Sbjct: 306 AYACGGLGV 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 155/385 (40%), Gaps = 75/385 (19%)
Query: 168 GLLGEARKVFGEI----EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMI 223
G L AR + +I + VV WT +L K ++ RV+F+ MPERN V M+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 224 VGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMG 283
GYV EA+ L +EM N V+ +L+A
Sbjct: 116 TGYVKCRRMNEAWTLFREM------PKNVVSWTVMLTALCDD------------------ 151
Query: 284 WDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG---MGKAVVD 340
GR A+ +F M RNVV+WN ++ GL +G K V D
Sbjct: 152 ------------------GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFD 193
Query: 341 MFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLG 400
P D V++ A++ + +E+ + F D+ + + MV
Sbjct: 194 AMP------SRDVVSWNAMIKGYIENDGMEEAKLLFGDMS-----EKNVVTWTSMVYGYC 242
Query: 401 RAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKL-QLAEKIVREL-VEMDPLNTEYH 458
R G + EA L +MP R +V + + S +A +L + A + E+ ++D ++
Sbjct: 243 RYGDVREAYRLFCEMPER--NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGE 300
Query: 459 ILLSNMYALSG-KVEKANSFRRVLKKRGIRKVP-GMSSIYVDGQL-----HQFSAGDKSH 511
L+S YA G VE FRR+ ++ + + G ++ DG+L H +++
Sbjct: 301 TLISLAYACGGLGVE----FRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIA 356
Query: 512 PRTSEIYLKLDDMICRLRLAGYVPN 536
S + D C + + Y+ N
Sbjct: 357 SAQSLLNESFDLQSCNIIINRYLKN 381
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 248/482 (51%), Gaps = 31/482 (6%)
Query: 39 QLHAVATVTGLLSSPNLFLRNAIL------------HVYAACALPSHARKLFDEIPQSHK 86
Q HA +G +S N F +N++ A+ + S+A +F I ++
Sbjct: 22 QFHAQFITSGRIS--NDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFI--TNP 77
Query: 87 DSVDYTALIRRCP-----PLESLQLFIEMRQLGLSIDXXXX--XXXXXXXXRLGDPNVGP 139
+ + +IR C L S + F+EMR+ + D + GD +
Sbjct: 78 STFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVK 137
Query: 140 QVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWE 199
+H ++FG N ++ +Y + A ++F E VV++ V++DG+VK
Sbjct: 138 TLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAR 197
Query: 200 GVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVL 259
+ R +FD MP R+ V+W +I GY +EA L EMV G + + V + S L
Sbjct: 198 EIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV-ALGLKPDNVAIVSTL 256
Query: 260 SACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV 319
SAC+QSGD G+ +H + + + + + T LVD YAKCG I A+ +F+ S + +
Sbjct: 257 SACAQSGDWQKGKAIHDYTKRKRLF-IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTL 315
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
WNA++ GLAMHG G+ VD F MV +KPD VTF+++L CSHSGLV++ R F
Sbjct: 316 FTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQ 375
Query: 379 LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPI----RPNEVVLGSLLGSCYAH 434
+ S+Y++ E++HY CM DLLGRAG +EEA ++++MP R + LLG C H
Sbjct: 376 MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIH 435
Query: 435 GKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVL-KKRGIRKVPGMS 493
G +++AEK + + P + + ++ MYA + + E+ R ++ + + ++K G S
Sbjct: 436 GNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFS 495
Query: 494 SI 495
+
Sbjct: 496 KV 497
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 251/504 (49%), Gaps = 12/504 (2%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
+Q+H G S ++F+ N ++ Y C ARK+FDE+ S +D V + ++I
Sbjct: 151 ARQVHGFVIRGGFDS--DVFVGNGMITYYTKCDNIESARKVFDEM--SERDVVSWNSMIS 206
Query: 97 RCPPLESLQLFIEMRQLGLSI-----DXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
S + +M + L+ + + D G +VH +++
Sbjct: 207 GYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQ 266
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+CNAV+ Y K G L AR +F E+ V++ ++ G + V+ +F M
Sbjct: 267 MDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
W MI G + N +E +EM+ CG N VTL S+L + + S ++ G
Sbjct: 327 ESIGLSTWNAMISGLMQNNHHEEVINSFREMI-RCGSRPNTVTLSSLLPSLTYSSNLKGG 385
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+ +H FA++ G D + V TS++D YAK G + A VF N R+++AW A++ A+
Sbjct: 386 KEIHAFAIRN-GADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAV 444
Query: 332 HGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
HG + +F M KPD VT A+LSA +HSG + + F + + Y+I P +E
Sbjct: 445 HGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVE 504
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HYACMV +L RAG L +A + KMPI P V G+LL G L++A L EM
Sbjct: 505 HYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEM 564
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
+P NT + +++N+Y +G+ E+A R +K+ G++K+PG S I + L F A D S
Sbjct: 565 EPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSS 624
Query: 511 HPRTSEIYLKLDDMICRLRLAGYV 534
R+ E+Y ++ ++ + Y+
Sbjct: 625 CERSKEMYEIIEGLVESMSDKEYI 648
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 15/286 (5%)
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAF-----WLLKEMVFGCGFELNCVTLCSVLSA 261
VFD + RN ++ +++ Y +AF W+ + +++ VL A
Sbjct: 79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKA 138
Query: 262 CSQSGDVCVG---RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRN 318
S D +G R VHGF ++ G+D V VG ++ Y KC I A VF MS R+
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRG-GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERD 197
Query: 319 VVAWNAVLGGLAMHGMGKAVVDMFPHMV--EEVKPDAVTFMALLSACSHSGLVEQGRQYF 376
VV+WN+++ G + G + M+ M+ + KP+ VT +++ AC S + G +
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH 257
Query: 377 RDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGK 436
+ + + I+ ++ ++ + G L+ A L +M + V G+++ AHG
Sbjct: 258 KKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHGL 315
Query: 437 LQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLK 482
++ A + E+ E L+T ++ ++S + + E NSFR +++
Sbjct: 316 VKEAMALFSEM-ESIGLST-WNAMISGLMQNNHHEEVINSFREMIR 359
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 263/480 (54%), Gaps = 45/480 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQ------------- 83
GK LH+ + G+ S ++ + ++++ +Y C ARK+FDE+P+
Sbjct: 65 GKLLHSESIKFGVCS--DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGY 122
Query: 84 -SHKDSVDYTALIRRCPPLESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQV 141
S+ D+V + L + +IEM + G I+ +
Sbjct: 123 MSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEI-------------------EKA 163
Query: 142 HSGVVKFGFG-KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEG 200
+ F K + + ++ +YV + +ARK F +I + W++++ G +
Sbjct: 164 RELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGD 223
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
V R +F + R+ V W +I GY NG++ +A M G G+E + VT+ S+LS
Sbjct: 224 VHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ-GEGYEPDAVTVSSILS 282
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
AC+QSG + VGR VH + G +L V +L+DMYAKCG + A VF+++S R+V
Sbjct: 283 ACAQSGRLDVGREVHSL-INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA 341
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDL 379
N+++ LA+HG GK ++MF M ++KPD +TF+A+L+AC H G + +G + F ++
Sbjct: 342 CCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM 401
Query: 380 ESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQL 439
++ +++P ++H+ C++ LLGR+G L+EA LVK+M ++PN+ VLG+LLG+C H ++
Sbjct: 402 KT-QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEM 460
Query: 440 AEKIVRELVEMDPLNTEY---HIL-LSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
AE++++ + + Y H+ +SN+YA + + + A + R ++KRG+ K PG+SS+
Sbjct: 461 AEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 171/373 (45%), Gaps = 40/373 (10%)
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
I R P+++L L+ +R+ G+ + +G +HS +KFG
Sbjct: 22 ISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDV 81
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE- 213
V ++++ +Y K G + ARKVF E+ +V +W ++ G + V+ G+ E
Sbjct: 82 MVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS----NGDAVLASGLFEE 137
Query: 214 ----RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC 269
RN V W MI GY ++A L + M FEL V SV+
Sbjct: 138 ISVCRNTVTWIEMIKGYGKRIEIEKARELFERM----PFELKNVKAWSVM---------- 183
Query: 270 VGRWVHGFAV---KAMGWDL---GVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWN 323
+G +V+ + + D+ V + ++ Y + G + A +F + R++V WN
Sbjct: 184 LGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWN 243
Query: 324 AVLGGLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESV 382
++ G A +G +D F +M E +PDAVT ++LSAC+ SG ++ GR+ + S+
Sbjct: 244 TLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE----VHSL 299
Query: 383 YEIRP-EIEHYA--CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYA-HGKLQ 438
R E+ + ++D+ + G LE A + + + +R V + + SC A HGK +
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRS--VACCNSMISCLAIHGKGK 357
Query: 439 LAEKIVRELVEMD 451
A ++ + +D
Sbjct: 358 EALEMFSTMESLD 370
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 262/509 (51%), Gaps = 52/509 (10%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRR 97
K +HA+A ++G + + N ++ Y C R +FD + SH++ + TA+I
Sbjct: 175 KMIHALAILSGY--DKEISVGNKLITSYFKCGCSVSGRGVFDGM--SHRNVITLTAVISG 230
Query: 98 CPPLE----SLQLFIEMRQLGL----SIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG 149
E L+LF MR+ GL S+ R+ + G Q+H+ + K+G
Sbjct: 231 LIENELHEDGLRLFSLMRR-GLVHPNSVTYLSALAACSGSQRIVE---GQQIHALLWKYG 286
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFD 209
+ +A+MD+Y K G + +A WT+ F+
Sbjct: 287 IESELCIESALMDMYSKCGSIEDA--------------WTI-----------------FE 315
Query: 210 GMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC 269
E +EV+ TV++VG NG +EA M+ G E++ + +VL +
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML-QAGVEIDANVVSAVLGVSFIDNSLG 374
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
+G+ +H +K + V L++MY+KCG ++ + VF+ M +RN V+WN+++
Sbjct: 375 LGKQLHSLVIKR-KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAF 433
Query: 330 AMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
A HG G A + ++ M EVKP VTF++LL ACSH GL+++GR+ +++ V+ I P
Sbjct: 434 ARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPR 493
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
EHY C++D+LGRAG L+EA+ + +P++P+ + +LLG+C HG ++ E +L
Sbjct: 494 TEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLF 553
Query: 449 EMDPLNTEYHILLSNMYALSGK-VEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAG 507
+ P ++ HIL++N+Y+ GK E+A + +R +K G+ K G+SSI ++ + H F
Sbjct: 554 QTAPDSSSAHILIANIYSSRGKWKERAKTIKR-MKAMGVTKETGISSIEIEHKTHSFVVE 612
Query: 508 DKSHPRTSEIYLKLDDMICRLRLAGYVPN 536
DK HP+ IY L + + GY P+
Sbjct: 613 DKLHPQAEAIYDVLSGLFPVMVDEGYRPD 641
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 5/234 (2%)
Query: 176 VFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEA 235
V +I ++V W +L K + +FD MP R+ ++ ++ G++ N T+
Sbjct: 81 VDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESG 140
Query: 236 FWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLV 295
F LLK M+ GF+ TL VLS C V + +H A+ + G+D + VG L+
Sbjct: 141 FVLLKRMLGSGGFD--HATLTIVLSVCDTPEFCLVTKMIHALAILS-GYDKEISVGNKLI 197
Query: 296 DMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAV 354
Y KCG VF MS RNV+ AV+ GL + + + + +F M V P++V
Sbjct: 198 TSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSV 257
Query: 355 TFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
T+++ L+ACS S + +G+Q L Y I E+ + ++D+ + G +E+A
Sbjct: 258 TYLSALAACSGSQRIVEGQQ-IHALLWKYGIESELCIESALMDMYSKCGSIEDA 310
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 148/382 (38%), Gaps = 73/382 (19%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDS--VDYTAL 94
G+Q+HA+ G+ S L + +A++ +Y+ C A +F+ + + S V L
Sbjct: 275 GQQIHALLWKYGIES--ELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
+ E++Q FI M Q G+ ID +G Q+HS V+K F T
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
V N ++++Y K G L +++ VF MP+R
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRR-------------------------------MPKR 421
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
N V+W MI + +G A L +EM + VT S+L ACS G + GR +
Sbjct: 422 NYVSWNSMIAAFARHGHGLAALKLYEEMT-TLEVKPTDVTFLSLLHACSHVGLIDKGREL 480
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
+ G + T ++DM + G + A
Sbjct: 481 LNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEA--------------------------- 513
Query: 335 GKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH-YA 393
K+ +D P +KPD + ALL ACS G E G E +++ P+ +
Sbjct: 514 -KSFIDSLP-----LKPDCKIWQALLGACSFHGDTEVGEYA---AEQLFQTAPDSSSAHI 564
Query: 394 CMVDLLGRAGHLEEAELLVKKM 415
+ ++ G +E +K+M
Sbjct: 565 LIANIYSSRGKWKERAKTIKRM 586
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/474 (31%), Positives = 253/474 (53%), Gaps = 17/474 (3%)
Query: 74 ARKLFDEIPQSH--KDSVDYTALIR---RCPPLES-LQLFIEMRQLGLSIDXXXXXXXXX 127
A K+F+ + + D V +T+++ +C E L+ F MR G ++
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFS 302
Query: 128 XXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVS 187
L ++ +VH V+K GF + NA++ +Y K G + +A +F +I + S
Sbjct: 303 VCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIES 362
Query: 188 WTVVLDGVVKWEGVESGRVVFDGMPERNEV--------AWTVMIVGYVGNGFTKEAFWLL 239
W ++ V ++ +F + E N V WT +I G G ++
Sbjct: 363 WNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYF 422
Query: 240 KEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYA 299
++M F N VT+C +LS C++ + +GR +HG ++ ++V +LV+MYA
Sbjct: 423 RQMQFSKVLA-NSVTICCILSICAELPALNLGREIHGHVIRT-SMSENILVQNALVNMYA 480
Query: 300 KCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMA 358
KCG +S +VF+ + +++++WN+++ G MHG + + MF M+ PD + +A
Sbjct: 481 KCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVA 540
Query: 359 LLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
+LSACSH+GLVE+GR+ F + + + P+ EHYAC+VDLLGR G L+EA +VK MP+
Sbjct: 541 VLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPME 600
Query: 419 PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFR 478
P VLG+LL SC H + +AE I +L ++P T ++LLSN+Y+ G+ E++ + R
Sbjct: 601 PKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVR 660
Query: 479 RVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAG 532
+ KK+ ++KV G S I V + ++FS+G IY L+D++ + G
Sbjct: 661 ALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 157/357 (43%), Gaps = 17/357 (4%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRR 97
+Q+HA ++ + N ++ VYA L AR +F+ + + I +
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILK 131
Query: 98 CPPL-----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+L+L+ MRQ GL+ D LG + H+ V++ G +
Sbjct: 132 ANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKE 191
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N ++ LY K G +G+A +F E+ V + +SW V++ G + ES +F+ M
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 213 ER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDV 268
+EV WT ++ + G ++ M G ++ L S C++ +
Sbjct: 252 REEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMS-GNAVSGEALAVFFSVCAELEAL 310
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
+ VHG+ +K G++ + +L+ +Y K G++ A +F+ + + + +WN+++
Sbjct: 311 SIAEKVHGYVIKG-GFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITS 369
Query: 329 LAMHGMGKAVVDMFPHMVE-----EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLE 380
G + +F + E VK + VT+ +++ C+ G + +YFR ++
Sbjct: 370 FVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 253/528 (47%), Gaps = 47/528 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+++ ++ +G +S L + N+++ +Y C+ A K+F ++ ++ V + +L+
Sbjct: 89 GRKIQSLVIRSGFCAS--LPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLF 146
Query: 96 ---------------------------------RRCPPLES-LQLFIEMRQLGLSIDXXX 121
C LES L LF EM + D
Sbjct: 147 AYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYT 206
Query: 122 XXXXXXXXXRLGDPNV--GPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGE 179
NV G VH+ ++K G+ N+V+ Y K G +A +
Sbjct: 207 FSSLMNACSA-DSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELES 265
Query: 180 IEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLL 239
IEV + VSW ++D +K E VF PE+N V WT MI GY NG ++A
Sbjct: 266 IEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFF 325
Query: 240 KEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYA 299
EM+ G + + +VL ACS + G+ +HG + G+ VG +LV++YA
Sbjct: 326 VEMM-KSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHC-GFQGYAYVGNALVNLYA 383
Query: 300 KCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMA 358
KCG I A F +++ +++V+WN +L +HG+ + ++ +M+ +KPD VTF+
Sbjct: 384 KCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIG 443
Query: 359 LLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKK---- 414
LL+ CSHSGLVE+G F + Y I E++H CM+D+ GR GHL EA+ L
Sbjct: 444 LLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSL 503
Query: 415 MPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKA 474
+ N +LLG+C H +L ++ + L +P +LLSN+Y +G+ ++
Sbjct: 504 VTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEG 563
Query: 475 NSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLD 522
RR + +RG++K PG S I V Q+ F GD SHPR E+ L+
Sbjct: 564 EDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLN 611
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 190/445 (42%), Gaps = 56/445 (12%)
Query: 74 ARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXX 129
AR++FD +P+ D+V + ++ L E++ LF ++R D
Sbjct: 23 ARQVFDGMPE--LDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTC 80
Query: 130 XRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEI--EVPSVVS 187
LG+ G ++ S V++ GF V N+++D+Y K A KVF ++ + + V+
Sbjct: 81 ASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVT 140
Query: 188 WTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCG 247
W +L + E E+ VF MP+R AW +MI G+ G + L KEM+
Sbjct: 141 WCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEML-ESE 199
Query: 248 FELNCVTLCSVLSACS-QSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYA------- 299
F+ +C T S+++ACS S +V GR VH +K GW V S++ Y
Sbjct: 200 FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEAKNSVLSFYTKLGSRDD 258
Query: 300 ------------------------KCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMG 335
K G AL VF +N+V W ++ G +G G
Sbjct: 259 AMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDG 318
Query: 336 KAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYA- 393
+ + F M++ V D + A+L ACS L+ G+ L I + YA
Sbjct: 319 EQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL-----IHCGFQGYAY 373
Query: 394 ---CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE- 449
+V+L + G ++EA+ + + V ++L + HG A K+ ++
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 450 -MDPLNTEYHILLSNMYALSGKVEK 473
+ P N + LL+ + SG VE+
Sbjct: 433 GIKPDNVTFIGLLTTC-SHSGLVEE 456
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
+ S R VFDGMPE + VAW M+ Y G +EA L ++ F + + + ++LS
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS-DAKPDDYSFTAILS 78
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCG------------------ 302
C+ G+V GR + +++ G+ + V SL+DMY KC
Sbjct: 79 TCASLGNVKFGRKIQSLVIRS-GFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRN 137
Query: 303 ---------------RISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE 347
+ AL VF M +R AWN ++ G A G ++ + +F M+E
Sbjct: 138 EVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLE 197
Query: 348 -EVKPDAVTFMALLSACS 364
E KPD TF +L++ACS
Sbjct: 198 SEFKPDCYTFSSLMNACS 215
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 267/517 (51%), Gaps = 24/517 (4%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVD--YTAL 94
KQL + + N+ N ++ YA A +LFDE+P+ + S + AL
Sbjct: 122 SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKAL 181
Query: 95 IRRCPPLESLQLFIEMRQLGL-----SIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG 149
++R E++ LF M + + +D RL D P+ ++ +
Sbjct: 182 VQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFD--CMPE--RNIISW- 236
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFD 209
NA++ Y + + EA ++F + SW ++ G ++ + +FD
Sbjct: 237 --------NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 210 GMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC 269
MPE+N ++WT MI GYV N +EA + +M+ + N T S+LSACS +
Sbjct: 289 RMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV 348
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKN--MSRRNVVAWNAVLG 327
G+ +H K++ +V ++L++MY+K G + A +F N + +R++++WN+++
Sbjct: 349 EGQQIHQLISKSVH-QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIA 407
Query: 328 GLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIR 386
A HG GK ++M+ M + KP AVT++ LL ACSH+GLVE+G ++F+DL +
Sbjct: 408 VYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
Query: 387 PEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRE 446
EHY C+VDL GRAG L++ + R + G++L +C H ++ +A+++V++
Sbjct: 468 LREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKK 527
Query: 447 LVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSA 506
++E + ++L+SN+YA +GK E+A R +K++G++K PG S + V Q H F
Sbjct: 528 VLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVV 587
Query: 507 GDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLF 543
GDKSHP+ + L D+ ++R V + + F
Sbjct: 588 GDKSHPQFEALDSILSDLRNKMRKNKNVTSDAEEAEF 624
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 21/252 (8%)
Query: 169 LLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVG 228
L R ++ P V ++ + K + R +FDG+PER+ V WT +I GY+
Sbjct: 30 LFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIK 89
Query: 229 NGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGV 288
G +EA +E+ N VT +++S +S + + + + M + V
Sbjct: 90 LGDMREA----RELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEML----FQEMP-ERNV 140
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE 348
+ +++D YA+ GRI AL +F M RN+V+WN+++ L G +++F M
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM--- 197
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE--IEHYACMVDLLGRAGHLE 406
+ D V++ A++ + +G V++ R+ F + PE I + M+ + ++
Sbjct: 198 PRRDVVSWTAMVDGLAKNGKVDEARRLF-------DCMPERNIISWNAMITGYAQNNRID 250
Query: 407 EAELLVKKMPIR 418
EA+ L + MP R
Sbjct: 251 EADQLFQVMPER 262
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 179/415 (43%), Gaps = 68/415 (16%)
Query: 164 YVKFGLLGEARKVFGEIEV-PSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVM 222
Y+K G + EAR++F ++ +VV+WT ++ G ++ + + ++F MPERN V+W M
Sbjct: 87 YIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTM 146
Query: 223 IVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG--DVCVGRWVHGFAVK 280
I GY +G +A L EM E N V+ S++ A Q G D + +
Sbjct: 147 IDGYAQSGRIDKALELFDEMP-----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRD 201
Query: 281 AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVD 340
+ W T++VD AK G++ A +F M RN+++WNA++ G A +
Sbjct: 202 VVSW-------TAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQ 254
Query: 341 MFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLE-----SVYEIRPEIEHYACM 395
+F M E D ++ +++ + R+ E +++ PE +
Sbjct: 255 LFQVMPER---DFASWNTMITG------------FIRNREMNKACGLFDRMPEKNVISWT 299
Query: 396 VDLLGRAGHLEEAELL------VKKMPIRPNEVVLGSLLGSCYAHGKL----QLAEKIVR 445
+ G + E E L ++ ++PN S+L +C L Q+ + I +
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 446 ELVEMDPLNTEYHILLSNMYALSGKVEKANSF--RRVLKKRGIRKVPGMSSIYVDGQLHQ 503
+ + + + T L NMY+ SG++ A ++ +R + M ++Y
Sbjct: 360 SVHQKNEIVTS---ALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA------ 410
Query: 504 FSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPN--TTCQVLFGCSSSGDCTEALE 556
H E +M ++R G+ P+ T +LF CS +G + +E
Sbjct: 411 ------HHGHGKEAI----EMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGME 455
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 192/478 (40%), Gaps = 120/478 (25%)
Query: 72 SHARKLFDEIPQSHKDSVDYTALIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXR 131
+ ARKLFD +P+ +D V +T +I L ++ E R+L +D
Sbjct: 63 AEARKLFDGLPE--RDVVTWTHVITGYIKLGDMR---EARELFDRVDS------------ 105
Query: 132 LGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVV 191
VV + A++ Y++ L A +F E+ +VVSW +
Sbjct: 106 ----------RKNVVTW---------TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTM 146
Query: 192 LDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEM--------- 242
+DG + ++ +FD MPERN V+W M+ V G EA L + M
Sbjct: 147 IDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWT 206
Query: 243 -----------------VFGCGFELNCVTLCSVLSACSQSGDVCVGRWV------HGFAV 279
+F C E N ++ ++++ +Q+ + + FA
Sbjct: 207 AMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA- 265
Query: 280 KAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVV 339
W+ + +M CG +F M +NV++W ++ G + + +
Sbjct: 266 ---SWNTMITGFIRNREMNKACG-------LFDRMPEKNVISWTTMITGYVENKENEEAL 315
Query: 340 DMFPHMVEE--VKPDAVTFMALLSACSH-SGLVEQGRQYFRDLESVYEIRPEIEHYA--- 393
++F M+ + VKP+ T++++LSACS +GLVE G+Q + + + EI A
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE-GQQIHQLISKSVHQKNEIVTSALLN 374
Query: 394 --------------------CMVDLL---------GRAGHLEEAELLVKKMP---IRPNE 421
C DL+ GH +EA + +M +P+
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 422 VVLGSLLGSCYAHGKLQLAEKIVRELV--EMDPLNTEYHILLSNMYALSGKVEKANSF 477
V +LL +C G ++ + ++LV E PL E++ L ++ +G+++ +F
Sbjct: 435 VTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNF 492
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 192/329 (58%), Gaps = 2/329 (0%)
Query: 197 KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
K E S R++FD M R V+WTVMI GY G EA L M+ G + + VTL
Sbjct: 303 KSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI-KSGEKPDLVTLL 361
Query: 257 SVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR 316
S++S C + G + G+W+ A VM+ +L+DMY+KCG I A +F N
Sbjct: 362 SLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE 421
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQY 375
+ VV W ++ G A++G+ + +F M++ + KP+ +TF+A+L AC+HSG +E+G +Y
Sbjct: 422 KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEY 481
Query: 376 FRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHG 435
F ++ VY I P ++HY+CMVDLLGR G LEEA L++ M +P+ + G+LL +C H
Sbjct: 482 FHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHR 541
Query: 436 KLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
+++AE+ L ++P ++ ++N+YA +G + R ++K+R I+K PG S I
Sbjct: 542 NVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601
Query: 496 YVDGQLHQFSAGDKSHPRTSEIYLKLDDM 524
V+G+ H F+ G+ H IY L+ +
Sbjct: 602 QVNGKNHSFTVGEHGHVENEVIYFTLNGL 630
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
+ R P+ESL LF EM++ G + RL D VH+ ++K F
Sbjct: 28 VNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDV 87
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
V A +D++VK + A KV F+ MPER
Sbjct: 88 FVGTATVDMFVKCNSVDYAAKV-------------------------------FERMPER 116
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
+ W M+ G+ +G T +AF L +EM + VT+ +++ + S + + +
Sbjct: 117 DATTWNAMLSGFCQSGHTDKAFSLFREMRLN-EITPDSVTVMTLIQSASFEKSLKLLEAM 175
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR--RNVVAWNAVLGGLAMH 332
H ++ +G D+ V V + + Y KCG + A +VF+ + R R VV+WN++ ++
Sbjct: 176 HAVGIR-LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVF 234
Query: 333 GMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGR 373
G ++ M+ EE KPD TF+ L ++C + + QGR
Sbjct: 235 GEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 190/447 (42%), Gaps = 49/447 (10%)
Query: 49 LLSSP---NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPL 101
L+ SP ++F+ A + ++ C +A K+F+ +P+ +D+ + A++ +
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPE--RDATTWNAMLSGFCQSGHTD 135
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
++ LF EMR ++ D + +H+ ++ G V N +
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 162 DLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTV 221
Y K G L A+ VF E ++ G +R V+W
Sbjct: 196 STYGKCGDLDSAKLVF---------------------EAIDRG--------DRTVVSWNS 226
Query: 222 MIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKA 281
M Y G +AF L M+ F+ + T ++ ++C + GR +H A+
Sbjct: 227 MFKAYSVFGEAFDAFGLYCLMLRE-EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH- 284
Query: 282 MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDM 341
+G D + + + MY+K A ++F M+ R V+W ++ G A G + +
Sbjct: 285 LGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALAL 344
Query: 342 FPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI-RPEIEHYACMVDLL 399
F M++ KPD VT ++L+S C G +E G+ + +Y R + ++D+
Sbjct: 345 FHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK-WIDARADIYGCKRDNVMICNALIDMY 403
Query: 400 GRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYA-HGKLQLAEKIVRELVEMD--PLNTE 456
+ G + EA + P + VV + + + YA +G A K+ +++++D P +
Sbjct: 404 SKCGSIHEARDIFDNTPEKT--VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHIT 461
Query: 457 YHILLSNMYALSGKVEKANSFRRVLKK 483
+ +L A SG +EK + ++K+
Sbjct: 462 FLAVLQAC-AHSGSLEKGWEYFHIMKQ 487
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
AW + I V E+ L +EM G GFE N T V AC++ DV VH
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRG-GFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 278 AVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKA 337
+K+ W V VGT+ VDM+ KC + A VF+ M R+ WNA+L G G
Sbjct: 78 LIKSPFWS-DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 338 VVDMFPHM-VEEVKPDAVTFMALLSACS 364
+F M + E+ PD+VT M L+ + S
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSAS 164
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 52/307 (16%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ +H+ A G + ++ N + +Y+ AR LFD + + + V +T +I
Sbjct: 275 GRLIHSHAIHLG--TDQDIEAINTFISMYSKSEDTCSARLLFDIM--TSRTCVSWTVMIS 330
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ E+L LF M + G D + G G + + +G
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG--- 387
Query: 153 CTR----VCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVF 208
C R +CNA++D+Y K G + EAR +F
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIF------------------------------- 416
Query: 209 DGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDV 268
D PE+ V WT MI GY NG EA L +M+ ++ N +T +VL AC+ SG +
Sbjct: 417 DNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI-DLDYKPNHITFLAVLQACAHSGSL 475
Query: 269 CVGRWVHGFAVKAMGWDL--GVMVGTSLVDMYAKCGRISIALVVFKNMSRR-NVVAWNAV 325
G W + F + +++ G+ + +VD+ + G++ AL + +NMS + + W A+
Sbjct: 476 EKG-WEY-FHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGAL 533
Query: 326 LGGLAMH 332
L +H
Sbjct: 534 LNACKIH 540
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 254/499 (50%), Gaps = 42/499 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ +H G S +L L N++L+ YA A LF I + KD + ++ +I
Sbjct: 182 GRCVHGFVIRRGF--SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE--KDVISWSTVIA 237
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ E+L +F +M G + D G + H ++ G
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+V A++D+Y+K EA VF I VVSW ++ G +GM
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG-----------FTLNGMA 346
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
R+ +++M+ + N +A ++K VL +CS+ G + +
Sbjct: 347 HRSIEEFSIML---LENNTRPDAILMVK-----------------VLGSCSELGFLEQAK 386
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
H + +K G+D +G SLV++Y++CG + A VF ++ ++ V W +++ G +H
Sbjct: 387 CFHSYVIK-YGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIH 445
Query: 333 GMGKAVVDMFPHMVE--EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
G G ++ F HMV+ EVKP+ VTF+++LSACSH+GL+ +G + F+ + + Y + P +E
Sbjct: 446 GKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLE 505
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HYA +VDLLGR G L+ A + K+MP P +LG+LLG+C H ++AE + ++L E+
Sbjct: 506 HYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFEL 565
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
+ + Y++L+SN+Y + G+ E R +K+RGI+K S I + ++H+F A D+
Sbjct: 566 ESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDEL 625
Query: 511 HPRTSEIYLKLDDMICRLR 529
HP +Y L ++ ++
Sbjct: 626 HPEKEPVYGLLKELDLHMK 644
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 209/483 (43%), Gaps = 83/483 (17%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ +H L S +L++ ++++++Y C A ++FDE+ + D V +++++
Sbjct: 79 GEMIHGFVKKDVTLGS-DLYVGSSLIYMYIKCGRMIEALRMFDELEKP--DIVTWSSMVS 135
Query: 96 ---RRCPPLESLQLFIEMRQLG-LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
+ P ++++ F M ++ D +L + +G VH V++ GF
Sbjct: 136 GFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS 195
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ N++++ Y K EA +F I V+SW+ V
Sbjct: 196 NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTV-------------------- 235
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
I YV NG EA + +M+ G E N T+ VL AC+ + D+ G
Sbjct: 236 -----------IACYVQNGAAAEALLVFNDMM-DDGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
R H A++ G + V V T+LVDMY KC A VF + R++VV+W A++ G +
Sbjct: 284 RKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 332 HGMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRD-LESVYEIRPE 388
+GM ++ F M+ E +PDA+ + +L +CS G +EQ + + ++ ++ P
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPF 402
Query: 389 IEHYACMVDLLGRAGH-----------------------------------LEEAELLVK 413
I A +V+L R G LE +VK
Sbjct: 403 IG--ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVK 460
Query: 414 KMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPL--NTEYHILLSNMYALSGKV 471
++PNEV S+L +C G + +I + +V L N E++ +L ++ G +
Sbjct: 461 SSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDL 520
Query: 472 EKA 474
+ A
Sbjct: 521 DTA 523
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 138/287 (48%), Gaps = 35/287 (12%)
Query: 132 LGDPNVGPQVHSGVVK-FGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTV 190
L + N G +H V K G V ++++ +Y+K G + EA ++F E+E P +V+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT--- 129
Query: 191 VLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFEL 250
W+ M+ G+ NG +A + MV
Sbjct: 130 ----------------------------WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP 161
Query: 251 NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVV 310
+ VTL +++SAC++ + +GR VHGF ++ G+ + + SL++ YAK A+ +
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRR-GFSNDLSLVNSLLNCYAKSRAFKEAVNL 220
Query: 311 FKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLV 369
FK ++ ++V++W+ V+ +G + +F M+++ +P+ T + +L AC+ + +
Sbjct: 221 FKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDL 280
Query: 370 EQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP 416
EQGR+ +L + E++ +VD+ + EEA + ++P
Sbjct: 281 EQGRKT-HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 326
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 149/345 (43%), Gaps = 40/345 (11%)
Query: 197 KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
K+ R +F M +R+ W ++ +E + M F + + TL
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHM-FRDEEKPDNFTLP 64
Query: 257 SVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR 316
L AC + +V G +HGF K + + VG+SL+ MY KCGR+ AL +F + +
Sbjct: 65 VALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHMV--EEVKPDAVTFMALLSACS---------- 364
++V W++++ G +G V+ F MV +V PD VT + L+SAC+
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 365 -HSGLVEQG-----------------RQYFRDLESVYEIRPEIE--HYACMVDLLGRAGH 404
H ++ +G + F++ +++++ E + ++ ++ + G
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 405 LEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHI-- 459
EA L+ M PN + +L +C A L+ K EL L TE +
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRK-THELAIRKGLETEVKVST 303
Query: 460 LLSNMYALSGKVEKANS-FRRVLKKRGIRKVPGMSSIYVDGQLHQ 503
L +MY E+A + F R+ +K + V +S ++G H+
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHR 348
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 247/476 (51%), Gaps = 44/476 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+ +H+ GL ++ + ++++ +YA C +ARKLFDEI + +D+V + ++I
Sbjct: 151 GRSVHSSLFKVGL--ERDVHINHSLIMMYAKCGQVGYARKLFDEITE--RDTVSWNSMIS 206
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+++ LF +M + G D LGD G + + G
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 266
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
T + + ++ +Y K G L AR+VF + M
Sbjct: 267 STFLGSKLISMYGKCGDLDSARRVFNQ-------------------------------MI 295
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+++ VAWT MI Y NG + EAF L EM G + TL +VLSAC G + +G+
Sbjct: 296 KKDRVAWTAMITVYSQNGKSSEAFKLFFEME-KTGVSPDAGTLSTVLSACGSVGALELGK 354
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+ A + + + V T LVDMY KCGR+ AL VF+ M +N WNA++ A
Sbjct: 355 QIETHASE-LSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 333 GMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
G K + +F M V P +TF+ +LSAC H+GLV QG +YF ++ S++ + P+IEHY
Sbjct: 414 GHAKEALLLFDRM--SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHY 471
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM-D 451
++DLL RAG L+EA +++ P +P+E++L ++LG+C+ + + EK +R L+EM +
Sbjct: 472 TNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKE 531
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAG 507
N +++ SN+ A +++ R +++ RG+ K PG S I ++G+L +F AG
Sbjct: 532 AKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 159/334 (47%), Gaps = 39/334 (11%)
Query: 103 SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMD 162
+L L+ M+ GL D +L + VG VHS + K G + + ++++
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 163 LYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVM 222
+Y K G +G ARK+F EI ER+ V+W M
Sbjct: 176 MYAKCGQVGYARKLFDEI-------------------------------TERDTVSWNSM 204
Query: 223 IVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAV-KA 281
I GY G+ K+A L ++M GFE + TL S+L ACS GD+ GR + A+ K
Sbjct: 205 ISGYSEAGYAKDAMDLFRKME-EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK 263
Query: 282 MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDM 341
+G L +G+ L+ MY KCG + A VF M +++ VAW A++ + +G +
Sbjct: 264 IG--LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKL 321
Query: 342 FPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLG 400
F M + V PDA T +LSAC G +E G+Q S ++ I +VD+ G
Sbjct: 322 FFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ-IETHASELSLQHNIYVATGLVDMYG 380
Query: 401 RAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAH 434
+ G +EEA + + MP++ NE +++ + YAH
Sbjct: 381 KCGRVEEALRVFEAMPVK-NEATWNAMI-TAYAH 412
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 38/341 (11%)
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ + R++ ++ + SV ++ V+ +F E N ++ MI G
Sbjct: 50 VNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNT 109
Query: 230 GFTKEA-FWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGV 288
EA L + M F G + + T V AC++ ++ VGR VH K +G + V
Sbjct: 110 WNDHEAALSLYRRMKFS-GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFK-VGLERDV 167
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE 348
+ SL+ MYAKCG++ A +F ++ R+ V+WN+++ G + G K +D+F M EE
Sbjct: 168 HINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEE 227
Query: 349 -VKPDAVTFMALLSACSHSGLVEQGR-----------------------QYFR--DLESV 382
+PD T +++L ACSH G + GR Y + DL+S
Sbjct: 228 GFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSA 287
Query: 383 YE-----IRPEIEHYACMVDLLGRAGHLEEAELL---VKKMPIRPNEVVLGSLLGSCYAH 434
I+ + + M+ + + G EA L ++K + P+ L ++L +C +
Sbjct: 288 RRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSV 347
Query: 435 GKLQLAEKIVRELVEMDPLNTEYHIL-LSNMYALSGKVEKA 474
G L+L ++I E+ + Y L +MY G+VE+A
Sbjct: 348 GALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEA 388
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 243/467 (52%), Gaps = 43/467 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTAL-- 94
G +H +A GL + ++ +++ +YA A+K+FDEIP ++SV + L
Sbjct: 128 GILIHGLAMKNGL--DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPV--RNSVLWGVLMK 183
Query: 95 --IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
++ E +LF MR GL++D + VG VH ++ F
Sbjct: 184 GYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFID 243
Query: 153 CTRVCNA-VMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ A ++D+YVK LL ARK+ F+
Sbjct: 244 QSDYLQASIIDMYVKCRLLDNARKL-------------------------------FETS 272
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
+RN V WT +I G+ EAF L ++M+ C TL ++L +CS G + G
Sbjct: 273 VDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC-TLAAILVSCSSLGSLRHG 331
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+ VHG+ ++ G ++ + TS +DMYA+CG I +A VF M RNV++W++++ +
Sbjct: 332 KSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGI 390
Query: 332 HGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+G+ + +D F M + V P++VTF++LLSACSHSG V++G + F + Y + PE E
Sbjct: 391 NGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEE 450
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HYACMVDLLGRAG + EA+ + MP++P G+LL +C H ++ LA +I +L+ M
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSM 510
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV 497
+P + ++LLSN+YA +G E N RR + +G RK G S+ V
Sbjct: 511 EPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 244/466 (52%), Gaps = 12/466 (2%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDY--TAL 94
GK++HA TG N+ ++ ILH+ C S+AR++FDE+P+ + +Y +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCL--SYARQVFDELPKPTLSAYNYMISGY 110
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQ-----VHSGVVKFG 149
++ E L L M G D G + P+ VH+ ++K
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFD 209
+ A++D YVK G L AR VF ++ +VV T ++ G + VE +F+
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 210 GMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC 269
++ V + M+ G+ +G T + + + GF N T SV+ ACS
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
VG+ VH +K+ G + +G+SL+DMYAKCG I+ A VF M +NV +W +++ G
Sbjct: 291 VGQQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 330 AMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
+G + +++F M E ++P+ VTF+ LSACSHSGLV++G + F ++ Y ++P+
Sbjct: 350 GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
+EHYAC+VDL+GRAG L +A + MP RP+ + +LL SC HG ++LA EL
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Query: 449 EMDPLNTE-YHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMS 493
+++ ++ LSN+YA + K + + R V+K+R I K G S
Sbjct: 470 KLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 162/424 (38%), Gaps = 108/424 (25%)
Query: 135 PNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDG 194
P G ++H+ ++K GF + ++ L++K G L AR+VF E+ P++
Sbjct: 50 PKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTL--------- 100
Query: 195 VVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVT 254
A+ MI GY+ +G KE L++ M + G + + T
Sbjct: 101 ----------------------SAYNYMISGYLKHGLVKELLLLVQRMSYS-GEKADGYT 137
Query: 255 LCSVLSACSQSGDVCV-----GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALV 309
L VL A + G + R VH +K +L ++ T+LVD Y K G++ A
Sbjct: 138 LSMVLKASNSRGSTMILPRSLCRLVHARIIKC-DVELDDVLITALVDTYVKSGKLESART 196
Query: 310 VFKNMSRRNV-------------------------------VAWNAVLGGLAMHG-MGKA 337
VF+ M NV V +NA++ G + G K
Sbjct: 197 VFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKR 256
Query: 338 VVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQY--------------------- 375
VDM+ M P+ TF +++ ACS E G+Q
Sbjct: 257 SVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
Query: 376 -------FRDLESVYEIRPE--IEHYACMVDLLGRAGHLEEAELLVKKMP---IRPNEVV 423
D V++ E + + M+D G+ G+ EEA L +M I PN V
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 424 LGSLLGSCYAHGKLQLAEKIVREL---VEMDPLNTEYHILLSNMYALSGKVEKANSFRRV 480
L +C G + +I + M P E++ + ++ +G + KA F R
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESMQRDYSMKP-KMEHYACIVDLMGRAGDLNKAFEFARA 435
Query: 481 LKKR 484
+ +R
Sbjct: 436 MPER 439
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 246/495 (49%), Gaps = 46/495 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+Q+H + GLL + L NA++ +Y+ C + A K+FD ++S+ ++A++
Sbjct: 240 GRQIHCITIKNGLLGF--VALSNALVTMYSKCESLNEACKMFD--SSGDRNSITWSAMVT 295
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ LE+++LF M G+ + G Q+HS ++K GF +
Sbjct: 296 GYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFER 355
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
A++D+Y K G L +ARK F D +
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGF-------------------------------DCLQ 384
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
ER+ WT +I GYV N +EA L + M G N T+ SVL ACS + +G+
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTA-GIIPNDPTMASVLKACSSLATLELGK 443
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
VHG +K G+ L V +G++L MY+KCG + +VF+ ++VV+WNA++ GL+ +
Sbjct: 444 QVHGHTIK-HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHN 502
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G G +++F M+ E ++PD VTF+ ++SACSH G VE+G YF + + P+++H
Sbjct: 503 GQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDH 562
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
YACMVDLL RAG L+EA+ ++ I + LL +C HGK +L +L+ +
Sbjct: 563 YACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG 622
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
+ ++ LS +Y G++ + ++ G+ K G S I + Q H F GD H
Sbjct: 623 SRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMH 682
Query: 512 PRTSEIYLKLDDMIC 526
P E D++C
Sbjct: 683 PMIEET----KDLVC 693
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 208/515 (40%), Gaps = 92/515 (17%)
Query: 36 PGKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI 95
G+ +H TG +S + N +++ YA C + A +F+ I KD V + +LI
Sbjct: 32 AGRAVHGQIIRTG--ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIIC--KDVVSWNSLI 87
Query: 96 RR-------CPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKF 148
+QLF EMR + + L VG Q H+ VVK
Sbjct: 88 TGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 149 GFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVF 208
V +++ +Y K GL+ + KVF +
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM---------------------------- 179
Query: 209 DGMPERNEVAWTVMIVGYVGNGFTKEAF----WLLKEMVFGCGFELNCVTLCSVLSACSQ 264
PERN W+ M+ GY G +EA L+E G + +VLS+ +
Sbjct: 180 ---PERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY---VFTAVLSSLAA 233
Query: 265 SGDVCVGRWVHGFAVKA--MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAW 322
+ V +GR +H +K +G+ V + +LV MY+KC ++ A +F + RN + W
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGF---VALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 323 NAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
+A++ G + +G V +F M +KP T + +L+ACS +E+G+Q L
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 382 VYEIRPEIEHYACMVDLLGRAGHL-------------------------------EEAEL 410
+ R A +VD+ +AG L EEA +
Sbjct: 351 LGFERHLFATTA-LVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALI 409
Query: 411 LVKKMP---IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD-PLNTEYHILLSNMYA 466
L ++M I PN+ + S+L +C + L+L +++ ++ L LS MY+
Sbjct: 410 LYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYS 469
Query: 467 LSGKVEKAN-SFRRVLKKRGIRKVPGMSSIYVDGQ 500
G +E N FRR K + +S + +GQ
Sbjct: 470 KCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 173/453 (38%), Gaps = 93/453 (20%)
Query: 138 GPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVK 197
G VH +++ G C + N +++ Y K G L +A +F I VVSW ++ G +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 198 WEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCS 257
G+ S ++TVM L +EM N TL
Sbjct: 93 NGGISS--------------SYTVM--------------QLFREMR-AQDILPNAYTLAG 123
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR 317
+ A S VGR H VK + + V TSLV MY K G + L VF M R
Sbjct: 124 IFKAESSLQSSTVGRQAHALVVKMSSFG-DIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 318 NVVAWNAVLGGLAMHGM---GKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQ 374
N W+ ++ G A G V ++F EE F A+LS+ + + V GRQ
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242
Query: 375 ----------------------YFRDLESVYEI---------RPEIEHYACMVDLLGRAG 403
+ ES+ E R I ++ MV + G
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSIT-WSAMVTGYSQNG 301
Query: 404 HLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHIL 460
EA L +M I+P+E + +L +C L+ +++ L++ L E H+
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK---LGFERHLF 358
Query: 461 ----LSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSE 516
L +MYA +G + A L++R + + S YV S +
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYV----------QNSDNEEAL 408
Query: 517 IYLKLDDMICRLRLAGYVPN--TTCQVLFGCSS 547
I + R++ AG +PN T VL CSS
Sbjct: 409 ILYR------RMKTAGIIPNDPTMASVLKACSS 435
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 19/231 (8%)
Query: 249 ELN--CVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
ELN TL L+ SQ ++ GR VHG ++ G + LV+ YAKCG+++
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRT-GASTCIQHANVLVNFYAKCGKLAK 67
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHG---MGKAVVDMFPHM-VEEVKPDAVTFMALLSA 362
A +F + ++VV+WN+++ G + +G V+ +F M +++ P+A T + A
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 363 CSHSGLVEQGRQYFR---DLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRP 419
S GRQ + S +I + +V + +AG +E+ + MP R
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVD----TSLVGMYCKAGLVEDGLKVFAYMPER- 182
Query: 420 NEVVLGSLLGSCYAHGKLQLAEKI----VRELVEMDPLNTEYHILLSNMYA 466
N +++ G+++ A K+ +RE E + + +LS++ A
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 245/487 (50%), Gaps = 42/487 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK +H V G +++ L + N++ +Y C LF+ + S +D V +T+LI
Sbjct: 228 GKAIHTHVIVRGFVTT--LCVANSLATMYTECGEMQDGLCLFENM--SERDVVSWTSLIV 283
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R +++++ FI+MR + + L G Q+H V+ G
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N++M +Y G L S V+F GM
Sbjct: 344 SLSVSNSMMKMYSTCGNL-------------------------------VSASVLFQGMR 372
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
R+ ++W+ +I GY GF +E F M G + L S+LS + GR
Sbjct: 373 CRDIISWSTIIGGYCQAGFGEEGFKYFSWMR-QSGTKPTDFALASLLSVSGNMAVIEGGR 431
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
VH A+ G + V +SL++MY+KCG I A ++F R ++V+ A++ G A H
Sbjct: 432 QVHALAL-CFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEH 490
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G K +D+F ++ +PD+VTF+++L+AC+HSG ++ G YF ++ Y +RP EH
Sbjct: 491 GKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEH 550
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
Y CMVDLL RAG L +AE ++ +M + ++VV +LL +C A G ++ + ++E+D
Sbjct: 551 YGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELD 610
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P + L+N+Y+ +G +E+A + R+ +K +G+ K PG SSI + + F +GD+ H
Sbjct: 611 PTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFH 670
Query: 512 PRTSEIY 518
P++ +IY
Sbjct: 671 PQSEDIY 677
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 176/409 (43%), Gaps = 44/409 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+ LHA A T LLSS +++ +++L +Y + ++F E+P +++V +TA+I
Sbjct: 127 GESLHAYAVKTSLLSS--VYVGSSLLDMYKRVGKIDKSCRVFSEMP--FRNAVTWTAIIT 182
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
E L F EM + D L G +H+ V+ GF
Sbjct: 183 GLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVT 242
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N++ +Y + G + DG+ +E M
Sbjct: 243 TLCVANSLATMYTECGEMQ---------------------DGLCLFE----------NMS 271
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
ER+ V+WT +IV Y G +A +M N T S+ SAC+ + G
Sbjct: 272 ERDVVSWTSLIVAYKRIGQEVKAVETFIKMR-NSQVPPNEQTFASMFSACASLSRLVWGE 330
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H V ++G + + V S++ MY+ CG + A V+F+ M R++++W+ ++GG
Sbjct: 331 QLH-CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA 389
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G G+ F M + KP +LLS + ++E GRQ L + +
Sbjct: 390 GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTV 448
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLA 440
+ ++++ + G ++EA ++ + R + V L +++ HGK + A
Sbjct: 449 RSSLINMYSKCGSIKEASMIFGETD-RDDIVSLTAMINGYAEHGKSKEA 496
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 151/352 (42%), Gaps = 43/352 (12%)
Query: 74 ARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQLFIEMRQL--GLSIDXXXXXXXXX 127
AR++FD++P H D V +T++I+R E+L LF MR + +S D
Sbjct: 59 ARQVFDKMP--HGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLK 116
Query: 128 XXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVS 187
+ + G +H+ VK V ++++D+Y + G + ++ +VF E+ + V+
Sbjct: 117 ACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVT 176
Query: 188 WTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCG 247
WT ++ G+V + G F M E++ T
Sbjct: 177 WTAIITGLVHAGRYKEGLTYFSEMSRSEELSDT--------------------------- 209
Query: 248 FELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
T L AC+ V G+ +H + G+ + V SL MY +CG +
Sbjct: 210 -----YTFAIALKACAGLRQVKYGKAIHTHVI-VRGFVTTLCVANSLATMYTECGEMQDG 263
Query: 308 LVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHS 366
L +F+NMS R+VV+W +++ G V+ F M +V P+ TF ++ SAC+
Sbjct: 264 LCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 367 GLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
+ G Q ++ S+ + + M+ + G+L A +L + M R
Sbjct: 324 SRLVWGEQLHCNVLSL-GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 136/333 (40%), Gaps = 41/333 (12%)
Query: 192 LDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEM-VFGCGFEL 250
L ++ + + R VFD MP + V+WT +I YV + EA L M V
Sbjct: 47 LRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSP 106
Query: 251 NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVV 310
+ L VL AC QS ++ G +H +AVK V VG+SL+DMY + G+I + V
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLS-SVYVGSSLLDMYKRVGKIDKSCRV 165
Query: 311 FKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLV 369
F M RN V W A++ GL G K + F M E D TF L AC+ V
Sbjct: 166 FSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQV 225
Query: 370 EQGRQYF---------------RDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLV-- 412
+ G+ L ++Y E++ C+ + + + L+V
Sbjct: 226 KYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAY 285
Query: 413 ----------------KKMPIRPNEVVLGSLLGSCYAHGKLQLAEKI---VRELVEMDPL 453
+ + PNE S+ +C + +L E++ V L D L
Sbjct: 286 KRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSL 345
Query: 454 NTEYHILLSNMYALSGKVEKANSFRRVLKKRGI 486
+ ++ MY+ G + A+ + ++ R I
Sbjct: 346 SVSNSMM--KMYSTCGNLVSASVLFQGMRCRDI 376
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 246/466 (52%), Gaps = 48/466 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+ H V G N F+ + + ++Y P AR++FDE+P+ D + +TA++
Sbjct: 182 GRCFHGVVITHGF--EWNHFISSTLAYLYGVNREPVDARRVFDEMPEP--DVICWTAVLS 237
Query: 97 RCPP----LESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
E+L LF M R GL D L G ++H ++ G G
Sbjct: 238 AFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIG 297
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
V ++++D+Y K G + EAR+V F+GM
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQV-------------------------------FNGM 326
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
++N V+W+ ++ GY NG ++A + +EM E + +VL AC+ V +G
Sbjct: 327 SKKNSVSWSALLGGYCQNGEHEKAIEIFREME-----EKDLYCFGTVLKACAGLAAVRLG 381
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+ +HG V+ G V+V ++L+D+Y K G I A V+ MS RN++ WNA+L LA
Sbjct: 382 KEIHGQYVR-RGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQ 440
Query: 332 HGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+G G+ V F MV++ +KPD ++F+A+L+AC H+G+V++GR YF + Y I+P E
Sbjct: 441 NGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTE 500
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKL-QLAEKIVRELVE 449
HY+CM+DLLGRAG EEAE L+++ R + + G LLG C A+ ++AE+I + ++E
Sbjct: 501 HYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMME 560
Query: 450 MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
++P ++LLSNMY G+ A + R+++ +RG+ K G S I
Sbjct: 561 LEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 209/467 (44%), Gaps = 60/467 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPS--HARKLFDEIPQSHKDSVDYTAL 94
G Q HA +GL + N+ N++L +Y P R++FD + KD++ +T++
Sbjct: 80 GIQFHAHVVKSGLETDRNV--GNSLLSLYFKLG-PGMRETRRVFD--GRFVKDAISWTSM 134
Query: 95 ----IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
+ +++L++F+EM GL + LG+ +G H V+ GF
Sbjct: 135 MSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGF 194
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
+ + + LY +AR+VF E+ P V+ WT VL K
Sbjct: 195 EWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK------------- 241
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
N +EA L M G G + T +VL+AC +
Sbjct: 242 ------------------NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
G+ +HG + G V+V +SL+DMY KCG + A VF MS++N V+W+A+LGG
Sbjct: 284 GKEIHGKLI-TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYC 342
Query: 331 MHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIR---P 387
+G + +++F M E+ D F +L AC+ V G++ + Y R
Sbjct: 343 QNGEHEKAIEIFREMEEK---DLYCFGTVLKACAGLAAVRLGKE----IHGQYVRRGCFG 395
Query: 388 EIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+ + ++DL G++G ++ A + KM IR N + ++L + +G+ + A ++
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEAVSFFNDM 454
Query: 448 VEMDPLNTEYHILLSNMYAL--SGKVEKA-NSFRRVLKKRGIRKVPG 491
V+ + +Y ++ + A +G V++ N F + K GI+ PG
Sbjct: 455 VK-KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIK--PG 498
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 207/359 (57%), Gaps = 35/359 (9%)
Query: 138 GPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVK 197
G +H +K GF V +A++ +YV G L ARK+F
Sbjct: 153 GDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLF-------------------- 192
Query: 198 WEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCS 257
D MP R+ V +T M GYV G + +EM + GF L+ V + S
Sbjct: 193 -----------DDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYS-GFALDSVVMVS 240
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR 317
+L AC Q G + G+ VHG+ ++ LG+ +G ++ DMY KC + A VF NMSRR
Sbjct: 241 LLMACGQLGALKHGKSVHGWCIRRCSC-LGLNLGNAITDMYVKCSILDYAHTVFVNMSRR 299
Query: 318 NVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYF 376
+V++W++++ G + G +F M++E ++P+AVTF+ +LSAC+H GLVE+ YF
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF 359
Query: 377 RDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGK 436
R ++ Y I PE++HYA + D + RAG LEEAE ++ MP++P+E V+G++L C +G
Sbjct: 360 RLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGN 418
Query: 437 LQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
+++ E++ REL+++ P Y++ L+ +Y+ +G+ ++A S R+ +K++ I KVPG SSI
Sbjct: 419 VEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 157/396 (39%), Gaps = 102/396 (25%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTAL-- 94
G +H + G SS LF+ +A++ +Y HARKLFD++P +DSV YTA+
Sbjct: 153 GDLIHVLCLKLGFSSS--LFVSSALVIMYVDMGKLLHARKLFDDMPV--RDSVLYTAMFG 208
Query: 95 --IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+++ + L +F EM G ++D +LG G VH G
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVH--------GW 260
Query: 153 CTRVC--------NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESG 204
C R C NA+ D+YVK +L A
Sbjct: 261 CIRRCSCLGLNLGNAITDMYVKCSILDYAH------------------------------ 290
Query: 205 RVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQ 264
VF M R+ ++W+ +I+GY +G +F L EM+ G E N VT VLSAC+
Sbjct: 291 -TVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML-KEGIEPNAVTFLGVLSACA- 347
Query: 265 SGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA--- 321
HG G + + + F+ M N+V
Sbjct: 348 ----------HG-------------------------GLVEKSWLYFRLMQEYNIVPELK 372
Query: 322 -WNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLE 380
+ +V ++ G+ + M VKPD A+LS C G VE G + R+L
Sbjct: 373 HYASVADCMSRAGLLEEAEKFLEDM--PVKPDEAVMGAVLSGCKVYGNVEVGERVAREL- 429
Query: 381 SVYEIRP-EIEHYACMVDLLGRAGHLEEAELLVKKM 415
+++P + +Y + L AG +EAE L + M
Sbjct: 430 --IQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWM 463
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 2/169 (1%)
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
VF MP RN +W ++I + +GF ++ L M + TL +L ACS S
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVL 326
+ G +H +K +G+ + V ++LV MY G++ A +F +M R+ V + A+
Sbjct: 149 EAKSGDLIHVLCLK-LGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 327 GGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQ 374
GG G + MF M D+V ++LL AC G ++ G+
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKS 256
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 288 VMVGTSLVDMYAKCGRI-SIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV 346
V++ + LV Y+K + +L VF +M RN+ +WN ++G + G +D+F M
Sbjct: 66 VVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMW 125
Query: 347 EE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIR----PEIEHYACMVDLLG 400
E V+PD T +L ACS S + G DL V ++ + + +V +
Sbjct: 126 RESCVRPDDFTLPLILRACSASREAKSG-----DLIHVLCLKLGFSSSLFVSSALVIMYV 180
Query: 401 RAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
G L A L MP+R + V+ ++ G G+ L + RE+
Sbjct: 181 DMGKLLHARKLFDDMPVR-DSVLYTAMFGGYVQQGEAMLGLAMFREM 226
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 240/467 (51%), Gaps = 28/467 (5%)
Query: 39 QLHAVATVTGLL------SSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYT 92
QLH+ T +G L +S LFL N +L Y+ P HA L+D++ + H S
Sbjct: 55 QLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNK 114
Query: 93 ALIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+L PP +S ++ R +G +H +K GF
Sbjct: 115 SL----PPFDSFTYLFLLK--------------ASSNPRFPSLLLGIGLHGLTLKLGFES 156
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V A++ +Y+ G + +A KVF E+ + V+W V++ G+ E + MP
Sbjct: 157 HVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMP 216
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
R V+WT +I GY KEA L MV + N +T+ ++L A GD+ +
Sbjct: 217 NRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCG 276
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNM--SRRNVVAWNAVLGGLA 330
VH + K + V SL+D YAKCG I A F + R+N+V+W ++ A
Sbjct: 277 SVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFA 336
Query: 331 MHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQG-RQYFRDLESVYEIRPE 388
+HGMGK V MF M +KP+ VT +++L+ACSH GL E+ ++F + + Y+I P+
Sbjct: 337 IHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPD 396
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
++HY C+VD+L R G LEEAE + ++PI VV LLG+C + +LAE++ R+L+
Sbjct: 397 VKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLM 456
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
E++ + ++L+SN++ +G+ A FR+ + RG+ K+PG S +
Sbjct: 457 ELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 245/467 (52%), Gaps = 47/467 (10%)
Query: 37 GKQLHAVATVTGL-LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI 95
GK H +G+ LSS L ++L +Y C S+AR++F+E SH D V +TA+I
Sbjct: 261 GKWFHGCLVKSGIELSSC---LVTSLLDMYVKCGDISNARRVFNE--HSHVDLVMWTAMI 315
Query: 96 ----RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
E+L LF +M+ + + + + + +G VH +K G
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW 375
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
T V NA++ +Y K +A+ VF E+E
Sbjct: 376 D-TNVANALVHMYAKCYQNRDAKYVF-EME------------------------------ 403
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
E++ VAW +I G+ NG EA +L M N VT+ S+ SAC+ G + VG
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMN-SESVTPNGVTVASLFSACASLGSLAVG 462
Query: 272 RWVHGFAVKAMGW--DLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
+H ++VK +G+ V VGT+L+D YAKCG A ++F + +N + W+A++GG
Sbjct: 463 SSLHAYSVK-LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 330 AMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
G +++F M++ + KP+ TF ++LSAC H+G+V +G++YF + Y P
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
+HY CMVD+L RAG LE+A +++KMPI+P+ G+ L C H + L E ++++++
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 641
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
++ P + Y++L+SN+YA G+ +A R ++K+RG+ K+ G S++
Sbjct: 642 DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 190/444 (42%), Gaps = 77/444 (17%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR- 96
+Q H V T GL+ ++ + ++ +Y AR +FD+IP+ D + ++R
Sbjct: 61 RQSHGVLTGNGLMG--DISIATKLVSLYGFFGYTKDARLVFDQIPE--PDFYLWKVMLRC 116
Query: 97 ---RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKF-GFGK 152
+E ++L+ + + G D L D + G ++H +VK F
Sbjct: 117 YCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN 176
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V ++D+Y K G + A KVF +I + +VV WT ++ G VK + E G V+F+ M
Sbjct: 177 V--VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
E N +GN +T + C+ LSA Q G+
Sbjct: 235 ENN----------VLGNEYTYGTL----------------IMACTKLSALHQ------GK 262
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
W HG VK+ G +L + TSL+DMY KCG IS A VF S ++V W A++ G +
Sbjct: 263 WFHGCLVKS-GIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYF--------------- 376
G + +F M E+KP+ VT ++LS C +E GR
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVAN 381
Query: 377 ------------RDLESVYEIRPE--IEHYACMVDLLGRAGHLEEAELLVKKM---PIRP 419
RD + V+E+ E I + ++ + G + EA L +M + P
Sbjct: 382 ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP 441
Query: 420 NEVVLGSLLGSCYAHGKLQLAEKI 443
N V + SL +C + G L + +
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSL 465
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 232/442 (52%), Gaps = 41/442 (9%)
Query: 59 NAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMRQLG 114
N++L +Y L S A KLF I + T L +C ++ ++LF +++ LG
Sbjct: 370 NSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCH-VKCIELFRKIQNLG 428
Query: 115 LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEAR 174
+ ID +G +G +H VVK V N+++DLY K G L A
Sbjct: 429 IEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAW 488
Query: 175 KVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
++F E + N + W MI YV +++
Sbjct: 489 RMFCEADT--------------------------------NVITWNAMIASYVHCEQSEK 516
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
A L MV F+ + +TL ++L AC +G + G+ +H + + ++ + + +L
Sbjct: 517 AIALFDRMV-SENFKPSSITLVTLLMACVNTGSLERGQMIHRY-ITETEHEMNLSLSAAL 574
Query: 295 VDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDA 353
+DMYAKCG + + +F ++++ V WN ++ G MHG ++ + +F M E +VKP
Sbjct: 575 IDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTG 634
Query: 354 VTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVK 413
TF+ALLSAC+H+GLVEQG++ F + Y+++P ++HY+C+VDLL R+G+LEEAE V
Sbjct: 635 PTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVM 693
Query: 414 KMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEK 473
MP P+ V+ G+LL SC HG+ ++ ++ V DP N Y+I+L+NMY+ +GK E+
Sbjct: 694 SMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEE 753
Query: 474 ANSFRRVLKKRGIRKVPGMSSI 495
A R ++++ G+ K G S +
Sbjct: 754 AERAREMMRESGVGKRAGHSVV 775
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 212/481 (44%), Gaps = 80/481 (16%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ LH A GL SS F+++++ Y+ PS A F E+ +D +T++I
Sbjct: 249 GRCLHGFAVKNGLASSK--FVQSSMFSFYSKSGNPSEAYLSFRELGD--EDMFSWTSIIA 304
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R ES +F EM+ G+ D ++ G H V++ F
Sbjct: 305 SLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSL 364
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ VCN+++ +Y KF LL A K+F I
Sbjct: 365 DSTVCNSLLSMYCKFELLSVAEKLFCRIS------------------------------E 394
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
E N+ AW M+ GY + L ++ + G E++ + SV+S+CS G V +G+
Sbjct: 395 EGNKEAWNTMLKGYGKMKCHVKCIELFRK-IQNLGIEIDSASATSVISSCSHIGAVLLGK 453
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H + VK DL + V SL+D+Y K G +++A +F + NV+ WNA++
Sbjct: 454 SLHCYVVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHC 511
Query: 333 GMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDL-ESVYEIRPEIE 390
+ + +F MV E KP ++T + LL AC ++G +E+G+ R + E+ +E+ +
Sbjct: 512 EQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLS 571
Query: 391 HYACMVDLLGRAGHLEEAELL----------------------------------VKKMP 416
A ++D+ + GHLE++ L +++
Sbjct: 572 --AALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESD 629
Query: 417 IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD-PLNTEYHILLSNMYALSGKVEKAN 475
++P +LL +C G ++ +K+ ++ + D N +++ L ++ + SG +E+A
Sbjct: 630 VKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAE 689
Query: 476 S 476
S
Sbjct: 690 S 690
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 148/351 (42%), Gaps = 59/351 (16%)
Query: 41 HAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLF-----------DEIPQSHKDSV 89
H +TG LS N+F+ + ++ YA+ P+ + ++F + I ++H +
Sbjct: 46 HNALIITGGLS-ENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNG 104
Query: 90 DYTALIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG 149
DY SL F M G S D L +VG VH V+K G
Sbjct: 105 DYA---------RSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG 155
Query: 150 -FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVF 208
F + T V + + Y K G L +A +VF
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDAC-------------------------------LVF 184
Query: 209 DGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFEL---NCVTLCSVLSACSQS 265
D MP+R+ VAWT +I G+V NG ++ L +M G ++ N TL ACS
Sbjct: 185 DEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM-HSAGSDVDKPNPRTLECGFQACSNL 243
Query: 266 GDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAV 325
G + GR +HGFAVK G V +S+ Y+K G S A + F+ + ++ +W ++
Sbjct: 244 GALKEGRCLHGFAVKN-GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSI 302
Query: 326 LGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQY 375
+ LA G + DMF M + + PD V L++ LV QG+ +
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAF 353
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 156/469 (33%), Positives = 235/469 (50%), Gaps = 46/469 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GK +H T G S +L ++ IL VYA +AR++FD K+ V ++A+I
Sbjct: 224 GKAVHGYCTRMGF--SNDLVVKTGILDVYAKSKCIIYARRVFD--LDFKKNEVTWSAMIG 279
Query: 97 RCPPLESL----QLFIEM--RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
E + ++F +M + R GD + G VH VK GF
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
V N ++ Y K+G L +A + F EI + V+S+
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNS-------------------- 379
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
+I G V N +E+F L EM G + TL VL+ACS +
Sbjct: 380 -----------LITGCVVNCRPEESFRLFHEMRTS-GIRPDITTLLGVLTACSHLAALGH 427
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
G HG+ V G+ + + +L+DMY KCG++ +A VF M +R++V+WN +L G
Sbjct: 428 GSSCHGYCV-VHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFG 486
Query: 331 MHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDL-ESVYEIRPE 388
+HG+GK + +F M E V PD VT +A+LSACSHSGLV++G+Q F + + + P
Sbjct: 487 IHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR 546
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
I+HY CM DLL RAG+L+EA V KMP P+ VLG+LL +C+ + +L ++ +++
Sbjct: 547 IDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQ 606
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV 497
+ TE +LLSN Y+ + + E A R + KKRG+ K PG S + V
Sbjct: 607 SLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 217/509 (42%), Gaps = 89/509 (17%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GK +H+ + + ++++ A++ YA C A K+FDE+P+ +D V + A+I
Sbjct: 122 GKLIHSHVNCSDF--ATDMYVCTALVDFYAKCGELEMAIKVFDEMPK--RDMVAWNAMIS 177
Query: 97 ----RCPPLESLQLFIEMRQL-GLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
C + + LF++MR++ GLS + R G G VH + GF
Sbjct: 178 GFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFS 237
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGV-ESGRVVFDG 210
V ++D+Y K + AR+VF + V+W+ ++ G V+ E + E+G V F
Sbjct: 238 NDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM 297
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
+ N T + +G +L C++ GD+
Sbjct: 298 LVNDNVAMVTPVAIGL-------------------------------ILMGCARFGDLSG 326
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
GR VH +AVKA G+ L + V +++ YAK G + A F + ++V+++N+++ G
Sbjct: 327 GRCVHCYAVKA-GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCV 385
Query: 331 MHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGR---------------- 373
++ + +F M ++PD T + +L+ACSH + G
Sbjct: 386 VNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTS 445
Query: 374 --QYFRDL----------ESVYEI--RPEIEHYACMVDLLGRAGHLEEAELLVKKMP--- 416
D+ + V++ + +I + M+ G G +EA L M
Sbjct: 446 ICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETG 505
Query: 417 IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD----PLNTEYHILLSNMYALSGKVE 472
+ P+EV L ++L +C G + +++ + D P Y+ ++++ A +G ++
Sbjct: 506 VNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC-MTDLLARAGYLD 564
Query: 473 KANSFRRVLKKRGIRKVPGMSSIYVDGQL 501
+A F + K+P I V G L
Sbjct: 565 EAYDF--------VNKMPFEPDIRVLGTL 585
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 144/344 (41%), Gaps = 40/344 (11%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+ +H L S + L N + +YA+C AR +FDEIP + + + +IR
Sbjct: 18 GQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIR 76
Query: 97 RCPPLE----SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ +L L+ +M G+ L + G +HS V F
Sbjct: 77 AYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFAT 136
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
VC A++D Y K G L A KVF E MP
Sbjct: 137 DMYVCTALVDFYAKCGELEMAIKVFDE-------------------------------MP 165
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+R+ VAW MI G+ + + L +M G N T+ + A ++G + G+
Sbjct: 166 KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
VHG+ + MG+ ++V T ++D+YAK I A VF ++N V W+A++GG +
Sbjct: 226 AVHGYCTR-MGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 333 GMGKAVVDMFPHMVEEVKPDAVTFMA---LLSACSHSGLVEQGR 373
M K ++F M+ VT +A +L C+ G + GR
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGR 328
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 155/532 (29%), Positives = 268/532 (50%), Gaps = 53/532 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GKQ HA+A V G+ + L ++L+ Y L +A +FD + + KD V + +I
Sbjct: 293 GKQSHAIAIVNGM--ELDNILGTSLLNFYCKVGLIEYAEMVFDRMFE--KDVVTWNLIIS 348
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
++ +++ + MR L D R + +G +V ++ F
Sbjct: 349 GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES 408
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFG---------------------------------- 178
+ + VMD+Y K G + +A+KVF
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ 468
Query: 179 -EIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEVAWTVMIVGYVGNGFTK 233
E P+V++W +++ +++ V+ + +F M N ++WT M+ G V NG ++
Sbjct: 469 LEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSE 528
Query: 234 EAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTS 293
EA L++M G N ++ LSAC+ + +GR +HG+ ++ + V + TS
Sbjct: 529 EAILFLRKMQ-ESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETS 587
Query: 294 LVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEV--KP 351
LVDMYAKCG I+ A VF + + NA++ A++G K + ++ + E V KP
Sbjct: 588 LVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL-EGVGLKP 646
Query: 352 DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELL 411
D +T +LSAC+H+G + Q + F D+ S ++P +EHY MVDLL AG E+A L
Sbjct: 647 DNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRL 706
Query: 412 VKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKV 471
+++MP +P+ ++ SL+ SC K +L + + R+L+E +P N+ ++ +SN YA+ G
Sbjct: 707 IEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSW 766
Query: 472 EKANSFRRVLKKRGIRKVPGMSSIYVDGQ--LHQFSAGDKSHPRTSEIYLKL 521
++ R ++K +G++K PG S I + G+ +H F A DK+H R +EI + L
Sbjct: 767 DEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 136/576 (23%), Positives = 264/576 (45%), Gaps = 75/576 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTAL-- 94
G+ +H +GL +F+ +++ +Y C + A K+FDEIP +++V + AL
Sbjct: 192 GRGVHGYVVKSGL--EDCVFVASSLADMYGKCGVLDDASKVFDEIPD--RNAVAWNALMV 247
Query: 95 --IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
++ E+++LF +MR+ G+ +G G Q H+ + G
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL 307
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ ++++ Y K GL +E +VFD M
Sbjct: 308 DNILGTSLLNFYCKVGL-------------------------------IEYAEMVFDRMF 336
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
E++ V W ++I GYV G ++A ++ + M + +CVTL +++SA +++ ++ +G+
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE-KLKYDCVTLATLMSAAARTENLKLGK 395
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
V + ++ ++ +++ ++++DMYAKCG I A VF + ++++ WN +L A
Sbjct: 396 EVQCYCIRH-SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAES 454
Query: 333 GMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G+ + +F M +E V P+ +T+ ++ + +G V++ + F ++S I P +
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS-SGIIPNLIS 513
Query: 392 YACMVDLLGRAGHLEEAELLVKKMP---IRPNEVVLGSLLGSCYAHGKLQLAEK----IV 444
+ M++ + + G EEA L ++KM +RPN + L +C L + I+
Sbjct: 514 WTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYII 573
Query: 445 RELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVP---GMSSIY-VDGQ 500
R L ++ E ++ +MYA G + KA +V + ++P M S Y + G
Sbjct: 574 RNLQHSSLVSIETSLV--DMYAKCGDINKA---EKVFGSKLYSELPLSNAMISAYALYGN 628
Query: 501 LHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQ 560
L + A +S + LK D++ T VL C+ +GD +A+E
Sbjct: 629 LKEAIALYRS---LEGVGLKPDNI------------TITNVLSACNHAGDINQAIEIFTD 673
Query: 561 VLFAHSEKLAL-CFGLISTSSGSPLYIFKNLRICQD 595
++ S K L +GL+ S K LR+ ++
Sbjct: 674 IVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 709
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 210/471 (44%), Gaps = 59/471 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQ+HA G + N ++ ++ YA C A LF ++ ++ + A+I
Sbjct: 89 GKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKL--RVRNVFSWAAIIG 146
Query: 97 ---RCPPLE-SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R E +L F+EM + + D L G VH VVK G
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLED 206
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
C V +++ D+Y K G+L +A KVF EI P
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEI-------------------------------P 235
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+RN VAW ++VGYV NG +EA L +M G E VT+ + LSA + G V G+
Sbjct: 236 DRNAVAWNALMVGYVQNGKNEEAIRLFSDM-RKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
H A+ G +L ++GTSL++ Y K G I A +VF M ++VV WN ++ G
Sbjct: 295 QSHAIAI-VNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 333 GMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G+ + + M M +E++K D VT L+SA + + ++ G++ Y IR E
Sbjct: 354 GLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV-----QCYCIRHSFES 408
Query: 392 ----YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+ ++D+ + G + +A+ + + + ++ +LL A+ + L+ + +R
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLA---AYAESGLSGEALRLF 464
Query: 448 VEMDPLNTEYHILLSNMYALS----GKVEKANSFRRVLKKRGIRKVPGMSS 494
M +++ N+ LS G+V++A ++ GI +P + S
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGI--IPNLIS 513
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 112/242 (46%), Gaps = 32/242 (13%)
Query: 134 DPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLD 193
D + G Q+H+ ++K G D Y AR + IE V+ +
Sbjct: 85 DLSTGKQIHARILKNG------------DFY--------ARNEY--IETKLVIFYA---- 118
Query: 194 GVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCV 253
K + +E V+F + RN +W +I G + A EM+ F N V
Sbjct: 119 ---KCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFV 175
Query: 254 TLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKN 313
+ +V AC GR VHG+ VK+ G + V V +SL DMY KCG + A VF
Sbjct: 176 -VPNVCKACGALKWSRFGRGVHGYVVKS-GLEDCVFVASSLADMYGKCGVLDDASKVFDE 233
Query: 314 MSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQG 372
+ RN VAWNA++ G +G + + +F M ++ V+P VT LSA ++ G VE+G
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 373 RQ 374
+Q
Sbjct: 294 KQ 295
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 233/469 (49%), Gaps = 47/469 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTAL-- 94
G+ LH +A +G + +L RNA++H Y C S ARK+FDE+PQS D+V ++ L
Sbjct: 144 GEGLHGIALRSGFMVFTDL--RNALIHFYCVCGKISDARKVFDEMPQS-VDAVTFSTLMN 200
Query: 95 --IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
++ +L LF MR+ + ++ LGD + H +K G
Sbjct: 201 GYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL 260
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ A++ +Y K G G+ S R +FD
Sbjct: 261 DLHLITALIGMYGKTG-------------------------------GISSARRIFDCAI 289
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
++ V W MI Y G +E WLL++M + + N T +LS+C+ S VGR
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE-KMKPNSSTFVGLLSSCAYSEAAFVGR 348
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
V ++ L ++GT+LVDMYAK G + A+ +F M ++V +W A++ G H
Sbjct: 349 TVADL-LEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAH 407
Query: 333 GMGKAVVDMFPHMVEE---VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI 389
G+ + V +F M EE V+P+ +TF+ +L+ACSH GLV +G + F+ + Y P++
Sbjct: 408 GLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKV 467
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE 449
EHY C+VDLLGRAG LEEA L++ +PI + +LL +C +G L E ++ L E
Sbjct: 468 EHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAE 527
Query: 450 MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVD 498
M + ILL+ +A++G EK S L K RK G S+I ++
Sbjct: 528 MGETHPADAILLAGTHAVAGNPEK--SLDNELNKG--RKEAGYSAIEIE 572
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 180/427 (42%), Gaps = 84/427 (19%)
Query: 100 PLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNA 159
P + +F ++R GL++D R ++G +H ++ GF T + NA
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNA 165
Query: 160 VMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER-NEVA 218
++ Y G + +ARK VFD MP+ + V
Sbjct: 166 LIHFYCVCGKISDARK-------------------------------VFDEMPQSVDAVT 194
Query: 219 WTVMIVGYVGNGFTKEAFWL-LKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
++ ++ GY+ +K+A L L ++ +N TL S LSA S GD+ H
Sbjct: 195 FSTLMNGYL--QVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVL 252
Query: 278 AVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKA 337
+K +G DL + + T+L+ MY K G IS A +F R++VV WN ++ A G+ +
Sbjct: 253 CIK-IGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEE 311
Query: 338 VVDMFPHM-VEEVKPDAVTFMALLSACSHS------------------------------ 366
V + M E++KP++ TF+ LLS+C++S
Sbjct: 312 CVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVD 371
Query: 367 -----GLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM-----P 416
GL+E+ + F ++ +++ + M+ G G EA L KM
Sbjct: 372 MYAKVGLLEKAVEIFNRMKD-----KDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCK 426
Query: 417 IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLN--TEYHILLSNMYALSGKVEKA 474
+RPNE+ +L +C G + + + +VE E++ + ++ +G++E+A
Sbjct: 427 VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Query: 475 NSFRRVL 481
R L
Sbjct: 487 YELIRNL 493
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 238/465 (51%), Gaps = 35/465 (7%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G +H TG N+++ +LH+Y C ++ ++F++IPQ + V + +LI
Sbjct: 126 GSCVHGFVVKTGF--EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW--NVVAWGSLIS 181
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
++++ F EM+ G+ + R D G H + GF
Sbjct: 182 GFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF-- 239
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
D Y +++ F +V+ T ++D K + + R +FDGMP
Sbjct: 240 ---------DPYF------QSKVGF------NVILATSLIDMYAKCGDLRTARYLFDGMP 278
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
ER V+W +I GY NG +EA + +M+ G + VT SV+ A G +G+
Sbjct: 279 ERTLVSWNSIITGYSQNGDAEEALCMFLDML-DLGIAPDKVTFLSVIRASMIQGCSQLGQ 337
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H + K G+ + +LV+MYAK G A F+++ +++ +AW V+ GLA H
Sbjct: 338 SIHAYVSKT-GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 396
Query: 333 GMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
G G + +F M E+ PD +T++ +L ACSH GLVE+G++YF ++ ++ + P +E
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVE 456
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HY CMVD+L RAG EEAE LVK MP++PN + G+LL C H L+L ++I + E
Sbjct: 457 HYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEP 516
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
+ L + ++LLSN+YA +G+ R +K + + KV G SS+
Sbjct: 517 EELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 197/466 (42%), Gaps = 98/466 (21%)
Query: 72 SHARKLFDEI--PQSHKDSVDYTALIR---RCP-PLESLQLFIEMRQLGLSIDXXXXXXX 125
S+AR +F+ I P + + ++IR P P ++L + EM + G S D
Sbjct: 58 SYARSVFESIDCPSVYI----WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYV 113
Query: 126 XXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSV 185
L D G VH VVK GF V ++ +Y+ G + +VF +I
Sbjct: 114 LKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI----- 168
Query: 186 VSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFG 245
P+ N VAW +I G+V N +A +EM
Sbjct: 169 --------------------------PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 246 CGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWD--------LGVMVGTSLVDM 297
G + N + +L AC + D+ G+W HGF ++ +G+D V++ TSL+DM
Sbjct: 203 -GVKANETIMVDLLVACGRCKDIVTGKWFHGF-LQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 298 YAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTF 356
YAKCG + A +F M R +V+WN+++ G + +G + + MF M++ + PD VTF
Sbjct: 261 YAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTF 320
Query: 357 MALLSA-----CSH------------------------------SGLVEQGRQYFRDLES 381
++++ A CS +G E ++ F DLE
Sbjct: 321 LSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE- 379
Query: 382 VYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLG-SLLGSCYAHGKLQLA 440
+ + + ++ L GH EA + ++M + N G + LG YA + L
Sbjct: 380 ----KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLV 435
Query: 441 EKIVRELVEMDPLN-----TEYHILLSNMYALSGKVEKANSFRRVL 481
E+ R EM L+ E++ + ++ + +G+ E+A + +
Sbjct: 436 EEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTM 481
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 218/384 (56%), Gaps = 8/384 (2%)
Query: 140 QVHSGVVKFGF---GKCTRVCNAVMDLYVKFGLLGEARKVF-GEIEVPSVVSWTVVLDGV 195
+VH VK G + ++ NA++D Y K G + A K+F G E ++VS+ +L G
Sbjct: 453 EVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGY 512
Query: 196 VKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTL 255
V + +++F M + W++M+ Y + EA + +E + G N VT+
Sbjct: 513 VNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFRE-IQARGMRPNTVTI 571
Query: 256 CSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
++L C+Q + + R HG+ ++ D + + +L+D+YAKCG + A VF++ +
Sbjct: 572 MNLLPVCAQLASLHLVRQCHGYIIRGGLGD--IRLKGTLLDVYAKCGSLKHAYSVFQSDA 629
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQ 374
RR++V + A++ G A+HG GK + ++ HM E +KPD V +L+AC H+GL++ G Q
Sbjct: 630 RRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQ 689
Query: 375 YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAH 434
+ + +V+ ++P +E YAC VDL+ R G L++A V +MP+ PN + G+LL +C +
Sbjct: 690 IYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTY 749
Query: 435 GKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSS 494
++ L + L++ + +T H+L+SNMYA K E R ++KK+ ++K G S
Sbjct: 750 NRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSW 809
Query: 495 IYVDGQLHQFSAGDKSHPRTSEIY 518
+ VDGQ + F +GD SHPR I+
Sbjct: 810 LEVDGQRNVFVSGDCSHPRRDSIF 833
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 190/470 (40%), Gaps = 64/470 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACA-LPSHARKLFDEIPQSHKDSVDYTALI 95
GK +H+ GL + + NA++ +YA + A FD I + KD V + A+I
Sbjct: 141 GKSMHSYIIKAGL--EKDTLVGNALVSMYAKFGFIFPDAYTAFDGI--ADKDVVSWNAII 196
Query: 96 RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLG-----DPNV----GPQVHSGVV 146
E+ + R L + L D N+ G Q+HS VV
Sbjct: 197 AGFS--ENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV 254
Query: 147 KFGFGKC-TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGR 205
+ + + VCN+++ Y++ G + EA +F
Sbjct: 255 QRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTR-------------------------- 288
Query: 206 VVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQS 265
M ++ V+W V+I GY N +AF L +V + VT+ S+L C+Q
Sbjct: 289 -----MGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQL 343
Query: 266 GDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAV 325
D+ G+ +H + ++ VG +L+ YA+ G S A F MS +++++WNA+
Sbjct: 344 TDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAI 403
Query: 326 LGGLAMH-GMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYE 384
L A + + + + E + D+VT ++LL C + QG +++ Y
Sbjct: 404 LDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC----INVQGIGKVKEVHG-YS 458
Query: 385 IRPEIEHYA-------CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKL 437
++ + H ++D + G++E A + + R V SLL G
Sbjct: 459 VKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSH 518
Query: 438 QLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIR 487
A+ + E+ D L+ +YA S +A R ++ RG+R
Sbjct: 519 DDAQMLFTEMSTTDLTTWS---LMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 143/353 (40%), Gaps = 43/353 (12%)
Query: 104 LQLFIEMRQL--GLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
L+ F++ +L G D + D G +H V K G C+ V +V+
Sbjct: 4 LRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVL 63
Query: 162 DLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTV 221
++Y K + + +K+F +++ V W +VL G+ V GR
Sbjct: 64 NMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGL----SVSCGR---------------- 103
Query: 222 MIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKA 281
E K M F + + VT VL C + GD G+ +H + +KA
Sbjct: 104 ------------ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKA 151
Query: 282 MGWDLGVMVGTSLVDMYAKCGRI-SIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVD 340
G + +VG +LV MYAK G I A F ++ ++VV+WNA++ G + + M
Sbjct: 152 -GLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFR 210
Query: 341 MFPHMVEE-VKPDAVTFMALLSACS---HSGLVEQGRQYFRDLESVYEIRPEIEHYACMV 396
F M++E +P+ T +L C+ + GRQ + ++ + +V
Sbjct: 211 SFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLV 270
Query: 397 DLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRE 446
R G +EEA L +M + VV+ +C QL +V +
Sbjct: 271 SFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHK 323
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 242/475 (50%), Gaps = 8/475 (1%)
Query: 39 QLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRC 98
Q+HA +G + +R +L + S+ ++ I + + + + A +
Sbjct: 40 QVHARLITSGNFWDSSWAIR--LLKSSSRFGDSSYTVSIYRSIGKLYCANPVFKAYLVSS 97
Query: 99 PPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCN 158
P ++L + ++ + G D + + G H +K G + V N
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 159 AVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVA 218
++M +Y G L A+K+F EI +VSW ++ G+V+ V + +FD MP++N ++
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 219 WTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFA 278
W +MI Y+G + L +EMV GF+ N TL +L+AC +S + GR VH
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRA-GFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 279 VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAV 338
++ + V++ T+L+DMY KC + +A +F ++S RN V WN ++ +HG +
Sbjct: 277 IRTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGG 335
Query: 339 VDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVD 397
+++F M+ ++PD VTF+ +L C+ +GLV QG+ Y+ + ++I+P H CM +
Sbjct: 336 LELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN 395
Query: 398 LLGRAGHLEEAELLVKKMP---IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLN 454
L AG EEAE +K +P + P +LL S G L E I + L+E DPLN
Sbjct: 396 LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLN 455
Query: 455 TEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDK 509
+Y+ LL N+Y+++G+ E N R ++K+R I ++PG + + +H G K
Sbjct: 456 YKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCK 510
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 21/294 (7%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK H A G L ++N+++H+Y C A+KLF EIP+ +D V + ++I
Sbjct: 137 GKMCHGQAIKHG--CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPK--RDIVSWNSIIA 192
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLG--DPNVGPQVHSGVVKFGF 150
R L + +LF EM D LG +P V + +V+ GF
Sbjct: 193 GMVRNGDVLAAHKLFDEMP------DKNIISWNIMISAYLGANNPGVSISLFREMVRAGF 246
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEI----EVPSVVSWTVVLDGVVKWEGVESGRV 206
+++ + L E R V + SVV T ++D K + V R
Sbjct: 247 QGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARR 306
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
+FD + RN+V W VMI+ + +G + L + M+ G + VT VL C+++G
Sbjct: 307 IFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM-LRPDEVTFVGVLCGCARAG 365
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
V G+ + V + ++Y+ G A KN+ +V
Sbjct: 366 LVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVT 419
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 242/491 (49%), Gaps = 47/491 (9%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRR 97
K++H +A G S + ++ + ++ Y+ A+K+FDE+P DSV + AL+
Sbjct: 180 KKVHGLAFKLGFDS--DCYVGSGLVTSYSKFMSVEDAQKVFDELPD-RDDSVLWNALVNG 236
Query: 98 CPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
+ ++L +F +MR+ G+ + GD + G +H VK G G
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 296
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
V NA++D+Y G KW +E +F+ M E
Sbjct: 297 IVVSNALIDMY-----------------------------GKSKW--LEEANSIFEAMDE 325
Query: 214 RNEVAWTVMIV--GYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
R+ W ++ Y G+ + L E + G + VTL +VL C + + G
Sbjct: 326 RDLFTWNSVLCVHDYCGD---HDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Query: 272 RWVHGFAVKAMGWDL---GVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
R +HG+ + + + + SL+DMY KCG + A +VF +M ++ +WN ++ G
Sbjct: 383 REIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMING 442
Query: 329 LAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRP 387
+ G+ +DMF M VKPD +TF+ LL ACSHSG + +GR + +E+VY I P
Sbjct: 443 YGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILP 502
Query: 388 EIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+HYAC++D+LGRA LEEA L PI N VV S+L SC HG LA + L
Sbjct: 503 TSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRL 562
Query: 448 VEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAG 507
E++P + ++L+SN+Y +GK E+ R ++++ ++K PG S I + +H F G
Sbjct: 563 HELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTG 622
Query: 508 DKSHPRTSEIY 518
+++HP I+
Sbjct: 623 NQTHPEFKSIH 633
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 173/393 (44%), Gaps = 51/393 (12%)
Query: 37 GKQLHAVATVTGLLS-SPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI 95
G+Q+H G L SP +++++YA C L A +F S +D Y ALI
Sbjct: 79 GQQIHGFMVRKGFLDDSPRA--GTSLVNMYAKCGLMRRAVLVF---GGSERDVFGYNALI 133
Query: 96 R----RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
PL++++ + EMR G+ D + +V +VH K GF
Sbjct: 134 SGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFD 192
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
D YV GL V S++ K+ VE + VFD +
Sbjct: 193 S---------DCYVGSGL---------------VTSYS-------KFMSVEDAQKVFDEL 221
Query: 212 PERNE-VAWTVMIVGYVGNGFTKEAFWLLKEM-VFGCGFELNCVTLCSVLSACSQSGDVC 269
P+R++ V W ++ GY ++A + +M G G + +T SVLSA + SGD+
Sbjct: 222 PDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTIT--SVLSAFTVSGDID 279
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
GR +HG AVK G ++V +L+DMY K + A +F+ M R++ WN+VL
Sbjct: 280 NGRSIHGLAVKT-GSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVH 338
Query: 330 AMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQY--FRDLESVYEIR 386
G + +F M+ ++PD VT +L C + QGR+ + + + +
Sbjct: 339 DYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRK 398
Query: 387 PEIEH-YACMVDLLGRAGHLEEAELLVKKMPIR 418
E + ++D+ + G L +A ++ M ++
Sbjct: 399 SSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK 431
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 113/240 (47%), Gaps = 11/240 (4%)
Query: 251 NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVV 310
N T + L C+Q D G+ +HGF V+ D GTSLV+MYAKCG + A++V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 311 FKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLV 369
F S R+V +NA++ G ++G ++ + M + PD TF +LL L
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 370 EQGRQYFRDLESVYEIRPEIEHY--ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSL 427
+ + + +++ + + Y + +V + +E+A+ + ++P R + V+ +L
Sbjct: 178 DVKKVH----GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNAL 233
Query: 428 LGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLS--NMYALSGKVEKANSFRRVLKKRG 485
+ + + A + ++ E + + H + S + + +SG ++ S + K G
Sbjct: 234 VNGYSQIFRFEDALLVFSKMRE-EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTG 292
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 182/468 (38%), Gaps = 96/468 (20%)
Query: 138 GPQVHSGVVKFGF-GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVV 196
G Q+H +V+ GF R +++++Y K GL+ A VFG
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG----------------- 121
Query: 197 KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
ER+ + +I G+V NG +A +EM G + T
Sbjct: 122 ---------------SERDVFGYNALISGFVVNGSPLDAMETYREMR-ANGILPDKYTFP 165
Query: 257 SVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNM-S 315
S+L S + ++ + VHG A K +G+D VG+ LV Y+K + A VF +
Sbjct: 166 SLLKG-SDAMELSDVKKVHGLAFK-LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPD 223
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQ 374
R + V WNA++ G + + + +F M EE V T ++LSA + SG ++ GR
Sbjct: 224 RDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRS 283
Query: 375 YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP------------------ 416
L +I ++D+ G++ LEEA + + M
Sbjct: 284 -IHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCG 342
Query: 417 ----------------IRPNEVVLGSLLGSCYAHGKLQLAEK-----IVRELVEMDPLNT 455
IRP+ V L ++L +C L+ + IV L+ N
Sbjct: 343 DHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNE 402
Query: 456 EYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTS 515
H L +MY G + A R V ++ +I ++G Q S G
Sbjct: 403 FIHNSLMDMYVKCGDLRDA---RMVFDSMRVKDSASW-NIMINGYGVQ-SCG-------- 449
Query: 516 EIYLKLDDMICRLRLAGYVPN--TTCQVLFGCSSSGDCTEALEEVEQV 561
E+ L + +CR AG P+ T +L CS SG E + Q+
Sbjct: 450 ELALDMFSCMCR---AGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM 494
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 244/485 (50%), Gaps = 60/485 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+ LHA +G+ + + ++ Y C ARK+FDE+P+ +D +I
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAK--LVTFYVECGKVLDARKVFDEMPK--RDISGCVVMIG 90
Query: 97 RCPP----LESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
C ESL F EM + GL +D L D G +H V+KF +
Sbjct: 91 ACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYES 150
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDG------------------ 194
+ ++++D+Y KFG +G ARKVF ++ +V + ++ G
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK 210
Query: 195 -------VVKWEGVESGRVVFDGMPERNE-------------------VAWTVMIVGYVG 228
V+ W + SG F M RNE V+WT +I G V
Sbjct: 211 LLGIKPDVITWNALISG---FSHM--RNEEKVSEILELMCLDGYKPDVVSWTSIISGLVH 265
Query: 229 NGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGV 288
N ++AF K+M+ G N T+ ++L AC+ + G+ +HG++V D G
Sbjct: 266 NFQNEKAFDAFKQML-THGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG- 323
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VE 347
V ++L+DMY KCG IS A+++F+ ++ V +N+++ A HG+ V++F M
Sbjct: 324 FVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEAT 383
Query: 348 EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEE 407
K D +TF A+L+ACSH+GL + G+ F +++ Y I P +EHYACMVDLLGRAG L E
Sbjct: 384 GEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVE 443
Query: 408 AELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYAL 467
A ++K M + P+ V G+LL +C HG ++LA + L E++P N+ +LL+++YA
Sbjct: 444 AYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYAN 503
Query: 468 SGKVE 472
+G E
Sbjct: 504 AGSWE 508
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 242/463 (52%), Gaps = 41/463 (8%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIE 109
++F+ +++L++Y C A LF ++ + +D + +T ++ + L++++ + E
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAK--RDVICWTTMVTGFAQAGKSLKAVEFYRE 207
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
M+ G D LGD +G VH + + G V +++D+Y K G
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGF 267
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ A +VF R++F + V+W +I G+ N
Sbjct: 268 IEVASRVFS--------------------------RMMF-----KTAVSWGSLISGFAQN 296
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVM 289
G +AF + EM GF+ + VTL VL ACSQ G + GR VH + +K D +
Sbjct: 297 GLANKAFEAVVEMQ-SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR--V 353
Query: 290 VGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-E 348
T+L+DMY+KCG +S + +F+++ R+++V WN ++ +HG G+ VV +F M E
Sbjct: 354 TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESN 413
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
++PD TF +LLSA SHSGLVEQG+ +F + + Y+I+P +HY C++DLL RAG +EEA
Sbjct: 414 IEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEA 473
Query: 409 ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALS 468
++ + + +LL C H L + + ++++++P + L+SN +A +
Sbjct: 474 LDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATA 533
Query: 469 GKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
K ++ R++++ + KVPG S+I V+G+L F D SH
Sbjct: 534 NKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 10/255 (3%)
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
+ R VFD +P+R + MIV Y E L +M+ + + T +
Sbjct: 66 ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMI-AEKIQPDSSTFTMTIK 124
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
AC + G V AV G+ V V +S++++Y KCG++ A V+F M++R+V+
Sbjct: 125 ACLSGLVLEKGEAVWCKAVD-FGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDL 379
W ++ G A G V+ + M E D V + LL A G + GR L
Sbjct: 184 CWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 380 -ESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ 438
+ + +E +VD+ + G +E A + +M + V GSL+ +G
Sbjct: 244 YRTGLPMNVVVE--TSLVDMYAKVGFIEVASRVFSRMMFK-TAVSWGSLISGFAQNG--- 297
Query: 439 LAEKIVRELVEMDPL 453
LA K +VEM L
Sbjct: 298 LANKAFEAVVEMQSL 312
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 248/499 (49%), Gaps = 53/499 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEI--PQSHKDSVDYTAL 94
G Q+H + + L + N ++ +YA C + AR++FD+I P + +V L
Sbjct: 289 GSQIHGLCIKSEL--AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGL 346
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
E++ +F +MR G D + + G Q+HS ++K+GF
Sbjct: 347 ANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADL 406
Query: 155 RVCNAVM-------DLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEG-VESGRV 206
VCN+++ DLY F L + R VSW +L ++ E VE R+
Sbjct: 407 TVCNSLLTMYTFCSDLYCCFNLFEDFRNN------ADSVSWNTILTACLQHEQPVEMLRL 460
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
+ +M+V E + +T+ ++L C +
Sbjct: 461 ------------FKLMLVSEC---------------------EPDHITMGNLLRGCVEIS 487
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVL 326
+ +G VH +++K G + L+DMYAKCG + A +F +M R+VV+W+ ++
Sbjct: 488 SLKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
Query: 327 GGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI 385
G A G G+ + +F M ++P+ VTF+ +L+ACSH GLVE+G + + +++ + I
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 386 RPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVR 445
P EH +C+VDLL RAG L EAE + +M + P+ VV +LL +C G + LA+K
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAE 666
Query: 446 ELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFS 505
++++DP N+ H+LL +M+A SG E A R +KK ++K+PG S I ++ ++H F
Sbjct: 667 NILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFF 726
Query: 506 AGDKSHPRTSEIYLKLDDM 524
A D HP +IY L ++
Sbjct: 727 AEDIFHPERDDIYTVLHNI 745
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 148/328 (45%), Gaps = 43/328 (13%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIE 109
+ L N IL +Y C AR++FD +P+ ++ V YT++I + E+++L+++
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPE--RNLVSYTSVITGYSQNGQGAEAIRLYLK 158
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
M Q L D D +G Q+H+ V+K NA++ +YV+F
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ +A +VF G+P ++ ++W+ +I G+
Sbjct: 219 MSDASRVFY-------------------------------GIPMKDLISWSSIIAGFSQL 247
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLG-- 287
GF EA LKEM+ F N S L ACS G +HG +K+ +L
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS---ELAGN 304
Query: 288 VMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE 347
+ G SL DMYA+CG ++ A VF + R + +WN ++ GLA +G V +F M
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
Query: 348 E-VKPDAVTFMALLSACSHSGLVEQGRQ 374
PDA++ +LL A + + QG Q
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 14/274 (5%)
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEG----VESGRVVFDGMPERNEVAWTVMIVG 225
L + RK+ I + T++ + ++ G + R VFD MPERN V++T +I G
Sbjct: 83 LAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITG 142
Query: 226 YVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWD 285
Y NG EA L +M+ + S++ AC+ S DV +G+ +H +K +
Sbjct: 143 YSQNGQGAEAIRLYLKMLQE-DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK-LESS 200
Query: 286 LGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM 345
++ +L+ MY + ++S A VF + +++++W++++ G + G + M
Sbjct: 201 SHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM 260
Query: 346 VE--EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAG 403
+ P+ F + L ACS + G Q L E+ + D+ R G
Sbjct: 261 LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQ-IHGLCIKSELAGNAIAGCSLCDMYARCG 319
Query: 404 HLEEAELLVKKMPIRPN----EVVLGSLLGSCYA 433
L A + ++ RP+ V++ L + YA
Sbjct: 320 FLNSARRVFDQIE-RPDTASWNVIIAGLANNGYA 352
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Query: 229 NGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGV 288
+ F +EA F++ T S++ ACS S + GR +H + +
Sbjct: 44 SNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNS-NCKYDT 102
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE 348
++ ++ MY KCG + A VF M RN+V++ +V+ G + +G G + ++ M++E
Sbjct: 103 ILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQE 162
Query: 349 -VKPDAVTFMALLSACSHSGLVEQGRQ 374
+ PD F +++ AC+ S V G+Q
Sbjct: 163 DLVPDQFAFGSIIKACASSSDVGLGKQ 189
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 253/497 (50%), Gaps = 43/497 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G +LHA G S NL + N ++ +Y+ C L + + F + KD + +T +I
Sbjct: 405 GMELHAYVIKHGWDS--NLQVGNTLIDMYSKCNLTCYMGRAF--LRMHDKDLISWTTVIA 460
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ +E+L+LF ++ + + ID L + ++H +++ G
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD 520
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
T + N ++D+Y K +G A +VF I+ VVS
Sbjct: 521 -TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVS------------------------- 554
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
WT MI NG EA L + MV G + V L +LSA + + GR
Sbjct: 555 ------WTSMISSSALNGNESEAVELFRRMV-ETGLSADSVALLCILSAAASLSALNKGR 607
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H + ++ G+ L + ++VDMYA CG + A VF + R+ ++ + +++ MH
Sbjct: 608 EIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 666
Query: 333 GMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G GKA V++F M E V PD ++F+ALL ACSH+GL+++GR + + +E YE+ P EH
Sbjct: 667 GCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEH 726
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
Y C+VD+LGRA + EA VK M P V +LL +C +H + ++ E + L+E++
Sbjct: 727 YVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELE 786
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P N +L+SN++A G+ R +K G+ K PG S I +DG++H+F+A DKSH
Sbjct: 787 PKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSH 846
Query: 512 PRTSEIYLKLDDMICRL 528
P + EIY KL ++ +L
Sbjct: 847 PESKEIYEKLSEVTRKL 863
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 39/331 (11%)
Query: 37 GKQLHAVATVTGLLSSPNL-FLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYT--A 93
G+QLH+ + S L FL ++ +Y C A K+FDE+P + + A
Sbjct: 99 GRQLHS--RIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGA 156
Query: 94 LIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
+ P +L L+ MR G+ + +L D G ++HS +VK G+
Sbjct: 157 YVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 216
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
+ NA++ +Y K L AR++F DG E
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLF-------------------------------DGFQE 245
Query: 214 RNE-VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
+ + V W ++ Y +G + E L +EM G N T+ S L+AC +G+
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHM-TGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H +K+ + V +L+ MY +CG++ A + + M+ +VV WN+++ G +
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSA 362
M K ++ F M+ K D V+ ++++A
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 207/494 (41%), Gaps = 79/494 (15%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GK++HA + + S L++ NA++ +Y C A ++ ++ ++ D V + +LI+
Sbjct: 303 GKEIHA-SVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM--NNADVVTWNSLIK 359
Query: 97 ----RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
E+L+ F +M G D RL + G ++H+ V+K G+
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+V N ++D+Y K L + F + ++SWT V
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV--------------------- 458
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
I GY N EA L ++ V E++ + L S+L A S + + +
Sbjct: 459 ----------IAGYAQNDCHVEALELFRD-VAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H ++ D ++ LVD+Y KC + A VF+++ ++VV+W +++ A++
Sbjct: 508 EIHCHILRKGLLD--TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALN 565
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYF--------------- 376
G V++F MVE + D+V + +LSA + + +GR+
Sbjct: 566 GNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA 625
Query: 377 ----------RDLESVYEIRPEIE-----HYACMVDLLGRAGHLEEAELLVKKM---PIR 418
DL+S + IE Y M++ G G + A L KM +
Sbjct: 626 VAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685
Query: 419 PNEVVLGSLLGSCYAHGKLQLAE---KIVRELVEMDPLNTEYHILLSNMYALSGKVEKAN 475
P+ + +LL +C G L KI+ E++P E+++ L +M + V +A
Sbjct: 686 PDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW-PEHYVCLVDMLGRANCVVEAF 744
Query: 476 SFRRVLKKRGIRKV 489
F +++K +V
Sbjct: 745 EFVKMMKTEPTAEV 758
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 6/243 (2%)
Query: 175 KVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
K F E+ + V + G K ++ VFD MP+R AW MI YV NG
Sbjct: 108 KTFPSFELDFLAGKLVFMYG--KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPAS 165
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
A L M G L + ++L AC++ D+ G +H VK +G+ + +L
Sbjct: 166 ALALYWNMRVE-GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK-LGYHSTGFIVNAL 223
Query: 295 VDMYAKCGRISIALVVFKNMSRR-NVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPD 352
V MYAK +S A +F + + V WN++L + G +++F M + P+
Sbjct: 224 VSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN 283
Query: 353 AVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLV 412
+ T ++ L+AC + G++ + E+ ++ + R G + +AE ++
Sbjct: 284 SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
Query: 413 KKM 415
++M
Sbjct: 344 RQM 346
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 22/214 (10%)
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAM-GWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR 316
VL C + V GR +H K ++L + G LV MY KCG + A VF M
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-KLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQY 375
R AWN ++G +G + + ++ +M VE V +F ALL AC+
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAK---------- 194
Query: 376 FRDLESVYEIRP---EIEHYA------CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGS 426
RD+ S E+ ++ +++ +V + + L A L + + V+ S
Sbjct: 195 LRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 254
Query: 427 LLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHIL 460
+L S GK ++ RE+ P Y I+
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 288
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 243/501 (48%), Gaps = 46/501 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G Q+HA L + ++ N+++ +YA C + ARK+FD + D V + A+I
Sbjct: 369 GTQVHAYTIKANL--GNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA--DVVLFNAMIE 424
Query: 97 RCPPL-------ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFG 149
L E+L +F +MR + L + Q+H + K+G
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG 484
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFD 209
+A++D+Y L ++R +VFD
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSR-------------------------------LVFD 513
Query: 210 GMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC 269
M ++ V W M GYV +EA L E+ + T ++++A V
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEFTFANMVTAAGNLASVQ 572
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
+G+ H +K G + + +L+DMYAKCG A F + + R+VV WN+V+
Sbjct: 573 LGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSY 631
Query: 330 AMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
A HG GK + M M+ E ++P+ +TF+ +LSACSH+GLVE G + F +L + I PE
Sbjct: 632 ANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQF-ELMLRFGIEPE 690
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
EHY CMV LLGRAG L +A L++KMP +P +V SLL C G ++LAE +
Sbjct: 691 TEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAI 750
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
DP ++ +LSN+YA G +A R +K G+ K PG S I ++ ++H F + D
Sbjct: 751 LSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKD 810
Query: 509 KSHPRTSEIYLKLDDMICRLR 529
KSH + ++IY LDD++ ++R
Sbjct: 811 KSHCKANQIYEVLDDLLVQIR 831
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 188/423 (44%), Gaps = 47/423 (11%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GKQ+HA GL +L N ++ Y C A KLF+ +P +K+ + +T L+
Sbjct: 268 GKQIHAHILRYGLEMDASLM--NVLIDSYVKCGRVIAAHKLFNGMP--NKNIISWTTLLS 323
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ E+++LF M + GL D L G QVH+ +K G
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ V N+++D+Y K L +ARKVF VV + +++G
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY----------------- 426
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
R W + EA + ++M F + +T S+L A + + + +
Sbjct: 427 SRLGTQWEL-----------HEALNIFRDMRFRL-IRPSLLTFVSLLRASASLTSLGLSK 474
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+HG K G +L + G++L+D+Y+ C + + +VF M +++V WN++ G
Sbjct: 475 QIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 333 GMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYF-RDLESVYEIRPEIE 390
+ +++F + + +PD TF +++A + V+ G+++ + L+ E P I
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGK----LQLAEKIVRE 446
+ ++D+ + G E+A R + V S++ S HG+ LQ+ EK++ E
Sbjct: 594 N--ALLDMYAKCGSPEDAHKAFDSAASR-DVVCWNSVISSYANHGEGKKALQMLEKMMSE 650
Query: 447 LVE 449
+E
Sbjct: 651 GIE 653
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 153/337 (45%), Gaps = 53/337 (15%)
Query: 40 LHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCP 99
+H V GL + +L N ++++Y+ +ARK+F+++P+ ++ V ++ ++ C
Sbjct: 66 VHGQIIVWGL--ELDTYLSNILINLYSRAGGMVYARKVFEKMPE--RNLVSWSTMVSACN 121
Query: 100 P----LESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPN--VGPQVHSGVVKFGFGK 152
ESL +F+E R S + L + Q+ S +VK GF +
Sbjct: 122 HHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDR 181
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V ++D Y+K G ++ R+VFD +P
Sbjct: 182 DVYVGTLLIDFYLKDG-------------------------------NIDYARLVFDALP 210
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCV----TLCSVLSACSQSGDV 268
E++ V WT MI G V G + + L +++ E N V L +VLSACS +
Sbjct: 211 EKSTVTWTTMISGCVKMGRSYVSLQLFYQLM-----EDNVVPDGYILSTVLSACSILPFL 265
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
G+ +H ++ G ++ + L+D Y KCGR+ A +F M +N+++W +L G
Sbjct: 266 EGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 329 LAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACS 364
+ + K +++F M + +KPD ++L++C+
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 200 GVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVL 259
G+ R VF+ MPERN V+W+ M+ +G +E+ + E N L S +
Sbjct: 94 GMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 260 SACSQSGDVCVGRW----VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
ACS G GRW + F VK+ G+D V VGT L+D Y K G I A +VF +
Sbjct: 154 QACS--GLDGRGRWMVFQLQSFLVKS-GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP 210
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQ 374
++ V W ++ G G + +F ++E+ V PD +LSACS +E G+Q
Sbjct: 211 EKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQ 270
Query: 375 YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP 416
+ Y + + ++D + G + A L MP
Sbjct: 271 IHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
VHG + G +L + L+++Y++ G + A VF+ M RN+V+W+ ++ HG
Sbjct: 66 VHG-QIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 334 MGKAVVDMFPHMVEEVK--PDAVTFMALLSACSHSGLVEQGRQYFRDLESVY---EIRPE 388
+ + + +F K P+ + + AC SGL +GR L+S +
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRD 182
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
+ ++D + G+++ A L+ +P + V +++ C G+ ++ ++ +L+
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 449 E 449
E
Sbjct: 242 E 242
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/509 (29%), Positives = 258/509 (50%), Gaps = 51/509 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
+Q+H + G S L + N ++ Y+ C + + +F ++ S ++ V +T +I
Sbjct: 295 ARQIHGLCIKRGYESL--LEVGNILMSRYSKCGVLEAVKSVFHQM--SERNVVSWTTMIS 350
Query: 97 RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRV 156
+++ +F+ MR G+ + G ++H +K GF V
Sbjct: 351 SNKD-DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 157 CNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNE 216
N+ + LY KF E +E + F+ + R
Sbjct: 410 GNSFITLYAKF-------------------------------EALEDAKKAFEDITFREI 438
Query: 217 VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFEL--NCVTLCSVLSACSQSGDVCV--GR 272
++W MI G+ NGF+ EA +M E N T SVL+A + + D+ V G+
Sbjct: 439 ISWNAMISGFAQNGFSHEAL----KMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQ 494
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
H +K +G + +V ++L+DMYAK G I + VF MS++N W +++ + H
Sbjct: 495 RCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G + V+++F M++E V PD VTF+++L+AC+ G+V++G + F + VY + P EH
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 613
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
Y+CMVD+LGRAG L+EAE L+ ++P P E +L S+LGSC HG +++ K+ +EM
Sbjct: 614 YSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMK 673
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV---DGQL--HQFSA 506
P + ++ + N+YA + +KA R+ ++K+ + K G S I V +G L FS+
Sbjct: 674 PELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSS 733
Query: 507 GDKSHPRTSEIYLKLDDMICRLRLAGYVP 535
GDKSHP++ EIY ++ + + L G V
Sbjct: 734 GDKSHPKSDEIYRMVEIIGLEMNLEGKVA 762
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 137/323 (42%), Gaps = 47/323 (14%)
Query: 74 ARKLFDEIPQSH-KDSVDYT--ALIRRCPPLESLQLFIEMRQLG-LSIDXXXXXXXXXXX 129
A KLFD Q + S++++ +RR P +L +F E QLG
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 130 XRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWT 189
GD G Q+H GF V NAVM +Y K G A +F + P VVSW
Sbjct: 87 ACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWN 146
Query: 190 VVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFE 249
+L G FD N++A +V G +AF
Sbjct: 147 TILSG-------------FDD----NQIALN-FVVRMKSAGVVFDAF------------- 175
Query: 250 LNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALV 309
T + LS C S +G + VK G + ++VG S + MY++ G A
Sbjct: 176 ----TYSTALSFCVGSEGFLLGLQLQSTVVKT-GLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 310 VFKNMSRRNVVAWNAVLGGLAMHG-MGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSG 367
VF MS +++++WN++L GL+ G G V +F M+ E V+ D V+F ++++ C H
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 368 LVEQGRQYF-----RDLESVYEI 385
++ RQ R ES+ E+
Sbjct: 291 DLKLARQIHGLCIKRGYESLLEV 313
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 170/429 (39%), Gaps = 77/429 (17%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G Q+H +T +G S + + NA++ +Y +A +F+ + D V + ++
Sbjct: 95 GCQIHGFSTTSGFTSF--VCVSNAVMGMYRKAGRFDNALCIFENLVD--PDVVSWNTILS 150
Query: 97 RCPPLE-SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTR 155
+ +L + M+ G+ D +G Q+ S VVK G
Sbjct: 151 GFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV 210
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERN 215
V N+ + +Y + G AR+VF D M ++
Sbjct: 211 VGNSFITMYSRSGSFRGARRVF-------------------------------DEMSFKD 239
Query: 216 EVAWTVMIVGYVGNG-FTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
++W ++ G G F EA + ++M+ G EL+ V+ SV++ C D+ + R +
Sbjct: 240 MISWNSLLSGLSQEGTFGFEAVVIFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQI 298
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
HG +K G++ + VG L+ Y+KCG + VF MS RNVV+W ++
Sbjct: 299 HGLCIKR-GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SN 352
Query: 335 GKAVVDMFPHM-VEEVKPDAVTFMALLSA----------------CSHSGLVEQ---GRQ 374
V +F +M + V P+ VTF+ L++A C +G V + G
Sbjct: 353 KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNS 412
Query: 375 Y---------FRDLESVYE--IRPEIEHYACMVDLLGRAGHLEEA--ELLVKKMPIRPNE 421
+ D + +E EI + M+ + G EA L PNE
Sbjct: 413 FITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNE 472
Query: 422 VVLGSLLGS 430
GS+L +
Sbjct: 473 YTFGSVLNA 481
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
G ++ VTLC L AC GD+ G +HGF+ + G+ V V +++ MY K GR
Sbjct: 73 GRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTS-GFTSFVCVSNAVMGMYRKAGRFDN 129
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMG-KAVVDMFPHMVEEVKPDAVTFMALLSACSH 365
AL +F+N+ +VV+WN +L G + + VV M V DA T+ LS C
Sbjct: 130 ALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRM---KSAGVVFDAFTYSTALSFCVG 186
Query: 366 S-----GLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPN 420
S GL Q LES + + + R+G A + +M + +
Sbjct: 187 SEGFLLGLQLQSTVVKTGLESDLVVGNSF------ITMYSRSGSFRGARRVFDEMSFK-D 239
Query: 421 EVVLGSLLGSCYAHGKLQLAEKIV-----RELVEMD 451
+ SLL G ++ RE VE+D
Sbjct: 240 MISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELD 275
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 231/441 (52%), Gaps = 11/441 (2%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIE 109
NL N +L+ Y+ L A +LFD+I + KD V + +I R+ E+L + E
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITE--KDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
M + G+ R + G Q+H +VK GF + ++ Y
Sbjct: 296 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 355
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ A + F + S ++ G VK VE R VFD +++ +W MI GY +
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQS 415
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVM 289
+ A L +EM+ + + +T+ SV SA S G + G+ H + +
Sbjct: 416 LSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY-LNFSTIPPNDN 474
Query: 290 VGTSLVDMYAKCGRISIALVVF---KNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV 346
+ +++DMYAKCG I AL +F KN+S + WNA++ G A HG K +D++ +
Sbjct: 475 LTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQ 534
Query: 347 E-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHL 405
+KP+++TF+ +LSAC H+GLVE G+ YF ++S + I P+I+HY CMVDLLG+AG L
Sbjct: 535 SLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRL 594
Query: 406 EEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMY 465
EEA+ ++KKMP++ + ++ G LL + HG +++AE EL +DP + ++LSN+Y
Sbjct: 595 EEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVY 654
Query: 466 ALSGKVEKANSFRRVLKKRGI 486
A +G+ E R ++ R +
Sbjct: 655 ADAGRWEDVALVREEMRTRDV 675
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 129/573 (22%), Positives = 238/573 (41%), Gaps = 124/573 (21%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHAR--------------------- 75
G+Q+H +GL S N ++ N++L++YA C L + A
Sbjct: 60 GRQIHCRVLKSGLDS--NGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGY 117
Query: 76 ----------KLFDEIPQSHKDSVDYTALIRRCPP----LESLQLFIEMRQLGLSIDXXX 121
KLFD +P+ + V YT LI+ E+++LF EMR LG+ ++
Sbjct: 118 VRSRRLWDALKLFDVMPE--RSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVT 175
Query: 122 XXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIE 181
LG + S +K V ++ +Y L +ARK+F E+
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 182 VPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKE 241
++V+W V+L+G K +E +FD + E++ V+W MI G + EA E
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 242 MVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKC 301
M+ CG + + V + +LSA ++S G +HG VK G+D + +++ YA
Sbjct: 296 ML-RCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR-GFDCYDFLQATIIHFYAVS 353
Query: 302 GRISIALV-------------------------------VFKNMSRRNVVAWNAVLGGLA 330
I +AL VF +++ +WNA++ G A
Sbjct: 354 NDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYA 413
Query: 331 MHGMGKAVVDMFPHMV--EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
+ + +F M+ +VKPDA+T +++ SA S G +E+G++ D + I P
Sbjct: 414 QSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRA-HDYLNFSTIPPN 472
Query: 389 IEHYACMVDLLGRAGHLEEAELL------------------------------------- 411
A ++D+ + G +E A +
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD 532
Query: 412 VKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE---MDPLNTEYHILLSNMYALS 468
++ +PI+PN + +L +C G ++L + + ++P + +++ + ++ +
Sbjct: 533 LQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEP-DIKHYGCMVDLLGKA 591
Query: 469 GKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQL 501
G++E+A K I+K+P + + + G L
Sbjct: 592 GRLEEA--------KEMIKKMPVKADVMIWGML 616
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 5/247 (2%)
Query: 133 GDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVL 192
D G Q+H V+K G +CN+V+++Y K LL +A VF + S+ +++
Sbjct: 55 NDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMV 114
Query: 193 DGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNC 252
DG V+ + +FD MPER+ V++T +I GY N EA L +EM G LN
Sbjct: 115 DGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR-NLGIMLNE 173
Query: 253 VTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFK 312
VTL +V+SACS G + R + A+K + + V V T+L+ MY C + A +F
Sbjct: 174 VTLATVISACSHLGGIWDCRMLQSLAIK-LKLEGRVFVSTNLLHMYCLCLCLKDARKLFD 232
Query: 313 NMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQG 372
M RN+V WN +L G + G+ + ++F + E+ D V++ ++ C +++
Sbjct: 233 EMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK---DIVSWGTMIDGCLRKNQLDEA 289
Query: 373 RQYFRDL 379
Y+ ++
Sbjct: 290 LVYYTEM 296
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 158/494 (31%), Positives = 251/494 (50%), Gaps = 46/494 (9%)
Query: 37 GKQLHAVATVTGLLSSPNL-FLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI 95
GK +H A L PN L A++ +YA C S + + S ++ V + +LI
Sbjct: 322 GKSVHGFAVRREL--DPNYESLSLALVELYAECGKLSDCETVLRVV--SDRNIVAWNSLI 377
Query: 96 ----RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
R +++L LF +M + D G +G Q+H V++
Sbjct: 378 SLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS 437
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
V N+++D+Y K G V+S VF+ +
Sbjct: 438 D-EFVQNSLIDMYSKSG-------------------------------SVDSASTVFNQI 465
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
R+ V W M+ G+ NG + EA L M + E+N VT +V+ ACS G + G
Sbjct: 466 KHRSVVTWNSMLCGFSQNGNSVEAISLFDYM-YHSYLEMNEVTFLAVIQACSSIGSLEKG 524
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+WVH + + DL T+L+DMYAKCG ++ A VF+ MS R++V+W++++ M
Sbjct: 525 KWVHHKLIISGLKDL--FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGM 582
Query: 332 HGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
HG + + F MVE KP+ V FM +LSAC HSG VE+G+ YF ++S + + P E
Sbjct: 583 HGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSE 641
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
H+AC +DLL R+G L+EA +K+MP + V GSL+ C H K+ + + I +L ++
Sbjct: 642 HFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDI 701
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
+T Y+ LLSN+YA G+ E+ R +K ++KVPG S+I +D ++ +F AG+++
Sbjct: 702 VTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEEN 761
Query: 511 HPRTSEIYLKLDDM 524
+T EIY L ++
Sbjct: 762 RIQTDEIYRFLGNL 775
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 174/370 (47%), Gaps = 47/370 (12%)
Query: 57 LRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRC----PPLESLQLFIEMRQ 112
+ ++L +Y S A K+FD +P +D V ++ L+ C +++L++F M
Sbjct: 138 IETSLLCMYGQTGNLSDAEKVFDGMPV--RDLVAWSTLVSSCLENGEVVKALRMFKCMVD 195
Query: 113 LGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGE 172
G+ D LG + VH + + F +CN+++ +Y K G L
Sbjct: 196 DGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLS 255
Query: 173 ARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFT 232
+ ++F +I ++N V+WT MI Y F+
Sbjct: 256 SERIFEKI-------------------------------AKKNAVSWTAMISSYNRGEFS 284
Query: 233 KEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGT 292
++A EM+ G E N VTL SVLS+C G + G+ VHGFAV+ +
Sbjct: 285 EKALRSFSEMI-KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL 343
Query: 293 SLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV-EEVKP 351
+LV++YA+CG++S V + +S RN+VAWN+++ A GM + +F MV + +KP
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 352 DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH---YACMVDLLGRAGHLEEA 408
DA T + +SAC ++GLV G+Q + IR ++ ++D+ ++G ++ A
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHV-----IRTDVSDEFVQNSLIDMYSKSGSVDSA 458
Query: 409 ELLVKKMPIR 418
+ ++ R
Sbjct: 459 STVFNQIKHR 468
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 214/491 (43%), Gaps = 82/491 (16%)
Query: 39 QLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR-- 96
QLHA VTG L L + ++ YA P +R +F+ P + DS Y LI+
Sbjct: 19 QLHAHLLVTGRLRRDPLPV-TKLIESYAFMGSPDSSRLVFEAFP--YPDSFMYGVLIKCN 75
Query: 97 -RCPPLESL-----QLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
C L++ +L E Q+ + L +VG +VH ++K G
Sbjct: 76 VWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHL---SVGGKVHGRIIKGGV 132
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
+ +++ +Y + G L +A KVF DG
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVF-------------------------------DG 161
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
MP R+ VAW+ ++ + NG +A + K MV G E + VT+ SV+ C++ G + +
Sbjct: 162 MPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV-DDGVEPDAVTMISVVEGCAELGCLRI 220
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
R VHG + M +DL + SL+ MY+KCG + + +F+ ++++N V+W A++
Sbjct: 221 ARSVHGQITRKM-FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN 279
Query: 331 MHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYF-----RDLESVYE 384
+ + F M++ ++P+ VT ++LS+C GL+ +G+ R+L+ YE
Sbjct: 280 RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE 339
Query: 385 --IRPEIEHYA------------------------CMVDLLGRAGHLEEAELLVKKM--- 415
+E YA ++ L G + +A L ++M
Sbjct: 340 SLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ 399
Query: 416 PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKAN 475
I+P+ L S + +C G + L ++I ++ D + L +MY+ SG V+ A+
Sbjct: 400 RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSAS 459
Query: 476 SFRRVLKKRGI 486
+ +K R +
Sbjct: 460 TVFNQIKHRSV 470
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 238/486 (48%), Gaps = 40/486 (8%)
Query: 59 NAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPLES------LQLFIEMRQ 112
NA+++ YA+ + S A +LFD++ S + T I L++ L L MR
Sbjct: 214 NAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRN 273
Query: 113 LGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGE 172
S+D +G +G ++H + + V N ++ +Y K L
Sbjct: 274 FPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRH 333
Query: 173 ARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFT 232
A VF + E S+ +W + I GY +
Sbjct: 334 ALIVFRQTEENSLCTWNSI-------------------------------ISGYAQLNKS 362
Query: 233 KEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGT 292
+EA LL+EM+ GF+ N +TL S+L C++ ++ G+ H + ++ + M+
Sbjct: 363 EEASHLLREMLVA-GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWN 421
Query: 293 SLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKP 351
SLVD+YAK G+I A V MS+R+ V + +++ G G G + +F M +KP
Sbjct: 422 SLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP 481
Query: 352 DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELL 411
D VT +A+LSACSHS LV +G + F ++ Y IRP ++H++CMVDL GRAG L +A+ +
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI 541
Query: 412 VKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKV 471
+ MP +P+ +LL +C+ HG Q+ + +L+EM P N Y++L++NMYA +G
Sbjct: 542 IHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSW 601
Query: 472 EKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLR-L 530
K R +++ G++K PG + I D FS GD S P Y LD + ++
Sbjct: 602 SKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDN 661
Query: 531 AGYVPN 536
AGY N
Sbjct: 662 AGYAIN 667
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 153/345 (44%), Gaps = 46/345 (13%)
Query: 134 DPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLD 193
D G VH + + VCNA++ +Y +F +G AR++F + VSW V++
Sbjct: 159 DVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVIN 218
Query: 194 GVVKWEGVESGRV-VFDGM----PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGF 248
EG+ S +FD M E + + W ++ G + G A L+ M
Sbjct: 219 CYAS-EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR-NFPT 276
Query: 249 ELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIAL 308
L+ V + L ACS G + +G+ +HG A+ + +D V +L+ MY+KC + AL
Sbjct: 277 SLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHS-SYDGIDNVRNTLITMYSKCKDLRHAL 335
Query: 309 VVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSG 367
+VF+ ++ WN+++ G A + + M V +P+++T ++L C+
Sbjct: 336 IVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIA 395
Query: 368 LVEQGRQY---------FRD-------LESVY----------------EIRPEIEHYACM 395
++ G+++ F+D L VY R E+ Y +
Sbjct: 396 NLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVT-YTSL 454
Query: 396 VDLLGRAGHLEEAELLVKKMP---IRPNEVVLGSLLGSCYAHGKL 437
+D G G A L K+M I+P+ V + ++L +C +H KL
Sbjct: 455 IDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSAC-SHSKL 498
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 219 WTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFA 278
W V+I Y N +E K MV G + T SVL AC ++ DV GR VHG +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMV-SKGIRPDAFTYPSVLKACGETLDVAFGRVVHG-S 169
Query: 279 VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAV 338
++ + + V +L+ MY + + IA +F M R+ V+WNAV+ A GM
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 339 VDMFPHM-VEEVKPDAVTFMALLSACSHS-------GLVEQGRQYFRDLESVYEI 385
++F M V+ +T+ + C + GL+ + R + L+ V I
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 192/319 (60%), Gaps = 5/319 (1%)
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
VE+ VF+ MPERN V+WT MI G+ L +M + N T ++LS
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS-DPNDYTFTALLS 229
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
AC+ SG + GR VH + MG + + SL+ MY KCG + A +F S ++VV
Sbjct: 230 ACTGSGALGQGRSVHCQTLH-MGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
+WN+++ G A HG+ +++F M+ + KPDA+T++ +LS+C H+GLV++GR++F +
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF-N 347
Query: 379 LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ 438
L + + ++PE+ HY+C+VDLLGR G L+EA L++ MP++PN V+ GSLL SC HG +
Sbjct: 348 LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVW 407
Query: 439 LAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVD 498
+ E + ++P H+ L+N+YA G ++A + R+++K +G++ PG S I ++
Sbjct: 408 TGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Query: 499 GQLHQFSAGDKSHPRTSEI 517
+ F A D S+ R EI
Sbjct: 468 NYVFMFKAEDGSNCRMLEI 486
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
G+ + L S + +C + D G H A+K G+ V +G+SLV +Y G +
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKG-GFISDVYLGSSLVVLYRDSGEVEN 173
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVK-PDAVTFMALLSACSH 365
A VF+ M RNVV+W A++ G A + ++ M + P+ TF ALLSAC+
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 366 SGLVEQGR 373
SG + QGR
Sbjct: 234 SGALGQGR 241
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/440 (32%), Positives = 224/440 (50%), Gaps = 44/440 (10%)
Query: 100 PLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNA 159
P+ES+ ++ EM++ G+ + G Q+ V+K GF V N
Sbjct: 94 PVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNN 153
Query: 160 VMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAW 219
++ LY +ARKVF D M ERN V+W
Sbjct: 154 LIHLYGTCKKTSDARKVF-------------------------------DEMTERNVVSW 182
Query: 220 TVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAV 279
++ V NG F EM+ G F + T+ +LSAC G++ +G+ VH V
Sbjct: 183 NSIMTALVENGKLNLVFECFCEMI-GKRFCPDETTMVVLLSACG--GNLSLGKLVHS-QV 238
Query: 280 KAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVV 339
+L +GT+LVDMYAK G + A +VF+ M +NV W+A++ GLA +G + +
Sbjct: 239 MVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEAL 298
Query: 340 DMFPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVD 397
+F M++E V+P+ VTF+ +L ACSH+GLV+ G +YF ++E +++I+P + HY MVD
Sbjct: 299 QLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVD 358
Query: 398 LLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ---LAEKIVRELVEMDPLN 454
+LGRAG L EA +KKMP P+ VV +LL +C H + EK+ + L+E++P
Sbjct: 359 ILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKR 418
Query: 455 TEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRT 514
+ ++++N +A + +A RRV+K+ ++K+ G S + + G H+F +G
Sbjct: 419 SGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEY 478
Query: 515 SEIYLKLD----DMICRLRL 530
IY LD + C RL
Sbjct: 479 VSIYELLDLFKFQLTCDYRL 498
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 135/283 (47%), Gaps = 17/283 (6%)
Query: 175 KVFGEIEVPSVVSWTVVLDGVVK------WEGVESGRVVFDGMPERNEVAWTVMIVGYVG 228
++ G+I + S+ + + ++ +V+ + + R + + W ++ GY
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSS 90
Query: 229 NGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGV 288
+ E+ W+ EM G + N +T +L AC+ + GR + +K G+D V
Sbjct: 91 SDSPVESIWVYSEMKRR-GIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKH-GFDFDV 148
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV-E 347
VG +L+ +Y C + S A VF M+ RNVV+WN+++ L +G V + F M+ +
Sbjct: 149 YVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGK 208
Query: 348 EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEE 407
PD T + LLSAC G + G+ + V E+ +VD+ ++G LE
Sbjct: 209 RFCPDETTMVVLLSAC--GGNLSLGKLVHSQV-MVRELELNCRLGTALVDMYAKSGGLEY 265
Query: 408 AELLVKKMPIRP----NEVVLGSLLGSCYAHGKLQLAEKIVRE 446
A L+ ++M + + +++G L +A LQL K+++E
Sbjct: 266 ARLVFERMVDKNVWTWSAMIVG-LAQYGFAEEALQLFSKMMKE 307
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 122/299 (40%), Gaps = 52/299 (17%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVD--YTALIRRCPPLESLQLFIEMR 111
++++ N ++H+Y C S ARK+FDE+ + + S + TAL+ + F EM
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 112 QLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLG 171
D G+ ++G VHS V+ R+ A++D+Y K G L
Sbjct: 207 GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 172 EARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGF 231
AR VF + M ++N W+ MIVG GF
Sbjct: 265 YARLVF-------------------------------ERMVDKNVWTWSAMIVGLAQYGF 293
Query: 232 TKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG-RWVHGF----AVKAMGWDL 286
+EA L +M+ N VT VL ACS +G V G ++ H +K M
Sbjct: 294 AEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHY 353
Query: 287 GVMVGTSLVDMYAKCGRISIALVVFKNMS-RRNVVAWNAVLGGLAMH------GMGKAV 338
G M VD+ + GR++ A K M + V W +L ++H G+G+ V
Sbjct: 354 GAM-----VDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKV 407
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 234/464 (50%), Gaps = 42/464 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQ+H +GL+ +L + +++ +Y+ C + KLF IP KD+ + ++I
Sbjct: 469 GKQVHGYTLKSGLV--LDLTVGSSLFTLYSKCGSLEESYKLFQGIP--FKDNACWASMIS 524
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
E++ LF EM G S D G ++H ++ G K
Sbjct: 525 GFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ +A++++Y K G L AR+V+ D +P
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVY-------------------------------DRLP 613
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
E + V+ + +I GY +G ++ F L ++MV GF ++ + S+L A + S + +G
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS-GFTMDSFAISSILKAAALSDESSLGA 672
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
VH + K +G VG+SL+ MY+K G I F ++ +++AW A++ A H
Sbjct: 673 QVHAYITK-IGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQH 731
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G + ++ M E+ KPD VTF+ +LSACSH GLVE+ + + Y I PE H
Sbjct: 732 GKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRH 791
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
Y CMVD LGR+G L EAE + M I+P+ +V G+LL +C HG+++L + ++ +E++
Sbjct: 792 YVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELE 851
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
P + +I LSN+ A G+ ++ R+++K G++K PG SS+
Sbjct: 852 PSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 181/404 (44%), Gaps = 52/404 (12%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIE 109
++F+ AI+ +YA C + A ++F IP + V +T ++ + +L++F E
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIP--NPSVVSWTVMLSGYTKSNDAFSALEIFKE 341
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
MR G+ I+ R QVH+ V K GF + V A++ +Y K G
Sbjct: 342 MRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGD 401
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ + +VF ++ D + +N V VMI + +
Sbjct: 402 IDLSEQVFEDL----------------------------DDIQRQNIV--NVMITSFSQS 431
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVM 289
+A L M+ G + ++CS+LS + +G+ VHG+ +K+ G L +
Sbjct: 432 KKPGKAIRLFTRMLQE-GLRTDEFSVCSLLSVLDC---LNLGKQVHGYTLKS-GLVLDLT 486
Query: 290 VGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE- 348
VG+SL +Y+KCG + + +F+ + ++ W +++ G +G + + +F M+++
Sbjct: 487 VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG 546
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH----YACMVDLLGRAGH 404
PD T A+L+ CS + +G++ Y +R I+ + +V++ + G
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHG-----YTLRAGIDKGMDLGSALVNMYSKCGS 601
Query: 405 LEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
L+ A + ++P + V SL+ HG +Q + R++V
Sbjct: 602 LKLARQVYDRLP-ELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 142/316 (44%), Gaps = 45/316 (14%)
Query: 138 GPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVK 197
G V + V+K G + VC A++DLY K G + EA +VF I PSVVS
Sbjct: 270 GKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS---------- 318
Query: 198 WEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCS 257
WTVM+ GY + A + KEM G E+N T+ S
Sbjct: 319 ---------------------WTVMLSGYTKSNDAFSALEIFKEMRHS-GVEINNCTVTS 356
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS-- 315
V+SAC + VC VH + K+ G+ L V +L+ MY+K G I ++ VF+++
Sbjct: 357 VISACGRPSMVCEASQVHAWVFKS-GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 316 -RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGR 373
R+N+V N ++ + + +F M++E ++ D + +LLS L +Q
Sbjct: 416 QRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVH 473
Query: 374 QYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYA 433
Y V ++ + + L + G LEE+ L + +P + N S++
Sbjct: 474 GYTLKSGLVLDLTVG----SSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNE 528
Query: 434 HGKLQLAEKIVRELVE 449
+G L+ A + E+++
Sbjct: 529 YGYLREAIGLFSEMLD 544
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
+FD +P+ + V+ +MI GY + +E+ +M F GFE N ++ SV+SACS
Sbjct: 106 LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF-LGFEANEISYGSVISACSALQ 164
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVL 326
V +K MG+ +V ++L+D+++K R A VF++ NV WN ++
Sbjct: 165 APLFSELVCCHTIK-MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTII 223
Query: 327 GGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACS-----HSGLVEQGRQYFRDLE 380
G + AV D+F M V KPD+ T+ ++L+AC+ G V Q R E
Sbjct: 224 AGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE 283
Query: 381 SVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP 416
V+ +VDL + GH+ EA + ++P
Sbjct: 284 DVFVC-------TAIVDLYAKCGHMAEAMEVFSRIP 312
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 137/326 (42%), Gaps = 41/326 (12%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPP----LESLQLFIE 109
++FL ++L Y+ + A KLFD IPQ D V +I ESL+ F +
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQ--PDVVSCNIMISGYKQHRLFEESLRFFSK 140
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
M LG + L P V +K G+ V +A++D++ K
Sbjct: 141 MHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR 200
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+A KVF + +V W ++ G ++ + + VFD E M VG+
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGA---VFDLFHE--------MCVGFQ-- 247
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVM 289
+ + T SVL+AC+ + G+ V +K D V
Sbjct: 248 -------------------KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAED--VF 286
Query: 290 VGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE- 348
V T++VD+YAKCG ++ A+ VF + +VV+W +L G + +++F M
Sbjct: 287 VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG 346
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQ 374
V+ + T +++SAC +V + Q
Sbjct: 347 VEINNCTVTSVISACGRPSMVCEASQ 372
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 185/337 (54%), Gaps = 3/337 (0%)
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
+++ ++F + R+ + W MI GYV G +E ++ +M + T SV
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN-RIVPDQYTFASVFR 217
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
ACS + G+ H +K ++V ++LVDMY KC S VF +S RNV+
Sbjct: 218 ACSALDRLEHGKRAHAVMIKRC-IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDL 379
W +++ G HG V+ F M EE +P+ VTF+ +L+AC+H GLV++G ++F +
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSM 336
Query: 380 ESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQL 439
+ Y I PE +HYA MVD LGRAG L+EA V K P + + V GSLLG+C HG ++L
Sbjct: 337 KRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKL 396
Query: 440 AEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDG 499
E + +E+DP N +++ +N YA G E A+ RR ++ G++K PG S I + G
Sbjct: 397 LELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQG 456
Query: 500 QLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPN 536
++H+F D SH + +IY K+ +M Y P+
Sbjct: 457 EVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 51/356 (14%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK++HA V G + N +L+ +L +YA A LF + +D + + A+I
Sbjct: 127 GKRIHAQMFVVGF--ALNEYLKVKLLILYALSGDLQTAGILFRSLKI--RDLIPWNAMIS 182
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
++ E L ++ +MRQ + D L G + H+ ++K +
Sbjct: 183 GYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIK----R 238
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
C + N ++D + ++D K G VFD +
Sbjct: 239 CIK-SNIIVD--------------------------SALVDMYFKCSSFSDGHRVFDQLS 271
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMV-FGCGFELNCVTLCSVLSACSQSGDVCVG 271
RN + WT +I GY +G E ++M GC N VT VL+AC+ G V G
Sbjct: 272 TRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC--RPNPVTFLVVLTACNHGGLVDKG 329
Query: 272 RWVHGFAVKAMGWDLGVMVG----TSLVDMYAKCGRISIAL-VVFKNMSRRNVVAWNAVL 326
W H +++K D G+ ++VD + GR+ A V K+ + + W ++L
Sbjct: 330 -WEHFYSMKR---DYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
Query: 327 GGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESV 382
G +HG K + +E + ++ + + GL E + R +E+
Sbjct: 386 GACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENA 441
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 229 NGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGV 288
G KEA LL + G ++ T +L C Q + G+ +H + +G+ L
Sbjct: 89 TGRLKEAVGLL----WSSGLQVEPETYAVLLQECKQRKEYTKGKRIHA-QMFVVGFALNE 143
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE 348
+ L+ +YA G + A ++F+++ R+++ WNA++ G G+ + + ++ M +
Sbjct: 144 YLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN 203
Query: 349 -VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEE 407
+ PD TF ++ ACS +E G++ + I+ I + +VD+ + +
Sbjct: 204 RIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRC-IKSNIIVDSALVDMYFKCSSFSD 262
Query: 408 AELLVKKMPIRPNEVVLGSLLGSCYAHGK----LQLAEKIVRELVEMDPLN 454
+ ++ R N + SL+ HGK L+ EK+ E +P+
Sbjct: 263 GHRVFDQLSTR-NVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVT 312
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 248/490 (50%), Gaps = 41/490 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ LH TG ++ L+ A++ +Y C + ++ + IP +KD V +T +I
Sbjct: 264 GRMLHCQIVKTGF--DVDMHLKTALITMYLKCGKEEASYRVLETIP--NKDVVCWTVMIS 319
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R ++L +F EM Q G + +LG ++G VH V++ G+
Sbjct: 320 GLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL 379
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
T N+++ +Y K G L + V+F+ M
Sbjct: 380 DTPALNSLITMYAKCGHL-------------------------------DKSLVIFERMN 408
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
ER+ V+W +I GY N +A L +EM F +++ T+ S+L ACS +G + VG+
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H +++ +V T+LVDMY+KCG + A F ++S ++VV+W ++ G H
Sbjct: 469 LIHCIVIRSFIRPCS-LVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFH 527
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G G ++++ + ++P+ V F+A+LS+CSH+G+V+QG + F + + + P EH
Sbjct: 528 GKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEH 587
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
AC+VDLL RA +E+A K+ RP+ VLG +L +C A+GK ++ + I +++E+
Sbjct: 588 LACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELK 647
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH 511
P + +++ L + +A + + + ++ G++K+PG S I ++G+ F SH
Sbjct: 648 PGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Query: 512 PRTSEIYLKL 521
+ LKL
Sbjct: 708 SDDTVSLLKL 717
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 208/435 (47%), Gaps = 53/435 (12%)
Query: 40 LHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCP 99
LH A + G ++ + N++L++Y C A+ LFD++ Q +D V + +I
Sbjct: 166 LHDFAVIYGF--DCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ--RDMVSWNTMISGYA 221
Query: 100 PL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTR 155
+ E L+L MR GL D + D +G +H +VK GF
Sbjct: 222 SVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMH 281
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERN 215
+ A++ +Y+K G E+ V + +P ++
Sbjct: 282 LKTALITMYLKCG-------------------------------KEEASYRVLETIPNKD 310
Query: 216 EVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVH 275
V WTVMI G + G ++A + EM+ G +L+ + SV+++C+Q G +G VH
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEML-QSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 276 GFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH-GM 334
G+ ++ G+ L SL+ MYAKCG + +LV+F+ M+ R++V+WNA++ G A + +
Sbjct: 370 GYVLRH-GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDL 428
Query: 335 GKAVVDMFPHM----VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
KA++ +F M V++V D+ T ++LL ACS +G + G+ + + IRP
Sbjct: 429 CKALL-LFEEMKFKTVQQV--DSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSL 484
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE- 449
+VD+ + G+LE A+ + + + V G L+ HGK +A +I E +
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHS 543
Query: 450 -MDPLNTEYHILLSN 463
M+P + + +LS+
Sbjct: 544 GMEPNHVIFLAVLSS 558
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 174/390 (44%), Gaps = 52/390 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G +H V G S + ++ ++++++YA L +HARK+F+E+ + +D V +TA+I
Sbjct: 65 GLSIHQQVLVNGF--SSDFYISSSLVNLYAKFGLLAHARKVFEEMRE--RDVVHWTAMIG 120
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R E+ L EMR G+ + +H V +GF
Sbjct: 121 CYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDC 177
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V N++++LY K +G+A+ +F ++E +VS
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVS------------------------- 212
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
W MI GY G E LL M G G + T + LS D+ +GR
Sbjct: 213 ------WNTMISGYASVGNMSEILKLLYRMR-GDGLRPDQQTFGASLSVSGTMCDLEMGR 265
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H VK G+D+ + + T+L+ MY KCG+ + V + + ++VV W ++ GL
Sbjct: 266 MLHCQIVKT-GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRL 324
Query: 333 GMGKAVVDMFPHMVE---EVKPDAVTFMALLSACSHSGLVEQGRQ-YFRDLESVYEIRPE 388
G + + +F M++ ++ +A+ +++++C+ G + G + L Y + +
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSEAIA--SVVASCAQLGSFDLGASVHGYVLRHGYTL--D 380
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
++ + + GHL+++ ++ ++M R
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNER 410
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 8/170 (4%)
Query: 251 NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVV 310
+ T S+L AC+ + G +H V G+ + +SLV++YAK G ++ A V
Sbjct: 45 DTFTFPSLLKACASLQRLSFGLSIHQ-QVLVNGFSSDFYISSSLVNLYAKFGLLAHARKV 103
Query: 311 FKNMSRRNVVAWNAVLGGLAMHGM-GKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLV 369
F+ M R+VV W A++G + G+ G+A + + +KP VT + +L SG++
Sbjct: 104 FEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML-----SGVL 158
Query: 370 EQGR-QYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
E + Q D +Y +I M++L + H+ +A+ L +M R
Sbjct: 159 EITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR 208
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 222/420 (52%), Gaps = 34/420 (8%)
Query: 76 KLFDEIPQSHKDSVDYTALIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDP 135
++ D+ P + + + IR PL+++Q+++ M + + D ++ D
Sbjct: 74 RILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDF 133
Query: 136 NVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGV 195
+G ++HS V+ GF + + LY K G ARKVF
Sbjct: 134 TLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVF------------------ 175
Query: 196 VKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTL 255
D PER +W +I G G EA + +M G E + T+
Sbjct: 176 -------------DENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK-RSGLEPDDFTM 221
Query: 256 CSVLSACSQSGDVCVGRWVHGFAVKAMGWDLG-VMVGTSLVDMYAKCGRISIALVVFKNM 314
SV ++C GD+ + +H ++A + +M+ SL+DMY KCGR+ +A +F+ M
Sbjct: 222 VSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM 281
Query: 315 SRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGR 373
+RNVV+W++++ G A +G ++ F M E V+P+ +TF+ +LSAC H GLVE+G+
Sbjct: 282 RQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK 341
Query: 374 QYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYA 433
YF ++S +E+ P + HY C+VDLL R G L+EA+ +V++MP++PN +V G L+G C
Sbjct: 342 TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEK 401
Query: 434 HGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMS 493
G +++AE + +VE++P N +++L+N+YAL G + R+++K + + K+P S
Sbjct: 402 FGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 138/318 (43%), Gaps = 43/318 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK+LH+VA G + F + + +Y +ARK+FDE P+ S + A+I
Sbjct: 136 GKELHSVAVRLGFVGDE--FCESGFITLYCKAGEFENARKVFDENPERKLGS--WNAIIG 191
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
E++++F++M++ GL D LGD ++ Q+H V++ +
Sbjct: 192 GLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEE 251
Query: 153 CTRV--CNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
+ + N+++D+Y K G + A +F E+ +VVS
Sbjct: 252 KSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVS----------------------- 288
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
W+ MIVGY NG T EA ++M G N +T VLSAC G V
Sbjct: 289 --------WSSMIVGYAANGNTLEALECFRQMR-EFGVRPNKITFVGVLSACVHGGLVEE 339
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR-NVVAWNAVLGGL 329
G+ + G+ +VD+ ++ G++ A V + M + NV+ W ++GG
Sbjct: 340 GKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGC 399
Query: 330 AMHGMGKAVVDMFPHMVE 347
G + + P+MVE
Sbjct: 400 EKFGDVEMAEWVAPYMVE 417
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/449 (30%), Positives = 234/449 (52%), Gaps = 10/449 (2%)
Query: 50 LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR----RCPPLESLQ 105
+ P+ +A++ YA C + +R LFD +S++ + + ++I +E+L
Sbjct: 248 IREPDDHSLSALISGYANCGRVNESRGLFDR--KSNRCVILWNSMISGYIANNMKMEALV 305
Query: 106 LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYV 165
LF EMR D LG G Q+H KFG V + ++D+Y
Sbjct: 306 LFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 166 KFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVG 225
K G EA K+F E+E + ++ ++ + VF+ + ++ ++W M G
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 424
Query: 226 YVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWD 285
+ NG T E +M + V+L SV+SAC+ + +G V A +G D
Sbjct: 425 FSQNGCTVETLEYFHQM-HKLDLPTDEVSLSSVISACASISSLELGEQVFARAT-IVGLD 482
Query: 286 LGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM 345
+V +SL+D+Y KCG + VF M + + V WN+++ G A +G G +D+F M
Sbjct: 483 SDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM 542
Query: 346 -VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGH 404
V ++P +TFM +L+AC++ GLVE+GR+ F ++ + P+ EH++CMVDLL RAG+
Sbjct: 543 SVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGY 602
Query: 405 LEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNM 464
+EEA LV++MP + + S+L C A+G + +K +++E++P N+ ++ LS +
Sbjct: 603 VEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAI 662
Query: 465 YALSGKVEKANSFRRVLKKRGIRKVPGMS 493
+A SG E + R+++++ + K PG S
Sbjct: 663 FATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 183/414 (44%), Gaps = 46/414 (11%)
Query: 59 NAILHVYAACALPSHARKLFDEIPQSHKDSVDYTAL----IRRCPPLESLQLFIEMRQLG 114
N ++ +A S AR+LF+ +P+ KD V +L I E+L+LF ++L
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPE--KDVVTLNSLLHGYILNGYAEEALRLF---KELN 182
Query: 115 LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEAR 174
S D L G Q+H+ ++ G +++ ++++++Y K G L A
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 175 KVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
+ +I P S + ++ G V R +FD R + W MI GY+ N E
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
A L EM + TL +V++AC G + G+ +H A K G ++V ++L
Sbjct: 303 ALVLFNEMRNET--REDSRTLAAVINACIGLGFLETGKQMHCHACK-FGLIDDIVVASTL 359
Query: 295 VDMYAK-------------------------------CGRISIALVVFKNMSRRNVVAWN 323
+DMY+K CGRI A VF+ + +++++WN
Sbjct: 360 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Query: 324 AVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESV 382
++ G + +G ++ F M + ++ D V+ +++SAC+ +E G Q F ++
Sbjct: 420 SMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR-ATI 478
Query: 383 YEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGK 436
+ + + ++DL + G +E + M ++ +EV S++ +G+
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQ 531
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 149/321 (46%), Gaps = 38/321 (11%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
N +++ Y+ G G + + F + SW VV+ G K + R +F+ MPE++ V
Sbjct: 97 NTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVV 156
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
++ GY+ NG+ +EA L KE+ F + +TL +VL AC++ + G+ +H
Sbjct: 157 TLNSLLHGYILNGYAEEALRLFKEL----NFSADAITLTTVLKACAELEALKCGKQIHA- 211
Query: 278 AVKAMGWDLGVMVGTSLVDMYAK-------------------------------CGRISI 306
+ G + + +SLV++YAK CGR++
Sbjct: 212 QILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNE 271
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHS 366
+ +F S R V+ WN+++ G + M + +F M E + D+ T A+++AC
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGL 331
Query: 367 GLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGS 426
G +E G+Q + + +I + ++D+ + G EA L ++ + ++L S
Sbjct: 332 GFLETGKQ-MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE-SYDTILLNS 389
Query: 427 LLGSCYAHGKLQLAEKIVREL 447
++ ++ G++ A+++ +
Sbjct: 390 MIKVYFSCGRIDDAKRVFERI 410
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 19/247 (7%)
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR 317
+L +CS + R +G +K V+V L+ MY++ G++ IA +F M R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 318 NVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFR 377
N +WN ++ G G + F M E D ++ ++S + +G + R+ F
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPER---DGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 378 DLESVYEIRPEIEHYACMVDLLGR--AGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHG 435
+ PE + L G G+ EEA L K++ + + L ++L +C
Sbjct: 149 AM-------PEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELE 201
Query: 436 KLQLAEKIVREL----VEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPG 491
L+ ++I ++ VE D ++ + L N+YA G + A+ +++ +
Sbjct: 202 ALKCGKQIHAQILIGGVECD---SKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSA 258
Query: 492 MSSIYVD 498
+ S Y +
Sbjct: 259 LISGYAN 265
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 195/361 (54%), Gaps = 36/361 (9%)
Query: 138 GPQVHSGVVKF--GFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGV 195
G +H+ V+KF V A++ Y G L EAR +F I P + +W +L
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 196 VKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTL 255
E ++S +E L M N ++L
Sbjct: 192 ANSEEIDSD----------------------------EEVLLLFMRM----QVRPNELSL 219
Query: 256 CSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
+++ +C+ G+ G W H + +K L VGTSL+D+Y+KCG +S A VF MS
Sbjct: 220 VALIKSCANLGEFVRGVWAHVYVLKN-NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMS 278
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQ 374
+R+V +NA++ GLA+HG G+ ++++ ++ + + PD+ TF+ +SACSHSGLV++G Q
Sbjct: 279 QRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQ 338
Query: 375 YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAH 434
F +++VY I P++EHY C+VDLLGR+G LEEAE +KKMP++PN + S LGS H
Sbjct: 339 IFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTH 398
Query: 435 GKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSS 494
G + E ++ L+ ++ N+ ++LLSN+YA + R ++K + K PG+S+
Sbjct: 399 GDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIST 458
Query: 495 I 495
+
Sbjct: 459 L 459
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/572 (28%), Positives = 268/572 (46%), Gaps = 91/572 (15%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+++H +G ++ +N+IL +YA S ARKLFDE+ S +D + ++ +IR
Sbjct: 144 GEKIHGYVIRSGFCGISSV--QNSILCMYADSDSLS-ARKLFDEM--SERDVISWSVVIR 198
Query: 97 RC----PPLESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
P+ L+LF EM + D + D +VG VH ++ GF
Sbjct: 199 SYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFD 258
Query: 152 KC-TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVK------------- 197
VCN+++D+Y K + A +VF E ++VSW +L G V
Sbjct: 259 LADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHL 318
Query: 198 --WEGVESGRVV---------FDGMP---------------ERNEVAWTVMIVGYVGNGF 231
E VE V F P E NEVA + +I Y
Sbjct: 319 MVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSL 378
Query: 232 TKEAFWLLKEMVF----GCGFEL-----------------------NCVTLCSVLSACSQ 264
+A +L M + C + N +T+ S+L+ACS
Sbjct: 379 VDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSV 438
Query: 265 SGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNA 324
S D+ +W HG A++ + VGTS+VD YAKCG I +A F ++ +N+++W
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTV 498
Query: 325 VLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVY 383
++ A++G+ + +F M ++ P+AVT++A LSAC+H GLV++G F+ +
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVE-E 557
Query: 384 EIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP--IRPNEVVLGSLLGSCYAH-GKLQLA 440
+ +P ++HY+C+VD+L RAG ++ A L+K +P ++ G++L C KL +
Sbjct: 558 DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIIT 617
Query: 441 EKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQ 500
++V E++E++PL + ++L S+ +A E RR++K+R +R V G S +
Sbjct: 618 SEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNL 677
Query: 501 LHQFSAGDKSHPRTSEIY---------LKLDD 523
+F AGDK SE+ +KLDD
Sbjct: 678 AKRFLAGDKLSQSDSELNDVVQSLHRCMKLDD 709
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 224/538 (41%), Gaps = 99/538 (18%)
Query: 55 LFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYT----ALIRRCPPLESLQLFIEM 110
LF N+I Y C + FD + +DSV + L+ E L F ++
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFD--CMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKL 118
Query: 111 RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLL 170
R G + L G ++H V++ GF + V N+++ +Y L
Sbjct: 119 RVWGFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDSL 176
Query: 171 GEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNG 230
S R +FD M ER+ ++W+V+I YV +
Sbjct: 177 --------------------------------SARKLFDEMSERDVISWSVVIRSYVQSK 204
Query: 231 FTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLG-VM 289
L KEMV E +CVT+ SVL AC+ D+ VGR VHGF+++ G+DL V
Sbjct: 205 EPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIR-RGFDLADVF 263
Query: 290 VGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE- 348
V SL+DMY+K + A VF + RN+V+WN++L G + ++MF MV+E
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 349 VKPDAVTFMALLSACS-----------HSGLVEQGRQ-----------------YFRDLE 380
V+ D VT ++LL C H ++ +G + D
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 381 SVYEIRPEIEHYAC--MVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ 438
+V + + +C M+ L AG +EA + M PN + + SLL +C L+
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLR 443
Query: 439 LAE----KIVRELVEMDPLNTEYHILLSNMYALSGKVEKA-NSFRRVLKKRGIRKVPGMS 493
++ +R + ++ ++ I+ + YA G +E A +F ++ +K I +S
Sbjct: 444 TSKWAHGIAIRRSLAINDISVGTSIV--DAYAKCGAIEMARRTFDQITEKNIISWTVIIS 501
Query: 494 SIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPN--TTCQVLFGCSSSG 549
+ ++G DK+ L L D ++ GY PN T L C+ G
Sbjct: 502 AYAING------LPDKA--------LALFD---EMKQKGYTPNAVTYLAALSACNHGG 542
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 202/401 (50%), Gaps = 41/401 (10%)
Query: 46 VTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVD---YTALIRRCPPLE 102
V L SP+ F N ++ + P A LF + SH+ D + +I+ C
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 103 SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMD 162
S++L G QVH +K GF N +MD
Sbjct: 134 SIRL-------------------------------GTQVHGLAIKAGFFNDVFFQNTLMD 162
Query: 163 LYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVM 222
LY K G RKVF ++ S+VSWT +L G+V ++S +VF+ MP RN V+WT M
Sbjct: 163 LYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAM 222
Query: 223 IVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAM 282
I YV N EAF L + M + N T+ ++L A +Q G + +GRWVH +A K
Sbjct: 223 ITAYVKNRRPDEAFQLFRRMQVD-DVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKN- 280
Query: 283 GWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMF 342
G+ L +GT+L+DMY+KCG + A VF M +++ WN+++ L +HG G+ + +F
Sbjct: 281 GFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLF 340
Query: 343 --PHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLG 400
V+PDA+TF+ +LSAC+++G V+ G +YF + VY I P EH ACM+ LL
Sbjct: 341 EEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLE 400
Query: 401 RAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAE 441
+A +E+A LV+ M P+ S G+ Y G + E
Sbjct: 401 QALEVEKASNLVESMDSDPD---FNSSFGNEYTDGMNETNE 438
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 146/523 (27%), Positives = 242/523 (46%), Gaps = 41/523 (7%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+QLH V TG + F ++++H+Y+ C +F+ DSV A+I
Sbjct: 144 GEQLHGVLVKTG--NDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIA 201
Query: 97 ----------------RCPPL--------------------ESLQLFIEMRQLGLSIDXX 120
R P L E+L++ + M + GL D
Sbjct: 202 AYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEH 261
Query: 121 XXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEI 180
L +G +VH+ V+K G V + ++D+Y K G + A
Sbjct: 262 SFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLY 321
Query: 181 EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLK 240
++ S + ++ G + + +FD + E+N V WT M +GY+ L +
Sbjct: 322 GFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELAR 381
Query: 241 EMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAK 300
+ + + + SVL ACS + G+ +HG +++ G + + T+ VDMY+K
Sbjct: 382 AFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLVTAFVDMYSK 440
Query: 301 CGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMAL 359
CG + A +F + R+ V +NA++ G A HG F M E KPD +TFMAL
Sbjct: 441 CGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMAL 500
Query: 360 LSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA-ELLVKKMPIR 418
LSAC H GLV +G +YF+ + Y I PE HY CM+DL G+A L++A EL+ +
Sbjct: 501 LSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVE 560
Query: 419 PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFR 478
+ V+LG+ L +C + +L +++ +L+ ++ N +I ++N YA SG+ ++ R
Sbjct: 561 KDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIR 620
Query: 479 RVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKL 521
++ + + G S +D Q H F++ D SH T IY L
Sbjct: 621 HQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 40/256 (15%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP-ERNE 216
N +++LY K GLL EAR VF E+ +V SW V+ VK+ V+ R +F+ ER+
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDL 86
Query: 217 VAWTVMIVGYV-GNGFTKEAFWLLKEMVFGCGFE--LNCVTLCSVLSACSQSGDVCVGRW 273
+ + ++ G+ +G EA + EM + ++ T+ +++ ++ +V G
Sbjct: 87 ITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQ 146
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGR------------------------------ 303
+HG VK G D +SL+ MY+KCG+
Sbjct: 147 LHGVLVKT-GNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCR 205
Query: 304 ---ISIALVVF-KNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMA 358
I AL VF +N + ++WN ++ G A +G + + M M E +K D +F A
Sbjct: 206 EGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGA 265
Query: 359 LLSACSHSGLVEQGRQ 374
+L+ S ++ G++
Sbjct: 266 VLNVLSSLKSLKIGKE 281
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 228/481 (47%), Gaps = 45/481 (9%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPL---------ESL 104
++ +R A+L +YA A KLF +P K+ V Y A+I + E+
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPS--KNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 105 QLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLY 164
+LF++M++ GL G Q+H+ + K F + +A+++LY
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY 403
Query: 165 VKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIV 224
G + + F + SWT ++D V+ E +ES
Sbjct: 404 ALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLES--------------------- 442
Query: 225 GYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGW 284
AF L +++ F T+ ++SAC+ + G + G+A+K+ G
Sbjct: 443 ----------AFDLFRQL-FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKS-GI 490
Query: 285 DLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPH 344
D V TS + MYAK G + +A VF + +V ++A++ LA HG +++F
Sbjct: 491 DAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFES 550
Query: 345 M-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAG 403
M +KP+ F+ +L AC H GLV QG +YF+ +++ Y I P +H+ C+VDLLGR G
Sbjct: 551 MKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTG 610
Query: 404 HLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSN 463
L +AE L+ + + V +LL SC + + +++ L+E++P + ++LL N
Sbjct: 611 RLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHN 670
Query: 464 MYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDD 523
+Y SG A R +++ RG++K P +S I + Q H F+ D SHP + IY L+
Sbjct: 671 IYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLET 730
Query: 524 M 524
M
Sbjct: 731 M 731
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 191/460 (41%), Gaps = 84/460 (18%)
Query: 64 VYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQLFIEMRQLGLSIDX 119
+Y C AR+LFD +P+ ++ + + +LI + ++++LF+E R+ L +D
Sbjct: 91 MYCKCRELGFARQLFDRMPE--RNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDK 148
Query: 120 XXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGE 179
D ++G +H VV G + + N ++D+Y K G L +A +F
Sbjct: 149 FTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR 208
Query: 180 IEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLL 239
+ VSW +I GYV G +E LL
Sbjct: 209 CDERDQVSW-------------------------------NSLISGYVRVGAAEEPLNLL 237
Query: 240 KEMVFGCGFELNCVTLCSVLSACS---QSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVD 296
+M G L L SVL AC G + G +H + K +G + ++V T+L+D
Sbjct: 238 AKM-HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK-LGMEFDIVVRTALLD 295
Query: 297 MYAKCGRISIALVVFKNMSRRNVVAWNAVLGG-LAMHGM----GKAVVDMFPHMVEE-VK 350
MYAK G + A+ +F M +NVV +NA++ G L M + +F M ++
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Query: 351 PDAVTFMALLSACSHSGLVEQGRQY--------FRDLE-------SVYEI---------- 385
P TF +L ACS + +E GRQ F+ E +Y +
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 386 -----RPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKL 437
+ +I + M+D + LE A L +++ IRP E + ++ +C L
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 438 QLAEKIVRELVE--MDPLNTEYHILLSNMYALSGKVEKAN 475
E+I ++ +D + +S MYA SG + AN
Sbjct: 476 SSGEQIQGYAIKSGIDAFTSVKTSSIS-MYAKSGNMPLAN 514
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 9/212 (4%)
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR 317
+ ++SG V +G+ HG +K+ + + + +L++MY KC + A +F M R
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKS-SLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPER 111
Query: 318 NVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYF 376
N++++N+++ G G + +++F E +K D T+ L C ++ G +
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELL 170
Query: 377 RDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGK 436
L V + ++ ++D+ + G L++A L + R ++V SL+ + +
Sbjct: 171 HGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER-DQVSWNSLIS---GYVR 226
Query: 437 LQLAEKIVRELVEM--DPLNTEYHILLSNMYA 466
+ AE+ + L +M D LN + L S + A
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKA 258
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 234/502 (46%), Gaps = 54/502 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GKQ+H +A G +L L N++L +YA + A +F E+P+ + V + +I
Sbjct: 268 GKQIHCLALRLGF--GGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEV--NVVSWNIMIV 323
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ +S++ MR G + R GD G ++ S + +
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ----P 379
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGR--- 205
NA++ Y + EA F +++ P + +V+L + +E G+
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIH 439
Query: 206 --------------------------------VVFDGMPERNEVA-WTVMIVGYVGNGFT 232
+FD ++A W MI G+ N
Sbjct: 440 GVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLD 499
Query: 233 KEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGT 292
+A L + M N + +VLS+CS+ + GR HG VK+ G+ V T
Sbjct: 500 TKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKS-GYVSDSFVET 558
Query: 293 SLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKP 351
+L DMY KCG I A F + R+N V WN ++ G +G G V ++ M+ KP
Sbjct: 559 ALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKP 618
Query: 352 DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELL 411
D +TF+++L+ACSHSGLVE G + ++ ++ I PE++HY C+VD LGRAG LE+AE L
Sbjct: 619 DGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKL 678
Query: 412 VKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKV 471
+ P + + V+ LL SC HG + LA ++ +L+ +DP ++ ++LLSN Y+ +
Sbjct: 679 AEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQW 738
Query: 472 EKANSFRRVLKKRGIRKVPGMS 493
+ + + + ++ K + K PG S
Sbjct: 739 DDSAALQGLMNKNRVHKTPGQS 760
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 182/394 (46%), Gaps = 62/394 (15%)
Query: 138 GPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVK 197
G +H +V+ G T +CN ++DLY++ G ARKVF E+ V V SW L K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 198 WEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCS 257
+ VFDGMPER+ V+W MI V GF ++A + K MV GF + TL S
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCD-GFLPSRFTLAS 143
Query: 258 VLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRI-SIALVVFKNMSR 316
VLSACS+ D G HG AVK G D + VG +L+ MYAKCG I + VF+++S+
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKT-GLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 317 RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQY 375
N V++ AV+GGLA V MF M E+ V+ D+V +LS + R+
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS-------ISAPREG 255
Query: 376 FRDLESVY--EIRPEIEHYA-------------CMVDLLGRAGHLEEAELLVKKMP---- 416
L +Y E+ +I A ++++ + + AEL+ +MP
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 417 ------------------------------IRPNEVVLGSLLGSCYAHGKLQLAEKIVRE 446
+PNEV S+LG+C+ G ++ +I
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 447 LVEMDPLNTEYHILLSNMYALSGKVEKANSFRRV 480
+ + P + ++ +LS E ++FR++
Sbjct: 376 IPQ--PSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 200/485 (41%), Gaps = 91/485 (18%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIP-------------- 82
GK +H G+ S + +L N +L +Y C +ARK+FDE+
Sbjct: 25 GKVIHGFIVRMGMKS--DTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 83 ---------------QSHKDSVDY----TALIRRCPPLESLQLFIEMRQLGLSIDXXXXX 123
+D V + + L+R+ ++L ++ M G
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 124 XXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVP 183
++ D G + H VK G K V NA++ +Y K G +
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI------------- 189
Query: 184 SVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMV 243
V+ G VF+ + + NEV++T +I G EA + + M
Sbjct: 190 -----------------VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMC 232
Query: 244 FGCGFELNCVTLCSVLS------ACSQSGDVC---VGRWVHGFAVKAMGWDLGVMVGTSL 294
G +++ V L ++LS C ++ +G+ +H A++ +G+ + + SL
Sbjct: 233 EK-GVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALR-LGFGGDLHLNNSL 290
Query: 295 VDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDA 353
+++YAK ++ A ++F M NVV+WN ++ G V+ M + +P+
Sbjct: 291 LEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNE 350
Query: 354 VTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVK 413
VT +++L AC SG VE GR+ F + +P + + M+ H EEA +
Sbjct: 351 VTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFR 405
Query: 414 KMP---IRPNEVVLGSLLGSCYAHGKLQLAE--KIVRELVEMDPLNTEYHILLSNMYALS 468
+M ++P++ L +L SC +L+ E K + +V ++ HI +S + A+
Sbjct: 406 QMQFQNLKPDKTTLSVILSSC---ARLRFLEGGKQIHGVVIRTEISKNSHI-VSGLIAVY 461
Query: 469 GKVEK 473
+ EK
Sbjct: 462 SECEK 466
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 187/323 (57%), Gaps = 17/323 (5%)
Query: 189 TVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYV-----GNGFTKEAFWLLKEM- 242
T +L K + R VFD MPER V W MI GY GN ++A L +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 243 VFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGW--DLGVMVGTSLVDMYAK 300
G G T+ VLSA SQ+G + +G VHG+ ++ +G+ ++ V +GT+LVDMY+K
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY-IEKLGFTPEVDVFIGTALVDMYSK 269
Query: 301 CGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMAL 359
CG ++ A VF+ M +NV W ++ GLA++G G ++ M E +KP+ +TF +L
Sbjct: 270 CGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSL 329
Query: 360 LSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRP 419
LSA H GLVE+G + F+ +++ + + P IEHY C+VDLLG+AG ++EA + MPI+P
Sbjct: 330 LSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKP 389
Query: 420 NEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNT-------EYHILLSNMYALSGKVE 472
+ ++L SL +C +G+ + E+I + L+E++ + E ++ LSN+ A GK
Sbjct: 390 DAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWV 449
Query: 473 KANSFRRVLKKRGIRKVPGMSSI 495
+ R+ +K+R I+ PG S +
Sbjct: 450 EVEKLRKEMKERRIKTRPGYSFV 472
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 17/228 (7%)
Query: 270 VGRWVHGFAVKAMGWDL-GVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
VGR VHG VK +G+ ++GT+L+ YAK G + A VF M R V WNA++GG
Sbjct: 129 VGRIVHGM-VKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 329 L------AMHGMGKAVV--DMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLE 380
H KA+V F V+P T + +LSA S +GL+E G +E
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 381 SVYEIRPEIEHY--ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ 438
+ PE++ + +VD+ + G L A + + M ++ N S+ +G+
Sbjct: 248 KL-GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLALNGRGN 305
Query: 439 LAEKIVRELVE--MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKR 484
++ + E + P + LLS Y G VE+ + +K R
Sbjct: 306 ETPNLLNRMAESGIKPNEITFTSLLS-AYRHIGLVEEGIELFKSMKTR 352
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 95/232 (40%), Gaps = 38/232 (16%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQ------------- 83
G+ +H + G L L + +LH YA +ARK+FDE+P+
Sbjct: 130 GRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 84 -SHKDSVDYTA-----LIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNV 137
SHKD ++ A L RR S G+ + G +
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGS----------GVRPTDTTMVCVLSAISQTGLLEI 238
Query: 138 GPQVHSGVVKFGFGKCTRVC--NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGV 195
G VH + K GF V A++D+Y K G L A VF ++V +V +WT + G+
Sbjct: 239 GSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGL 298
Query: 196 -VKWEGVES----GRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEM 242
+ G E+ R+ G+ + NE+ +T ++ Y G +E L K M
Sbjct: 299 ALNGRGNETPNLLNRMAESGI-KPNEITFTSLLSAYRHIGLVEEGIELFKSM 349
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 217/401 (54%), Gaps = 16/401 (3%)
Query: 102 ESLQLFIEMRQ-LGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAV 160
++L LF++M L +D P +G VH+ VK F V A+
Sbjct: 30 QALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCAL 89
Query: 161 MDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLD-----GVVKWEGVESGRVVFDGMPERN 215
+D+Y K + ARK+F EI + V W ++ G VK E VE + D MP N
Sbjct: 90 LDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK-EAVELYEAM-DVMP--N 145
Query: 216 EVAWTVMIVGYVG--NGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
E ++ +I G VG +G + + K + F F+ N +TL +++SACS G + +
Sbjct: 146 ESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFR--FKPNLITLLALVSACSAIGAFRLIKE 203
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
+H +A + + + + + LV+ Y +CG I +VF +M R+VVAW++++ A+HG
Sbjct: 204 IHSYAFRNL-IEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHG 262
Query: 334 MGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
++ + F M + +V PD + F+ +L ACSH+GL ++ YF+ ++ Y +R +HY
Sbjct: 263 DAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHY 322
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
+C+VD+L R G EEA +++ MP +P G+LLG+C +G+++LAE REL+ ++P
Sbjct: 323 SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEP 382
Query: 453 LNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMS 493
N ++LL +Y G+ E+A R +K+ G++ PG S
Sbjct: 383 ENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 135/323 (41%), Gaps = 49/323 (15%)
Query: 217 VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHG 276
++ T + Y G ++A L +M L+ L +C+ + +G VH
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 277 FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGK 336
+VK+ + VG +L+DMY KC +S A +F + +RN V WNA++ G K
Sbjct: 73 HSVKS-NFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 337 AVVDMFP---------------------------------HMVE-EVKPDAVTFMALLSA 362
V+++ M+E KP+ +T +AL+SA
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 363 CSHSG---LVEQGRQY-FRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
CS G L+++ Y FR+L I P + + +V+ GR G + +L+ M R
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNL-----IEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 419 PNEVVLGSLLGSCYA-HGKLQLAEKIVR--ELVEMDPLNTEYHILLSNMYALSGKVEKAN 475
+VV S L S YA HG + A K + EL ++ P + + +L E
Sbjct: 247 --DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV 304
Query: 476 SFRRVLKKRGIRKVPGMSSIYVD 498
F+R+ G+R S VD
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVD 327
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 227/465 (48%), Gaps = 42/465 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVD-----Y 91
GKQLH +GL SSP F +A++ +Y+ C +A +F + + SV
Sbjct: 257 GKQLHCCVVKSGLESSP--FAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 92 TALIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
+ + +L L +++ Q L D + +G QVHS VV G+
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE 374
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
V + ++DL+ G + +A K+F +
Sbjct: 375 LDYIVGSILVDLHANVGNIQDAHKLFHR-------------------------------L 403
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
P ++ +A++ +I G V +GF AF+L +E++ G + + + ++L CS + G
Sbjct: 404 PNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI-KLGLDADQFIVSNILKVCSSLASLGWG 462
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+ +HG +K G++ + T+LVDMY KCG I +V+F M R+VV+W ++ G
Sbjct: 463 KQIHGLCIKK-GYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQ 521
Query: 332 HGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+G + F M+ ++P+ VTF+ LLSAC HSGL+E+ R ++S Y + P +E
Sbjct: 522 NGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLE 581
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HY C+VDLLG+AG +EA L+ KMP+ P++ + SLL +C H L I +L++
Sbjct: 582 HYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKG 641
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
P + + LSN YA G ++ + R KK G ++ GMS I
Sbjct: 642 FPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKE-SGMSWI 685
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 199/427 (46%), Gaps = 26/427 (6%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+ + A G+ S N+F+ N ++ +Y L S A K+FDE+ S ++ V +T ++
Sbjct: 24 GESIQAHVIKQGI--SQNVFIANNVISMYVDFRLLSDAHKVFDEM--SERNIVTWTTMVS 79
Query: 97 ----RCPPLESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
P ++++L+ M + + +GD +G V+ + K
Sbjct: 80 GYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLR 139
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ N+V+D+YVK G L EA F EI PS SW ++ G K ++ +F M
Sbjct: 140 GDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM 199
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGC---GFELNCVTLCSVLSACSQSGDV 268
P+ N V+W +I G+V G + +L++ G GF L C L ACS G +
Sbjct: 200 PQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPC-----GLKACSFGGLL 254
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVF---KNMSRRNVVAWNAV 325
+G+ +H VK+ G + ++L+DMY+ CG + A VF K +V WN++
Sbjct: 255 TMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 326 LGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQ-YFRDLESVY 383
L G ++ +A + + + + ++ D+ T L C + + G Q + + S Y
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 384 EIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKI 443
E+ + + +VDL G++++A L ++P + + L+ C G LA +
Sbjct: 374 ELDYIVG--SILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYL 430
Query: 444 VRELVEM 450
REL+++
Sbjct: 431 FRELIKL 437
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 231/453 (50%), Gaps = 45/453 (9%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI-----RRCPPLESLQLFI 108
NL +R+A+L +YA C AR FD + + +D V + A+I C S LF
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKE--RDLVSWNAMIDGYTANACAD-TSFSLFQ 203
Query: 109 EMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFG 168
M G D + + ++H +K GFG+ + + ++++ YVK G
Sbjct: 204 LMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCG 263
Query: 169 LLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVG 228
L A K+ +G +R+ ++ T +I G+
Sbjct: 264 SLANAWKLH-------------------------------EGTKKRDLLSCTALITGFSQ 292
Query: 229 -NGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLG 287
N T +AF + K+M+ +++ V + S+L C+ V +GR +HGFA+K+
Sbjct: 293 QNNCTSDAFDIFKDMI-RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFD 351
Query: 288 VMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV- 346
V +G SL+DMYAK G I A++ F+ M ++V +W +++ G HG + +D++ M
Sbjct: 352 VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEH 411
Query: 347 EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLE 406
E +KP+ VTF++LLSACSH+G E G + + + + + I EH +C++D+L R+G+LE
Sbjct: 412 ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLE 471
Query: 407 EAELLV--KKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNM 464
EA L+ K+ + + G+ L +C HG +QL++ +L+ M+P +I L+++
Sbjct: 472 EAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASV 531
Query: 465 YALSGKVEKANSFRRVLKKRG-IRKVPGMSSIY 496
YA +G + A + R+++K+ G K PG S +Y
Sbjct: 532 YAANGAWDNALNTRKLMKESGSCNKAPGYSLVY 564
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 204/489 (41%), Gaps = 81/489 (16%)
Query: 40 LHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCP 99
+H + G S NL L++ ++ +Y HARKLFD I S +D V +TA+I R
Sbjct: 34 IHGNSITNGFCS--NLQLKDMLIDLYLKQGDVKHARKLFDRI--SKRDVVSWTAMISRFS 89
Query: 100 PL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTR 155
++L LF EM + + + LG G Q+H V K
Sbjct: 90 RCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLI 149
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERN 215
V +A++ LY + G + EAR F ++ +VSW ++D
Sbjct: 150 VRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMID---------------------- 187
Query: 216 EVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVH 275
GY N +F L + M+ G + +C T S+L A + + +H
Sbjct: 188 ---------GYTANACADTSFSLFQLMLTE-GKKPDCFTFGSLLRASIVVKCLEIVSELH 237
Query: 276 GFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMG 335
G A+K +G+ + SLV+ Y KCG ++ A + + +R++++ A++ G +
Sbjct: 238 GLAIK-LGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 296
Query: 336 KA-VVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYA 393
+ D+F M+ + K D V ++L C+ V GRQ +IR ++
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 356
Query: 394 CMVDLLGRAGHLEEAELLVKKMP----------------------------------IRP 419
++D+ ++G +E+A L ++M I+P
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416
Query: 420 NEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNT-EYHI-LLSNMYALSGKVEKANSF 477
N+V SLL +C G+ +L KI ++ + E H+ + +M A SG +E+A +
Sbjct: 417 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 476
Query: 478 RRVLKKRGI 486
R K GI
Sbjct: 477 IR--SKEGI 483
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 226/460 (49%), Gaps = 41/460 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G +H + G ++ + + + Y C ARK+F E+P+ +++V +TAL+
Sbjct: 129 GSSVHGLVLRIGF--DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPE--RNAVSWTALVV 184
Query: 97 RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRV 156
L+ M L + + N+G
Sbjct: 185 AYVKSGELEEAKSMFDL------------------MPERNLGSW---------------- 210
Query: 157 CNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNE 216
NA++D VK G L A+K+F E+ ++S+T ++DG K + S R +F+ +
Sbjct: 211 -NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDV 269
Query: 217 VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHG 276
AW+ +I+GY NG EAF + EM + + + ++SACSQ G + V
Sbjct: 270 RAWSALILGYAQNGQPNEAFKVFSEMC-AKNVKPDEFIMVGLMSACSQMGCFELCEKVDS 328
Query: 277 FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGK 336
+ + M V +L+DM AKCG + A +F+ M +R++V++ +++ G+A+HG G
Sbjct: 329 YLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGS 388
Query: 337 AVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACM 395
+ +F MV+E + PD V F +L C S LVE+G +YF + Y I +HY+C+
Sbjct: 389 EAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCI 448
Query: 396 VDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNT 455
V+LL R G L+EA L+K MP + GSLLG C HG ++AE + R L E++P +
Sbjct: 449 VNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSA 508
Query: 456 EYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
++LLSN+YA + R + + GI K+ G S I
Sbjct: 509 GSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 154/356 (43%), Gaps = 56/356 (15%)
Query: 101 LESLQLFIEMRQLGLS-IDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNA 159
E++ + + M + GL+ D G VG VH V++ GF K V +
Sbjct: 91 FETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTS 150
Query: 160 VMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAW 219
+D Y K L ARKVFGE+ + VSWT ++ VK +E + +FD MPERN +W
Sbjct: 151 FVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSW 210
Query: 220 TVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAV 279
++ G V +G A L EM + + ++ S++ ++ GD+ R
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEMP-----KRDIISYTSMIDGYAKGGDMVSAR---DLFE 262
Query: 280 KAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVV 339
+A G D V ++L+ YA+ G+ + A VF M +N
Sbjct: 263 EARGVD--VRAWSALILGYAQNGQPNEAFKVFSEMCAKN--------------------- 299
Query: 340 DMFPHMVEEVKPDAVTFMALLSACSHSG---LVEQGRQYFRDLESVYEIRPEIEHYA--C 394
VKPD + L+SACS G L E+ Y + + HY
Sbjct: 300 ---------VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPA 345
Query: 395 MVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHG----KLQLAEKIVRE 446
++D+ + GH++ A L ++MP R + V S++ HG ++L EK+V E
Sbjct: 346 LIDMNAKCGHMDRAAKLFEEMPQR-DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE 400
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 136/313 (43%), Gaps = 39/313 (12%)
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
VF+ +P W +I GY E +L M+ + T V+ CS +G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVL 326
V VG VHG ++ +G+D V+VGTS VD Y KC + A VF M RN V+W A++
Sbjct: 125 QVRVGSSVHGLVLR-IGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 327 GGLAMHG---MGKAVVDMFPH------------------------MVEEV-KPDAVTFMA 358
G K++ D+ P + +E+ K D +++ +
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS 243
Query: 359 LLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM--- 415
++ + G + R F + V ++ ++ ++ + G EA + +M
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGV-----DVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 416 PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE-MDPLNTEYHI-LLSNMYALSGKVEK 473
++P+E ++ L+ +C G +L EK+ L + M+ ++ Y + L +M A G +++
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDR 358
Query: 474 ANSFRRVLKKRGI 486
A + +R +
Sbjct: 359 AAKLFEEMPQRDL 371
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 233/489 (47%), Gaps = 44/489 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
GK +HA + S+ + +A+L +Y+ C A +F + + KD V + +LI
Sbjct: 392 GKSVHAELFKRPIQSTSTI--ESALLTLYSKCGCDPDAYLVFKSMEE--KDMVAWGSLIS 447
Query: 96 ---RRCPPLESLQLFIEMRQLGLSI--DXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
+ E+L++F +M+ S+ D L G QVH ++K G
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
V ++++DLY K GL A KVF
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVF-------------------------------TS 536
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
M N VAW MI Y N + + L M+ G + V++ SVL A S + +
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLML-SQGIFPDSVSITSVLVAISSTASLLK 595
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
G+ +HG+ ++ +G + +L+DMY KCG A +FK M ++++ WN ++ G
Sbjct: 596 GKSLHGYTLR-LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654
Query: 331 MHGMGKAVVDMFPHMVEEVK-PDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI 389
HG + +F M + + PD VTF++L+SAC+HSG VE+G+ F ++ Y I P +
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE 449
EHYA MVDLLGRAG LEEA +K MPI + + LL + H ++L +L+
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLR 774
Query: 450 MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDK 509
M+P ++ L N+Y +G +A ++K++G+ K PG S I V + + F +G
Sbjct: 775 MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGS 834
Query: 510 SHPRTSEIY 518
S P +EI+
Sbjct: 835 SSPMKAEIF 843
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 195/453 (43%), Gaps = 63/453 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSH-----KDSVDY 91
GK +H V G P F+ +++++Y C +A ++FD QS +D +
Sbjct: 79 GKTIHGSVVVLGWRYDP--FIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVW 136
Query: 92 TALI------RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGD--PNVGPQVHS 143
++I RR E + F M G+ D + G+ G Q+H
Sbjct: 137 NSMIDGYFKFRRFK--EGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHG 194
Query: 144 GVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVES 203
+++ + + A++D+Y KFGL +A +VF EIE S
Sbjct: 195 FMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS------------------- 235
Query: 204 GRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACS 263
N V W VMIVG+ G+G + + L + +L + L ACS
Sbjct: 236 -----------NVVLWNVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGACS 283
Query: 264 QSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWN 323
QS + GR +H VK MG V TSL+ MY+KCG + A VF + + + WN
Sbjct: 284 QSENSGFGRQIHCDVVK-MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 324 AVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQ-----YFR 377
A++ A + G + +D+F M ++ V PD+ T ++S CS GL G+ + R
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 378 DLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKL 437
++S I + ++ L + G +A L+ K M + V GSL+ +GK
Sbjct: 403 PIQSTSTIE------SALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKF 455
Query: 438 QLAEKIVRELV-EMDPLNTEYHILLSNMYALSG 469
+ A K+ ++ + D L + I+ S A +G
Sbjct: 456 KEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG 488
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 248 FELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
F + T S+L ACS ++ G+ +HG +V +GW + TSLV+MY KCG + A
Sbjct: 56 FWTSVFTFPSLLKACSALTNLSYGKTIHG-SVVVLGWRYDPFIATSLVNMYVKCGFLDYA 114
Query: 308 LVVFKNMSR-------RNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMAL 359
+ VF S+ R+V WN+++ G K V F M V V+PDA + +
Sbjct: 115 VQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIV 174
Query: 360 LSACSHSGLV--EQGRQ 374
+S G E+G+Q
Sbjct: 175 VSVMCKEGNFRREEGKQ 191
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/533 (27%), Positives = 246/533 (46%), Gaps = 83/533 (15%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQ+H++ G + ++ NA++ +Y C + A +F+E + +D V + +I
Sbjct: 208 GKQVHSLVIKAGFFIASSVV--NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVID 265
Query: 97 RCPPL---ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
ESL +F +M + L +G QVH +K G+ K
Sbjct: 266 GLAGFKRDESLLVFRKMLEASL---RPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKY 322
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWE-------------- 199
T V NA M +Y F G A KVF +E +V+W ++ + +
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 200 -GVESGRVVFD----------------------GMPERNEVAWTVMIVGYVGNGFTKEAF 236
GV+ F G+ + E++ +I Y NG ++A
Sbjct: 383 IGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEIS-NALISAYSKNGQIEKAD 441
Query: 237 WLLKEMV--------------------------FGCGFEL------NCVTLCSVLSACSQ 264
L + + F C E + TL ++LS C
Sbjct: 442 LLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVS 501
Query: 265 SGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNA 324
+ + +G H + ++ G ++G +L++MY++CG I +L VF MS ++VV+WN+
Sbjct: 502 TSSLMLGSQTHAYVLR-HGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNS 560
Query: 325 VLGGLAMHGMGKAVVDMFPHMVEEVK--PDAVTFMALLSACSHSGLVEQGRQYFRDLESV 382
++ + HG G+ V+ + M +E K PDA TF A+LSACSH+GLVE+G + F +
Sbjct: 561 LISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEF 620
Query: 383 YEIRPEIEHYACMVDLLGRAGHLEEAELLVK--KMPIRPNEVVLGSLLGSCYAHGKLQLA 440
+ + ++H++C+VDLLGRAGHL+EAE LVK + I V +L +C AHG L+L
Sbjct: 621 HGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLG 680
Query: 441 EKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMS 493
+ + + L+E + + ++ LSN+YA +G ++A RR + G K G S
Sbjct: 681 KMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 207/446 (46%), Gaps = 46/446 (10%)
Query: 92 TALIRRCPPLESLQLFIEM-RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
T L R +L+LF ++ R L D L D G QVH ++ G
Sbjct: 29 TGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGL 88
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
+ V N ++ LY + G L +K F EI+ P V SWT +L K +E VFD
Sbjct: 89 LCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDK 148
Query: 211 MPERNEVA-WTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC 269
MPER++VA W MI G +G+ + + L +EM G + ++LS C G +
Sbjct: 149 MPERDDVAIWNAMITGCKESGYHETSVELFREM-HKLGVRHDKFGFATILSMCDY-GSLD 206
Query: 270 VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFK--NMSRRNVVAWNAVLG 327
G+ VH +KA G+ + V +L+ MY C + A +VF+ +++ R+ V +N V+
Sbjct: 207 FGKQVHSLVIKA-GFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVID 265
Query: 328 GLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACS--------HSGLVEQGRQ---- 374
GLA ++++ +F M+E ++P +TF++++ +CS H ++ G +
Sbjct: 266 GLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTL 324
Query: 375 ----------YFRDLESVYEIRPEIEH-----YACMVDLLGRAGHLEEAELLVKKMPI-- 417
F D + +++ +E + M+ +A + A + K+M I
Sbjct: 325 VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG 384
Query: 418 -RPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHI--LLSNMYALSGKVEKA 474
+P+E GSLL + L++ + + + L+++ I L + Y+ +G++EKA
Sbjct: 385 VKPDEFTFGSLLATSLDLDVLEMVQACIIKF----GLSSKIEISNALISAYSKNGQIEKA 440
Query: 475 N-SFRRVLKKRGIRKVPGMSSIYVDG 499
+ F R L+K I +S Y +G
Sbjct: 441 DLLFERSLRKNLISWNAIISGFYHNG 466
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 245/499 (49%), Gaps = 76/499 (15%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GK +HA A GL ++++ ++ +Y+ A+K FD+I + K++V + +L+
Sbjct: 123 GKPIHAQALKNGLCGC--VYVQTGLVGLYSRLGYIELAKKAFDDIAE--KNTVSWNSLLH 178
Query: 97 RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRV 156
LES +L E R++ I P+ K
Sbjct: 179 GY--LESGEL-DEARRVFDKI---------------------PE-----------KDAVS 203
Query: 157 CNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNE 216
N ++ Y K G +G A +F + + S SW +++ G V ++ R FD MP++N
Sbjct: 204 WNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNG 263
Query: 217 VAWTVMIVGYVG-------------------------------NGFTKEAFWLLKEMVFG 245
V+W MI GY NG K+A L +M+
Sbjct: 264 VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLER 323
Query: 246 CGF-ELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRI 304
+ + + +TL SV+SA SQ G+ G WV + + G + ++ TSL+D+Y K G
Sbjct: 324 NSYIQPDEITLSSVVSANSQLGNTSFGTWVESY-ITEHGIKIDDLLSTSLIDLYMKGGDF 382
Query: 305 SIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSAC 363
+ A +F N+++++ V+++A++ G ++GM +F M+E+ + P+ VTF LLSA
Sbjct: 383 AKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAY 442
Query: 364 SHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVV 423
SHSGLV++G + F ++ + + P +HY MVD+LGRAG LEEA L+K MP++PN V
Sbjct: 443 SHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGV 501
Query: 424 LGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKK 483
G+LL + H ++ E V+++ T Y L+ +Y+ G+ + A + R +K+
Sbjct: 502 WGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKE 561
Query: 484 RGIRKVPGMSSIYVDGQLH 502
+ + K G S +V+G H
Sbjct: 562 KKLCKTLGCS--WVEGSYH 578
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 175/412 (42%), Gaps = 38/412 (9%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
E++ ++I+M G+ ++ + G +H+ +K G C V ++
Sbjct: 87 ETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLV 146
Query: 162 DLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTV 221
LY + G + A+K F +I + VSW +L G ++ ++ R VFD +PE++ V+W +
Sbjct: 147 GLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNL 206
Query: 222 MIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSA----CSQSGDVCVGRWVHGF 277
+I Y G A CS+ SA S ++ +G +V+
Sbjct: 207 IISSYAKKGDMGNA--------------------CSLFSAMPLKSPASWNILIGGYVNCR 246
Query: 278 AVK-------AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
+K AM GV T ++ Y K G + A +F+ MS+++ + ++A++
Sbjct: 247 EMKLARTYFDAMPQKNGVSWIT-MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYT 305
Query: 331 MHGMGKAVVDMFPHMVEE---VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRP 387
+G K + +F M+E ++PD +T +++SA S G G + + + I+
Sbjct: 306 QNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGIKI 364
Query: 388 EIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+ ++DL + G +A + + + + V +++ C +G A + +
Sbjct: 365 DDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAM 423
Query: 448 VEMD-PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVD 498
+E P N L + Y+ SG V++ +K + I VD
Sbjct: 424 IEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVD 475
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 194/361 (53%), Gaps = 6/361 (1%)
Query: 138 GPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVK 197
G +H +K GF V + + Y + G L +RK+F +I P VV+ +LD +
Sbjct: 105 GVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGR 164
Query: 198 WEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFG--CGFELNCVTL 255
++ F MP + V+WT +I G+ G +A + EM+ N T
Sbjct: 165 NGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATF 224
Query: 256 CSVLSACSQ--SGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKN 313
SVLS+C+ G + +G+ +HG+ V + L +GT+L+DMY K G + +AL +F
Sbjct: 225 VSVLSSCANFDQGGIRLGKQIHGY-VMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQ 283
Query: 314 MSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQG 372
+ + V AWNA++ LA +G K ++MF M V P+ +T +A+L+AC+ S LV+ G
Sbjct: 284 IRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
Query: 373 RQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCY 432
Q F + S Y+I P EHY C+VDL+GRAG L +A ++ +P P+ VLG+LLG+C
Sbjct: 344 IQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACK 403
Query: 433 AHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGM 492
H +L + ++L+ + P + ++ LS AL +A R+ + + GIRK+P
Sbjct: 404 IHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAY 463
Query: 493 S 493
S
Sbjct: 464 S 464
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 253/530 (47%), Gaps = 95/530 (17%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRR 97
+ LH++ G+++ + FL LH + +H K + E + K +D+ R+
Sbjct: 6 RHLHSL----GVINKFDSFL----LHFHTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQ 57
Query: 98 CPP-LESLQLFIEMR----QLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
P ++S + ++ Q S+D G Q+H+ V K GF
Sbjct: 58 SPSFVDSFSVLFAIKVSSAQKASSLD-------------------GRQIHALVRKLGFNA 98
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
++ +++ Y G V+ R VFD P
Sbjct: 99 VIQIQTSLVGFYSSVG-------------------------------DVDYARQVFDETP 127
Query: 213 ER-NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
E+ N V WT MI Y N + EA L K M EL+ V + LSAC+ G V +G
Sbjct: 128 EKQNIVLWTAMISAYTENENSVEAIELFKRME-AEKIELDGVIVTVALSACADLGAVQMG 186
Query: 272 RWVHGFAVKA---MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
++ ++K + DL + SL++MY K G A +F R++V + +++ G
Sbjct: 187 EEIYSRSIKRKRRLAMDLTLR--NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFG 244
Query: 329 LAMHGMGKAVVDMFPHM--VEE-----VKPDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
A++G + +++F M +++ + P+ VTF+ +L ACSHSGLVE+G+++F+ +
Sbjct: 245 YALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIM 304
Query: 382 VYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAE 441
Y ++P H+ CMVDL R+GHL++A + +MPI+PN V+ +LLG+C HG ++L E
Sbjct: 305 DYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGE 364
Query: 442 KIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQL 501
++ R + E+D + ++ LSN+YA G ++ + R ++K R++PG S I + +
Sbjct: 365 EVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIELGSII 421
Query: 502 HQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDC 551
++F +G P ++ L + ++ LR L C +S DC
Sbjct: 422 NEFVSG----PDNNDEQLMMGEISEVLR-----------CLVSCMTSFDC 456
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 129/309 (41%), Gaps = 46/309 (14%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+Q+HA+ G + + ++ +++ Y++ +AR++FDE P+ ++ V +TA+I
Sbjct: 84 GRQIHALVRKLGF--NAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK-QNIVLWTAMIS 140
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+E+++LF M + +D LG +G +++S +K
Sbjct: 141 AYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIK----- 195
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
R MDL ++ LL + VK E R +FD
Sbjct: 196 --RKRRLAMDLTLRNSLL----------------------NMYVKSGETEKARKLFDESM 231
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVF-----GCGFELNCVTLCSVLSACSQSGD 267
++ +T MI GY NG +E+ L K+M N VT VL ACS SG
Sbjct: 232 RKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGL 291
Query: 268 VCVGRWVHGFAVKAMGWDLGVMVGT--SLVDMYAKCGRISIALVVFKNMS-RRNVVAWNA 324
V G+ F M ++L +VD++ + G + A M + N V W
Sbjct: 292 VEEGK--RHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRT 349
Query: 325 VLGGLAMHG 333
+LG ++HG
Sbjct: 350 LLGACSLHG 358
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 223/464 (48%), Gaps = 48/464 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G QLH + GL SS F +++H Y C L AR++F+ + +D V + AL+
Sbjct: 161 GIQLHCLMVKQGLESS--CFPSTSLVHFYGKCGLIVEARRVFEAVLD--RDLVLWNALVS 216
Query: 97 RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNV--GPQVHSGVVKFGFGKCT 154
+ + +L S L + G Q+H+ + K +
Sbjct: 217 SYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDI 276
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
V A++++Y K L +AR+ F + M R
Sbjct: 277 PVATALLNMYAKSNHLSDARECF-------------------------------ESMVVR 305
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
N V+W MIVG+ NG +EA L +M+ + + +T SVLS+C++ + + V
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLE-NLQPDELTFASVLSSCAKFSAIWEIKQV 364
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
K D + V SL+ Y++ G +S AL+ F ++ ++V+W +V+G LA HG
Sbjct: 365 QAMVTKKGSADF-LSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGF 423
Query: 335 GKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYAC 394
+ + MF M+++++PD +TF+ +LSACSH GLV++G + F+ + Y+I E EHY C
Sbjct: 424 AEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTC 483
Query: 395 MVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLN 454
++DLLGRAG ++EA ++ MP P+ L + G C H K + + ++L+E++P
Sbjct: 484 LIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTK 543
Query: 455 TEYHILLSNMYALSGKVEKANSFRRVLKKRGIR-----KVPGMS 493
+ +LSN Y G +A +L+KR R K PG S
Sbjct: 544 PVNYSILSNAYVSEGHWNQA----ALLRKRERRNCYNPKTPGCS 583
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 109/236 (46%), Gaps = 15/236 (6%)
Query: 191 VLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVG-NGFTKE----AFWLLKEMVFG 245
+L K + +FD MP RN V W ++I G + +G T F L ++F
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILF- 135
Query: 246 CGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRIS 305
L+ V+ ++ C+ S ++ G +H VK G + TSLV Y KCG I
Sbjct: 136 TDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVK-QGLESSCFPSTSLVHFYGKCGLIV 194
Query: 306 IALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE---VKPDAVTFMALLSA 362
A VF+ + R++V WNA++ ++GM + M + + D TF +LLSA
Sbjct: 195 EARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSA 254
Query: 363 CSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
C +EQG+Q L V + +I ++++ ++ HL +A + M +R
Sbjct: 255 CR----IEQGKQIHAILFKV-SYQFDIPVATALLNMYAKSNHLSDARECFESMVVR 305
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 217/440 (49%), Gaps = 47/440 (10%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPL----ESLQLFIE 109
NL + + ++ +YA+C A ++FD + + + +LI L +++ L+ +
Sbjct: 126 NLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGL 169
M + G+ D +G +G +H +VK GFG V NA++ +Y K G
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 170 LGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGN 229
+ +AR VF D +P ++ V+W M+ GY+ +
Sbjct: 246 IVKARNVF-------------------------------DMIPHKDYVSWNSMLTGYLHH 274
Query: 230 GFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVK-AMGWDLGV 288
G EA + + MV G E + V + SVL+ GR +HG+ ++ M W+L V
Sbjct: 275 GLLHEALDIFRLMVQN-GIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWELSV 330
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE- 347
+L+ +Y+K G++ A +F M R+ V+WNA++ H + F M
Sbjct: 331 --ANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRA 385
Query: 348 EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEE 407
KPD +TF+++LS C+++G+VE G + F + Y I P++EHYACMV+L GRAG +EE
Sbjct: 386 NAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEE 445
Query: 408 A-ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYA 466
A ++V++M + V G+LL +CY HG + E + L E++P N LL +Y+
Sbjct: 446 AYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYS 505
Query: 467 LSGKVEKANSFRRVLKKRGI 486
+ + E R+++ RG+
Sbjct: 506 KAKRAEDVERVRQMMVDRGL 525
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 232/466 (49%), Gaps = 54/466 (11%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GK +H A + S L A++ +YA C S A K F+ +P KD+V + AL +
Sbjct: 420 GKSIHCYAIKADIES--ELETATAVISMYAKCGRFSPALKAFERLPI--KDAVAFNALAQ 475
Query: 97 RCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ ++ ++ M+ G+ D D G V+ ++K GF
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V +A+++++ K L A +F +
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGF------------------------------ 565
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
E++ V+W +M+ GY+ +G +EA ++M F+ N VT +++ A ++ + VG
Sbjct: 566 EKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVE-KFQPNAVTFVNIVRAAAELSALRVGM 624
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
VH ++ G+ VG SLVDMYAKCG I + F +S + +V+WN +L A H
Sbjct: 625 SVHSSLIQC-GFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAH 683
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G+ V +F M E E+KPD+V+F+++LSAC H+GLVE+G++ F ++ ++I E+EH
Sbjct: 684 GLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEH 743
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
YACMVDLLG+AG EA ++++M ++ + V G+LL S H L L+ + +LV+++
Sbjct: 744 YACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLE 803
Query: 452 PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV 497
PLN + Y+ ++ + N+ R I+KVP S I V
Sbjct: 804 PLNPSH-------YSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 167/387 (43%), Gaps = 45/387 (11%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G ++H + GL S ++++ A++ +Y AR++FD++ KD V + ++
Sbjct: 119 GLRIHDLIAEMGLES--DVYIGTALVEMYCKARDLVSARQVFDKMHV--KDVVTWNTMVS 174
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ +L LF +MR + ID +L +V +H V+K GF
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF-- 232
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ ++D+Y L A VF E+ W
Sbjct: 233 IFAFSSGLIDMYCNCADLYAAESVFEEV-----------------WR------------- 262
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
++E +W M+ Y NGF +E L +++ +N V S L A + GD+ G
Sbjct: 263 -KDESSWGTMMAAYAHNGFFEEVLELF-DLMRNYDVRMNKVAAASALQAAAYVGDLVKGI 320
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H +AV+ G V V TSL+ MY+KCG + IA +F N+ R+VV+W+A++
Sbjct: 321 AIHDYAVQ-QGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G + +F M+ +KP+AVT ++L C+ G+ +I E+E
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS-IHCYAIKADIESELET 438
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIR 418
++ + + G A +++PI+
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 172/412 (41%), Gaps = 43/412 (10%)
Query: 40 LHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDS--VDYTALIRR 97
LH + G + + + ++ +Y CA A +F+E+ + + S A
Sbjct: 223 LHGLVIKKGFIFA----FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHN 278
Query: 98 CPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVC 157
E L+LF MR + ++ +GD G +H V+ G V
Sbjct: 279 GFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVA 338
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
++M +Y K G L A ++F IE +R+ V
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIE-------------------------------DRDVV 367
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
+W+ MI Y G EA L ++M+ + N VTL SVL C+ +G+ +H +
Sbjct: 368 SWSAMIASYEQAGQHDEAISLFRDMM-RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCY 426
Query: 278 AVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKA 337
A+KA + + T+++ MYAKCGR S AL F+ + ++ VA+NA+ G G
Sbjct: 427 AIKA-DIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANK 485
Query: 338 VVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGR-QYFRDLESVYEIRPEIEHYACM 395
D++ +M + V PD+ T + +L C+ +G Y + ++ ++ + H +
Sbjct: 486 AFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--AL 543
Query: 396 VDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+++ + L A +L K + V ++ HG+ + A R++
Sbjct: 544 INMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 175 KVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE 234
+V G + V + +++ ++ + RV+FD + + V W MI GY G +E
Sbjct: 23 QVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHRE 82
Query: 235 AFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSL 294
A M G + + + L AC+ S D G +H + MG + V +GT+L
Sbjct: 83 ALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDL-IAEMGLESDVYIGTAL 141
Query: 295 VDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDA 353
V+MY K + A VF M ++VV WN ++ GLA +G A + +F M V D
Sbjct: 142 VEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDH 201
Query: 354 VTFMALLSACS 364
V+ L+ A S
Sbjct: 202 VSLYNLIPAVS 212
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 148/471 (31%), Positives = 238/471 (50%), Gaps = 22/471 (4%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G QLH +A +G +++ +++ +Y+ C A ++F+++P HK V Y A I
Sbjct: 148 GMQLHCLAMKSGF--EMEVYVGTSLVSMYSRCGEWVLAARMFEKVP--HKSVVTYNAFIS 203
Query: 97 RCPPLESLQL----FIEMRQLGLS-IDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
+ L F MR+ + L + G Q+H V+K F
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEI-EVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
T V A++D+Y K A VF E+ + +++SW V+ G++ E+ +F+
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 211 MPER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGF-ELNCVTLCSVLSACSQS 265
+ + W +I G+ G EAF + M+ L C+T S+LSACS
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLT--SLLSACSDI 381
Query: 266 GDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR--NVVAWN 323
+ G+ +HG +KA + + V TSL+DMY KCG S A +F + + V WN
Sbjct: 382 WTLKNGKEIHGHVIKAAA-ERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWN 440
Query: 324 AVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESV 382
++ G HG ++ +++F + EE V+P TF A+LSACSH G VE+G Q FR ++
Sbjct: 441 VMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEE 500
Query: 383 YEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEK 442
Y +P EH CM+DLLGR+G L EA+ ++ +M + V SLLGSC H L E+
Sbjct: 501 YGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYS-SLLGSCRQHLDPVLGEE 559
Query: 443 IVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMS 493
+L E++P N ++LS++YA + E S R+V+ ++ + K+PG+S
Sbjct: 560 AAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 166/356 (46%), Gaps = 43/356 (12%)
Query: 131 RLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTV 190
+LGD G +H+ VVK GF A++ +Y+K + +A KV
Sbjct: 43 KLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL------------- 89
Query: 191 VLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEM-VFGCGFE 249
D MPER + + G + NGF ++AF + + V G G
Sbjct: 90 ------------------DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG-- 129
Query: 250 LNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALV 309
+N VT+ SVL C GD+ G +H A+K+ G+++ V VGTSLV MY++CG +A
Sbjct: 130 MNSVTVASVLGGC---GDIEGGMQLHCLAMKS-GFEMEVYVGTSLVSMYSRCGEWVLAAR 185
Query: 310 VFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM--VEEVKPDAVTFMALLSACSHSG 367
+F+ + ++VV +NA + GL +G+ V +F M +P+ VTF+ ++AC+
Sbjct: 186 MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLL 245
Query: 368 LVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSL 427
++ GRQ L E + E ++D+ + + A ++ ++ N + S+
Sbjct: 246 NLQYGRQ-LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSV 304
Query: 428 LGSCYAHGKLQLAEKIVRELVE--MDPLNTEYHILLSNMYALSGKVEKANSFRRVL 481
+ +G+ + A ++ +L + P + ++ L+S L +E F R+L
Sbjct: 305 ISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 251 NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVV 310
N T +L +C++ GDV GR +H VK G+ + V T+LV MY K +++ AL V
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKT-GFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 311 FKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLV 369
M R + + NA + GL +G + MF V ++VT ++L C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 370 EQGRQ-YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP 416
E G Q + ++S +E+ E+ +V + R G A + +K+P
Sbjct: 146 EGGMQLHCLAMKSGFEM--EVYVGTSLVSMYSRCGEWVLAARMFEKVP 191
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 236/477 (49%), Gaps = 48/477 (10%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
+ HA+ V + ++ L A++ +Y + A +FD++ K+ V +TA+I
Sbjct: 168 ARMFHALVLVDERMQ-ESVLLSTALVDMYLKFDDHAAAFHVFDQMEV--KNEVSWTAMIS 224
Query: 97 RCPPLESLQ----LFIEMRQLGLSIDXXXXXXXXXXXXRLG-DPNVGPQVHSGVVKFGFG 151
C ++ + LF M++ L + L ++ ++H + G
Sbjct: 225 GCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCH 284
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
R+ A M +Y + G V RV+F+
Sbjct: 285 ADERLTAAFMTMYCRCG-------------------------------NVSLSRVLFETS 313
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
R+ V W+ MI GY G E LL +M G E N VTL +++SAC+ S +
Sbjct: 314 KVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE-GIEANSVTLLAIVSACTNSTLLSFA 372
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
VH +K G+ +++G +L+DMYAKCG +S A VF ++ +++V+W++++ +
Sbjct: 373 STVHSQILKC-GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGL 431
Query: 332 HGMGKAVVDMFPHMVE---EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
HG G +++F M++ EV D + F+A+LSAC+H+GLVE+ + F Y +
Sbjct: 432 HGHGSEALEIFKGMIKGGHEV--DDMAFLAILSACNHAGLVEEAQTIFTQ-AGKYHMPVT 488
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIV-REL 447
+EHYAC ++LLGR G +++A + MP++P+ + SLL +C HG+L +A KI+ EL
Sbjct: 489 LEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANEL 548
Query: 448 VEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQF 504
++ +P N ++LLS ++ SG A RRV+++R + K G S I + Q+ +
Sbjct: 549 MKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 206/481 (42%), Gaps = 81/481 (16%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G QLH + G + + + N+++ +YA + RK+FDE+ H+D+V Y ++I
Sbjct: 66 GAQLHCLCLKAG--ADCDTVVSNSLISMYAKFSRKYAVRKVFDEML--HRDTVSYCSIIN 121
Query: 97 RCPP----LESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPN-VGPQVHSGV-VKFGF 150
C E+++L EM G R+G + V H+ V V
Sbjct: 122 SCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERM 181
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
+ + A++D+Y+KF A VF ++EV + VSWT ++ G V + E G +F
Sbjct: 182 QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRA 241
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQ--SGDV 268
M N N VTL SVL AC + G
Sbjct: 242 MQREN--------------------------------LRPNRVTLLSVLPACVELNYGSS 269
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
V + +HGF+ + G + + + MY +CG +S++ V+F+ R+VV W++++ G
Sbjct: 270 LV-KEIHGFSFRH-GCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISG 327
Query: 329 LAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDL-------- 379
A G V+++ M +E ++ ++VT +A++SAC++S L+ +
Sbjct: 328 YAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSH 387
Query: 380 ---------------------ESVYEI-RPEIEHYACMVDLLGRAGHLEEAELLVKKMPI 417
E YE+ ++ ++ M++ G GH EA + K M
Sbjct: 388 ILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIK 447
Query: 418 RPNEV---VLGSLLGSCYAHGKLQLAEKIVRELVEMD-PLNTEYHILLSNMYALSGKVEK 473
+EV ++L +C G ++ A+ I + + P+ E++ N+ GK++
Sbjct: 448 GGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDD 507
Query: 474 A 474
A
Sbjct: 508 A 508
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 161/401 (40%), Gaps = 77/401 (19%)
Query: 137 VGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVV 196
+G Q+H +K G T V N+++ +Y KF RKVF
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVF------------------- 105
Query: 197 KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
D M R+ V++ +I +G EA L+KEM F GF +
Sbjct: 106 ------------DEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYF-YGFIPKSELVA 152
Query: 257 SVLSACSQSGDVC-VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
S+L+ C++ G V R H + V++ T+LVDMY K + A VF M
Sbjct: 153 SLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQME 212
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSH----SGLVE 370
+N V+W A++ G + + VD+F M E ++P+ VT +++L AC S LV+
Sbjct: 213 VKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVK 272
Query: 371 QGRQY-FRD---------------------------LESVYEIRPEIEHYACMVDLLGRA 402
+ + FR L ++R ++ ++ M+
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR-DVVMWSSMISGYAET 331
Query: 403 GHLEEAELLVKKMP---IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHI 459
G E L+ +M I N V L +++ +C L A + ++++ ++ HI
Sbjct: 332 GDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMS---HI 388
Query: 460 LLSN----MYALSGKVEKANSFRRVLKKRGIRKVPGMSSIY 496
LL N MYA G + A L ++ + M + Y
Sbjct: 389 LLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAY 429
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 235/488 (48%), Gaps = 43/488 (8%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GK++H G + ++ +A++ +Y C AR++F ++P+ K V + ++I+
Sbjct: 227 GKEIHRKCVKKGF--ELDEYVNSALVDMYGKCDCLEVAREVFQKMPR--KSLVAWNSMIK 282
Query: 97 ----RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ +++ M G R + G +H V++
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V +++DLY K G A VF + + SW V++ +
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYIS--------------- 387
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
VGN F +A + +MV G + + VT SVL ACSQ + G+
Sbjct: 388 --------------VGNWF--KAVEVYDQMV-SVGVKPDVVTFTSVLPACSQLAALEKGK 430
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H ++ + ++ ++L+DMY+KCG A +F ++ +++VV+W ++ H
Sbjct: 431 QIH-LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSH 489
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G + + F M + +KPD VT +A+LSAC H+GL+++G ++F + S Y I P IEH
Sbjct: 490 GQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEH 549
Query: 392 YACMVDLLGRAGHLEEAELLVKKMP-IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
Y+CM+D+LGRAG L EA ++++ P N +L +L +C H + L ++I R LVE
Sbjct: 550 YSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVEN 609
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKS 510
P + +++L N+YA + A R +K+ G+RK PG S I + ++ F A D+S
Sbjct: 610 YPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRS 669
Query: 511 HPRTSEIY 518
H R +Y
Sbjct: 670 HLRAENVY 677
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 139/554 (25%), Positives = 254/554 (45%), Gaps = 75/554 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+ +H + +G + ++ + ++++ +YA L ++ ++FDE+P+ +D + +I
Sbjct: 126 GRMIHTLVVKSGYVC--DVVVASSLVGMYAKFNLFENSLQVFDEMPE--RDVASWNTVIS 181
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ ++L+LF M G + RL G ++H VK GF
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V +A++D+Y K L AR+VF ++ S+V
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLV-------------------------- 275
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
AW MI GYV G +K +L M+ G + TL S+L ACS+S ++ G+
Sbjct: 276 -----AWNSMIKGYVAKGDSKSCVEILNRMIIE-GTRPSQTTLTSILMACSRSRNLLHGK 329
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
++HG+ ++++ + + V SL+D+Y KCG ++A VF + +WN ++
Sbjct: 330 FIHGYVIRSV-VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISV 388
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G V+++ MV VKPD VTF ++L ACS +E+G+Q S+ E R E +
Sbjct: 389 GNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHL---SISESRLETDE 445
Query: 392 --YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCY-AHGKLQLAEKIVRELV 448
+ ++D+ + G+ +EA + +P +VV +++ S Y +HG+ + A E+
Sbjct: 446 LLLSALLDMYSKCGNEKEAFRIFNSIP--KKDVVSWTVMISAYGSHGQPREALYQFDEMQ 503
Query: 449 EMDPLNTEYHILLSNMYAL--SGKVEKA-NSFRRVLKKRGIRKVPGMSSIYVD-----GQ 500
+ L + LL+ + A +G +++ F ++ K GI + S +D G+
Sbjct: 504 KFG-LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGR 562
Query: 501 LHQFSAGDKSHPRTSE-------------IYLK--LDDMICRLRLAGYVPN-TTCQVLFG 544
L + + P TS+ ++L+ L D I RL + Y + +T VLF
Sbjct: 563 LLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFN 622
Query: 545 CSSSGDCTEALEEV 558
+SG+ +A V
Sbjct: 623 LYASGESWDAARRV 636
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 129/552 (23%), Positives = 225/552 (40%), Gaps = 96/552 (17%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIE 109
++ L ++++VY C AR +F+ D + +L+ + ++L++F
Sbjct: 38 DVVLCKSLINVYFTCKDHCSARHVFENF-DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 110 MRQLGLSI-DXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFG 168
+ + + D LG +G +H+ VVK G+ V ++++ +Y KF
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 169 LLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVG 228
L E+ VFD MPER+ +W +I +
Sbjct: 157 LF-------------------------------ENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 229 NGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGV 288
+G ++A L M GFE N V+L +SACS+ + G+ +H VK G++L
Sbjct: 186 SGEAEKALELFGRME-SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDE 243
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VE 347
V ++LVDMY KC + +A VF+ M R+++VAWN+++ G G K+ V++ M +E
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 348 EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEE 407
+P T ++L ACS S + G+ + + +I ++DL + G
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGK-FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 408 AELLVKKMP----------------------------------IRPNEVVLGSLLGSCYA 433
AE + K ++P+ V S+L +C
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 434 HGKLQLAEKIVRELVEMDPLNTEYHIL--LSNMYALSGKVEKANSFRRVLKKRGIRKVPG 491
L+ ++I + E L T+ +L L +MY+ G ++A + K+ +
Sbjct: 423 LAALEKGKQIHLSISE-SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTV 481
Query: 492 MSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPN--TTCQVLFGCSSSG 549
M S Y G PR E + D+M + G P+ T VL C +G
Sbjct: 482 MISAY----------GSHGQPR--EALYQFDEM----QKFGLKPDGVTLLAVLSACGHAG 525
Query: 550 DCTEALEEVEQV 561
E L+ Q+
Sbjct: 526 LIDEGLKFFSQM 537
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 240/501 (47%), Gaps = 49/501 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GK +HA V+ L+ +L L NA+L +Y +C A +F I + + V + ++I
Sbjct: 319 GKLIHARIIVSDSLA--DLPLDNALLDMYCSCGDMREAFYVFGRI--HNPNLVSWNSIIS 374
Query: 97 RCPP--LESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNV---GPQVHSGVVKFGFG 151
C + + R L +S +P G +H V K G+
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYE 434
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ V ++ +Y K ES + VFD M
Sbjct: 435 RSVFVGTTLLSMYFKN-------------------------------REAESAQKVFDVM 463
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
ER+ V WT MIVG+ G ++ A EM + + +L SV+ ACS + G
Sbjct: 464 KERDVVLWTEMIVGHSRLGNSELAVQFFIEM-YREKNRSDGFSLSSVIGACSDMAMLRQG 522
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
H A++ G+D + V +LVDMY K G+ A +F S ++ WN++LG +
Sbjct: 523 EVFHCLAIRT-GFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQ 581
Query: 332 HGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
HGM + + F ++E PDAVT+++LL+ACSH G QG+ + ++ I+ +
Sbjct: 582 HGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFK 640
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVL-GSLLGSCYAHGKLQLAEKIVRELVE 449
HY+CMV+L+ +AG ++EA L+++ P N+ L +LL +C LQ+ ++++
Sbjct: 641 HYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILK 700
Query: 450 MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQ-FSAGD 508
+DP +T HILLSN+YA++G+ E RR ++ K PG+S I V+ Q FS+GD
Sbjct: 701 LDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGD 760
Query: 509 KSHPRTSEIYLKLDDMICRLR 529
+S+P E+ + D + RL+
Sbjct: 761 QSNP---EVVSQAQDELNRLK 778
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 145/338 (42%), Gaps = 45/338 (13%)
Query: 37 GKQLHAVATVTGL-LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI 95
+Q+HA+ G ++ + + N ++ +Y C ARK+FD++P H++ V Y AL
Sbjct: 113 ARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP--HRNVVSYNALY 170
Query: 96 R---RCPPLES--LQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
R P S L M + + L D +G ++S ++K G+
Sbjct: 171 SAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGY 230
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
V +V+ +Y G L ES R +FD
Sbjct: 231 SDNVVVQTSVLGMYSSCGDL-------------------------------ESARRIFDC 259
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
+ R+ VAW MIVG + N ++ + M+ G + T VL+ CS+ G +
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS-GVDPTQFTYSIVLNGCSKLGSYSL 318
Query: 271 GRWVHG-FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGL 329
G+ +H V DL + +L+DMY CG + A VF + N+V+WN+++ G
Sbjct: 319 GKLIHARIIVSDSLADLPL--DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 330 AMHGMGKAVVDMFPHMVE--EVKPDAVTFMALLSACSH 365
+ +G G+ + M+ ++ +PD TF A +SA +
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 155/394 (39%), Gaps = 74/394 (18%)
Query: 196 VKWEGVESGRVVFDGMPERNEVAWTVM--IVGYVGNGFTKEAFWLLK----EMVFGCGFE 249
V+ +E R VFD MP+RN V + + YV G + + ++K +M+F
Sbjct: 33 VRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHS-QIIKLGSFQMIFFMPLN 91
Query: 250 LNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDL--GVMVGTSLVDMYAKCGRISIA 307
++ + C + R +H + A +L+ MY +CG + A
Sbjct: 92 EIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQA 151
Query: 308 LVVFKNMSRRNVVAWNAVLGGLAMH-GMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSH 365
VF M RNVV++NA+ + + + HM E VKP++ TF +L+ C+
Sbjct: 152 RKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAV 211
Query: 366 SGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLG 425
LE V L+G + + + + K+ N VV
Sbjct: 212 -------------LEDV---------------LMGSSLNSQ-----IIKLGYSDNVVVQT 238
Query: 426 SLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALS---GKVEKANSFRRVLK 482
S+LG + G L+ A +I D +N + + M S K+E F R +
Sbjct: 239 SVLGMYSSCGDLESARRI------FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 483 KRGIRKVPGMSSIYVDG--QLHQFSAGDKSHPR----TSEIYLKLD----DMICR---LR 529
G+ SI ++G +L +S G H R S L LD DM C +R
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMR 352
Query: 530 LAGYV------PNTTC--QVLFGCSSSGDCTEAL 555
A YV PN ++ GCS +G +A+
Sbjct: 353 EAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAM 386
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 43/462 (9%)
Query: 40 LHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCP 99
LH + G+++ ++ + +++ Y+ C A +L+ Q DS+ I C
Sbjct: 268 LHCLVVKCGMVN--DISVVTSLVCAYSRCGCLVSAERLYASAKQ---DSIVGLTSIVSCY 322
Query: 100 PLE-----SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
+ ++ F + RQL + ID + ++G +H +K G T
Sbjct: 323 AEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKT 382
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
V N ++ +Y KF + VE+ +F+ + E
Sbjct: 383 LVVNGLITMYSKF-------------------------------DDVETVLFLFEQLQET 411
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
++W +I G V +G AF + +M+ G + +T+ S+L+ CSQ + +G+ +
Sbjct: 412 PLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKEL 471
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
HG+ ++ ++ V T+L+DMYAKCG A VFK++ WN+++ G ++ G+
Sbjct: 472 HGYTLRN-NFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Query: 335 GKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYA 393
+ + M E+ +KPD +TF+ +LSAC+H G V++G+ FR + + I P ++HYA
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 590
Query: 394 CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPL 453
MV LLGRA EA L+ KM I+P+ V G+LL +C H +L++ E + R++ +D
Sbjct: 591 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 650
Query: 454 NTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI 495
N ++L+SN+YA + R ++K G G+S I
Sbjct: 651 NGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 100/175 (57%), Gaps = 3/175 (1%)
Query: 189 TVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGF 248
T +L+ +K V S +++FD MPER+ V W +I GY NG+ +A W L ++ GF
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA-WKLFIVMLQQGF 147
Query: 249 ELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIAL 308
+ TL ++L C Q G V GR VHG A K+ G +L V +L+ Y+KC + A
Sbjct: 148 SPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS-GLELDSQVKNALISFYSKCAELGSAE 206
Query: 309 VVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSA 362
V+F+ M ++ V+WN ++G + G+ + + +F +M E+ V+ VT + LLSA
Sbjct: 207 VLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 17/288 (5%)
Query: 55 LFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEM 110
++++ ++L++Y + A+ LFDE+P+ +D+V + ALI R ++ +LFI M
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPE--RDTVVWNALICGYSRNGYECDAWKLFIVM 142
Query: 111 RQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLL 170
Q G S + G + G VH K G ++V NA++ Y K L
Sbjct: 143 LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAEL 202
Query: 171 GEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNG 230
G A +F E++ S VSW ++ + E VF M E+N V I+ +
Sbjct: 203 GSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAH 262
Query: 231 FTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMV 290
+ E L +V CG + + S++ A S+ G + ++ A + +V
Sbjct: 263 VSHEP---LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQ------DSIV 313
Query: 291 G-TSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKA 337
G TS+V YA+ G + IA+V F +R+ + +AV +HG K+
Sbjct: 314 GLTSIVSCYAEKGDMDIAVVYFSK-TRQLCMKIDAVALVGILHGCKKS 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 283 GWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMF 342
G D V V TSL+++Y K G ++ A ++F M R+ V WNA++ G + +G +F
Sbjct: 80 GLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLF 139
Query: 343 PHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQ-YFRDLESVYEIRPEIEHYACMVDLLG 400
M+++ P A T + LL C G V QGR + +S E+ ++++ ++
Sbjct: 140 IVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN--ALISFYS 197
Query: 401 RAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ-----LAEKIVRELVEMDPLN 454
+ L AE+L ++M + V +++G+ Y+ LQ + + + + VE+ P+
Sbjct: 198 KCAELGSAEVLFREMKDKST-VSWNTMIGA-YSQSGLQEEAITVFKNMFEKNVEISPVT 254
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/518 (27%), Positives = 239/518 (46%), Gaps = 80/518 (15%)
Query: 50 LSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI--RRCPPLESLQLF 107
+ S NL LR + +A +HA LFDE+PQ S++ R P ++L LF
Sbjct: 18 VKSTNLVLRCVFIRNFA-----THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF 72
Query: 108 IEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKF 167
+++ + + L P G QVH+ ++K G T A++D+Y K+
Sbjct: 73 LQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKY 132
Query: 168 GLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM-PERNEVA-------- 218
G L ++ +VF +E +VSW +L G ++ + VF M ER E++
Sbjct: 133 GHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVV 192
Query: 219 -----------------------------WTVMIVGYVGNGFTKEAFW------------ 237
T MI Y G EA
Sbjct: 193 KTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEV 252
Query: 238 LLKEMVFGC--------GFEL------NCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMG 283
+L ++ GC F L N L S L+ CS + D+ +G+ +H A++ G
Sbjct: 253 MLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN-G 311
Query: 284 WDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFP 343
+ + L+DMY KCG+I A +F+ + ++VV+W +++ A++G G +++F
Sbjct: 312 FVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFR 371
Query: 344 HMVEE---VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLG 400
M EE V P++VTF+ ++SAC+H+GLV++G++ F ++ Y + P EHY C +D+L
Sbjct: 372 EMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILS 431
Query: 401 RAGHLEEAELLVKKMPIRPNE----VVLGSLLGSCYAHGKLQLAEKIVRELV-EMDPLNT 455
+AG EE LV++M N+ + ++L +C + L E + R L+ E P N
Sbjct: 432 KAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENA 491
Query: 456 EYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMS 493
++L+SN YA GK + R LK +G+ K G S
Sbjct: 492 SIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 201/411 (48%), Gaps = 25/411 (6%)
Query: 225 GYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGW 284
+ +G K+A + + +++ + ++ L + C ++ + + VHG + A
Sbjct: 228 AFCKHGKVKKALYTI-DILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHG-KISASVS 285
Query: 285 DLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPH 344
L + L++MY+ CG + A VF+ MS +N+ W ++ A +G G+ +DMF
Sbjct: 286 HLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSR 345
Query: 345 MVEEVK-PDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAG 403
EE PD F + AC G V++G +F + Y I P IE Y +V++ G
Sbjct: 346 FKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPG 405
Query: 404 HLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSN 463
L+EA V++MP+ PN V +L+ HG L+L + + +DP
Sbjct: 406 FLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGF 465
Query: 464 MYALSGKVEKANSFRRVLKKR-GIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLD 522
+ + VEK + LKKR GI + G+ S + +F AGD + P E++ L
Sbjct: 466 IPVKASDVEKES-----LKKRSGI--LHGVKS-----SMQEFRAGDTNLPENDELFQLLR 513
Query: 523 DMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGS 582
++ + GYV T + D + E E +L HSE++A +++++
Sbjct: 514 NLKMHMVEVGYVAETRMAL-------HDIDQ--ESKETLLLGHSERIAFARAVLNSAPRK 564
Query: 583 PLYIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
P + KNLR+C DCH+A+KI S+I RE++ RD RFH K G+C+C DYW
Sbjct: 565 PFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 185/338 (54%), Gaps = 5/338 (1%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEV 217
N ++D YV + +A +F E+ SW +++ G VE R F+ PE++ V
Sbjct: 316 NTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV 375
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
+W +I Y N KEA L M G + + TL S+LSA + ++ +G +H
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNIE-GEKPDPHTLTSLLSASTGLVNLRLGMQMHQI 434
Query: 278 AVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS-RRNVVAWNAVLGGLAMHGMGK 336
VK + D V V +L+ MY++CG I + +F M +R V+ WNA++GG A HG
Sbjct: 435 VVKTVIPD--VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNAS 492
Query: 337 AVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACM 395
+++F M + P +TF+++L+AC+H+GLV++ + F + SVY+I P++EHY+ +
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSL 552
Query: 396 VDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNT 455
V++ G EEA ++ MP P++ V G+LL +C + + LA + ++P ++
Sbjct: 553 VNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESS 612
Query: 456 EYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMS 493
++LL NMYA G ++A+ R ++ + I+K G S
Sbjct: 613 TPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSS 650
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 48/266 (18%)
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
R N ++ ++ G + EAR +F ++E + V+W ++ G VK + R +FD MP+R
Sbjct: 41 RATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR 100
Query: 215 NEVAWTVMIVGYVGNG---FTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
+ V W MI GYV G F +EA L EM F N
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWN-------------------- 140
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+++ YAK RI AL++F+ M RN V+W+A++ G
Sbjct: 141 ---------------------TMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQ 179
Query: 332 HGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
+G + V +F M VK D+ AL++ + + + S+ R ++ +
Sbjct: 180 NGEVDSAVVLFRKM--PVK-DSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVY 236
Query: 392 -YACMVDLLGRAGHLEEAELLVKKMP 416
Y ++ G+ G +E A L ++P
Sbjct: 237 AYNTLIVGYGQRGQVEAARCLFDQIP 262
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 159/296 (53%), Gaps = 7/296 (2%)
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
VF G + + W+ +I G V N +A L K M E N TL S+L A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE-DVEPNIATLNSLLPAYAALA 434
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAW 322
D+ +H + K G+ + T LV +Y+KCG + A +F + + +VV W
Sbjct: 435 DLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 323 NAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
A++ G MHG G + +F MV V P+ +TF + L+ACSHSGLVE+G FR +
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
Query: 382 VYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAE 441
Y+ HY C+VDLLGRAG L+EA L+ +P P V G+LL +C H +QL E
Sbjct: 554 HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGE 613
Query: 442 KIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV 497
+L E++P NT ++LL+N+YA G+ + R +++ G+RK PG S+I +
Sbjct: 614 MAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 141/315 (44%), Gaps = 38/315 (12%)
Query: 64 VYAACALPSHARKLFDEIPQSHKDSVDYT--ALIRRCPPLESLQLFIEMRQLGLSI--DX 119
YA C ++ARKLF+E+PQS S + +R +++ +FI M G+ D
Sbjct: 58 TYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDG 117
Query: 120 XXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGE 179
L +G VH +++ FG+ V NA++ +Y+ FG + AR VF
Sbjct: 118 YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV 177
Query: 180 IEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLL 239
++ V+SW MI GY NG+ +A +
Sbjct: 178 MKNRDVISW-------------------------------NTMISGYYRNGYMNDALMMF 206
Query: 240 KEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYA 299
MV +L+ T+ S+L C D+ +GR VH + D + V +LV+MY
Sbjct: 207 DWMV-NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGD-KIEVKNALVNMYL 264
Query: 300 KCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMA 358
KCGR+ A VF M RR+V+ W ++ G G + +++ M E V+P+AVT +
Sbjct: 265 KCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIAS 324
Query: 359 LLSACSHSGLVEQGR 373
L+S C + V G+
Sbjct: 325 LVSVCGDALKVNDGK 339
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 175/401 (43%), Gaps = 44/401 (10%)
Query: 56 FLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMR 111
+++NA+L +Y AR +FD + ++D + + +I R ++L +F M
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMK--NRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 112 QLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLG 171
+ +D L D +G VH V + G V NA++++Y+K G +
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 172 EARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGF 231
EAR VF +E V++WT MI GY +G
Sbjct: 271 EARFVFDRMERRDVITWT-------------------------------CMINGYTEDGD 299
Query: 232 TKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVG 291
+ A L + M F G N VT+ S++S C + V G+ +HG+AV+ + +++
Sbjct: 300 VENALELCRLMQFE-GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS-DIIIE 357
Query: 292 TSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVK 350
TSL+ MYAKC R+ + VF S+ + W+A++ G + + + +F M E+V+
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 351 PDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAEL 410
P+ T +LL A + + Q L ++ +V + + G LE A
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 411 L---VKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
+ +++ + V+ G+L+ HG A ++ E+V
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV 517
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 162/299 (54%), Gaps = 7/299 (2%)
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLS 260
+ES VF + + N +W +I N +E F L + + E N +T +LS
Sbjct: 632 IESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL----KLEPNEITFVGLLS 687
Query: 261 ACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV 320
A +Q G G H ++ G+ V +LVDMY+ CG + + VF+N ++
Sbjct: 688 ASTQLGSTSYGMQAHCHLIRR-GFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSIS 746
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHMVE--EVKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
AWN+V+ HGMG+ +++F + E++P+ +F++LLSACSHSG +++G Y++
Sbjct: 747 AWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQ 806
Query: 379 LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQ 438
+E + ++P EH +VD+LGRAG L EA + + V G+LL +C HG +
Sbjct: 807 MEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTK 866
Query: 439 LAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV 497
L +++ L EM+P N Y+I L+N Y G E+A R++++ ++K+PG S I V
Sbjct: 867 LGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 198/468 (42%), Gaps = 75/468 (16%)
Query: 40 LHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRC- 98
LH +A TGL+ +L NA++++YA S A +F + H+D V + ++ +C
Sbjct: 210 LHCLAIETGLVGDSSLC--NALMNLYAKGENLSSAECVFTHME--HRDIVSWNTIMTKCL 265
Query: 99 ---PPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTR 155
P +SLQ F M G D + + +G +H V+K G+
Sbjct: 266 ANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAH 325
Query: 156 VC--NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
V N+++ +Y K G A VF E+ V+S +L+
Sbjct: 326 VSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILN-------------------- 365
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
G+ NG +EAF +L +M + + T+ S+ S C GR
Sbjct: 366 -----------GFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRA 414
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
VHG+ V+ + V S++DMY KCG + A ++FK + R++V+WN+++ + +G
Sbjct: 415 VHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Query: 334 MGKAVVDMFPHMVEEV---KPDAVTFMALLSACSHSGLVEQGRQY-------------FR 377
++F +V E K T +A+L++C S + G+ F
Sbjct: 475 FTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL 534
Query: 378 DLESVYEIRPEIEHYACMVDLLGRAGH----LEEAELLVKKMPIRPNEVVLGSLLGSCYA 433
LE++ E R ++ + ++ +GH L + + ++ IR + L +LLG+ A
Sbjct: 535 RLETMSETR-DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHD---LITLLGTISA 590
Query: 434 HGKLQLAEK-------IVRELVEMDPLNTEYHILLSNMYALSGKVEKA 474
G L L + ++ L E+D T+ L MY +E A
Sbjct: 591 SGNLGLVLQGRCFHGLAIKSLRELD---TQLQNTLITMYGRCKDIESA 635
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 112/518 (21%), Positives = 217/518 (41%), Gaps = 74/518 (14%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+ LH + +G ++ + N+I+ +Y+ C A +F+E+ +D + A++
Sbjct: 308 GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVC--RDVISSNAILN 365
Query: 97 RCPP----LESLQLFIEMRQLG-LSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF- 150
E+ + +M+ + + D L G VH V+
Sbjct: 366 GFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQ 425
Query: 151 GKCTRVCNAVMDLYVKFGLLGEA-------------------------------RKVFGE 179
+ V N+V+D+Y K GL +A + +F E
Sbjct: 426 SRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKE 485
Query: 180 IEVP---SVVSWTVVL---------DGVV----------KWEGVESGRVVFDGMPE-RNE 216
+ S S + VL D ++ K + S + + M E R+
Sbjct: 486 VVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDL 545
Query: 217 VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHG 276
+W +I G +G E+ + M + +TL +SA G V GR HG
Sbjct: 546 TSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHG 605
Query: 277 FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGK 336
A+K++ +L + +L+ MY +C I A+ VF +S N+ +WN V+ L+ + G+
Sbjct: 606 LAIKSLR-ELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 664
Query: 337 AVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQ-YFRDLESVYEIRPEIEHYACM 395
V +F ++ +++P+ +TF+ LLSA + G G Q + + ++ P + A +
Sbjct: 665 EVFQLFRNL--KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AAL 720
Query: 396 VDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL---VEMDP 452
VD+ G LE + + + S++ + HG + A ++ +EL EM+P
Sbjct: 721 VDMYSSCGMLETGMKVFRNSGVNSIS-AWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 453 LNTEYHILLSNMYALSGKVEKANSFRRVLKKR-GIRKV 489
+ + LLS + SG +++ S+ + ++++ G++ V
Sbjct: 780 NKSSFISLLSAC-SHSGFIDEGLSYYKQMEEKFGVKPV 816
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 130/330 (39%), Gaps = 54/330 (16%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVD--YTAL 94
G+ H +A + L + L+N ++ +Y C A K+F I + S + +AL
Sbjct: 600 GRCFHGLAIKS--LRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISAL 657
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
+ E QLF R L L + +LG + G Q H +++ GF
Sbjct: 658 SQNKAGREVFQLF---RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANP 714
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
V A++D+Y G+L KVF V S+ +W + V+ G F GM E+
Sbjct: 715 FVSAALVDMYSSCGMLETGMKVFRNSGVNSISAW----NSVISAHG-------FHGMGEK 763
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
A L KE+ E N + S+LSACS SG + G
Sbjct: 764 --------------------AMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSY 803
Query: 275 HGFAVKAMGWDLGVMVGTS----LVDMYAKCGRISIALVVFKNMSR-RNVVAWNAVLGGL 329
+ K M GV T +VDM + G++ A + + W A+L
Sbjct: 804 Y----KQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSAC 859
Query: 330 AMHG---MGKAVVDMFPHMVEEVKPDAVTF 356
HG +GK V ++ E++PD ++
Sbjct: 860 NYHGDTKLGKEVAEVLF----EMEPDNASY 885
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 117/263 (44%), Gaps = 7/263 (2%)
Query: 203 SGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVF-GCGFELNCVTLCSVLSA 261
S +FD + E++ + W MI NG A L EM+ G F+ + L + +
Sbjct: 140 SSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALS 199
Query: 262 CSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA 321
C +H A++ G + +L+++YAK +S A VF +M R++V+
Sbjct: 200 SLHLSRKC--SMLHCLAIET-GLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVS 256
Query: 322 WNAVLGGLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQ-YFRDL 379
WN ++ +G + + F M + D VTF ++SACS + G + +
Sbjct: 257 WNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVI 316
Query: 380 ESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQL 439
+S Y + ++ + + G E AE + +++ R + + ++L A+G +
Sbjct: 317 KSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCR-DVISSNAILNGFAANGMFEE 375
Query: 440 AEKIVRELVEMDPLNTEYHILLS 462
A I+ ++ +D + + ++S
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVS 398
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 220/470 (46%), Gaps = 46/470 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQLH++ +G + N+F+ N ++ Y+AC S + + F+ +P+ KD + + +++
Sbjct: 232 GKQLHSLVVKSGW-NISNIFVANVLVDYYSACGDLSGSMRSFNAVPE--KDVISWNSIVS 288
Query: 97 RCPP----LESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
C L+SL LF +M+ G R D G Q+H V+K GF
Sbjct: 289 VCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF-- 346
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+V S+ + ++D K G+E+ +++ +P
Sbjct: 347 ----------------------------DVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACS----QSGDV 268
N ++ + G TK+ + M+ G ++ VTL +VL A S +S
Sbjct: 379 CLNLECCNSLMTSLMHCGITKDIIEMFGLMIDE-GTGIDEVTLSTVLKALSLSLPESLHS 437
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGG 328
C VH A+K+ G+ V V SL+D Y K G+ ++ VF + N+ +++ G
Sbjct: 438 CT--LVHCCAIKS-GYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIING 494
Query: 329 LAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRP 387
A +GMG V M M + PD VT +++LS CSHSGLVE+G F LES Y I P
Sbjct: 495 YARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISP 554
Query: 388 EIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+ YACMVDLLGRAG +E+AE L+ + + V SLL SC H + + L
Sbjct: 555 GRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVL 614
Query: 448 VEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYV 497
+ ++P N +I +S Y G E + R + R + + G SS+ V
Sbjct: 615 MNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVV 664
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 152/350 (43%), Gaps = 43/350 (12%)
Query: 74 ARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXX 129
A + FDE+ S +D V Y LI R L +++L+ EM GL
Sbjct: 65 AHEAFDEM--SVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVC 122
Query: 130 XRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWT 189
G QVH V+ GFG V +A++ LY L+ A K+F
Sbjct: 123 SDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLF------------ 170
Query: 190 VVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFE 249
D M +RN +++ + G +K F + M G
Sbjct: 171 -------------------DEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELE-GVA 210
Query: 250 LNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDL-GVMVGTSLVDMYAKCGRISIAL 308
N +T C ++ CS V G+ +H VK+ GW++ + V LVD Y+ CG +S ++
Sbjct: 211 KNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKS-GWNISNIFVANVLVDYYSACGDLSGSM 269
Query: 309 VVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSG 367
F + ++V++WN+++ A +G +D+F M +P FM+ L+ CS +
Sbjct: 270 RSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNS 329
Query: 368 LVEQGRQ-YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP 416
++ G+Q + L+ +++ + + ++D+ G+ +E + LL + +P
Sbjct: 330 DIQSGKQIHCYVLKMGFDV-SSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 20/274 (7%)
Query: 181 EVPSVVSWT--VVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWL 238
E PS + +T +D ++K + S FD M R+ V + ++I G G + A L
Sbjct: 40 ENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIEL 99
Query: 239 LKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMY 298
EMV CG + T SVLS CS G VH V ++G+ + V ++LV +Y
Sbjct: 100 YAEMV-SCGLRESASTFPSVLSVCSDELFCREGIQVHC-RVISLGFGCNMFVRSALVGLY 157
Query: 299 AKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFM 357
A + +AL +F M RN+ N +L G K + +++ M +E V + +T+
Sbjct: 158 ACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYC 217
Query: 358 ALLSACSHSGLVEQGRQYFR-------DLESVYEIRPEIEHYACMVDLLGRAGHLEEAEL 410
++ CSH LV +G+Q ++ +++ +++Y+ DL +G +
Sbjct: 218 YMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL---SGSMRSFNA 274
Query: 411 LVKKMPIRPNEVV-----LGSLLGSCYAHGKLQL 439
+ +K I N +V GS+L S K+Q
Sbjct: 275 VPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQF 308
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 235/488 (48%), Gaps = 45/488 (9%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPLESL----QLFIE 109
NL++ NA++ +Y AR+LFD + S +D+V + A+I E L +L
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRM--SERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGD-----------PNVGPQVHSGVVKFGFGKCTRVCN 158
M G+ G+ N ++ S + G C+ +
Sbjct: 276 MYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 159 AVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGV--------VKWEGVESGRVVFDG 210
+K+G KVF + + S S++ +D V + + +VF
Sbjct: 336 ------LKWG------KVFHCLVIRSC-SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQ 382
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
+ + W +I G+ N ++E +LLKEM+ GF N +TL S+L ++ G++
Sbjct: 383 VEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQH 441
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
G+ H + ++ + +++ SLVDMYAK G I A VF +M +R+ V + +++ G
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 331 MHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI 389
G G+ + F M +KPD VT +A+LSACSHS LV +G F +E V+ IR +
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRE-LV 448
EHY+CMVDL RAG+L++A + +P P+ + +LL +C HG + E + L+
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLL 621
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
E P + +++LL++MYA++G K + + +L G++K + + D +L G+
Sbjct: 622 ETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GE 677
Query: 509 KSHPRTSE 516
+ P +
Sbjct: 678 NNKPMNDD 685
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 204/491 (41%), Gaps = 63/491 (12%)
Query: 36 PGKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFD--EIPQSHKDSVDYTA 93
PG+QLHA +GL L + ++ Y+A L A+ + + EI +V +
Sbjct: 101 PGQQLHAHCISSGLEFDSVLVPK--LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGS 158
Query: 94 LIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
IR ES+ ++ M G+ D L D G VH G ++ +C
Sbjct: 159 YIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH-GSIEVSSHRC 217
Query: 154 T-RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM- 211
VCNA++ +Y +FG + AR++F + VSW +++ E + + D M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 212 ---PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDV 268
E + V W + G + G A + M C + V + + L ACS G +
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR-NCNVRIGSVAMINGLKACSHIGAL 336
Query: 269 CVGRWVHGFAVKAMGWDLGV-MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLG 327
G+ H +++ + + V SL+ MY++C + A +VF+ + ++ WN+++
Sbjct: 337 KWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIIS 396
Query: 328 GLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQG---------RQYFR 377
G A + + + M + P+ +T ++L + G ++ G RQ ++
Sbjct: 397 GFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYK 456
Query: 378 D-------LESVYEIRPEI---------------EHYACMVDLLGRAGHLEEAELLVKKM 415
D L +Y EI Y ++D GR G E A K M
Sbjct: 457 DCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM 516
Query: 416 P---IRPNEVVLGSLLGSCYAHGKLQLAEKIVRE----LVEMD-----PLNTEYHILLSN 463
I+P+ V + ++L +C +H L VRE +M+ L E++ + +
Sbjct: 517 DRSGIKPDHVTMVAVLSAC-SHSNL------VREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 464 MYALSGKVEKA 474
+Y +G ++KA
Sbjct: 570 LYCRAGYLDKA 580
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 235/488 (48%), Gaps = 45/488 (9%)
Query: 54 NLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCPPLESL----QLFIE 109
NL++ NA++ +Y AR+LFD + S +D+V + A+I E L +L
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRM--SERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 110 MRQLGLSIDXXXXXXXXXXXXRLGD-----------PNVGPQVHSGVVKFGFGKCTRVCN 158
M G+ G+ N ++ S + G C+ +
Sbjct: 276 MYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 159 AVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGV--------VKWEGVESGRVVFDG 210
+K+G KVF + + S S++ +D V + + +VF
Sbjct: 336 ------LKWG------KVFHCLVIRSC-SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQ 382
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
+ + W +I G+ N ++E +LLKEM+ GF N +TL S+L ++ G++
Sbjct: 383 VEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQH 441
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
G+ H + ++ + +++ SLVDMYAK G I A VF +M +R+ V + +++ G
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 331 MHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI 389
G G+ + F M +KPD VT +A+LSACSHS LV +G F +E V+ IR +
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRE-LV 448
EHY+CMVDL RAG+L++A + +P P+ + +LL +C HG + E + L+
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLL 621
Query: 449 EMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGD 508
E P + +++LL++MYA++G K + + +L G++K + + D +L G+
Sbjct: 622 ETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GE 677
Query: 509 KSHPRTSE 516
+ P +
Sbjct: 678 NNKPMNDD 685
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 204/491 (41%), Gaps = 63/491 (12%)
Query: 36 PGKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFD--EIPQSHKDSVDYTA 93
PG+QLHA +GL L + ++ Y+A L A+ + + EI +V +
Sbjct: 101 PGQQLHAHCISSGLEFDSVLVPK--LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGS 158
Query: 94 LIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
IR ES+ ++ M G+ D L D G VH G ++ +C
Sbjct: 159 YIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH-GSIEVSSHRC 217
Query: 154 T-RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM- 211
VCNA++ +Y +FG + AR++F + VSW +++ E + + D M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 212 ---PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDV 268
E + V W + G + G A + M C + V + + L ACS G +
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR-NCNVRIGSVAMINGLKACSHIGAL 336
Query: 269 CVGRWVHGFAVKAMGWDLGV-MVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLG 327
G+ H +++ + + V SL+ MY++C + A +VF+ + ++ WN+++
Sbjct: 337 KWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIIS 396
Query: 328 GLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQG---------RQYFR 377
G A + + + M + P+ +T ++L + G ++ G RQ ++
Sbjct: 397 GFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYK 456
Query: 378 D-------LESVYEIRPEI---------------EHYACMVDLLGRAGHLEEAELLVKKM 415
D L +Y EI Y ++D GR G E A K M
Sbjct: 457 DCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM 516
Query: 416 P---IRPNEVVLGSLLGSCYAHGKLQLAEKIVRE----LVEMD-----PLNTEYHILLSN 463
I+P+ V + ++L +C +H L VRE +M+ L E++ + +
Sbjct: 517 DRSGIKPDHVTMVAVLSAC-SHSNL------VREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 464 MYALSGKVEKA 474
+Y +G ++KA
Sbjct: 570 LYCRAGYLDKA 580
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 237/499 (47%), Gaps = 47/499 (9%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI-- 95
+QLH T G +S N L N+++ Y A K+FDE+P D + + +L+
Sbjct: 75 RQLHGYVTKHGFVS--NTRLSNSLMRFYKTSDSLEDAHKVFDEMPD--PDVISWNSLVSG 130
Query: 96 --RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
+ E + LF+E+ + + + RL +G +HS +VK G K
Sbjct: 131 YVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKG 190
Query: 154 TRVC-NAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVV--------------------- 191
V N ++D+Y K G + +A VF +E VSW +
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Query: 192 ----------LDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKE 241
+D VK + V MP N +W ++ GYV + + EA +
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 242 MVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKC 301
M G + +L VL+A + V G +H A K +G D V+V ++L+DMY+KC
Sbjct: 311 M-HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHK-LGLDSRVVVASALIDMYSKC 368
Query: 302 GRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE--VKPDAVTFMAL 359
G + A ++F M R+N++ WN ++ G A +G + +F + +E +KPD TF+ L
Sbjct: 369 GMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNL 428
Query: 360 LSACSHSGL-VEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
L+ CSH + +E YF + + Y I+P +EH ++ +G+ G + +A+ ++++
Sbjct: 429 LAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFG 488
Query: 419 PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM-DPLNTEY-HILLSNMYALSGKVEKANS 476
+ V +LLG+C A L+ A+ + +++E+ D EY +I++SN+YA + +
Sbjct: 489 YDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQ 548
Query: 477 FRRVLKKRGIRKVPGMSSI 495
R+++++ G+ K G S I
Sbjct: 549 IRKIMRESGVLKEVGSSWI 567
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 218/461 (47%), Gaps = 45/461 (9%)
Query: 40 LHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCP 99
+H +A V+GL + +AI+ Y+ L A KLF IP + L C
Sbjct: 128 IHGIAIVSGL--GFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCC 185
Query: 100 PL--ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPN---VGPQVHSGVVKFGFGKCT 154
+ + LF M+ G + L DP+ V VH+ +K +
Sbjct: 186 GFWDKGINLFNLMQHRGHQPNCYTMVALTSG---LIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
V A++++Y + + A VF I P +V
Sbjct: 243 YVGCALVNMYSRCMCIASACSVFNSISEPDLV---------------------------- 274
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
A + +I GY G KEA L E+ G + +CV + VL +C++ D G+ V
Sbjct: 275 ---ACSSLITGYSRCGNHKEALHLFAELRMS-GKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
H + ++ +G +L + V ++L+DMY+KCG + A+ +F + +N+V++N+++ GL +HG
Sbjct: 331 HSYVIR-LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGF 389
Query: 335 GKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYA 393
+ F ++E + PD +TF ALL C HSGL+ +G++ F ++S + I P+ EHY
Sbjct: 390 ASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYV 449
Query: 394 CMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM-DP 452
MV L+G AG LEEA V + + +LG+LL C H LAE + + + +
Sbjct: 450 YMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEE 509
Query: 453 LNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMS 493
+ Y ++LSN+YA G+ ++ R + + K+PG+S
Sbjct: 510 RRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 186/395 (47%), Gaps = 41/395 (10%)
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
G+ ++ L + C + + + VH F ++G + S+++MY+ CG +
Sbjct: 176 GYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGIS-DISAYNSIIEMYSGCGSVED 234
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSH 365
AL VF +M RN+ W V+ A +G G+ +D F +E KPD F + AC
Sbjct: 235 ALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGV 294
Query: 366 SGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLG 425
G + +G +F + Y I P +EHY +V +L G+L+EA V+ M PN +
Sbjct: 295 LGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWE 352
Query: 426 SLLGSCYAHGKLQLAEKIVRELVEMDP--LNTEYHILLSNMYALSGKVEKANSFRRVLKK 483
+L+ HG L L ++ + ++D LN E L V+ ++ + L++
Sbjct: 353 TLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLV-------PVKSSDLVKEKLQR 405
Query: 484 RGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLF 543
+ K P Y+ +AGD S P E+Y+ L + + GYVP +
Sbjct: 406 --MAKGPNYGIRYM-------AAGDISRPENRELYMALKSLKEHMIEIGYVPLSKL---- 452
Query: 544 GCSSSGDCTEALEEVEQV-----LFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHS 598
AL +V+Q LF H+E+ A + T + S + + KNLR+C DCH+
Sbjct: 453 ----------ALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHN 502
Query: 599 AIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
A+K+ S I RE++ RD RFH K G CSC +YW
Sbjct: 503 ALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 207/460 (45%), Gaps = 50/460 (10%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRR 97
+QLH G S N+ L +I+ VY C + S AR++FDEI + V + ++RR
Sbjct: 182 RQLHCAVVKYGY--SGNVDLETSIVDVYGKCRVMSDARRVFDEI--VNPSDVSWNVIVRR 237
Query: 98 CPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
+ E++ +F +M +L + R VG +H+ VK
Sbjct: 238 YLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVAD 297
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
T V +V D+YVK L AR+VF + + SWT + G R +FD MPE
Sbjct: 298 TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
RN V+W M+ GYV EA L M ++ VTL +L+ CS DV +G+
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE-NIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSR-RNVVAWNAVLGGLAMH 332
HGF + G+D V+V +L+DMY KCG + A + F+ MS R+ V+WNA+L G+A
Sbjct: 417 AHGFIYRH-GYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARV 475
Query: 333 GMGKAVVDMFPHMVEEVKPDAVTFMALLSACS-----------HSGLVEQG-------RQ 374
G + + F M E KP T LL+ C+ H L+ G R
Sbjct: 476 GRSEQALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRG 535
Query: 375 YFRDLES---VYEIRPEIEHYACMVDLL------------GRAGHLEEAELLVKKMPIRP 419
D+ S ++ E+ A DL+ GR+ + E +L++ ++P
Sbjct: 536 AMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKP 595
Query: 420 NEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHI 459
+ V +L +C G ++L + ++T+YHI
Sbjct: 596 DHVTFLGILQACIREGHVELGFQY------FSSMSTKYHI 629
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 179/373 (47%), Gaps = 42/373 (11%)
Query: 65 YAACALPSHARKLFDEIPQSHKDSVDYTAL----IRRCPPLESLQLFIEMRQLGLSIDXX 120
YA L AR+LFD +P+ ++ V + A+ + E+L MRQ +ID
Sbjct: 339 YAMSGLTREARELFDLMPE--RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNV 396
Query: 121 XXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEI 180
+ D +G Q H + + G+ V NA++D+Y K G L
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTL---------- 446
Query: 181 EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE-RNEVAWTVMIVGYVGNGFTKEAFWLL 239
+S + F M E R+EV+W ++ G G +++A
Sbjct: 447 ---------------------QSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF 485
Query: 240 KEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYA 299
+ M + + TL ++L+ C+ + +G+ +HGF ++ G+ + V++ ++VDMY+
Sbjct: 486 EGMQVEA--KPSKYTLATLLAGCANIPALNLGKAIHGFLIRD-GYKIDVVIRGAMVDMYS 542
Query: 300 KCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMA 358
KC A+ VFK + R+++ WN+++ G +G K V ++F + E VKPD VTF+
Sbjct: 543 KCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLG 602
Query: 359 LLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
+L AC G VE G QYF + + Y I P++EHY CM++L + G L + E + MP
Sbjct: 603 ILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFD 662
Query: 419 PNEVVLGSLLGSC 431
P +L + +C
Sbjct: 663 PPMQMLTRINDAC 675
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 182/429 (42%), Gaps = 82/429 (19%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIRRCP----PLESLQLFI 108
P +FL N + Y C AR+LF+E+P+ +D + A+I C E ++F
Sbjct: 94 PPIFLLNRAIEAYGKCGCVDDARELFEEMPE--RDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 109 EMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFG 168
M + G+ + D + Q+H VVK+G+ + +++D+Y K
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 169 LLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVG 228
++ +AR+VF EI PS VSW V+ + Y+
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVI-------------------------------VRRYLE 240
Query: 229 NGFTKEAFWLLKEMVFGCGFELNCV----TLCSVLSACSQSGDVCVGRWVHGFAVKAMGW 284
GF EA + +M+ ELN T+ SV+ ACS+S + VG+ +H AVK +
Sbjct: 241 MGFNDEAVVMFFKML-----ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVK-LSV 294
Query: 285 DLGVMVGTSLVDMYAKCGRISIALVVFKN------------------------------- 313
+V TS+ DMY KC R+ A VF
Sbjct: 295 VADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDL 354
Query: 314 MSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKP-DAVTFMALLSACSHSGLVEQG 372
M RN+V+WNA+LGG +D M +E++ D VT + +L+ CS V+ G
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG 414
Query: 373 RQYFRDL-ESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSC 431
+Q + Y+ + + ++D+ G+ G L+ A + ++M +EV +LL
Sbjct: 415 KQAHGFIYRHGYDTNVIVAN--ALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGV 472
Query: 432 YAHGKLQLA 440
G+ + A
Sbjct: 473 ARVGRSEQA 481
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 7/211 (3%)
Query: 168 GLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEG----VESGRVVFDGMPERNEVAWTVMI 223
L+ +ARKV + S + +L+ ++ G V+ R +F+ MPER+ +W +I
Sbjct: 75 ALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVI 134
Query: 224 VGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMG 283
NG + E F + + M G + VL +C D+ + R +H VK G
Sbjct: 135 TACAQNGVSDEVFRMFRRMNRD-GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVK-YG 192
Query: 284 WDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFP 343
+ V + TS+VD+Y KC +S A VF + + V+WN ++ G V MF
Sbjct: 193 YSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFF 252
Query: 344 HMVE-EVKPDAVTFMALLSACSHSGLVEQGR 373
M+E V+P T +++ ACS S +E G+
Sbjct: 253 KMLELNVRPLNHTVSSVMLACSRSLALEVGK 283
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 195/402 (48%), Gaps = 19/402 (4%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+Q+H + G + L NA++ YA C +R FD I K+ V + AL+
Sbjct: 335 GRQIHGMLIKNG--CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRD--KNIVCWNALLS 390
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ P+ L LF++M Q+G Q+HS +V+ G+
Sbjct: 391 GYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYED 445
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGV--ESGRVVFDG 210
V +++M Y K L+ +A + P+ V ++ G+ G ES +++
Sbjct: 446 NDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLI-ST 504
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
+ + + V+W + I + + +E L K M+ + T S+LS CS+ D+ +
Sbjct: 505 LEQPDTVSWNIAIAACSRSDYHEEVIELFKHML-QSNIRPDKYTFVSILSLCSKLCDLTL 563
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
G +HG K V L+DMY KCG I + VF+ +N++ W A++ L
Sbjct: 564 GSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLG 623
Query: 331 MHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI 389
+HG G+ ++ F + KPD V+F+++L+AC H G+V++G F+ ++ Y + PE+
Sbjct: 624 IHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEM 682
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSC 431
+HY C VDLL R G+L+EAE L+++MP + V + L C
Sbjct: 683 DHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 176/429 (41%), Gaps = 59/429 (13%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDY--TAL 94
G QLH ++ GL + + F+ +L +Y L A ++F+++P ++ ++ + L
Sbjct: 132 GTQLHGLSLKYGLFMA-DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLL 190
Query: 95 IRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCT 154
R E + F E+ ++G S+ + D ++ Q+H K G
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
V N+++ Y K G A ++F + +VSW ++ K E +F MPE
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
GF N T SVL S + GR +
Sbjct: 311 --------------------------------GFSPNQGTYVSVLGVSSLVQLLSCGRQI 338
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGM 334
HG +K G + G+++G +L+D YAKCG + + + F + +N+V WNA+L G A +
Sbjct: 339 HGMLIKN-GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKD 396
Query: 335 GKAVVDMFPHMVEE-VKPDAVTFMALLSACS-------HSGLVEQGRQYFRDLESVYEIR 386
G + +F M++ +P TF L +C HS +V G + ++ Y +
Sbjct: 397 GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYE-----DNDYVLS 451
Query: 387 PEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYA-HGKLQLAEKIVR 445
+ YA L LL+ P VV +++ Y+ G+ + K++
Sbjct: 452 SLMRSYA--------KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIS 503
Query: 446 ELVEMDPLN 454
L + D ++
Sbjct: 504 TLEQPDTVS 512
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 179/426 (42%), Gaps = 46/426 (10%)
Query: 38 KQLHAVA-TVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
K LHA++ T+ +L P +++ N I+ +Y S A K+FD++P+ +K V + +I+
Sbjct: 32 KALHALSITLCSVLLQP-VYVCNNIISLYEKLGEVSLAGKVFDQMPERNK--VSFNTIIK 88
Query: 97 RCPPLESLQ----LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
+ +F EMR G + D G Q+H +K+G
Sbjct: 89 GYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAGTQLHGLSLKYGL-- 144
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ D +V LL ++G +++ +E VF+ MP
Sbjct: 145 ------FMADAFVGTCLLC----LYGRLDL------------------LEMAEQVFEDMP 176
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
++ W M+ GF KE + +E+V G L + VL S D+ + +
Sbjct: 177 FKSLETWNHMMSLLGHRGFLKECMFFFRELV-RMGASLTESSFLGVLKGVSCVKDLDISK 235
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H A K G D + V SL+ Y KCG +A +F++ ++V+WNA++ A
Sbjct: 236 QLHCSATKK-GLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
+ +F M E P+ T++++L S L+ GRQ + I
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQ-IHGMLIKNGCETGIVL 353
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
++D + G+LE++ L IR +V + L S YA+ + + ++++M
Sbjct: 354 GNALIDFYAKCGNLEDSRLCFDY--IRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMG 411
Query: 452 PLNTEY 457
TEY
Sbjct: 412 FRPTEY 417
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Query: 257 SVLSACSQSGDVCVGRWVHGFAVKAMGWDLG-VMVGTSLVDMYAKCGRISIALVVFKNMS 315
S+L+ C ++ + +H ++ L V V +++ +Y K G +S+A VF M
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQ 374
RN V++N ++ G + +G +F M P+ T LLS S V G Q
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAGTQ 134
Query: 375 YFRDLESVYEI-RPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVV--LGSLLGSC 431
L Y + + C++ L GR LE AE + + MP + E + SLLG
Sbjct: 135 -LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH- 192
Query: 432 YAHGKLQLAEKIVRELVEMDPLNTEYHIL 460
G L+ RELV M TE L
Sbjct: 193 --RGFLKECMFFFRELVRMGASLTESSFL 219
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 222/476 (46%), Gaps = 43/476 (9%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+Q+H A +G+ S NL + N+++ +Y + +A +F + +D V + LI
Sbjct: 152 GEQIHGNAICSGV-SRYNLVVWNSVMDMYRRLGVFDYALSVF--LTMEDRDVVSWNCLIL 208
Query: 97 RCPPLE----SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
C +L F MR++ + D L + + G Q + +K GF
Sbjct: 209 SCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLS 268
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ V A +D++ K L ++ K+F E+E KW+ V
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELE---------------KWDSVLCNS------- 306
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
MI Y + ++A L + + T SVLS+ + + G
Sbjct: 307 ---------MIGSYSWHCCGEDALRLFI-LAMTQSVRPDKFTFSSVLSSMNAVM-LDHGA 355
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
VH +K +G+DL V TSL++MY K G + +A+ VF ++++ WN V+ GLA +
Sbjct: 356 DVHSLVIK-LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARN 414
Query: 333 GMGKAVVDMFPHMV--EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+ +F ++ + +KPD VT M +L AC ++G V +G Q F +E + + P E
Sbjct: 415 SRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNE 474
Query: 391 HYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM 450
HYAC+++LL R G + EA+ + K+P P+ + +L + G +LAE + + ++E
Sbjct: 475 HYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLES 534
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSA 506
+P ++ +++L +Y ++ + E + R + + ++ G S I ++ + F A
Sbjct: 535 EPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 162/344 (47%), Gaps = 25/344 (7%)
Query: 135 PNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDG 194
P + VH+ +++ GF + T N + LY K G + A ++F +I + ++W V L G
Sbjct: 20 PTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKG 79
Query: 195 VVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAF--------WLLKEMVFGC 246
+ K + + +FD MPER+ V+W MI G V GF + W ++ F
Sbjct: 80 LFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEF-- 137
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
++ + L C + G+ +HG A+ + ++V S++DMY + G
Sbjct: 138 -----TFSILASLVTCVRHGEQ-----IHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDY 187
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSH 365
AL VF M R+VV+WN ++ + G + +D F M E E++PD T ++S CS
Sbjct: 188 ALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSD 247
Query: 366 SGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLG 425
+ +G+Q + + I A +D+ + L+++ L +++ + + V+
Sbjct: 248 LRELSKGKQALALCIKMGFLSNSIVLGAG-IDMFSKCNRLDDSVKLFRELE-KWDSVLCN 305
Query: 426 SLLGSCYAH--GKLQLAEKIVRELVEMDPLNTEYHILLSNMYAL 467
S++GS H G+ L I+ + P + +LS+M A+
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV 349
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 166/341 (48%), Gaps = 39/341 (11%)
Query: 294 LVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPD 352
++ M+ +C I+ A VF +M +++ +W+ ++ + +GMG + +F M + +KP+
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 353 AVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLV 412
TF+ + AC+ G +E+ +F +++ + I P+ EHY ++ +LG+ GHL EAE +
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYI 396
Query: 413 KKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVE 472
+ +P P ++ HG + L + + +V++DP + + + +
Sbjct: 397 RDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETN 456
Query: 473 KANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAG 532
S R+L+ R + + Y D + +M + +
Sbjct: 457 MVTSKSRILEFRNL-------TFYKD---------------------EAKEMAAKKGVV- 487
Query: 533 YVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRI 592
YVP+T VL E EQ L HSE+LA+ +G+I T L I KNLR+
Sbjct: 488 YVPDTRF-VLHDIDQ--------EAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRV 538
Query: 593 CQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
C DCH+ IKI S I R ++VRD RFH FK G CSC DYW
Sbjct: 539 CGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 173/344 (50%), Gaps = 25/344 (7%)
Query: 293 SLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKP 351
++++MY+ C AL VF M +RN W ++ LA +G G+ +DMF +EE KP
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 352 DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELL 411
D F A+ AC G + +G +F + Y + +E Y ++++L GHL+EA
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 412 VKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP--LNTEYHILLSNMYALSG 469
V++M + P+ + +L+ C+ G L+L ++ + ++D ++ E + L A
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDS 327
Query: 470 KVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLR 529
+EK R + IR P ++H+F AGD SH T + L + +
Sbjct: 328 AMEKLKELRYC---QMIRDDPK-------KRMHEFRAGDTSHLGTVSAFRSLKVQMLDI- 376
Query: 530 LAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKN 589
G+VP T +V F E E+ EQ+LF S KLA +I++ + PL + +N
Sbjct: 377 --GFVPAT--RVCFVT------VEEEEKEEQLLF-RSNKLAFAHAIINSEARRPLTVLQN 425
Query: 590 LRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
+R C D H+ K+ S I R ++ RD+ ++H +K G CSC DYW
Sbjct: 426 MRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 182/388 (46%), Gaps = 27/388 (6%)
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
G+ ++ + L + C + + R VH + A+ V ++++MY+ C +
Sbjct: 114 GYAMDLIRLLGLAKLCGKPEALEAARVVHE-CIIALVSPCDVGARNAIIEMYSGCCSVDD 172
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSH 365
AL VF+ M N ++ +G G+ +D+F EE KP+ F + S C+
Sbjct: 173 ALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTL 232
Query: 366 SGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLG 425
+G V++G F+ + Y I P +EHY + +L +GHL+EA V++MP+ P+ V
Sbjct: 233 TGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWE 292
Query: 426 SLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRG 485
+L+ HG ++L ++ + ++D L + + KA+ F V K+
Sbjct: 293 TLMNLSRVHGDVELGDRCAELVEKLDATR------LDKVSSAGLVATKASDF--VKKEPS 344
Query: 486 IRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGC 545
R P S F D SHP+ + IY L + +L+ GYVP+T
Sbjct: 345 TRSEPYFYST--------FRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDT-------- 388
Query: 546 SSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPLYIFKNLRICQDCHSAIKIASN 605
A+E EQ+ F + E++A+ L+ + S + + N+RI DCH +K+ S
Sbjct: 389 RYYRSLIMAMENKEQI-FGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSV 447
Query: 606 IYKREIVVRDRYRFHSFKQGSCSCSDYW 633
I R+++ RD +H FK G C C++ W
Sbjct: 448 ITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 171/379 (45%), Gaps = 79/379 (20%)
Query: 145 VVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIE----------------------- 181
V K GF K V N +MD+YVK + ARKVF +I
Sbjct: 127 VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEA 186
Query: 182 ------VP--SVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTK 233
+P VVSWTV++ G K + +E+ R FD MPE++ V+W M+ GY NGFT+
Sbjct: 187 CKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTE 246
Query: 234 EAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTS 293
+A L +M+ G N T V+SACS D + R + + L V T+
Sbjct: 247 DALRLFNDML-RLGVRPNETTWVIVISACSFRADPSLTRSLVKL-IDEKRVRLNCFVKTA 304
Query: 294 LVDMYAKC--------------------------------GRISIALVVFKNMSRRNVVA 321
L+DM+AKC G +S A +F M +RNVV+
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVS 364
Query: 322 WNAVLGGLAMHGMGKAVVDMFPHMVE--EVKPDAVTFMALLSACSHSGLVEQGR---QYF 376
WN+++ G A +G ++ F M++ + KPD VT +++LSAC H +E G Y
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI 424
Query: 377 RDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGK 436
R +I+ Y ++ + R G+L EA+ + +M R + V +L + A+G
Sbjct: 425 RK----NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-DVVSYNTLFTAFAANGD 479
Query: 437 ----LQLAEKIVRELVEMD 451
L L K+ E +E D
Sbjct: 480 GVETLNLLSKMKDEGIEPD 498
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 176/337 (52%), Gaps = 23/337 (6%)
Query: 73 HARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXX 128
+ARK FD +P+ K V + A++ + ++L+LF +M +LG+ +
Sbjct: 216 NARKYFDRMPE--KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Query: 129 XXRLGDPNVGPQVHSGVVKFGFGKCTR----VCNAVMDLYVKFGLLGEARKVFGEIEVP- 183
DP++ +VK K R V A++D++ K + AR++F E+
Sbjct: 274 CSFRADPSLT----RSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR 329
Query: 184 SVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMV 243
++V+W ++ G + + S R +FD MP+RN V+W +I GY NG A ++M+
Sbjct: 330 NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 244 FGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGR 303
+ + VT+ SVLSAC D+ +G + + ++ L SL+ MYA+ G
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDY-IRKNQIKLNDSGYRSLIFMYARGGN 448
Query: 304 ISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSA 362
+ A VF M R+VV++N + A +G G +++ M +E ++PD VT+ ++L+A
Sbjct: 449 LWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508
Query: 363 CSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLL 399
C+ +GL+++G++ F+ + + P +HYACM DLL
Sbjct: 509 CNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 42/345 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
GKQ+H + GL S N FLR ++H+Y AC A+K+FDE S+ S + AL+R
Sbjct: 130 GKQVHVHIRINGLES--NEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYS--WNALLR 185
Query: 97 ------RCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGF 150
+ + L F EMR+LG+ ++ G + H+ +K G
Sbjct: 186 GTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGL 245
Query: 151 GKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
+ +++D+Y K G +G AR+VF D
Sbjct: 246 FNSVFLKTSLVDMYFKCGKVGLARRVF-------------------------------DE 274
Query: 211 MPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
+ ER+ V W MI G N EA L + M+ N V L ++L + +
Sbjct: 275 IVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKL 334
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLA 330
G+ VH +K+ + V + L+D+Y KCG ++ VF +RN ++W A++ G A
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 331 MHG-MGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQ 374
+G +A+ + E +PD VT +L C+ ++QG++
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 169/381 (44%), Gaps = 43/381 (11%)
Query: 37 GKQLHA-VATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI 95
GK++HA V + P F+ + ++ +Y C + R++F Q ++++ +TAL+
Sbjct: 335 GKEVHAHVLKSKNYVEQP--FVHSGLIDLYCKCGDMASGRRVFYGSKQ--RNAISWTALM 390
Query: 96 RRCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
++L+ + M+Q G D L G ++H +K F
Sbjct: 391 SGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFL 450
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ ++M +Y K G VP E +FD +
Sbjct: 451 PNVSLVTSLMVMYSKCG-------------VP------------------EYPIRLFDRL 479
Query: 212 PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
+RN AWT MI YV N + + + M+ + VT+ VL+ CS + +G
Sbjct: 480 EQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLS-KHRPDSVTMGRVLTVCSDLKALKLG 538
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAM 331
+ +HG +K ++ V ++ MY KCG + A F ++ + + W A++
Sbjct: 539 KELHGHILKK-EFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGC 597
Query: 332 HGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIE 390
+ + + ++ F MV P+ TF A+LS CS +G V++ ++F + +Y ++P E
Sbjct: 598 NELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE 657
Query: 391 HYACMVDLLGRAGHLEEAELL 411
HY+ +++LL R G +EEA+ L
Sbjct: 658 HYSLVIELLNRCGRVEEAQRL 678
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
G +N T ++L AC + + G+ VH ++ G + + T LV MY CG +
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVH-VHIRINGLESNEFLRTKLVHMYTACGSVKD 164
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGK--AVVDMFPHMVE 347
A VF + NV +WNA+L G + G + V+ F M E
Sbjct: 165 AQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALI- 95
G+Q+H++ V + ++F+ +++ +YA C S RK+FD + S++++V +T++I
Sbjct: 303 GRQVHSL--VVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM--SNRNTVTWTSIIA 358
Query: 96 ---RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
R E++ LF M++ L + +G +G ++H+ ++K K
Sbjct: 359 AHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEK 418
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
+ + ++ LY K GE+R F V +P
Sbjct: 419 NVYIGSTLVWLYCK---CGESRDAFN----------------------------VLQQLP 447
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
R+ V+WT MI G G EA LKEM+ G E N T S L AC+ S + +GR
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEMIQE-GVEPNPFTYSSALKACANSESLLIGR 506
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H A K V VG++L+ MYAKCG +S A VF +M +N+V+W A++ G A +
Sbjct: 507 SIHSIAKKNHALS-NVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARN 565
Query: 333 GMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVE 370
G + + + M E + D F +LS C L E
Sbjct: 566 GFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 172/388 (44%), Gaps = 50/388 (12%)
Query: 37 GKQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVDYTALIR 96
G+Q+H G+ NL + +++++ YA C + A + FD + + KD + +TA+I
Sbjct: 203 GRQVHGNMVKVGV---GNLIVESSLVYFYAQCGELTSALRAFDMMEE--KDVISWTAVIS 257
Query: 97 RCPP----LESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGK 152
C ++++ +FI M + G QVHS VVK
Sbjct: 258 ACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT 317
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
V ++MD+Y K G + + RKVF DGM
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVF-------------------------------DGMS 346
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
RN V WT +I + GF +EA L + M N +T+ S+L AC G + +G+
Sbjct: 347 NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR-HLIANNLTVVSILRACGSVGALLLGK 405
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+H +K + V +G++LV +Y KCG A V + + R+VV+W A++ G +
Sbjct: 406 ELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSL 464
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G +D M++E V+P+ T+ + L AC++S + GR + S+ + + +
Sbjct: 465 GHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRS----IHSIAKKNHALSN 520
Query: 392 Y---ACMVDLLGRAGHLEEAELLVKKMP 416
+ ++ + + G + EA + MP
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 73 HARKLFDEIPQSHKDSVDYTALI----RRCPPLESLQLFIEMRQLGLSI-DXXXXXXXXX 127
+ARK+FD +P+ K++V +TA+I + E+ LF + + G+ +
Sbjct: 135 YARKVFDSMPE--KNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLN 192
Query: 128 XXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVS 187
R + +G QVH +VK G G V ++++ Y + G L A + F +E V+S
Sbjct: 193 LCSRRAEFELGRQVHGNMVKVGVGNLI-VESSLVYFYAQCGELTSALRAFDMMEEKDVIS 251
Query: 188 WTVVLDGVV-KWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGC 246
WT V+ K G+++ M +G + + F F
Sbjct: 252 WTAVISACSRKGHGIKA----------------IGMFIGMLNHWFLPNEF---------- 285
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
T+CS+L ACS+ + GR VH VK M V VGTSL+DMYAKCG IS
Sbjct: 286 -------TVCSILKACSEEKALRFGRQVHSLVVKRM-IKTDVFVGTSLMDMYAKCGEISD 337
Query: 307 ALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSH 365
VF MS RN V W +++ A G G+ + +F M + + +T +++L AC
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 366 SGLVEQGRQYFRDLESVYEIRPEIEHY----ACMVDLLGRAGHLEEAELLVKKMPIRPNE 421
G + G++ + I+ IE + +V L + G +A +++++P R +
Sbjct: 398 VGALLLGKELHAQI-----IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DV 451
Query: 422 VVLGSLLGSCYAHG----KLQLAEKIVRELVEMDPLN 454
V +++ C + G L +++++E VE +P
Sbjct: 452 VSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 204 GRVVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMV-FGCGFELNCVTLCSVLSAC 262
R VFD MPE+N V WT MI GY+ G EAF L ++ V G F + +C +L+ C
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVC-LLNLC 194
Query: 263 SQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAW 322
S+ + +GR VHG VK +L +V +SLV YA+CG ++ AL F M ++V++W
Sbjct: 195 SRRAEFELGRQVHGNMVKVGVGNL--IVESSLVYFYAQCGELTSALRAFDMMEEKDVISW 252
Query: 323 NAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
AV+ + G G + MF M+ P+ T ++L ACS + GRQ L
Sbjct: 253 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ-VHSLVV 311
Query: 382 VYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAE 441
I+ ++ ++D+ + G + + + M R N V S++ AH + E
Sbjct: 312 KRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR-NTVTWTSIIA---AHAREGFGE 367
Query: 442 KIVRELVEMDPLNTEYHILLSNMYALS 468
E + + + H++ +N+ +S
Sbjct: 368 ----EAISLFRIMKRRHLIANNLTVVS 390
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 96/169 (56%), Gaps = 13/169 (7%)
Query: 466 ALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSH-PRTSEIYLKLDDM 524
LSG V + N+ R+ R I P S V G + S G+K S+ Y+KL +
Sbjct: 83 GLSGSVVR-NTVRKDTTLRHI--SPSSHSTKVRGDKPEISGGEKKAIVDRSKAYVKLKSL 139
Query: 525 ICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCFGLISTSSGSPL 584
+R AGYVP T VL D E E E+ L HSE+LA+ FG+I+T G+ +
Sbjct: 140 GKEVRDAGYVPETK-YVLH------DIDE--EAKEKALMHHSERLAIAFGIINTPPGTTI 190
Query: 585 YIFKNLRICQDCHSAIKIASNIYKREIVVRDRYRFHSFKQGSCSCSDYW 633
+ KNLRIC DCH+ IKI S+I REI+VRD RFH F+ G+CSC DYW
Sbjct: 191 RVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 164/353 (46%), Gaps = 40/353 (11%)
Query: 141 VHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVV 196
V S + KF F NA++ + K G++ E V+ +++ P++ ++ +++G+V
Sbjct: 174 VSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLV 233
Query: 197 KWEGVESGRVVFD----GMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNC 252
V+S VF+ G + + V + MI GY G T++A L++M G E +
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR-GHEADK 292
Query: 253 VTLCSVLSACSQSGDV--CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVV 310
+T +++ AC D CV + + G + + ++ K G+++ V
Sbjct: 293 ITYMTMIQACYADSDFGSCVALYQE---MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTV 349
Query: 311 FKNMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSH 365
F+NM R+ NV + ++ G A G + + + M++E KPD VT+ +++
Sbjct: 350 FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
Query: 366 SGLVEQGRQYFRD-------LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
+G VE+ YF + S++ Y+ ++D LG+AG ++EAE L ++M +
Sbjct: 410 NGRVEEALDYFHTCRFDGLAINSMF--------YSSLIDGLGKAGRVDEAERLFEEMSEK 461
Query: 419 ---PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM---DPLNTEYHILLSNMY 465
+ +L+ + H K+ A + + + E D Y ILLS M+
Sbjct: 462 GCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 195/468 (41%), Gaps = 36/468 (7%)
Query: 38 KQLHAVATVTGLLSSPNLFLRNAILHVYAACALPSHARKLFDEIPQS--HKDSVDYTALI 95
+ L+ V V SPNLF+ NA++ A LFD + + + V Y+ LI
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 96 ----RRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFG 151
RR +L EM GL + + GD + + ++
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 152 KCTRVCNAVMDLYVKFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVESGRVV 207
++M Y G + +A +++ E+ PS+ ++T +L G+ + + +
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 208 FDGMPE----RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACS 263
F+ M E N V + VMI GY G +AF LKEM G + + ++
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSYRPLIHGLC 588
Query: 264 QSGDVCVGR-WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV--- 319
+G + +V G + +L + T L+ + + G++ AL V + M +R V
Sbjct: 589 LTGQASEAKVFVDG--LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 320 -VAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFR 377
V + ++ G H K + M + +KPD V + +++ A S +G ++ +
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW- 705
Query: 378 DLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM-PIR--PNEVVLGSLL-----G 429
DL P Y +++ L +AG + EAE+L KM P+ PN+V G L G
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 430 SCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMYALSGKVEKANSF 477
++L I++ L+ NT + +L + G++E+A+
Sbjct: 766 EVDMQKAVELHNAILKGLLA----NTATYNMLIRGFCRQGRIEEASEL 809
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 175/456 (38%), Gaps = 65/456 (14%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDEIPQSH---KDSVDYTALIRRCPP----LESLQ 105
P L N IL+V+ P + E +S D+ Y LI C E+ Q
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 106 LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYV 165
+F EM+ G S D + P +V + +V GF N+++ Y
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 166 KFGLLGEARKVFGEI----EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP----ERNEV 217
+ G+L EA ++ ++ P V ++T +L G + VES +F+ M + N
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
+ I Y G E + E+ CG + VT ++L+ Q+G + V G
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINV-CGLSPDIVTWNTLLAVFGQNG---MDSEVSGV 476
Query: 278 --AVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV----AWNAVLGGLAM 331
+K G+ +L+ Y++CG A+ V++ M V +N VL LA
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 332 HGMGKAVVDMFPHMVE-EVKPDAVTFMALLSA---------------------------- 362
GM + + M + KP+ +T+ +LL A
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 363 -------CSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM 415
CS L+ + + F +L+ P+I MV + GR + +A ++ M
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKE-RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 416 PIR---PNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
R P+ SL+ +E+I+RE++
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 133/299 (44%), Gaps = 23/299 (7%)
Query: 207 VFDGMPERNEVAWTVMIVGYVGNGFTKE------AF-WLLKEMVFGCGFELNCVTLCSVL 259
+F+ ++ E + ++ G GF K+ AF W +K+ + + + V + ++
Sbjct: 123 LFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAI--II 180
Query: 260 SACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS---- 315
S + G V + ++ G+ L V TSL+ +A GR A+ VFK M
Sbjct: 181 SMLGKEGRVSSAANMFN-GLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 316 RRNVVAWNAVLGGLAMHGMG-KAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGR 373
+ ++ +N +L G + + M + + PDA T+ L++ C L ++
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299
Query: 374 QYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR---PNEVVLGSLLGS 430
Q F ++++ ++ Y ++D+ G++ +EA ++ +M + P+ V SL+ +
Sbjct: 300 QVFEEMKAAGFSYDKVT-YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 431 CYAHGKLQLAEKIVRELVE--MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIR 487
G L A ++ ++ E P Y LLS + +GKVE A S ++ G +
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG-FERAGKVESAMSIFEEMRNAGCK 416
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 169/380 (44%), Gaps = 41/380 (10%)
Query: 155 RVCNAVMDLYVKFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
R N+++ Y GL E+ K+F ++ PSV+++ +L ++K +FD
Sbjct: 139 RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDE 198
Query: 211 MPER-----NEVAWTVMIVGYVGNGFTKEAFWLLKEM-VFGCGFELNCVTLCSVLSACSQ 264
M + + +I G+ N EAF + K+M ++ C ++ VT +++ +
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDV--VTYNTIIDGLCR 256
Query: 265 SGDVCVGRWV-HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NV 319
+G V + V G KA V+ T+LV Y I A++VF +M R N
Sbjct: 257 AGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 320 VAWNAVLGGLAMHGMGKAVVDMF---PHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYF 376
V +N ++ GL+ + D+ PDA TF L+ A +G ++ + F
Sbjct: 317 VTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 377 RDLESVYEIRPEIEHYA------CMVDLLGRA----GHLEEAELLVKKMPIRPNEVVLGS 426
+++ ++ ++ P+ Y+ CM + RA L E E+L+ K +P
Sbjct: 377 QEMLNM-KLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNP 435
Query: 427 LLGSCYAHGKLQLAEKIVRELVE---MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKK 483
+ A+GK + AEK+ R+L++ DP Y L++ + GK + A ++ +
Sbjct: 436 MFEYLCANGKTKQAEKVFRQLMKRGVQDP--PSYKTLITG-HCREGKFKPAYELLVLMLR 492
Query: 484 RGIRKVPGMSS--IYVDGQL 501
R VP + + + +DG L
Sbjct: 493 REF--VPDLETYELLIDGLL 510
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 130/309 (42%), Gaps = 39/309 (12%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVK-FGFGKCTRVCNAV 160
ES++LF M+Q+G+S + G + + + + +G + N +
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 161 MDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFDGMPER-- 214
++ + K ++ EA ++F ++E+ P VV++ ++DG+ + V+ V GM ++
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT 275
Query: 215 ----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQS----- 265
N V++T ++ GY EA + +M+ G + N VT +++ S++
Sbjct: 276 DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDML-SRGLKPNAVTYNTLIKGLSEAHRYDE 334
Query: 266 -GDVCVG--RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV--- 319
D+ +G FA A +++ L+ + G + A+ VF+ M +
Sbjct: 335 IKDILIGGNDAFTTFAPDACTFNI-------LIKAHCDAGHLDAAMKVFQEMLNMKLHPD 387
Query: 320 -VAWNAVLGGLAMHGMGKAVVDMFPHMVE--------EVKPDAVTFMALLSACSHSGLVE 370
+++ ++ L M +F + E E KP A + + +G +
Sbjct: 388 SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTK 447
Query: 371 QGRQYFRDL 379
Q + FR L
Sbjct: 448 QAEKVFRQL 456
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 153/369 (41%), Gaps = 60/369 (16%)
Query: 103 SLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMD 162
+ +F +M + G+ D +G+ + Q + K TR ++
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 163 LYVKFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVESGRVVFDGMP----ER 214
Y K G + + +VF + VP+V ++ +++G+V+ +E + D M
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 215 NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV 274
NE +T ++ GY G T +AF + G +++ T ++L AC +S
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQ-NEGLDVDIFTYEALLKACCKS--------- 707
Query: 275 HGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV----VAWNAVLGGLA 330
GR+ AL V K MS RN+ +N ++ G A
Sbjct: 708 ---------------------------GRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 740
Query: 331 MHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEI 389
G D+ M +E VKPD T+ + +SACS +G + + Q ++E++ ++P I
Sbjct: 741 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL-GVKPNI 799
Query: 390 EHYACMVDLLGRAGHLEEA---ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAE----- 441
+ Y ++ RA E+A +K M I+P++ V LL S + + A
Sbjct: 800 KTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGV 859
Query: 442 -KIVRELVE 449
I +E+VE
Sbjct: 860 MTICKEMVE 868
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 18/246 (7%)
Query: 256 CSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
+++S + G V + + + A A G+ V ++L+ Y + G A+ VF +M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAF-AGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 316 ----RRNVVAWNAVLGGLAMHGMG-KAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLV 369
R N+V +NAV+ GM K V F M V+PD +TF +LL+ CS GL
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 370 EQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR---PNEVVLGS 426
E R F ++ + I ++ Y ++D + + G ++ A ++ +MP++ PN V +
Sbjct: 356 EAARNLFDEMTN-RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 427 LLGSCYAHGKLQLAEKIVREL----VEMDPLNTEYHILLSNMYALSGKVEKANSFRRVLK 482
++ G+ A + E+ + +D ++ Y+ LLS +Y G+ E+A R +
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVS--YNTLLS-IYTKVGRSEEALDILREMA 471
Query: 483 KRGIRK 488
GI+K
Sbjct: 472 SVGIKK 477
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 150/350 (42%), Gaps = 55/350 (15%)
Query: 131 RLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEV----PSVV 186
R G + ++ G+G +A++ Y + GL EA VF ++ P++V
Sbjct: 245 RYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLV 304
Query: 187 SWTVVLDG----------VVKW------EGVESGRVVFDGM------------------- 211
++ V+D V K+ GV+ R+ F+ +
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 212 -----PERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
E++ ++ ++ G AF +L +M N V+ +V+ +++G
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK-RIMPNVVSYSTVIDGFAKAG 423
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS----RRNVVAW 322
+ G ++ +G L + +L+ +Y K GR AL + + M+ +++VV +
Sbjct: 424 RFDEALNLFG-EMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 323 NAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
NA+LGG G V +F M E V P+ +T+ L+ S GL ++ + FR+ +S
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS 542
Query: 382 VYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP---IRPNEVVLGSLL 428
+R ++ Y+ ++D L + G + A L+ +M I PN V S++
Sbjct: 543 A-GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 23/288 (7%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
E+L LF EMR LG+++D ++G + + G K NA++
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 162 DLYVKFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKW----EGVESGRVVFDGMPE 213
Y K G E +KVF E++ +P++++++ ++DG K E +E R
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 214 RNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVC-VGR 272
+ V ++ +I NG A L+ EM G N VT S++ A +S +
Sbjct: 547 ADVVLYSALIDALCKNGLVGSAVSLIDEMT-KEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMH 332
+ +G ++ L + T G I L N + G +
Sbjct: 606 YSNGGSLPFSSSALSALTETE--------GNRVIQLFGQLTTESNNRTTKDCEEGMQEL- 656
Query: 333 GMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDL 379
++++F M + E+KP+ VTF A+L+ACS E +L
Sbjct: 657 ---SCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 207/491 (42%), Gaps = 47/491 (9%)
Query: 52 SPNLFLRNAILHVYAACALPSHARKLFDEIPQS--HKDSVDYTALI----RRCPPLESLQ 105
+P + N +LH Y A +L D + D Y LI R +
Sbjct: 265 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 324
Query: 106 LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYV 165
L +MR+ + + G + Q+ + ++ FG NA++D ++
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 166 KFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVESGRVVFDGMPERN-----E 216
G EA K+F +E PS VS+ V+LDG+ K + R + M +RN
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGR 443
Query: 217 VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHG 276
+ +T MI G NGF EA LL EM G + + VT ++++ + VGR+
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKD-GIDPDIVTYSALINGFCK-----VGRFKTA 497
Query: 277 FAVKAMGWDLGV----MVGTSLVDMYAKCGRISIALVVFKNM----SRRNVVAWNAVLGG 328
+ + +G+ ++ ++L+ + G + A+ +++ M R+ +N ++
Sbjct: 498 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTS 557
Query: 329 LAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI-- 385
L G + M + + P+ V+F L++ +SG +G + F + + ++
Sbjct: 558 LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG---EGLKAFSVFDEMTKVGH 614
Query: 386 RPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEK 442
P Y ++ L + GHL EAE +K + P + V+ +LL + G L A
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 674
Query: 443 IVRELVEMD--PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPG--MSSIYVD 498
+ E+V+ P + Y L+S + GK A F + + RG +P M + +VD
Sbjct: 675 LFGEMVQRSILPDSYTYTSLISGL-CRKGKTVIAILFAKEAEARG-NVLPNKVMYTCFVD 732
Query: 499 GQLH--QFSAG 507
G Q+ AG
Sbjct: 733 GMFKAGQWKAG 743
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 144/341 (42%), Gaps = 54/341 (15%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEVP----SVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
+ ++D + G + A +F E+E SVV++ ++ G+ K G ++ M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 214 R----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSA-CSQSGDV 268
R N + + V++ +V G +EA L KEM+ G N +T +++ C Q+
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLS 350
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNA 324
+ D ++ TSL+ Y R+ + VF+N+S+R N V ++
Sbjct: 351 EANNMLDLMVRNKCSPD--IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 325 VLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLE--- 380
++ G G K ++F MV V PD +T+ LL +G +E+ + F DL+
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 381 ---------SVYE----------------------IRPEIEHYACMVDLLGRAGHLEEAE 409
++ E ++P + Y M+ L + G L EA
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 410 LLVKKMP---IRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+L++KM PN+ +L+ + G L + K++ E+
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 294 LVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE- 348
+++ + +C + A V + + + +N ++ GL + G V + MVE
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
+PD VT+ ++++ SG R +E ++ ++ Y+ ++D L R G ++ A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 409 ELLVKKMP---IRPNEVVLGSLL-GSCYA----HGKLQLAEKIVRELVEMDPLNTEYHIL 460
L K+M I+ + V SL+ G C A G L L + + RE+V P +++L
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV---PNVITFNVL 304
Query: 461 LSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQ 503
L +++ GK+++AN + + RGI + +DG Q
Sbjct: 305 L-DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 147/322 (45%), Gaps = 27/322 (8%)
Query: 183 PSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEVAWTVMIVGYVGNGFTKEAFWL 238
P VV+ + +++G + V + M E + V + +I G G +A L
Sbjct: 137 PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196
Query: 239 LKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAV--KAMGWDL--GVMVGTSL 294
M G + VT S+++ G C GRW + + D+ V+ T++
Sbjct: 197 FDRMERD-GVRADAVTYNSLVA-----GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 295 VDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-V 349
+D++ K G+ S A+ +++ M+RR +V +N+++ GL MHG M MV +
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 350 KPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAE 409
PD VT+ L++ S V++G + FR++ + I Y ++ +AG + A+
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYFQAGRPDAAQ 369
Query: 410 LLVKKMPIRPN----EVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNTEYHILLSNMY 465
+ +M RPN ++L L + L L E + + +E+D T Y+I++ M
Sbjct: 370 EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI--TTYNIVIHGMC 427
Query: 466 ALSGKVEKANSFRRVLKKRGIR 487
+ G VE A R L +G++
Sbjct: 428 KI-GNVEDAWDLFRSLSCKGLK 448
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 145/324 (44%), Gaps = 24/324 (7%)
Query: 143 SGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTVVLDGVV------ 196
S + + GF + N ++D K GL+ +A ++F +E V + V + +V
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 197 -KWEGVESGRVVFDGMPER---NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNC 252
+W ++ R++ D + N + +T +I +V G EA L +EM C + +
Sbjct: 223 GRWS--DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDV 279
Query: 253 VTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFK 312
T S+++ G V + + V G V+ +L++ + K R+ +F+
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTK-GCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 313 NMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGL 368
M++R + + +N ++ G G A ++F M + +P+ T+ LL +
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM--DSRPNIRTYSILLYGLCMNWR 396
Query: 369 VEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP---IRPNEVVLG 425
VE+ F +++ EI +I Y ++ + + G++E+A L + + ++P+ V
Sbjct: 397 VEKALVLFENMQK-SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 426 SLLGSCYAHGKLQLAEKIVRELVE 449
+++ + ++ + R++ E
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQE 479
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 155/352 (44%), Gaps = 63/352 (17%)
Query: 160 VMDLYVKFGLL-------GEARKVFGE-IEV------PSVVSWTVVLDGVVKWEGVESGR 205
V+D+Y FG+L GE K F IE+ P+VV +T ++DG K +E +
Sbjct: 160 VLDVY-SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 206 VVFDGMPE----RNEVAWTVMIVGYVGNGFTKEAFWLLKEM----VFGCGFELNCV---- 253
+F M + NE +TV+I G NG K+ F + ++M VF + NCV
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 254 --------------------TLCSVLSACSQSGDVCVGRWVHGF-----AVKAMGWDLGV 288
C++++ + G +C ++ +K+ G + +
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 289 MVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFPH 344
+ +L+D + G++ AL + +++ R ++V +N ++ G G M
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 345 MVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAG 403
M E +KP VT+ L+ + S +E+ Q +E + + P++ Y+ ++ G
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL-GLVPDVHTYSVLIHGFCIKG 457
Query: 404 HLEEAELLVKKMPIR---PNEVVLGSL-LGSCYAHGKLQLAEKIVRELVEMD 451
+ EA L K M + PNEV+ ++ LG C G A K+++E+ E +
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYC-KEGSSYRALKLLKEMEEKE 508
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 151/357 (42%), Gaps = 25/357 (7%)
Query: 89 VDYTALIRRCPPLESLQ----LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSG 144
V YT LI C ++ LF EM +LGL + + G G +++
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
Query: 145 VVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVP----SVVSWTVVLDGVVKWEG 200
+ + G N VM+ K G +A +VF E+ ++V++ ++ G+ +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 201 VESGRVVFDGMPER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLC 256
+ V D M N + + +I G+ G G +A L +++ G + VT
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK-SRGLSPSLVTYN 377
Query: 257 SVLSACSQSGDVC-VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
++S + GD + V ++ G + T L+D +A+ + A+ + +M
Sbjct: 378 ILVSGFCRKGDTSGAAKMVK--EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 316 RRNVV----AWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVE 370
+V ++ ++ G + G +F MVE+ +P+ V + ++ G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 371 QGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVL 424
+ + +++E E+ P + Y M+++L + +EAE LV+KM I P+ +L
Sbjct: 496 RALKLLKEMEE-KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSIL 551
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 151/335 (45%), Gaps = 19/335 (5%)
Query: 166 KFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTV 221
KF + EA K+ + + P +++ +++G+ K V++ + +F +P+ V +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 222 MIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWV-HGFAVK 280
+I G+V +G +A +L +MV G + T S++ + G V + V H K
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 281 AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS----RRNVVAWNAVLGGLAMHGMGK 336
G V T LVD + K G+I A V MS + N V +N ++
Sbjct: 419 --GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 337 AVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACM 395
V++F M + KPD TF +L+S ++ RD+ S + + Y +
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT-YNTL 535
Query: 396 VDLLGRAGHLEEAELLVKKMPIRP---NEVVLGSLLGSCYAHGKLQLAEKIVRELVE--M 450
++ R G ++EA LV +M + +E+ SL+ G++ A + +++
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 451 DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRG 485
P N +IL++ + SG VE+A F++ + RG
Sbjct: 596 APSNISCNILINGL-CRSGMVEEAVEFQKEMVLRG 629
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 16/268 (5%)
Query: 160 VMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFDGMPER- 214
++D + K G + EA V E+ P+ V + ++ K + +F MP +
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 215 ---NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
+ + +I G K A WLL++M+ G N VT ++++A + G++
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMI-SEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLG 327
R + V G L + SL+ + G + A +F+ M R + ++ N ++
Sbjct: 549 RKLVNEMV-FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 328 GLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIR 386
GL GM + V+ MV PD VTF +L++ +G +E G FR L++ I
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA-EGIP 666
Query: 387 PEIEHYACMVDLLGRAGHLEEAELLVKK 414
P+ + ++ L + G + +A LL+ +
Sbjct: 667 PDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 135/297 (45%), Gaps = 21/297 (7%)
Query: 150 FGKCTRVC--NAVMDLYVKFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVES 203
+G VC N+++ Y K GL+G A +V ++ P+V S+T+++DG K ++
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 204 GRVVFDGMP----ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVL 259
V + M + N V + +I + EA + +EM G + + T S++
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLI 501
Query: 260 SACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNM----S 315
S + ++ W+ + G + +L++ + + G I A + M S
Sbjct: 502 SGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEV-KPDAVTFMALLSACSHSGLVEQGRQ 374
+ + +N+++ GL G +F M+ + P ++ L++ SG+VE+ +
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 375 YFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP---IRPNEVVLGSLL 428
+ +++ + P+I + +++ L RAG +E+ + +K+ I P+ V +L+
Sbjct: 621 FQKEM-VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 183/445 (41%), Gaps = 65/445 (14%)
Query: 68 CALPSHARKLFDEIPQSHK--DSVDYTALIRRCPPLESLQLFI----EMRQLGLSIDXXX 121
C A LF E+ QS VD+T ++ + + I +M LG+S D
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 122 XXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIE 181
R ++ + ++K GF ++++ + + EA + ++
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 182 ----VPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEVAWTVMIVGYVGNGFTK 233
VP+VV + V++G+ K + + VF M ++ + V + +I G +G
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 234 EAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTS 293
+A LL++MV D V+ T+
Sbjct: 237 DAARLLRDMV-------------------------------------KRKIDPNVIFFTA 259
Query: 294 LVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE- 348
L+D + K G + A ++K M RR NV +N+++ G +HG MF MV +
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYE-IRPEIEHYACMVDLLGRAGHLEE 407
PD VT+ L++ S VE G + F E Y+ + + Y ++ +AG L
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLF--CEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 408 AELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL--VEMDPLNTEYHILLS 462
A+ + +M + P+ V LL +GK++ A +V +L EMD Y+I++
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Query: 463 NMYALSGKVEKANSFRRVLKKRGIR 487
+ + K+++A R L ++G++
Sbjct: 438 GL-CRTDKLKEAWCLFRSLTRKGVK 461
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 121/267 (45%), Gaps = 24/267 (8%)
Query: 159 AVMDLYVKFGLLGEARKVFGEI----EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER 214
A++D +VK G L EAR ++ E+ VP+V ++ +++G + + +FD M +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 215 ----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCV 270
+ V + +I G+ + ++ L EM + G + T +++ Q+G + V
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 271 GRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVL 326
+ V V G ++ L+D G+I ALV+ +++ + +++ +N ++
Sbjct: 378 AQKVFNRMVDC-GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 327 GGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDL------ 379
GL K +F + + VKPDA+ ++ ++S GL + + R +
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Query: 380 --ESVYEIRPEIEHYACMVDLLGRAGH 404
E +Y+ +HY + L +A H
Sbjct: 497 PSERIYD-ETLRDHYTSLSAELIKAAH 522
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 137/299 (45%), Gaps = 24/299 (8%)
Query: 133 GDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIE----VPSVVSW 188
G G +++ ++ ++ N MD K G + R +F EI+ VP S+
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 189 TVVLDGVVKWEGVESGRVVFDGMPERNEV----AWTVMIVGYVGNGFTKEAFWLLKEMVF 244
++++ G++K +F M E+ V A+ ++I G+ G +A+ LL+EM
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 245 GCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAV----KAMGWDLGVMVGTSLVDMYAK 300
GFE VT SV+ ++ + R + + K+ +L V++ +SL+D + K
Sbjct: 616 K-GFEPTVVTYGSVIDGLAK-----IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 301 CGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVT 355
GRI A ++ + + ++ N+ WN++L L + F M E + P+ VT
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 356 FMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKK 414
+ L++ + ++++++ ++P Y M+ L +AG++ EA L +
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQK-QGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 11/229 (4%)
Query: 279 VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGK-A 337
++ +G++ V + T+L+ +AK GR+ AL + M ++ A + VL + + GK
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA-DIVLYNVCIDSFGKVG 252
Query: 338 VVDM---FPHMVEE--VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
VDM F H +E +KPD VT+ +++ + +++ + F LE + P Y
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAY 311
Query: 393 ACMVDLLGRAGHLEEAELLVKKMPIR---PNEVVLGSLLGSCYAHGKLQLAEKIVRELVE 449
M+ G AG +EA L+++ + P+ + +L GK+ A K+ E+ +
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 450 MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVD 498
N + +L +M +GK++ A R ++K G+ +I VD
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 49/303 (16%)
Query: 160 VMDLYVKFGLLGEARKVFGEIEVP----SVVSWTVVLDGVVKWEGVESGRVVFDGMPER- 214
++D K G L A +F E+E+ +++++ +++ G + G + M +R
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 215 ---NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
N V ++V+I +V G +EA L KEM+ G + +T S++ + +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKA 387
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA----WNAVLG 327
+ V + G D + L++ Y K RI L +F+ MS R VVA +N ++
Sbjct: 388 NQMVDLMV-SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 328 GLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLES----- 381
G G ++F MV +V P+ VT+ LL +G E+ + F +E
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 382 ---VYEI--------------------------RPEIEHYACMVDLLGRAGHLEEAELLV 412
+Y I +P ++ Y M+ L + G L EAELL
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 413 KKM 415
+KM
Sbjct: 567 RKM 569
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 121/263 (46%), Gaps = 13/263 (4%)
Query: 247 GFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISI 306
G N TL +++ + +C+ G +K +G++ + ++L++ GR+S
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLINGLCLEGRVSE 176
Query: 307 ALVVFKNM----SRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLS 361
AL + M + +++ N ++ GL + G + + MVE +P+AVT+ +L+
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 362 ACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR--- 418
SG + R +E I+ + Y+ ++D L + G L+ A L +M ++
Sbjct: 237 VMCKSGQTALAMELLRKMEE-RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 419 PNEVVLGSLLGSCYAHGKLQLAEKIVRELV--EMDPLNTEYHILLSNMYALSGKVEKANS 476
N + L+G G+ K++R+++ +++P + +L+ + + GK+ +A
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS-FVKEGKLREAEE 354
Query: 477 FRRVLKKRGIRKVPGMSSIYVDG 499
+ + RGI + +DG
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDG 377
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 158/351 (45%), Gaps = 27/351 (7%)
Query: 106 LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYV 165
++E+ G ++ + G+ + +V + K N +++ Y
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 166 KFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEV 217
K G L E ++ ++E P V +++ +++ + K ++ +FD M +R N+V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 218 AWTVMIVGYVGNG---FTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR-W 273
+T +I G+ NG KE++ + + G + + V ++++ ++GD+ R
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESY----QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV----VAWNAVLGGL 329
V G + + D + T+L+D + + G + AL + K M + + V ++A++ G+
Sbjct: 403 VDGMIRRGLRPD--KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 330 AMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
G M+ +KPD VT+ ++ A G + G + ++++S + P
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PS 519
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGK 436
+ Y +++ L + G ++ A++L+ M + P+++ +LL + H
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 174/413 (42%), Gaps = 77/413 (18%)
Query: 145 VVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEG 200
++ GF V N +M+ + K G + +A+KVF EI P+VVS+ +++G K
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 201 VESGRVVFDGMPERNEVAWTVMIVGYVGNGFTKE-----AFWLLKEMVFGCGFELNCVTL 255
++ G + M E++ V + N KE A L EM G N V
Sbjct: 291 LDEGFRLKHQM-EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC-KRGLIPNDVIF 348
Query: 256 CSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS 315
+++ S++G++ + + + + + G +++ +LV+ + K G
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQ-KMLSKGLQPDIVLYNTLVNGFCKNG------------- 394
Query: 316 RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQY 375
++VA ++ G+ G+ +PD +T+ L+ G
Sbjct: 395 --DLVAARNIVDGMIRRGL---------------RPDKITYTTLIDGFCRGG-------- 429
Query: 376 FRDLESVYEIRPEIEHYACMVDLLG---------RAGHLEEAELLVKKM---PIRPNEVV 423
D+E+ EIR E++ +D +G + G + +AE +++M I+P++V
Sbjct: 430 --DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 424 LGSLLGSCYAHGKLQLAEKIVRELVEMD---PLNTEYHILLSNMYALSGKVEKANSFRRV 480
++ + G Q K+++E+ + D P Y++LL+ + L G+++ A+
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEM-QSDGHVPSVVTYNVLLNGLCKL-GQMKNADMLLDA 545
Query: 481 LKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIYLKLDDMICRLRLAGY 533
+ G+ VP D + G H +S+ Y++ ++ LA Y
Sbjct: 546 MLNIGV--VPD------DITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASY 590
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 164/383 (42%), Gaps = 23/383 (6%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDEIPQSHKDSVD--YTALI----RRCPPLESLQL 106
P+ +A++ Y A +LFDE+ + + YT L+ + ++L L
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 107 FIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVK 166
F EM++ G S + G + + +++ G N +M++ K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 167 FGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEG-VESGRVVFDGMPERN----EV 217
G + E VF E+ + P+VVS+ V+ + + + V FD M + E
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
++++I GY ++A LL+EM GF CS+++A ++ +
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMD-EKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 278 AVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHG 333
+ G ++ V ++ + KCG++S A+ +F M + +V A+NA++ G+ G
Sbjct: 470 LKENFG-NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 334 MGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHY 392
M + M E + D + +L+ + +G+ + + F ++ I+P+ Y
Sbjct: 529 MINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS-GIKPDGVTY 587
Query: 393 ACMVDLLGRAGHLEEAELLVKKM 415
++ AG EEA ++++M
Sbjct: 588 NTLLGCFAHAGMFEEAARMMREM 610
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 135/283 (47%), Gaps = 21/283 (7%)
Query: 183 PSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGY--VGNGFTKEAFWLLK 240
P V+S+ ++DG + + S +V + + + IV + + NGF+K +L
Sbjct: 89 PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK--MKMLD 146
Query: 241 EMVFGCGFELNC-----VTLCSVLSACSQSGDVCVG-RWVHGFAVKAMGWDLGVMVGTSL 294
E+ G L C VT + + +SG++ + + H A+ + V+ T L
Sbjct: 147 EVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPN--VVTFTCL 204
Query: 295 VDMYAKCGRISIALVVFKNMSR----RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-V 349
+D Y K G + +A+ ++K M R NVV + A++ G G + +M+ MVE+ V
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264
Query: 350 KPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAE 409
+P+++ + ++ G + ++ + + +R +I Y ++ L G L+EA
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN-QGMRLDITAYGVIISGLCGNGKLKEAT 323
Query: 410 LLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE 449
+V+ M + P+ V+ +++ + + G+++ A + +L+E
Sbjct: 324 EIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 151/338 (44%), Gaps = 24/338 (7%)
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEI----EVPSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
CN +++ + + L A G++ PS+V++ +L+G + + V +FD M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 212 P----ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGD 267
+ N V + +I G + A LL M G + VT S++S SG
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGR 236
Query: 268 VC-VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAW 322
R V + + D V +L+D K GR+S A ++ M RR ++V +
Sbjct: 237 WSDATRMVSCMTKREIYPD--VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 323 NAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
+ ++ GL M+ +MF MV + PD VT+ L++ S VE G + F ++
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 382 VYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQ 438
+R + Y ++ RAG L AE + ++M + PN + LL +GK++
Sbjct: 355 RGVVRNTVT-YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 439 LAEKIVRELVE--MDPLNTEYHILLSNMYALSGKVEKA 474
A I+ ++ + MD Y+I++ M +G+V A
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGM-CKAGEVADA 450
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 116/271 (42%), Gaps = 36/271 (13%)
Query: 246 CGFELNCVTLCSVLS-ACSQSGD----------VCVGRWVHGFA--------------VK 280
C LNC CS LS A S G V G ++GF +
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 281 AMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGK 336
MG+ V++ +++D K ++ AL + M + +VV +N+++ GL G
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 337 AVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACM 395
M M + E+ PD TF AL+ AC G V + +++ ++ + P+I Y+ +
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR-RSLDPDIVTYSLL 297
Query: 396 VDLLGRAGHLEEAELLVKKMPIR---PNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
+ L L+EAE + M + P+ V L+ K++ K+ E+ +
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 453 L-NTEYHILLSNMYALSGKVEKANS-FRRVL 481
+ NT + +L Y +GK+ A FRR++
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 50/227 (22%)
Query: 167 FGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEVA 218
+ L EA ++FG + P VV+++++++G K + VE G +F M +R N V
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 219 WTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFA 278
+T++I GY G A + + MVF CG N +T +L HG
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVF-CGVHPNIITYNVLL---------------HGLC 407
Query: 279 VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGM 334
G+I ALV+ +M + ++V +N ++ G+ G
Sbjct: 408 DN---------------------GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 335 GKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLE 380
D++ + + + PD T+ ++ GL + FR ++
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 164/349 (46%), Gaps = 42/349 (12%)
Query: 143 SGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKW 198
S V K G T + NA+++ + G L +A K+F +++ P+ ++ ++ G K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 199 EGVESGRVVFD-----GMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCV 253
+E + D M + N+ +++ + +EA+ ++ +M G + + V
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ-SYGVKPDVV 496
Query: 254 TLCSVLSACSQSGDVC------VGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIA 307
T ++ A ++ G C + R +H VK V ++V+ Y + G++ A
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHN-KVKP-----NVRTCGTIVNGYCEEGKMEEA 550
Query: 308 LVVFKNMSR----RNVVAWNAVLGGL----AMHGMGKAVVDMFPHMVEEVKPDAVTFMAL 359
L F M N+ +N+++ G M G+G+ VVD+ VKPD VTF L
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE-VVDLMEEF--GVKPDVVTFSTL 607
Query: 360 LSACSHSGLVEQGRQYFRD-LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP-- 416
++A S G +++ + + D LE I P+I ++ + RAG E+AE ++ +M
Sbjct: 608 MNAWSSVGDMKRCEEIYTDMLEG--GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF 665
Query: 417 -IRPNEVVLGSLLGSCYAHGKLQLAEKIVREL---VEMDPLNTEYHILL 461
+RPN V+ ++ + G+++ A ++ +++ V + P T Y L+
Sbjct: 666 GVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 16/272 (5%)
Query: 160 VMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFDGMPER- 214
++D K G L A +F E+E+ ++++ ++ G + G + M +R
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 215 ---NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
N V ++V+I +V G +EA LLKEM+ G N +T S++ + +
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMM-QRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLG 327
+ + + G D +M L++ Y K RI L +F+ MS R N V +N ++
Sbjct: 388 IQMVDLMI-SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 328 GLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIR 386
G G + +F MV V+PD V++ LL +G +E+ + F +E ++
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK-SKME 505
Query: 387 PEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
+I Y ++ + A +++A L +P++
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 160/403 (39%), Gaps = 52/403 (12%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDEI--PQSHKDSVDYTALIRRCPPL----ESLQL 106
P+L N +L Y + S A F+ + + D+ + +I L ++L L
Sbjct: 114 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 173
Query: 107 FIEMRQLGLSI--DXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLY 164
F MR+ D G+ V +V G NA+M Y
Sbjct: 174 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 233
Query: 165 VKFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVESGRVVFDGM-PER---NE 216
G+ G A V G+I+ +P VVS+T +L+ + + VF M ER N
Sbjct: 234 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 293
Query: 217 VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHG 276
V + +I Y NGF EA + ++M G + N V++C++L+ACS+S V
Sbjct: 294 VTYNALIDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSKKKVNVDTVLS 352
Query: 277 FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGK 336
A ++ G +L S + Y + A+ ++++M ++
Sbjct: 353 -AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK------------------- 392
Query: 337 AVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMV 396
+VK D+VTF L+S + Y +++E + I E Y+ ++
Sbjct: 393 -----------KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL-SIPLTKEVYSSVL 440
Query: 397 DLLGRAGHLEEAELLVKKMPI---RPNEVVLGSLLGSCYAHGK 436
+ G + EAE + +M + P+ + S+L + A K
Sbjct: 441 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK 483
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 20/295 (6%)
Query: 288 VMVGTSLVDMYAKCGRISIALVVFKNMS----RRNVVAWNAVLGGLAMHGMGKAVVDMFP 343
V+ TS++ +Y+ G I VF+ M + N+V++NA++G A+HGM + +
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 344 HMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRA 402
+ + + PD V++ LL++ S + ++ F + +P + Y ++D G
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSN 306
Query: 403 GHLEEAELLVKKMP---IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD-PLNTEYH 458
G L EA + ++M I+PN V + +LL +C K + ++ LNT +
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 459 ILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIY 518
Y + ++EKA + + ++K+ ++ +I + G +P
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM-----SKYPEAISYL 421
Query: 519 LKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCF 573
+++D+ L Y VL S G TEA Q+ A E + +
Sbjct: 422 KEMEDLSIPLTKEVY-----SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 145/340 (42%), Gaps = 28/340 (8%)
Query: 183 PSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEVAWTVMIVGYVGNGFTKEAFWL 238
P V+++T++++ + GV + D M +R + V + V++ G G EA
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 239 LKEMVFGCGFELNCVTLCSVL-SACSQSGDVCVGRWVHGFAVKA----MGWDLGVMVGTS 293
L +M G + N +T +L S CS GRW+ + A G+ V+
Sbjct: 297 LNDMP-SSGCQPNVITHNIILRSMCS------TGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 294 LVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE- 348
L++ + G + A+ + + M + N +++N +L G ++ MV
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
PD VT+ +L+A G VE + L S P + Y ++D L +AG +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 409 ELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD--PLNTEYHILLSN 463
L+ +M ++P+ + SL+G GK+ A K E M P ++ ++
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 464 MYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQ 503
+ S + ++A F + RG + +I ++G ++
Sbjct: 529 LCK-SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 160/360 (44%), Gaps = 50/360 (13%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
++L LF EM G+ D G + ++ S +++ +A++
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 162 DLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFDGMPER--- 214
D +VK G L EA K++ E+ P + +++ +++G + ++ + +F+ M +
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 215 -NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
N V ++ +I G+ +E L +EM G N VT ++
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYTTL--------------- 439
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHG 333
+HGF +A D MV +V S+ + N++ +N +L GL +G
Sbjct: 440 IHGF-FQARDCDNAQMVFKQMV---------SVGV-------HPNILTYNILLDGLCKNG 482
Query: 334 -MGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
+ KA+V +F ++ ++PD T+ ++ +G VE G + F +L S+ + P +
Sbjct: 483 KLAKAMV-VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIA 540
Query: 392 YACMVDLLGRAGHLEEAELLVKKM----PIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
Y M+ R G EEA+ L+KKM P+ PN +L+ + G + + ++++E+
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 140/321 (43%), Gaps = 22/321 (6%)
Query: 172 EARKVFGEI----EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP----ERNEVAWTVMI 223
+A +FG++ PS+V + +L V K E + + M + +++ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 224 VGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMG 283
+ A +L +M+ G+E + VTL S+L+ S + + V+ MG
Sbjct: 126 NCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE-MG 183
Query: 284 WDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKAVV 339
+ T+L+ + S A+ + M +R ++V + V+ GL G +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 340 DMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDL 398
+ M + +++ D V + ++ ++ F ++++ IRP++ Y+ ++
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN-KGIRPDVFTYSSLISC 302
Query: 399 LGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE--MDPL 453
L G +A L+ M I PN V +L+ + GKL AEK+ E+++ +DP
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 454 NTEYHILLSNMYALSGKVEKA 474
Y L+ N + + ++++A
Sbjct: 363 IFTYSSLI-NGFCMHDRLDEA 382
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 160/403 (39%), Gaps = 52/403 (12%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDEI--PQSHKDSVDYTALIRRCPPL----ESLQL 106
P+L N +L Y + S A F+ + + D+ + +I L ++L L
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 305
Query: 107 FIEMRQLGLSI--DXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLY 164
F MR+ D G+ V +V G NA+M Y
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 365
Query: 165 VKFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVESGRVVFDGM-PER---NE 216
G+ G A V G+I+ +P VVS+T +L+ + + VF M ER N
Sbjct: 366 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 425
Query: 217 VAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHG 276
V + +I Y NGF EA + ++M G + N V++C++L+ACS+S V
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSKKKVNVDTVLS 484
Query: 277 FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGK 336
A ++ G +L S + Y + A+ ++++M ++
Sbjct: 485 -AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK------------------- 524
Query: 337 AVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMV 396
+VK D+VTF L+S + Y +++E + I E Y+ ++
Sbjct: 525 -----------KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL-SIPLTKEVYSSVL 572
Query: 397 DLLGRAGHLEEAELLVKKMPI---RPNEVVLGSLLGSCYAHGK 436
+ G + EAE + +M + P+ + S+L + A K
Sbjct: 573 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK 615
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 20/295 (6%)
Query: 288 VMVGTSLVDMYAKCGRISIALVVFKNMS----RRNVVAWNAVLGGLAMHGMGKAVVDMFP 343
V+ TS++ +Y+ G I VF+ M + N+V++NA++G A+HGM + +
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 344 HMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRA 402
+ + + PD V++ LL++ S + ++ F + +P + Y ++D G
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSN 438
Query: 403 GHLEEAELLVKKMP---IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD-PLNTEYH 458
G L EA + ++M I+PN V + +LL +C K + ++ LNT +
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 459 ILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSAGDKSHPRTSEIY 518
Y + ++EKA + + ++K+ ++ +I + G +P
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM-----SKYPEAISYL 553
Query: 519 LKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAHSEKLALCF 573
+++D+ L Y VL S G TEA Q+ A E + +
Sbjct: 554 KEMEDLSIPLTKEVY-----SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 154/349 (44%), Gaps = 20/349 (5%)
Query: 168 GLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVESGRVVFDGMP----ERNEVAW 219
G + A +F ++E +P+VV++ ++DG K ++ G + M E N +++
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 220 TVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAV 279
V+I G G KE ++L EM G+ L+ VT +++ + G+ +H +
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRR-GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 280 KAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMG 335
+ G V+ TSL+ K G ++ A+ M R N + ++ G + G
Sbjct: 338 RH-GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 336 KAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYAC 394
+ M + P VT+ AL++ +G +E D++ + P++ Y+
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE-KGLSPDVVSYST 455
Query: 395 MVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD 451
++ R+ ++EA + ++M I+P+ + SL+ + + A + E++ +
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 452 -PLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDG 499
P + + L N Y + G +EKA + ++G+ S+ ++G
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 147/327 (44%), Gaps = 16/327 (4%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
++L LF EM G+ + G + ++ S +++ +A++
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 162 DLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFDGMPER--- 214
D +VK G L EA K++ E+ P + +++ +++G + ++ + +F+ M +
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 215 -NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
N V + +I G+ +E L +EM G N VT +++ Q+GD + +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGL 329
+ V G ++ + L+D K G++ ALVVF+ + + ++ +N ++ G+
Sbjct: 452 IFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 330 AMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
G + D+F + ++ VKP+ + + ++S GL E+ FR+++ + P
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PN 569
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKM 415
Y ++ R G + L+K+M
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/419 (19%), Positives = 173/419 (41%), Gaps = 25/419 (5%)
Query: 53 PNLFLRNAILHVYAACALPSHARKLFDE--IPQSHKDSVDYTALIR----RCPPLESLQL 106
P++ +++L+ Y S A L D+ + + ++V + LI E++ L
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 107 FIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVK 166
M G D + GD ++ + + K + ++D
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 167 FGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEVA 218
+ + +A +F E++ P+VV++ ++ + + + M ER N V
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 219 WTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFA 278
++ +I +V G EA L EM+ + + T S+++ + + +
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 279 VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGM 334
+ + V+ +L+ + K R+ + +F+ MS+R N V +N ++ GL G
Sbjct: 387 ISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 335 GKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYA 393
+F MV + V PD +T+ LL G +E+ F L+ ++ P+I Y
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYN 504
Query: 394 CMVDLLGRAGHLEEAELLVKKMP---IRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE 449
M++ + +AG +E+ L + ++PN ++ +++ G + A+ + RE+ E
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 145/341 (42%), Gaps = 39/341 (11%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEI----EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPE 213
N ++DL L +A +FGE+ +PS+V + +L + K + V+ G
Sbjct: 54 NVLLDLK-----LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD--LVISLGERM 106
Query: 214 RN-EVAWTVMIVGYVGNGFTKEAFWLLKEMVFG----CGFELNCVTLCSVLSACSQSGDV 268
+N +++ + + N F + + L V G G+E + VTL S+L+
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG------Y 160
Query: 269 CVGRWVHGFA-----VKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NV 319
C G+ + + M + + +L+ + S A+ + M R ++
Sbjct: 161 CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
+ V+ GL G + + M + +++ D V + ++ A + V F +
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 379 LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHG 435
+++ IRP + Y ++ L G +A L+ M I PN V +L+ + G
Sbjct: 281 MDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Query: 436 KLQLAEKIVRELVE--MDPLNTEYHILLSNMYALSGKVEKA 474
KL AEK+ E+++ +DP Y L+ N + + ++++A
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLI-NGFCMHDRLDEA 379
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 25/283 (8%)
Query: 160 VMDLYVKFGLLGEARKVFGEIE----VPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER- 214
+MD K G +A+K+F ++ P+ V++T+++ G+ + + R +F M
Sbjct: 204 LMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSG 263
Query: 215 ---NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
+ VA ++ G+ G EAF LL+ + GF L S++ ++
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLR-LFEKDGFVLGLRGYSSLIDGLFRAR----- 317
Query: 272 RWVHGFAVKA----MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV----VAWN 323
R+ F + A +++ T L+ +K G+I AL + +M + + +N
Sbjct: 318 RYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYN 377
Query: 324 AVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESV 382
AV+ L G+ + + M E E PDA T L+ + +GLV + + F ++E
Sbjct: 378 AVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKS 437
Query: 383 YEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPI-RPNEVVL 424
P + + ++D L ++G L+EA LL+ KM + RP + L
Sbjct: 438 -GCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 146/321 (45%), Gaps = 23/321 (7%)
Query: 145 VVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVV---K 197
+V+ G+ NA++D K + +A F EIE P+VV++T +++G+ +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 198 WEGVESGRVVFDGMPER---NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVT 254
W ++ R++ D + ++ N + ++ ++ +V NG EA L +EMV + + VT
Sbjct: 241 WS--DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPDIVT 297
Query: 255 LCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNM 314
S+++ + + V + G V+ +L++ + K R+ + +F+ M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMV-SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 315 SRR----NVVAWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLV 369
S+R N V +N ++ G G + F M + PD T+ LL +G +
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 370 EQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP---IRPNEVVLGS 426
E+ F D++ E+ +I Y ++ + + G +EEA L + ++P+ V +
Sbjct: 417 EKALVIFEDMQK-REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 427 LLGSCYAHGKLQLAEKIVREL 447
++ G L E + ++
Sbjct: 476 MMSGLCTKGLLHEVEALYTKM 496
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 294 LVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFPHMVE-E 348
+++ + C ++S+AL + M + + V +++ G V + MVE
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
KPD V + A++ + + V +F+++E IRP + Y +V+ L + +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 409 ELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEM--DPLNTEYHILLSN 463
L+ M I PN + +LL + +GK+ A+++ E+V M DP Y L+ N
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI-N 303
Query: 464 MYALSGKVEKANSFRRVLKKRG 485
L ++++AN ++ +G
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKG 325
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 244 FGCGFELNCV--TLCSVLSACSQSGDVCVGRWVHGFAVK--------------AMGWDLG 287
F C F+++ L +L + V +G V+GF + +G+
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189
Query: 288 VMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFP 343
++ +++D K R++ A FK + R+ NVV + A++ GL +
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 344 HMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRA 402
M+ +++ P+ +T+ ALL A +G V + ++ F ++ + I P+I Y+ +++ L
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM-SIDPDIVTYSSLINGLCLH 308
Query: 403 GHLEEA----ELLVKKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNT--E 456
++EA +L+V K + + V +L+ +++ K+ RE+ + ++
Sbjct: 309 DRIDEANQMFDLMVSKGCL-ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 457 YHILLSNMYALSGKVEKANSF 477
Y+ L+ + +G V+KA F
Sbjct: 368 YNTLIQGFFQ-AGDVDKAQEF 387
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 149/331 (45%), Gaps = 22/331 (6%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVK----WEGVESGRVVFD 209
NA+++ Y K G + A ++ +E P+V ++ +++G+ + ++ V + + D
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 210 GMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGC-GFELNCVTLCSVLSACSQSGDV 268
+ V++ V+I G G A+ LL M C E +C+T ++++A + G
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM--NCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV----AWNA 324
V G ++ G L + GT+L+D K G+ AL + + + + ++ + N
Sbjct: 493 DVASAFLGLMLRK-GISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 325 VLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVY 383
+L L+ K + M + + + P VT+ L+ SG + G +L +
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI-TGSFRILELMKLS 610
Query: 384 EIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP---IRPNEVVLGSLLGSCYAHGKLQLA 440
P + Y +++ L + G +EEAE L+ M + PN V ++ +GKL A
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 441 EKIVRELVEMD-PLNTEYHILLSNMYALSGK 470
+ VR +VE LN + L + LS K
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 141/328 (42%), Gaps = 24/328 (7%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIE-------VPSVVSWTVVLDGVVKWEGVESGRVVFDG 210
N ++D Y K G G+ K ++ P++ ++ +++DG K + + VF
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321
Query: 211 MPER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSG 266
M ++ N +++ +I G G EA + +MV G + N +T ++++ ++
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV-SAGVQPNLITYNALINGFCKND 380
Query: 267 DVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVV----AW 322
+ + G +VK G + L+D Y K G+I + + M R +V +
Sbjct: 381 MLKEALDMFG-SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439
Query: 323 NAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESV 382
N ++ GL +G +A +F + + PD VTF L+ G + +++ S
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEM-SK 498
Query: 383 YEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP----IRPNEVVLGSLLGSCYAHGKLQ 438
++P Y ++ + G+L+ A + +M +R N LL GKL+
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 439 LAEKIVRELVE--MDPLNTEYHILLSNM 464
A ++ E++E + P Y I+ M
Sbjct: 559 DANMLLNEMLEKGLVPNRITYEIVKEEM 586
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 127/278 (45%), Gaps = 23/278 (8%)
Query: 159 AVMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVV---KWEGVESGRVVFDGM 211
++D K G + A +F ++E P VV +T +++G+ +W +S + GM
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS---LLRGM 238
Query: 212 PER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGD 267
+R + + + +I +V G +A L EM+ N T S+++ G
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI-RMSIAPNIFTYTSLINGFCMEGC 297
Query: 268 VCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWN 323
V R + + ++ G V+ TSL++ + KC ++ A+ +F MS++ N + +
Sbjct: 298 VDEARQMF-YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356
Query: 324 AVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLES- 381
++ G G ++F HMV V P+ T+ LL ++G V++ F D++
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 382 -VYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMPIR 418
+ + P I Y ++ L G LE+A ++ + M R
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 208/470 (44%), Gaps = 78/470 (16%)
Query: 52 SPNLFLRNAILHVYAACALPSHARKLFDEIPQSH--KDSVDYTAL----IRRCPPLESLQ 105
+P+L N++++VY L AR L E+ ++ ++V Y+ L + LE+L
Sbjct: 257 TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 316
Query: 106 LFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYV 165
+F EM+++ ++D CN ++D+Y
Sbjct: 317 VFAEMKEVNCALDLT-----------------------------------TCNIMIDVYG 341
Query: 166 KFGLLGEARKVFGEIEV----PSVVSWTVVL----DGVVKWEGVESGRVVFDGMPERNEV 217
+ ++ EA ++F + P+VVS+ +L + + E + R++ E+N V
Sbjct: 342 QLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVV 401
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGF 277
+ MI Y ++A L++EM G E N +T +++S ++G + R F
Sbjct: 402 TYNTMIKIYGKTMEHEKATNLVQEMQ-SRGIEPNAITYSTIISIWGKAGKL--DRAATLF 458
Query: 278 -AVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGK 336
+++ G ++ ++ +++ Y + G + A + + + + + LA G +
Sbjct: 459 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTE 518
Query: 337 AVVDMFPHMVE--EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIR-----PEI 389
+F E EVK D F +++ L + ++Y +E ++R P+
Sbjct: 519 EATWVFRQAFESGEVK-DISVFGCMIN------LYSRNQRYVNVIEVFEKMRTAGYFPDS 571
Query: 390 EHYACMVDLLGRAGHLEEAELLVKKMP----IRPNEVVLGSLLGSCYAHGK-LQLAEKIV 444
A +++ G+ E+A+ + ++M + P+EV L S Y+ K ++ E +
Sbjct: 572 NVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML--SLYSSKKDFEMVESLF 629
Query: 445 RELVEMDP-LNT-EYHILLSNMYALSGKVEKANSFRRVLKKRGIRK-VPG 491
+ L E DP +N+ E H++++ +Y + K+ A+ +++RGI K PG
Sbjct: 630 QRL-ESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFPG 678
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 155/346 (44%), Gaps = 42/346 (12%)
Query: 182 VPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEVAWTVMIVGYVGNGFTKEAFW 237
P ++ +++ + V++ R +FD MPE+ NE + +++ GY G T +
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 238 LLKEMVFGCGFELNCVTLCSVLSA-CSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVD 296
LL M G N V +++S+ C + + + V + + D ++ S +
Sbjct: 204 LLNAME-SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD--IVTFNSRIS 260
Query: 297 MYAKCGRISIALVVFKNMS--------RRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE 348
K G++ A +F +M R N + +N +L G G+ + +F + E
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
Query: 349 VKPDAVTFMALLSACSHS----GLVEQGRQYFRDLESVYE------IRPEIEHYACMVDL 398
L S S++ GLV G+ F + E+V + I P I Y ++D
Sbjct: 321 DD--------LASLQSYNIWLQGLVRHGK--FIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 399 LGRAGHLEEAELLV---KKMPIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDPLNT 455
L + G L +A+ +V K+ + P+ V G LL + GK+ A+ +++E++ + L
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 456 EY--HILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDG 499
Y +ILL +++ + G++ +A R + ++G +I VDG
Sbjct: 431 AYTCNILLHSLWKM-GRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 107/266 (40%), Gaps = 22/266 (8%)
Query: 237 WLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVD 296
WL K+MV CG T ++ A S V R + + G LV
Sbjct: 133 WLYKDMVL-CGIAPQTYTFNLLIRALCDSSCVDAARELFD-EMPEKGCKPNEFTFGILVR 190
Query: 297 MYAKCGRISIALVVFKNMSR----RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKP 351
Y K G L + M N V +N ++ G M M EE + P
Sbjct: 191 GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP 250
Query: 352 DAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI---RPEIEHYACMVDLLGRAGHLEEA 408
D VTF + +SA G V + F D+E + RP Y M+ + G LE+A
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 409 ELLVKKMPIRPNEVVLGSL------LGSCYAHGKLQLAEKIVRELVE--MDPLNTEYHIL 460
+ L + IR N+ L SL L HGK AE +++++ + + P Y+IL
Sbjct: 311 KTLFES--IREND-DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 461 LSNMYALSGKVEKANSFRRVLKKRGI 486
+ + L G + A + ++K+ G+
Sbjct: 368 MDGLCKL-GMLSDAKTIVGLMKRNGV 392
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 138/338 (40%), Gaps = 52/338 (15%)
Query: 160 VMDLYVKFGLLGEARKVFGEIEVP----SVVSWTVVLDGVVKWEGVESGRVVFDGMPER- 214
++D K G L A +F E+E+ ++ +T ++ G + G + M +R
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 215 ---NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVG 271
+ VA++ +I +V G +EA L KEM+ G + VT S++ + +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKA 371
Query: 272 RWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVA----WNAVLG 327
+ V + G + L++ Y K I L +F+ MS R VVA +N ++
Sbjct: 372 NHMLDLMV-SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 328 GLAMHGMGKAVVDMFPHMV-EEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLES----- 381
G G + ++F MV V+PD V++ LL +G E+ + F +E
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 382 ---VYEI--------------------------RPEIEHYACMVDLLGRAGHLEEAELLV 412
+Y I +P+++ Y M+ L + G L EA+LL
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 413 KKMPI---RPNEVVLGSLLGSCYAHGKLQLAEKIVREL 447
+KM PN L+ + G + K++ E+
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 127/284 (44%), Gaps = 14/284 (4%)
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
E + V ++ +I G G EA L+ MV G + +TL ++++ +G V
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMV-EMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 273 WVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV----VAWNAVLGG 328
+ V+ G+ + ++ + K G+ ++A+ + + M R + V ++ ++ G
Sbjct: 198 LLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 329 LAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRP 387
L G ++F M ++ K D + + L+ ++G + G + RD+ +I P
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK-RKITP 315
Query: 388 EIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIV 444
++ ++ ++D + G L EAE L K+M I P+ V SL+ +L A ++
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 445 RELVEM--DPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGI 486
+V P ++IL+ N Y + ++ R + RG+
Sbjct: 376 DLMVSKGCGPNIRTFNILI-NGYCKANLIDDGLELFRKMSLRGV 418
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 24/272 (8%)
Query: 250 LNCVTLCSVLSACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALV 309
++C C+ LS C+G+ + +G++ ++ SLV+ + R A+
Sbjct: 121 IDCFCRCARLSLALS----CLGKMM------KLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 310 VFKNM----SRRNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACS 364
+ + NVV +N ++ L G +D+ HM + ++PD VT+ +L++
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 365 HSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNE 421
HSG + D+ + I P++ ++ ++D+ G+ G L EA+ +M + PN
Sbjct: 231 HSGTWGVSARILSDMMRM-GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 422 VVLGSLLGSCYAHGKLQLAEKIVRELVEMD--PLNTEYHILLSNMYALSGKVEKANSFRR 479
V SL+ HG L A+K++ LV P Y+ L+ N Y + +V+
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI-NGYCKAKRVDDGMKILC 348
Query: 480 VLKKRGIRKVPGMSSIYVDG--QLHQFSAGDK 509
V+ + G+ + G Q +FSA +K
Sbjct: 349 VMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 159/351 (45%), Gaps = 28/351 (7%)
Query: 131 RLGDPNVGPQVHSGVVKFGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEVPSVVSWTV 190
+ G ++ ++ +VK G R A++D Y + G EA ++ E+ +V TV
Sbjct: 303 KAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTV 362
Query: 191 VLDGVVKW---EG-VESGRVVFDGMPERN----EVAWTVMIVGYVGNGFTKEAFWLLKEM 242
+ + +V W EG +E V M +N +++ G NG+ KEA +++
Sbjct: 363 IYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQI 422
Query: 243 VFGCGFELNCVTLCSVLSACSQSGDV-CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKC 301
E + V +++ + + C + + V+ + D + GT L+D Y K
Sbjct: 423 SEKKLVE-DIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLD-AISFGT-LIDGYLKE 479
Query: 302 GRISIALVVFKNMSR----RNVVAWNAVLGGLAMHGMGKAVVDMFPHMVEEVKPDAVTFM 357
G++ AL ++ M + N+V +N+++ GL+ GM A + M E+K D VT+
Sbjct: 480 GKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM--EIK-DIVTYN 536
Query: 358 ALLSACSHSGLVEQGRQYFRDLESVY-EIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP 416
LL+ +G VE+ ++ E + + M++ L + G E+A+ ++K M
Sbjct: 537 TLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMV 596
Query: 417 IR---PNEVVLGSLLGSCYAHGKLQLAEKIVR--ELVEMDPLNTEYHILLS 462
R P+ + G+L+ S H + EK+V + + + + HI LS
Sbjct: 597 ERGVVPDSITYGTLITSFSKH---RSQEKVVELHDYLILQGVTPHEHIYLS 644
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 143/324 (44%), Gaps = 28/324 (8%)
Query: 183 PSVVSWTVVLDGVVKWEGVESGRVVFDGMPERNEVAWTVMIVGYVGNGFTK-----EAFW 237
P +V++ V++G+ K + + + M E+ ++ V+I V + K +A
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 238 LLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKA----MGWDLGVMVGTS 293
L EM G + T S++S GRW + + + V+ S
Sbjct: 262 LFTEMD-NKGIRPDVFTYSSLISCLCN-----YGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 294 LVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKAVVDMFPHMV-EE 348
L+D +AK G++ A +F M +R N+V +N+++ G MH +F MV ++
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 349 VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLLGRAGHLEEA 408
PD VT+ L++ + V G + FRD+ + + Y ++ +A + A
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT-YTTLIHGFFQASDCDNA 434
Query: 409 ELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVREL--VEMDPLNTEYHILLSN 463
+++ K+M + PN + +LL +GKL+ A + L +M+P Y+I+
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 464 MYALSGKVEKANSFRRVLKKRGIR 487
M +GKVE L +G++
Sbjct: 495 M-CKAGKVEDGWDLFCSLSLKGVK 517
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 145/323 (44%), Gaps = 22/323 (6%)
Query: 170 LGEARKVFGEI----EVPSVVSWTVVLDGVVKWEGVESGRVVFDGMP----ERNEVAWTV 221
L EA +FGE+ PS+V ++ +L + K + + + M N + +
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 222 MIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKA 281
MI A +L +M+ G+ + VTL S+L+ + + V+
Sbjct: 106 MINCLCRRSQLSFALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE- 163
Query: 282 MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKA 337
MG+ + T+LV + + S A+ + + M + ++V + AV+ GL G
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 338 VVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMV 396
+++ M + +++ D V + ++ + V+ F ++++ IRP++ Y+ ++
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN-KGIRPDVFTYSSLI 282
Query: 397 DLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE--MD 451
L G +A L+ M I PN V SL+ + GKL AEK+ E+++ +D
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 452 PLNTEYHILLSNMYALSGKVEKA 474
P Y+ L+ N + + ++++A
Sbjct: 343 PNIVTYNSLI-NGFCMHDRLDEA 364
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 176/433 (40%), Gaps = 57/433 (13%)
Query: 37 GKQLHAVATVTGLL---SSPNLFLRNAILHVYAACALPSHARKLFDEIPQS--HKDSVDY 91
K AVA V ++ P+L A+++ P A L +++ + D V Y
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 92 TALIRRCPPL----ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVK 147
+ +I ++L LF EM G+ D G + ++ S +++
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 148 FGFGKCTRVCNAVMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVES 203
N+++D + K G L EA K+F E+ P++V++ +++G + ++
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 204 GRVVFDGMPERN----EVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVL 259
+ +F M ++ V + +I G+ + L ++M G N VT ++
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR-GLVGNTVTYTTL- 421
Query: 260 SACSQSGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNV 319
+HGF +A D MV +V + N+
Sbjct: 422 --------------IHGF-FQASDCDNAQMVFKQMV----------------SDGVHPNI 450
Query: 320 VAWNAVLGGLAMHGMGKAVVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRD 378
+ +N +L GL +G + + +F ++ + +++PD T+ + +G VE G F
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 379 LESVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM----PIRPNEVVLGSLLGSCYAH 434
L S+ ++P++ Y M+ + G EEA L KM P+ P+ +L+ +
Sbjct: 511 L-SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTLIRAHLRD 568
Query: 435 GKLQLAEKIVREL 447
G + ++++E+
Sbjct: 569 GDKAASAELIKEM 581
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 146/327 (44%), Gaps = 16/327 (4%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
++L LF EM G+ + G + ++ S +++ +A++
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 162 DLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFDGMPER--- 214
D +VK G L EA K++ E+ P + +++ +++G + ++ + +F+ M +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 215 -NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRW 273
N V + +I G+ E L +EM G N VT +++ Q+ + C
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMS-QRGLVGNTVTYTTLIHGFFQARE-CDNAQ 451
Query: 274 VHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGL 329
+ + + G +M + L+D G++ ALVVF+ + R ++ +N ++ G+
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 330 AMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPE 388
G + D+F + ++ VKP+ VT+ ++S GL E+ FR+++ + P+
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PD 570
Query: 389 IEHYACMVDLLGRAGHLEEAELLVKKM 415
Y ++ R G + L+++M
Sbjct: 571 SGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 160/368 (43%), Gaps = 27/368 (7%)
Query: 156 VCNAVMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFDGM 211
+ N ++D + + +A +F E++ P+VV++ ++ + + + M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 212 PER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGD 267
ER N V ++ +I +V G EA L EM+ + + T S+++
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDR 376
Query: 268 VCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLG 327
+ + + + + V+ +L+ + K R+ + +F+ MS+R +V N V
Sbjct: 377 LDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG-NTVTY 434
Query: 328 GLAMHGMGKA-----VVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
+HG +A +F MV + V PD +T+ LL ++G VE F L+
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 382 VYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKMP---IRPNEVVLGSLLGSCYAHGKLQ 438
++ P+I Y M++ + +AG +E+ L + ++PN V +++ G +
Sbjct: 495 S-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 439 LAEKIVRELVEMDPL--NTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSI- 495
A+ + RE+ E PL + Y+ L+ A +KA S + + R R V S+I
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIR---AHLRDGDKAASAELIREMRSCRFVGDASTIG 610
Query: 496 YVDGQLHQ 503
V LH
Sbjct: 611 LVTNMLHD 618
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 141/323 (43%), Gaps = 22/323 (6%)
Query: 170 LGEARKVFGEI----EVPSVVSWTVVLDGVVKWEG----VESGRVVFDGMPERNEVAWTV 221
L +A +FG++ PS+V ++ +L + K + G + + N +++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 222 MIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKA 281
+I + A +L +M+ G+E + VTL S+L+ + + G V+
Sbjct: 122 LINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE- 179
Query: 282 MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHGMGKA 337
MG+ +L+ + R S A+ + M + ++V + V+ GL G
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 338 VVDMFPHMVE-EVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMV 396
+ + M + +++P V + ++ A + V F ++++ IRP + Y ++
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN-KGIRPNVVTYNSLI 298
Query: 397 DLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVE--MD 451
L G +A L+ M I PN V +L+ + GKL AEK+ E+++ +D
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 452 PLNTEYHILLSNMYALSGKVEKA 474
P Y L+ N + + ++++A
Sbjct: 359 PDIFTYSSLI-NGFCMHDRLDEA 380
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 16/238 (6%)
Query: 158 NAVMDLYVKFGLLGEARKVFGEIE-----VPSVVSWTVVLDGVVKWEGVESGRVVFDGMP 212
NA++D +VK G L EA K++ E+ P VV++ ++ G K++ VE G VF M
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 213 ER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDV 268
+R N V +T +I G+ A + K+MV G + +T +L +G+V
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPDIMTYNILLDGLCNNGNV 442
Query: 269 CVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMS----RRNVVAWNA 324
V + K L ++ T++++ K G++ +F ++S + NVV +
Sbjct: 443 ETALVVFEYMQKR-DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 325 VLGGLAMHGMGKAVVDMFPHMVEEVK-PDAVTFMALLSACSHSGLVEQGRQYFRDLES 381
++ G G+ + +F M E+ P++ T+ L+ A G + +++ S
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 170/419 (40%), Gaps = 39/419 (9%)
Query: 163 LYVKFGLLGEARKV-FGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEV 217
L + +LG+ K+ +G PS+V+ +L+G + + D M E + V
Sbjct: 126 LSLALAILGKMMKLGYG----PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 218 AWTVMIVGYVGNGFTKEAFWLLKEMVF-GCGFELNCVTLCSVLSACSQSGDVCVGRWVHG 276
+T ++ G + EA L++ MV GC +L VT +V++ + G+ + +
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL--VTYGAVINGLCKRGEPDLALNLLN 239
Query: 277 FAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMH 332
K + V++ +++D K + A +F M + +V +N ++ L +
Sbjct: 240 KMEKG-KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 333 GMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEIRPEIEH 391
G + M+E+ + PD V F AL+ A G + + + + ++ P++
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 392 YACMVDLLGRAGHLEEAELLVKKMPIR---PNEVVLGSLLGSCYAHGKLQLAEKIVRELV 448
Y ++ + +EE + ++M R N V +L+ + A+ + +++V
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 449 E--MDPLNTEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDGQLHQFSA 506
+ P Y+ILL + +G VE A ++KR ++ + ++
Sbjct: 419 SDGVHPDIMTYNILLDGLCN-NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 507 GDKSHPRTSEIYLKLDDMICRLRLAGYVPNTTCQVLFGCSSSGDCTEALEEVEQVLFAH 565
D D+ C L L G PN V + SG C + L+E LF
Sbjct: 478 EDGW------------DLFCSLSLKGVKPNV---VTYTTMMSGFCRKGLKEEADALFVE 521
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 184/408 (45%), Gaps = 34/408 (8%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKCTRVCNAVM 161
+ LF M Q G+ D + G +G ++ S + G V ++ +
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 162 DLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVK----WEGV-ESGRVVFDGMP 212
D+YVK G L A V+ + P+VV++T+++ G+ + +E G+++ GM
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM- 422
Query: 213 ERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQSGDVCVGR 272
E + V ++ +I G+ G + F L ++M+ G+ + V ++ S+ G
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMI-KMGYPPDVVIYGVLVDGLSKQG-----L 476
Query: 273 WVHG--FAVKAMGWD--LGVMVGTSLVDMYAKCGRISIALVVFKNMS----RRNVVAWNA 324
+H F+VK +G L V+V SL+D + + R AL VF+ M + +V +
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 325 VLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSA-CSHSGLVEQGRQYFRDLESV 382
V+ M G + + +F M + ++PDA+ + L+ A C H G Q F DL
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK-PTIGLQLF-DLMQR 594
Query: 383 YEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQL 439
+I +I ++ LL + +E+A + + P+ V +++ + +L
Sbjct: 595 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 654
Query: 440 AEKIVRELVEMDPL--NTEYHILLSNMYALSGKVEKANSFRRVLKKRG 485
AE+I EL+++ P NT +L ++ + ++ A ++ ++G
Sbjct: 655 AERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 11/248 (4%)
Query: 206 VVFDGMPERNEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQS 265
+V D P N V + +I G+ G AF L K M G E + + +++ ++
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME-QRGIEPDLIAYSTLIDGYFKA 334
Query: 266 GDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNM----SRRNVVA 321
G + +G + A+ G L V+V +S +D+Y K G ++ A VV+K M NVV
Sbjct: 335 GMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 322 WNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLE 380
+ ++ GL G M+ +++ ++P VT+ +L+ G + G + D+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 381 SVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKL 437
+ P++ Y +VD L + G + A KM IR N VV SL+ +
Sbjct: 454 KM-GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 438 QLAEKIVR 445
A K+ R
Sbjct: 513 DEALKVFR 520
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 33/300 (11%)
Query: 102 ESLQLFIEMRQLGLSIDXXXXXXXXX---------XXXRLGDPNVGPQVHSGVVKFGFGK 152
++L LF EM G+ + RL + +++ VV F
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF---- 333
Query: 153 CTRVCNAVMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVF 208
NA++D +VK G L EA K++ E+ P + +++ +++G + ++ + +F
Sbjct: 334 -----NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 209 DGMPER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQ 264
+ M + N V + +I G+ E L +EM G N VT +++ Q
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS-QRGLVGNTVTYTTLIHGFFQ 447
Query: 265 SGDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVV 320
+ D + V V G +M +L+D K G++ A+VVF+ + R +
Sbjct: 448 ARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 321 AWNAVLGGLAMHGMGKAVVDMFPHM-VEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDL 379
+N ++ G+ G + D+F + ++ VKPD + + ++S GL E+ FR +
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 140/332 (42%), Gaps = 52/332 (15%)
Query: 167 FGLLGEARKVFGEIEVPSVVSWTVVLDGVVKWEGVESGRVVFDGMPER----NEVAWTVM 222
LLG+ K+ E PS+V+ + +L+G + + + D M E + + +T +
Sbjct: 140 LALLGKMMKLGYE---PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 223 IVGYVGNGFTKEAFWLLKEMV-FGCGFELNCVTLCSVLSACSQSGDVCVGRWVHGFAVKA 281
I G + EA L+ MV GC + N VT V++ + GD+
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGC--QPNLVTYGVVVNGLCKRGDI------------- 241
Query: 282 MGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRRNVVAWNAVLGGLAMHGMGKAVVDM 341
DL + ++ A + NVV ++ V+ L + +++
Sbjct: 242 ---DLA----------FNLLNKMEAAKI------EANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 342 FPHMVEE-VKPDAVTFMALLSA-CSHSGLVEQGRQYFRDLESVYEIRPEIEHYACMVDLL 399
F M + V+P+ +T+ +L+S C++ + R +E +I P + + ++D
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER--KINPNVVTFNALIDAF 340
Query: 400 GRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMD--PLN 454
+ G L EAE L +M I P+ SL+ H +L A+ + ++ D P
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 455 TEYHILLSNMYALSGKVEKANSFRRVLKKRGI 486
Y+ L+ N + + ++++ R + +RG+
Sbjct: 401 VTYNTLI-NGFCKAKRIDEGVELFREMSQRGL 431
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 146/335 (43%), Gaps = 16/335 (4%)
Query: 94 LIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
L R C E+ + F EM + G+ D + GD + +
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFD 209
A++ + + G + EA K+F E+ P V++T +++G K ++ V +
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 210 GMPER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQS 265
M + N V +T +I G G A LL EM + G + N T S+++ +S
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKS 504
Query: 266 GDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVA 321
G++ + G +A G + + T+L+D Y K G + A + K M + +V
Sbjct: 505 GNIEEAVKLVG-EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 322 WNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLE 380
+N ++ G +HGM + + M+ + + P+A TF +L+ ++ ++D+
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 381 SVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM 415
S + P+ + Y +V +A +++EA L ++M
Sbjct: 624 S-RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 174/409 (42%), Gaps = 68/409 (16%)
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEI----EVPSVVSWTVVLDGVVK-WEGVESG 204
+G RV + + V FGLL EAR+VF ++ V SV S V L + K +
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 230
Query: 205 RVVFDGMPERNEVAWTV----MIVGYVGN-GFTKEAFWLLKEMVFGCGFELNCVTLCSVL 259
+VF PE V W V +++ +V G KEA LL M G+ + ++ +V+
Sbjct: 231 IIVFREFPEVG-VCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPDVISYSTVV 288
Query: 260 SACSQSGDV-CVGRWVHGFAVKAM---GWDLGVMVG------------------------ 291
+ + G++ V + + K + + G ++G
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 292 ------TSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHG----MGKA 337
T+L+D + K G I A F M R +V+ + A++ G G GK
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 338 VVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI--RPEIEHYACM 395
+MF +E PD+VTF L++ +G ++ FR + + P + Y +
Sbjct: 409 FHEMFCKGLE---PDSVTFTELINGYCKAGHMKDA---FRVHNHMIQAGCSPNVVTYTTL 462
Query: 396 VDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
+D L + G L+ A L+ +M ++PN S++ G ++ A K+V E E
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAG 521
Query: 453 LN--TEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDG 499
LN T + L + Y SG+++KA + + +G++ ++ ++G
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 146/335 (43%), Gaps = 16/335 (4%)
Query: 94 LIRRCPPLESLQLFIEMRQLGLSIDXXXXXXXXXXXXRLGDPNVGPQVHSGVVKFGFGKC 153
L R C E+ + F EM + G+ D + GD + +
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 154 TRVCNAVMDLYVKFGLLGEARKVFGEIEV----PSVVSWTVVLDGVVKWEGVESGRVVFD 209
A++ + + G + EA K+F E+ P V++T +++G K ++ V +
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 210 GMPER----NEVAWTVMIVGYVGNGFTKEAFWLLKEMVFGCGFELNCVTLCSVLSACSQS 265
M + N V +T +I G G A LL EM + G + N T S+++ +S
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKS 504
Query: 266 GDVCVGRWVHGFAVKAMGWDLGVMVGTSLVDMYAKCGRISIALVVFKNMSRR----NVVA 321
G++ + G +A G + + T+L+D Y K G + A + K M + +V
Sbjct: 505 GNIEEAVKLVG-EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 322 WNAVLGGLAMHGMGKAVVDMFPHMVEE-VKPDAVTFMALLSACSHSGLVEQGRQYFRDLE 380
+N ++ G +HGM + + M+ + + P+A TF +L+ ++ ++D+
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 381 SVYEIRPEIEHYACMVDLLGRAGHLEEAELLVKKM 415
S + P+ + Y +V +A +++EA L ++M
Sbjct: 624 S-RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 174/409 (42%), Gaps = 68/409 (16%)
Query: 150 FGKCTRVCNAVMDLYVKFGLLGEARKVFGEI----EVPSVVSWTVVLDGVVK-WEGVESG 204
+G RV + + V FGLL EAR+VF ++ V SV S V L + K +
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 230
Query: 205 RVVFDGMPERNEVAWTV----MIVGYVGN-GFTKEAFWLLKEMVFGCGFELNCVTLCSVL 259
+VF PE V W V +++ +V G KEA LL M G+ + ++ +V+
Sbjct: 231 IIVFREFPEVG-VCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK-GYTPDVISYSTVV 288
Query: 260 SACSQSGDV-CVGRWVHGFAVKAM---GWDLGVMVG------------------------ 291
+ + G++ V + + K + + G ++G
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 292 ------TSLVDMYAKCGRISIALVVFKNMSRR----NVVAWNAVLGGLAMHG----MGKA 337
T+L+D + K G I A F M R +V+ + A++ G G GK
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 338 VVDMFPHMVEEVKPDAVTFMALLSACSHSGLVEQGRQYFRDLESVYEI--RPEIEHYACM 395
+MF +E PD+VTF L++ +G ++ FR + + P + Y +
Sbjct: 409 FHEMFCKGLE---PDSVTFTELINGYCKAGHMKDA---FRVHNHMIQAGCSPNVVTYTTL 462
Query: 396 VDLLGRAGHLEEAELLVKKM---PIRPNEVVLGSLLGSCYAHGKLQLAEKIVRELVEMDP 452
+D L + G L+ A L+ +M ++PN S++ G ++ A K+V E E
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAG 521
Query: 453 LN--TEYHILLSNMYALSGKVEKANSFRRVLKKRGIRKVPGMSSIYVDG 499
LN T + L + Y SG+++KA + + +G++ ++ ++G
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570