Miyakogusa Predicted Gene
- Lj2g3v1068320.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1068320.2 Non Chatacterized Hit- tr|I3SEB5|I3SEB5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.47,0,RETICULON-RELATED (PLANT),NULL; RETICULON,Reticulon;
seg,NULL; Reticulon,Reticulon,CUFF.36096.2
(189 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10915.6 | Symbols: | Reticulon family protein | chr3:341610... 232 1e-61
AT3G10915.3 | Symbols: | Reticulon family protein | chr3:341610... 231 2e-61
AT3G10915.2 | Symbols: | Reticulon family protein | chr3:341610... 231 2e-61
AT3G10915.4 | Symbols: | Reticulon family protein | chr3:341610... 227 4e-60
AT3G10915.5 | Symbols: | Reticulon family protein | chr3:341610... 224 2e-59
AT3G10915.1 | Symbols: | Reticulon family protein | chr3:341657... 140 4e-34
AT3G61560.1 | Symbols: | Reticulon family protein | chr3:227779... 117 5e-27
AT2G46170.1 | Symbols: | Reticulon family protein | chr2:189654... 111 3e-25
AT4G11220.1 | Symbols: BTI2, RTNLB2 | VIRB2-interacting protein ... 110 6e-25
AT4G23630.1 | Symbols: BTI1, RTNLB1 | VIRB2-interacting protein ... 109 9e-25
AT2G15280.1 | Symbols: | Reticulon family protein | chr2:664019... 108 2e-24
AT3G18260.1 | Symbols: | Reticulon family protein | chr3:626032... 108 3e-24
AT5G41600.1 | Symbols: BTI3, RTNLB4 | VIRB2-interacting protein ... 103 6e-23
AT3G54120.1 | Symbols: | Reticulon family protein | chr3:200412... 102 1e-22
AT1G64090.1 | Symbols: RTNLB3 | Reticulan like protein B3 | chr1... 101 3e-22
AT1G64090.2 | Symbols: RTNLB3 | Reticulan like protein B3 | chr1... 101 3e-22
AT3G10260.2 | Symbols: | Reticulon family protein | chr3:317141... 100 6e-22
AT3G10260.1 | Symbols: | Reticulon family protein | chr3:317141... 100 6e-22
AT3G10260.3 | Symbols: | Reticulon family protein | chr3:317141... 100 6e-22
AT3G19460.1 | Symbols: | Reticulon family protein | chr3:674760... 90 9e-19
AT4G01230.1 | Symbols: | Reticulon family protein | chr4:516264... 84 4e-17
AT2G23640.1 | Symbols: RTNLB13 | Reticulan like protein B13 | ch... 83 1e-16
AT3G19460.2 | Symbols: | Reticulon family protein | chr3:674791... 79 2e-15
AT1G68230.2 | Symbols: | Reticulon family protein | chr1:255721... 67 5e-12
AT1G68230.1 | Symbols: | Reticulon family protein | chr1:255721... 65 3e-11
AT2G15280.2 | Symbols: | Reticulon family protein | chr2:664019... 58 5e-09
AT2G46170.2 | Symbols: | Reticulon family protein | chr2:189654... 57 9e-09
>AT3G10915.6 | Symbols: | Reticulon family protein |
chr3:3416101-3417497 REVERSE LENGTH=194
Length = 194
Score = 232 bits (591), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 140/176 (79%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD++LW+R +SLGVI+++TVAW++ E++GLPFL++ SD HA +AFRNR
Sbjct: 10 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 69
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
Q +LPELV+SEEMVN+ AASFR+K+N++L++AHD+T+G DFR+FFKVV+CLWLLS IGS
Sbjct: 70 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGS 129
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
Y S TL YIG+++ +TIPALY KY + VDKCCG +H + S HY+IVDE+V +RL
Sbjct: 130 YISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLS 185
>AT3G10915.3 | Symbols: | Reticulon family protein |
chr3:3416101-3417058 REVERSE LENGTH=193
Length = 193
Score = 231 bits (590), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 140/176 (79%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD++LW+R +SLGVI+++TVAW++ E++GLPFL++ SD HA +AFRNR
Sbjct: 9 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 68
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
Q +LPELV+SEEMVN+ AASFR+K+N++L++AHD+T+G DFR+FFKVV+CLWLLS IGS
Sbjct: 69 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGS 128
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
Y S TL YIG+++ +TIPALY KY + VDKCCG +H + S HY+IVDE+V +RL
Sbjct: 129 YISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLS 184
>AT3G10915.2 | Symbols: | Reticulon family protein |
chr3:3416101-3417497 REVERSE LENGTH=226
Length = 226
Score = 231 bits (589), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 140/176 (79%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD++LW+R +SLGVI+++TVAW++ E++GLPFL++ SD HA +AFRNR
Sbjct: 42 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 101
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
Q +LPELV+SEEMVN+ AASFR+K+N++L++AHD+T+G DFR+FFKVV+CLWLLS IGS
Sbjct: 102 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGS 161
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
Y S TL YIG+++ +TIPALY KY + VDKCCG +H + S HY+IVDE+V +RL
Sbjct: 162 YISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLS 217
>AT3G10915.4 | Symbols: | Reticulon family protein |
chr3:3416101-3417497 REVERSE LENGTH=227
Length = 227
Score = 227 bits (578), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD++LW+R +SLGVI+++TVAW++ E++GLPFL++ SD HA +AFRNR
Sbjct: 42 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 101
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFK-VVVCLWLLSVIG 132
Q +LPELV+SEEMVN+ AASFR+K+N++L++AHD+T+G DFR+FFK VV+CLWLLS IG
Sbjct: 102 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 161
Query: 133 SYFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
SY S TL YIG+++ +TIPALY KY + VDKCCG +H + S HY+IVDE+V +RL
Sbjct: 162 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLS 218
>AT3G10915.5 | Symbols: | Reticulon family protein |
chr3:3416101-3417497 REVERSE LENGTH=249
Length = 249
Score = 224 bits (572), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD++LW+R +SLGVI+++TVAW++ E++GLPFL++ SD HA +AFRNR
Sbjct: 64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFK-VVVCLWLLSVIG 132
Q +LPELV+SEEMVN+ AASFR+K+N++L++AHD+T+G DFR+FFK VV+CLWLLS IG
Sbjct: 124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183
Query: 133 SYFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
SY S TL YIG+++ +TIPALY KY + VDKCCG +H + S HY+IVDE+V +RL
Sbjct: 184 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLS 240
>AT3G10915.1 | Symbols: | Reticulon family protein |
chr3:3416573-3417497 REVERSE LENGTH=162
Length = 162
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 88/109 (80%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD++LW+R +SLGVI+++TVAW++ E++GLPFL++ SD HA +AFRNR
Sbjct: 42 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 101
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVV 122
Q +LPELV+SEEMVN+ AASFR+K+N++L++AHD+T+G DFR+FFKV+
Sbjct: 102 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVM 150
>AT3G61560.1 | Symbols: | Reticulon family protein |
chr3:22777918-22779171 FORWARD LENGTH=253
Length = 253
Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
ADV LW+ +S V+ VAT W+L E FL++ +N AF N+
Sbjct: 69 ADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNK 128
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
P +PE+ + EE + ++ R ++N +I I +G+D + F VV LW++SV+G+
Sbjct: 129 TPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGN 188
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
+F+F TL YI +++ T+P LY K+ + VD + KHY + DE V ++LP
Sbjct: 189 WFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLP 244
>AT2G46170.1 | Symbols: | Reticulon family protein |
chr2:18965410-18966940 FORWARD LENGTH=255
Length = 255
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
ADV LW+ +S V+ VAT W+L E L++ +N N+
Sbjct: 69 ADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINK 128
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
+P +PE+ V EE VA+S R ++N +I I +G+D + F VVV LW++SV+G+
Sbjct: 129 TSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGN 188
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
+F+F TL YI +++ T+P LY K+ + VD + K Y + DE V +++P
Sbjct: 189 WFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIP 244
>AT4G11220.1 | Symbols: BTI2, RTNLB2 | VIRB2-interacting protein 2 |
chr4:6838176-6839578 REVERSE LENGTH=271
Length = 271
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD+ +WK +S GV ATVAW+L E LT+ +N F ++
Sbjct: 86 ADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHK 145
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
P +PE+ + EE + +A+ R++IN + +I G+D + F + LW+LS++G
Sbjct: 146 SPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGG 205
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
+SF TLAYI +++ T+P Y KY + VD + K Y ++D VF+++P
Sbjct: 206 CYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIP 261
>AT4G23630.1 | Symbols: BTI1, RTNLB1 | VIRB2-interacting protein 1 |
chr4:12318070-12319574 FORWARD LENGTH=275
Length = 275
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD+ +WK +S GV+ AT AW++ E LT+ +N F N+
Sbjct: 90 ADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINK 149
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
P +PE+ + EE + +A+ R++IN +I G+D + F + LW+LS++G
Sbjct: 150 SPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGG 209
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
F+F TLAYI +++ T+P Y KY + VD + K Y ++DE V +++P
Sbjct: 210 CFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIP 265
>AT2G15280.1 | Symbols: | Reticulon family protein |
chr2:6640191-6641414 FORWARD LENGTH=201
Length = 201
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 1 MSESDTQ-VPTAFVADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXX 59
M ES Q + VAD+I+WK ++ T+ W L E G F +
Sbjct: 1 MEESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVV 60
Query: 60 XXXXHANYAAFRNRQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFF 119
A A NR P LP L ++EE V VA + RV IN VL +A +I +G++ + F
Sbjct: 61 ILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLF 120
Query: 120 KVVVCLWLLSVIGSYFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRI 179
+V V LW +S +G++ +F T+ Y+G ++ + IP LY +Y + +D+ + H YR
Sbjct: 121 RVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRK 180
Query: 180 VDESVFNRL 188
+DE + ++
Sbjct: 181 IDERLLQKI 189
>AT3G18260.1 | Symbols: | Reticulon family protein |
chr3:6260328-6261504 REVERSE LENGTH=225
Length = 225
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 96/177 (54%)
Query: 13 VADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRN 72
VAD++LW+ ++ +++ ++ W L+E F+T+ + + F N
Sbjct: 39 VADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLN 98
Query: 73 RQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIG 132
+ P +PE+V+ E +A SF V+ N +L D+ G+D +FF + L+++S+IG
Sbjct: 99 WERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIG 158
Query: 133 SYFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
+YF+F L +IG + M T+P +Y Y + VD G L + K Y+ VD +V +++P
Sbjct: 159 TYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIP 215
>AT5G41600.1 | Symbols: BTI3, RTNLB4 | VIRB2-interacting protein 3 |
chr5:16636230-16637472 FORWARD LENGTH=257
Length = 257
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD+ LW+ VS GV+ T +W+L E L +N F ++
Sbjct: 69 ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHK 128
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
P +PE+ + E+ + + + R++IN L + +I GKD + F V+ LW+LS+IGS
Sbjct: 129 STPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGS 188
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRL 188
++F TL Y ++++ TIP LY KY + VD + K Y ++DE V ++
Sbjct: 189 CYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKV 243
>AT3G54120.1 | Symbols: | Reticulon family protein |
chr3:20041269-20042133 REVERSE LENGTH=203
Length = 203
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%)
Query: 11 AFVADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAF 70
VADV+LW++ VS+G++ V +W++ E T+ S + A+
Sbjct: 22 GIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASI 81
Query: 71 RNRQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSV 130
NR +P LPE +SE M + R+ +N +L ++HDI + +D ++ KV V L+LLS+
Sbjct: 82 LNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSL 141
Query: 131 IGSYFSFFTLAYIGSLMMITIPALYRKYGNYV 162
IGS F TL + L+++T+PA Y +Y +Y+
Sbjct: 142 IGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>AT1G64090.1 | Symbols: RTNLB3 | Reticulan like protein B3 |
chr1:23789395-23790669 FORWARD LENGTH=255
Length = 255
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD+ LW+ VS GV+ ATV+WIL E LT+ ++ + F ++
Sbjct: 65 ADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHK 124
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
+PE+ + E++V +A+ R++IN + DI G+D + F V+ LW+LS +GS
Sbjct: 125 SPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGS 184
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRL 188
+F TL YI ++++ TIP LY KY + VD + K Y D V +++
Sbjct: 185 SCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239
>AT1G64090.2 | Symbols: RTNLB3 | Reticulan like protein B3 |
chr1:23789395-23790669 FORWARD LENGTH=271
Length = 271
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
AD+ LW+ VS GV+ ATV+WIL E LT+ ++ + F ++
Sbjct: 81 ADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHK 140
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
+PE+ + E++V +A+ R++IN + DI G+D + F V+ LW+LS +GS
Sbjct: 141 SPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGS 200
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRL 188
+F TL YI ++++ TIP LY KY + VD + K Y D V +++
Sbjct: 201 SCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 255
>AT3G10260.2 | Symbols: | Reticulon family protein |
chr3:3171413-3172508 REVERSE LENGTH=247
Length = 247
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 5 DTQVPTAFV------ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXX 58
D Q P V ADV+LW+ +S V++ AT W+L EW FL++
Sbjct: 47 DRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGM 106
Query: 59 XXXXXHANYAAFRNRQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVF 118
+N + F NR +P LV+ ++ V + ++N LL D+ + + F
Sbjct: 107 IAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQF 166
Query: 119 FKVVVCLWLLSVIGSYFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYR 178
V+ LW+ +++GS +F T+ YIG + T+P LY +Y + VD + +F HY+
Sbjct: 167 LMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYK 226
Query: 179 IVDESVFNRLP 189
+D +R+P
Sbjct: 227 KLDTGFLSRIP 237
>AT3G10260.1 | Symbols: | Reticulon family protein |
chr3:3171413-3172508 REVERSE LENGTH=247
Length = 247
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 5 DTQVPTAFV------ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXX 58
D Q P V ADV+LW+ +S V++ AT W+L EW FL++
Sbjct: 47 DRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGM 106
Query: 59 XXXXXHANYAAFRNRQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVF 118
+N + F NR +P LV+ ++ V + ++N LL D+ + + F
Sbjct: 107 IAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQF 166
Query: 119 FKVVVCLWLLSVIGSYFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYR 178
V+ LW+ +++GS +F T+ YIG + T+P LY +Y + VD + +F HY+
Sbjct: 167 LMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYK 226
Query: 179 IVDESVFNRLP 189
+D +R+P
Sbjct: 227 KLDTGFLSRIP 237
>AT3G10260.3 | Symbols: | Reticulon family protein |
chr3:3171413-3172568 REVERSE LENGTH=267
Length = 267
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 5 DTQVPTAFV------ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXX 58
D Q P V ADV+LW+ +S V++ AT W+L EW FL++
Sbjct: 67 DRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGM 126
Query: 59 XXXXXHANYAAFRNRQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVF 118
+N + F NR +P LV+ ++ V + ++N LL D+ + + F
Sbjct: 127 IAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQF 186
Query: 119 FKVVVCLWLLSVIGSYFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYR 178
V+ LW+ +++GS +F T+ YIG + T+P LY +Y + VD + +F HY+
Sbjct: 187 LMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYK 246
Query: 179 IVDESVFNRLP 189
+D +R+P
Sbjct: 247 KLDTGFLSRIP 257
>AT3G19460.1 | Symbols: | Reticulon family protein |
chr3:6747600-6748904 FORWARD LENGTH=200
Length = 200
Score = 89.7 bits (221), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%)
Query: 13 VADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRN 72
VAD++LW+ ++ +++ +T W L E G L+ S+ A A N
Sbjct: 22 VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLN 81
Query: 73 RQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIG 132
R P +P + + EE N A RV IN VL IA DITI ++ +V + LW +S +G
Sbjct: 82 RPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVG 141
Query: 133 SYFSFFTLAYIGSLMMITIPALYRKYGNYVDK 164
+ + TL YIG L+ ++ P +Y KY +++D+
Sbjct: 142 TLINSLTLVYIGVLLSLSFPIVYEKYQDHIDE 173
>AT4G01230.1 | Symbols: | Reticulon family protein |
chr4:516264-517408 REVERSE LENGTH=242
Length = 242
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
ADV+LW+ V+LG++ TV W+L + G LT +N N+
Sbjct: 69 ADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNAL---NK 125
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIGS 133
+ ++ + E+ + A++ ++N I + +D + F V+ LWL+SVIG+
Sbjct: 126 SPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGN 185
Query: 134 YFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFNRLP 189
+FSF +L YI +++ T+P LY KY + +D + KHY++ + +++P
Sbjct: 186 WFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLSKIP 241
>AT2G23640.1 | Symbols: RTNLB13 | Reticulan like protein B13 |
chr2:10057554-10059042 FORWARD LENGTH=206
Length = 206
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
Query: 1 MSESDTQVPTA---FVADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXX 57
M+ T+ PT V D+ LW+R ++ +LV+T WILL + G +TI S
Sbjct: 1 MANDVTKDPTPKSDIVEDIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAV 60
Query: 58 XXXXXXHANYAAFRNRQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRV 117
+ ++ P L L VSEE V S R+ + ++ + ++ V
Sbjct: 61 VSMIFLWGSLLRLLSKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFV 120
Query: 118 FFKVVVCLWLLSVIGSYFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHY 177
F + V+ W+LS IG+ F T +IG +M +T+P L+ +YG+ + K G L + Y
Sbjct: 121 FARTVLGFWILSRIGNLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAY 180
Query: 178 RIVDESVFN 186
E +
Sbjct: 181 NTTHEKILE 189
>AT3G19460.2 | Symbols: | Reticulon family protein |
chr3:6747913-6748904 FORWARD LENGTH=218
Length = 218
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 34/186 (18%)
Query: 13 VADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRN 72
VAD++LW+ ++ +++ +T W L E G L+ S+ A A N
Sbjct: 6 VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLN 65
Query: 73 RQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKD----FRVFF--------- 119
R P +P + + EE N A RV IN VL IA DITI ++ +VFF
Sbjct: 66 RPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQTICC 125
Query: 120 ---------------------KVVVCLWLLSVIGSYFSFFTLAYIGSLMMITIPALYRKY 158
+V + LW +S +G+ + TL YIG L+ ++ P +Y KY
Sbjct: 126 IFLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKY 185
Query: 159 GNYVDK 164
+++D+
Sbjct: 186 QDHIDE 191
>AT1G68230.2 | Symbols: | Reticulon family protein |
chr1:25572185-25572921 FORWARD LENGTH=162
Length = 162
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLT-ICSDXXXXXXXXXX-XHANYAAFR 71
AD++ WK S ++ V T+ W L E PF+T +C + +
Sbjct: 32 ADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLI 91
Query: 72 NRQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVI 131
+ P++ +L +SE +N F KIN ++ +DI+ GKDFR+ F VV LW+LSV+
Sbjct: 92 QSKPPSINDLRISE---SNWRFLFN-KINWFIIKLYDISSGKDFRLLFLAVVSLWILSVV 147
Query: 132 GSYFSFFTLAYIGS 145
G+YFS TL YIG
Sbjct: 148 GNYFSSLTLLYIGE 161
>AT1G68230.1 | Symbols: | Reticulon family protein |
chr1:25572185-25572921 FORWARD LENGTH=151
Length = 151
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLT-ICSDXXXXXXXXXXXHANYAAFRN 72
AD++ WK S ++ V T+ W L E PF+T +C
Sbjct: 32 ADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIC--------- 82
Query: 73 RQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCLWLLSVIG 132
+ P++ +L +SE +N F KIN ++ +DI+ GKDFR+ F VV LW+LSV+G
Sbjct: 83 -KPPSINDLRISE---SNWRFLFN-KINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVG 137
Query: 133 SYFSFFTLAYIGS 145
+YFS TL YIG
Sbjct: 138 NYFSSLTLLYIGE 150
>AT2G15280.2 | Symbols: | Reticulon family protein |
chr2:6640191-6641414 FORWARD LENGTH=162
Length = 162
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 1 MSESDTQ-VPTAFVADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXX 59
M ES Q + VAD+I+WK ++ T+ W L E G F +
Sbjct: 1 MEESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVV 60
Query: 60 XXXXHANYAAFRNRQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFF 119
A A NR P LP L ++EE V VA + RV IN VL +A +I +G++ + F
Sbjct: 61 ILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLF 120
Query: 120 K 120
+
Sbjct: 121 R 121
>AT2G46170.2 | Symbols: | Reticulon family protein |
chr2:18965410-18966486 FORWARD LENGTH=187
Length = 187
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 14 ADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDXXXXXXXXXXXHANYAAFRNR 73
ADV LW+ +S V+ VAT W+L E L++ +N N+
Sbjct: 69 ADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINK 128
Query: 74 QAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKV 121
+P +PE+ V EE VA+S R ++N +I I +G+D + F V
Sbjct: 129 TSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMV 176