Miyakogusa Predicted Gene

Lj2g3v1034750.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1034750.3 Non Chatacterized Hit- tr|I1N635|I1N635_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.69,0,seg,NULL;
Q84JW0_ARATH_Q84JW0;,3-dehydroquinate synthase, prokaryotic-type;
DHQS,3-dehydroquinate sy,CUFF.36089.3
         (337 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G28760.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   479   e-135
AT3G28760.2 | Symbols:  | CONTAINS InterPro DOMAIN/s: 3-dehydroq...   478   e-135

>AT3G28760.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           chloroplast; EXPRESSED IN: 20 plant structures;
           EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
           DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type
           (InterPro:IPR002812); Has 390 Blast hits to 390 proteins
           in 131 species: Archae - 144; Bacteria - 105; Metazoa -
           0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes
           - 87 (source: NCBI BLink). | chr3:10793126-10795304
           REVERSE LENGTH=422
          Length = 422

 Score =  479 bits (1232), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/339 (67%), Positives = 283/339 (83%), Gaps = 3/339 (0%)

Query: 1   MTAAVERGWNTFLFSSHHQK-AHDWSSIAVICPLFVGEGEILDGQDKRVATVFDVSTXXX 59
           MT AVERGWNTF+FSS ++K +++WSSIA++  LF+ E +++DG    VA+VF+VST   
Sbjct: 83  MTVAVERGWNTFIFSSDNRKLSNEWSSIALMDTLFIEEKKVIDGTGNVVASVFEVSTPEE 142

Query: 60  XXXXXXXXXQAENIVVNLLDWQVIPAENIIAAFQSSGKKVIAISSNASEAQIFLEALEHG 119
                    Q ENIV++ LDW+ IPAEN++AA Q S K V A+S+  SEA++FLEALEHG
Sbjct: 143 LRSLNIENEQIENIVLDFLDWKSIPAENLVAALQGSEKTVFAVSNTPSEAKLFLEALEHG 202

Query: 120 LDGIVLKVEDVESILELKEYFDRRTEESNLLSLSKATVTHVQVAGMGDRACVDLCSLMKP 179
           L GI+LK EDV+++L+LKEYFD+R EES+ LSL++AT+T VQ+ GMGDR CVDLCSLM+P
Sbjct: 203 LGGIILKSEDVKAVLDLKEYFDKRNEESDTLSLTEATITRVQMVGMGDRVCVDLCSLMRP 262

Query: 180 GEGLLVGSFARGLFLVHSECMESNYIASRPFRVNAGPVHAYVAVPGGRTCYLSELKSGKE 239
           GEGLLVGSFARGLFLVHSEC+ESNYI SRPFRVNAGPVHAYVAVPGG+TCYLSEL++G+E
Sbjct: 263 GEGLLVGSFARGLFLVHSECLESNYIESRPFRVNAGPVHAYVAVPGGKTCYLSELRTGRE 322

Query: 240 VIVVDQKGRQRIAIVGRVKIESRPLVLVEAKIDSDDQ--TISILLQNAETVPLVCPQQGN 297
           VIVVDQKG+QR A+VGRVKIE RPL++VEAK+ + ++    SI+LQNAETV LV P Q N
Sbjct: 323 VIVVDQKGKQRTAVVGRVKIEKRPLIVVEAKLSTKEEETVYSIILQNAETVALVTPHQVN 382

Query: 298 ALSKTAIPVTSLKIGDEVLLRVQGGARHTGIEIQEFIVE 336
           +  +TA+PVTSLK GD+VL+R+QGGARHTGIEIQEFIVE
Sbjct: 383 SSGRTAVPVTSLKPGDQVLIRLQGGARHTGIEIQEFIVE 421


>AT3G28760.2 | Symbols:  | CONTAINS InterPro DOMAIN/s:
           3-dehydroquinate synthase, prokaryotic-type
           (InterPro:IPR002812); Has 35333 Blast hits to 34131
           proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr3:10793126-10795304 REVERSE LENGTH=444
          Length = 444

 Score =  478 bits (1230), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/339 (67%), Positives = 283/339 (83%), Gaps = 3/339 (0%)

Query: 1   MTAAVERGWNTFLFSSHHQK-AHDWSSIAVICPLFVGEGEILDGQDKRVATVFDVSTXXX 59
           MT AVERGWNTF+FSS ++K +++WSSIA++  LF+ E +++DG    VA+VF+VST   
Sbjct: 105 MTVAVERGWNTFIFSSDNRKLSNEWSSIALMDTLFIEEKKVIDGTGNVVASVFEVSTPEE 164

Query: 60  XXXXXXXXXQAENIVVNLLDWQVIPAENIIAAFQSSGKKVIAISSNASEAQIFLEALEHG 119
                    Q ENIV++ LDW+ IPAEN++AA Q S K V A+S+  SEA++FLEALEHG
Sbjct: 165 LRSLNIENEQIENIVLDFLDWKSIPAENLVAALQGSEKTVFAVSNTPSEAKLFLEALEHG 224

Query: 120 LDGIVLKVEDVESILELKEYFDRRTEESNLLSLSKATVTHVQVAGMGDRACVDLCSLMKP 179
           L GI+LK EDV+++L+LKEYFD+R EES+ LSL++AT+T VQ+ GMGDR CVDLCSLM+P
Sbjct: 225 LGGIILKSEDVKAVLDLKEYFDKRNEESDTLSLTEATITRVQMVGMGDRVCVDLCSLMRP 284

Query: 180 GEGLLVGSFARGLFLVHSECMESNYIASRPFRVNAGPVHAYVAVPGGRTCYLSELKSGKE 239
           GEGLLVGSFARGLFLVHSEC+ESNYI SRPFRVNAGPVHAYVAVPGG+TCYLSEL++G+E
Sbjct: 285 GEGLLVGSFARGLFLVHSECLESNYIESRPFRVNAGPVHAYVAVPGGKTCYLSELRTGRE 344

Query: 240 VIVVDQKGRQRIAIVGRVKIESRPLVLVEAKIDSDDQ--TISILLQNAETVPLVCPQQGN 297
           VIVVDQKG+QR A+VGRVKIE RPL++VEAK+ + ++    SI+LQNAETV LV P Q N
Sbjct: 345 VIVVDQKGKQRTAVVGRVKIEKRPLIVVEAKLSTKEEETVYSIILQNAETVALVTPHQVN 404

Query: 298 ALSKTAIPVTSLKIGDEVLLRVQGGARHTGIEIQEFIVE 336
           +  +TA+PVTSLK GD+VL+R+QGGARHTGIEIQEFIVE
Sbjct: 405 SSGRTAVPVTSLKPGDQVLIRLQGGARHTGIEIQEFIVE 443