Miyakogusa Predicted Gene

Lj2g3v1058030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1058030.1 Non Chatacterized Hit- tr|I1LWJ9|I1LWJ9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,75.66,0,SUV3_C,Mitochondrial degradasome RNA helicase subunit,
C-terminal domain; Helicase_C,Helicase, C-ter,CUFF.36073.1
         (833 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G39840.1 | Symbols:  | ATP-dependent RNA helicase, mitochondr...  1003   0.0  
AT4G14790.1 | Symbols: ATSUV3, EDA15 | ATP-dependent RNA helicas...   419   e-117

>AT5G39840.1 | Symbols:  | ATP-dependent RNA helicase,
           mitochondrial, putative | chr5:15946769-15949186 FORWARD
           LENGTH=776
          Length = 776

 Score = 1003 bits (2592), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/699 (68%), Positives = 577/699 (82%), Gaps = 22/699 (3%)

Query: 113 LSDNVDAANDGNDE--CSNEIVESVE-FCNGSDSEEGGELVRESQEFVHVASRDPVELYR 169
           + ++V + +D  DE    NE+ +  E   N S   E  E+  E+   ++    DPVELYR
Sbjct: 90  IEESVGSESDDYDEEGLINELSDVDEGLLNDSVVAETDEIGSEAARALNDRYHDPVELYR 149

Query: 170 ELVSVEKGVKLNRYDVESLQEVFRCLAESGWASNQALAIYIGLSFFPTAVHKFRNFYLKK 229
           EL   E   KL   + +SL E+F   A+SGWA+NQALAIYIG SFFPTAV KFR+F+++K
Sbjct: 150 ELRGSEVRSKLQHSEWDSLHEIFGFFAQSGWAANQALAIYIGKSFFPTAVSKFRDFFIEK 209

Query: 230 CPADVTKYLLALGPSDAAVKFLFPIFVEFCLENFPDEIKRFRGMVESADLTKPHTWFPFA 289
           C  +V + L+ +GP+D AVKFLFP+FVEFC+E FPDEIKRF+ +V++ADLTKP TWFPFA
Sbjct: 210 CGIEVVQDLVRVGPTDVAVKFLFPVFVEFCIEEFPDEIKRFKSIVDTADLTKPATWFPFA 269

Query: 290 RAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAKGVYCSLLT 349
           RAMKRKI+YHCGPTNSGKTYNALQRFMEAK G+YCSPLRLLAMEVFDKVNA G+YCSLLT
Sbjct: 270 RAMKRKIVYHCGPTNSGKTYNALQRFMEAKNGLYCSPLRLLAMEVFDKVNALGIYCSLLT 329

Query: 350 GQERKLVPFSNHVACTVEMVSTQELYDVAIIDEIQMMADPYRGYAWTRALLGLKADEIHV 409
           GQE+K VPF+NHV+CTVEMVST ELY+VA++DEIQMMADP RG+AWT+ALLGLKADEIH+
Sbjct: 330 GQEKKYVPFANHVSCTVEMVSTDELYEVAVLDEIQMMADPSRGHAWTKALLGLKADEIHL 389

Query: 410 CGDPSVLDIVRKICQDTGDQLYEQHYERFKPLVVEAKTLLGNLQNIRSGDCVVAFSRREI 469
           CGDPSVLDIVRK+C DTGD+L E+HYERFKPLVVEAKTLLG L+N++SGDCVVAFSRREI
Sbjct: 390 CGDPSVLDIVRKMCADTGDELVEEHYERFKPLVVEAKTLLGELKNVKSGDCVVAFSRREI 449

Query: 470 FEVKLAIEKQTKHRCCVIYGALPPETRRQQANLFNDQNNEYDVLVASDAVGMGLNLNIRR 529
           FEVK+AIEK T HRCCVIYGALPPETRRQQA LFNDQ NEYDVLVASDAVGMGLNLNIRR
Sbjct: 450 FEVKMAIEKHTNHRCCVIYGALPPETRRQQAKLFNDQENEYDVLVASDAVGMGLNLNIRR 509

Query: 530 VIFNSLSKYNGDKMVHVPASQVKQIAGRAGRRGCLYPDGLATTLHIDDMDYLIECLKQPF 589
           V+F SL+KYNGDK+V V ASQVKQIAGRAGRRG  YPDGL TTLH++D++YLIECL+QPF
Sbjct: 510 VVFYSLNKYNGDKIVPVAASQVKQIAGRAGRRGSRYPDGLTTTLHLEDLNYLIECLQQPF 569

Query: 590 DNVKKVGLFPFYEQLELFAGQLPNMTFSQLLEKFGENCRLDGSYYLCRHDHIKKIANMLE 649
           D V KVGLFPF+EQ+ELFA Q+P+M FS LLE FG++CRLDGSY+LCRHDH+KK+ANMLE
Sbjct: 570 DEVTKVGLFPFFEQIELFAAQVPDMAFSNLLEHFGKHCRLDGSYFLCRHDHVKKVANMLE 629

Query: 650 KIQGLSLEDRFNFCFAPVNVRDPKAMYHLLRFATKFGQKLPVSIAMGMPTCSARNDSELL 709
           K++GLSLEDRFNFCFAPVN+R+P+AM++L RFA+ + Q +PV++AMG+P  SA++D++LL
Sbjct: 630 KVEGLSLEDRFNFCFAPVNIRNPRAMHNLYRFASSYSQNMPVNVAMGIPKSSAKSDAQLL 689

Query: 710 DLETRHQVLSMYLWLSNHFDEETFPYVKKAETMASDIADLLAQSLIKANWKPESRNKGKP 769
           DLE+RHQ+LSMYLWLSN F EE FP+V+K E MA++IA+LL +SL KA+WK ES+     
Sbjct: 690 DLESRHQILSMYLWLSNQF-EENFPFVEKVEAMATNIAELLGESLSKASWKMESK----- 743

Query: 770 NTGRSDVQTESRSKGVLKTGKSEEQTEPRSGAILKTEKK 808
                    E + KG +K  +  E    R  +++K  KK
Sbjct: 744 ---------EEKVKGQMKEDRGYE----RPASLIKLVKK 769


>AT4G14790.1 | Symbols: ATSUV3, EDA15 | ATP-dependent RNA helicase,
           mitochondrial (SUV3) | chr4:8496351-8499829 REVERSE
           LENGTH=571
          Length = 571

 Score =  419 bits (1078), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/485 (44%), Positives = 312/485 (64%), Gaps = 7/485 (1%)

Query: 277 ADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFD 336
            DLT PHTW+P AR  KRK+I H GPTNSGKTY+AL+   ++  G+YC PLRLLA EV  
Sbjct: 72  TDLTCPHTWYPIARKKKRKVILHVGPTNSGKTYSALKHLEQSSSGVYCGPLRLLAWEVAK 131

Query: 337 KVNAKGVYCSLLTGQERKLVPFSNHVACTVEMVSTQELYDVAIIDEIQMMADPYRGYAWT 396
           ++N   V C L+TGQE+ LV  + H A TVEM     +YD AIIDEIQM+    RG+A+T
Sbjct: 132 RLNKANVPCDLITGQEKDLVEGATHKAVTVEMADVTSVYDCAIIDEIQMVGCKQRGFAFT 191

Query: 397 RALLGLKADEIHVCGDPSVLDIVRKICQDTGDQLYEQHYERFKPLVVEAKTLLGNLQNIR 456
           RALLG+ ADE+H+CGDP+V+ +V  I + TGD +    YER  PL V  K  + ++ +I+
Sbjct: 192 RALLGIAADELHLCGDPAVVPLVEDILKVTGDDVEVHTYERLSPL-VPLKVPVSSVSSIK 250

Query: 457 SGDCVVAFSRREIFEVKLAIEKQTKHRCCVIYGALPPETRRQQANLFNDQNNEYDVLVAS 516
           +GDC+V FSR++I+  K  IE+  KH C V+YG+LPPETR  QA  FND+ N++DVLVAS
Sbjct: 251 TGDCLVTFSRKDIYAYKKTIERAGKHLCSVVYGSLPPETRTAQATRFNDETNDFDVLVAS 310

Query: 517 DAVGMGLNLNIRRVIFNSLSKYNGDKMVHVPASQVKQIAGRAGRRGCLYPDGLATTLHID 576
           DA+GMGLNLNI R+IF++L KY+G +   +  S++KQIAGRAGR    +P G  T LH +
Sbjct: 311 DAIGMGLNLNISRIIFSTLQKYDGSETRDLTVSEIKQIAGRAGRFQSKFPIGEVTCLHKE 370

Query: 577 DMDYLIECLKQPFDNVKKVGLFPFYEQLELFAGQLPNMTFSQLLEKFGENCRLDGSYYLC 636
           D+  L   LK P   +++ GLFP ++ L  ++   P     Q+LE F EN +L  +Y++ 
Sbjct: 371 DLPLLHSSLKSPSPILERAGLFPTFDLLSGYSQAHPTHGLYQILEHFVENAKLSSNYFIS 430

Query: 637 RHDHIKKIANMLEKIQGLSLEDRFNFCFAPVNVRDPKAMYHLLRFATKFGQKLPVSIAMG 696
             + + K+A +++++  L L++++ F  +PV+V D  +   L +FA  F +   V +   
Sbjct: 431 NVEDMMKVAAIVDELP-LGLQEKYLFVVSPVDVNDEISGQGLAQFAQNFSKAGIVRLREI 489

Query: 697 MP---TCSARNDSELLDLETRHQVLSMYLWLSNHFDEETFPYVKKAETMASDIADLLAQS 753
           +        +  +EL +LE+ H+VL +Y+WLS    E++FP  + A +  S I +LL + 
Sbjct: 490 LAPDRVKVPKTPTELKELESIHKVLDLYVWLSLRL-EDSFPDREVAASQKS-ICNLLIEQ 547

Query: 754 LIKAN 758
            ++ N
Sbjct: 548 FLEGN 552