Miyakogusa Predicted Gene

Lj2g3v1034670.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1034670.2 tr|H6C3G4|H6C3G4_EXODN F-box and WD-40
domain-containing protein CDC4 OS=Exophiala dermatitidis
(str,23.82,0.0000000000001,GPROTEINBRPT,G-protein beta WD-40 repeat;
seg,NULL; WD_REPEATS_1,WD40 repeat, conserved site; WD40
r,CUFF.36063.2
         (523 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867...    57   3e-08
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r...    53   7e-07
AT5G08390.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    51   2e-06
AT5G23430.2 | Symbols:  | Transducin/WD40 repeat-like superfamil...    50   4e-06
AT5G23430.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    50   4e-06
AT1G24530.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    49   7e-06

>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
           chr5:8677117-8682058 FORWARD LENGTH=669
          Length = 669

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 13/111 (11%)

Query: 182 NVLVTSSCDHSIRLW--RKGSCLRCLRGHNGPVLSLSNKLLGEGSSKVLASGGEDSTVRL 239
           N + T S D ++RLW  + G C+R   GH   VLSL+    G    + +ASG ED T+ +
Sbjct: 515 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDG----RYMASGDEDGTIMM 570

Query: 240 WSLGSSGKRGQHALKATFYGHEKGVNFLSVAGHKTSLLVSMSRDSKVKVWD 290
           W L ++             GH   V  LS +G + SLL S S D  VK+WD
Sbjct: 571 WDLSTA------RCITPLMGHNSCVWSLSYSG-EGSLLASGSADCTVKLWD 614


>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
           repeat family protein | chr5:5504541-5509266 REVERSE
           LENGTH=876
          Length = 876

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 129/321 (40%), Gaps = 71/321 (22%)

Query: 163 RLFSHNEMSSCRGETQGEQNVLVTSSCDHSIRLWRKG--SCLRCLRGHNGPVLSLSNKLL 220
           RL  +NE  +       E+  L  ++    +R++     SC   L GH   VLSL   + 
Sbjct: 353 RLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVS 412

Query: 221 GEGSSKVLASGGEDSTVRLWSLGSSGKRGQHALKATFYGHEKGVNFLSVAGHKTSLLVSM 280
             G+  ++ +G +D TVRLW+  S    G         GH   +  ++ A    S  VS 
Sbjct: 413 SSGNV-LIVTGSKDKTVRLWNATSKSCIGVGT------GHNGDILAVAFAKKSFSFFVSG 465

Query: 281 SRDSKVKVWDTXXXXXXXXXPCVGMTSFRGAPVNMKCHESLLYVAAGSSVTAVDLRTMQK 340
           S D  +KVW              G++     P+N+K           S V A D    + 
Sbjct: 466 SGDRTLKVWSLD-----------GISEDSEEPINLKTR---------SVVAAHD----KD 501

Query: 341 VITVAVDQSKLYSFDAFPSKSLICTGGYGR-AMLWDIRRNQESAKPD--PITELDGHDGP 397
           + +VAV +          + SL+CTG   R A +W +        PD   +  L GH   
Sbjct: 502 INSVAVAR----------NDSLVCTGSEDRTASIWRL--------PDLVHVVTLKGHKRR 543

Query: 398 VTMLHMDSYK--IVTGSAE-MVRVWGVDTGVQTMSLLSCLTQDYMGRSNF---DAMAIDG 451
           +  +   +    ++T S +  V++W +  G       SCL + + G ++     +   DG
Sbjct: 544 IFSVEFSTVDQCVMTASGDKTVKIWAISDG-------SCL-KTFEGHTSSVLRASFITDG 595

Query: 452 CRAITACYCEDRGLLRFWDFN 472
            + ++   C   GLL+ W+ N
Sbjct: 596 TQFVS---CGADGLLKLWNVN 613


>AT5G08390.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:2701448-2706910 FORWARD LENGTH=839
          Length = 839

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 33/237 (13%)

Query: 220 LGEGSSKVLASGGEDSTVRLWSLGSSGKRGQHALKATFYGHEKGVNFLSVAGHKTSLLVS 279
           +G  SS+VL +GGED  V LW++G       +A+  + YGH  G++ ++    +  L+ +
Sbjct: 24  IGRKSSRVLVTGGEDHKVNLWAIGK-----PNAI-LSLYGHSSGIDSVTFDASE-GLVAA 76

Query: 280 MSRDSKVKVWDTXXXXXXXXXPCVGMTSFRGAPVNMKCHESLLYVAAGSSVTAV---DLR 336
            +    +K+WD              +T  R   V++  H    + A+GS  T +   D+R
Sbjct: 77  GAASGTIKLWDLEEAKVVRT-----LTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIR 131

Query: 337 TMQKVITVAVDQSKLYSFDAFPSKSLICTGGYGRAM-LWDIRRNQESAKPDPITELDGHD 395
               + T       +      P    I +GG    + +WD+   +       + E   H+
Sbjct: 132 KKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKL------LHEFKSHE 185

Query: 396 GPVTML--HMDSYKIVTGSAE-MVRVWGVDT-------GVQTMSLLSCLTQDYMGRS 442
           G +  L  H   + + TGSA+  V+ W ++T       G +T   + CLT +  G+S
Sbjct: 186 GKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTG-VRCLTFNPDGKS 241


>AT5G23430.2 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:7894073-7899862 REVERSE LENGTH=836
          Length = 836

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 25/211 (11%)

Query: 220 LGEGSSKVLASGGEDSTVRLWSLGSSGKRGQHALKATFYGHEKGVNFLSVAGHKTSLLVS 279
           +G  SS+VL +GGED  V LW++G       +A+  + YGH  G++ ++    +  L+ +
Sbjct: 24  IGRKSSRVLVTGGEDHKVNLWAIGKP-----NAI-LSLYGHSSGIDSVTFDASEV-LVAA 76

Query: 280 MSRDSKVKVWDTXXXXXXXXXPCVGMTSFRGAPVNMKCHESLLYVAAGSSVTAV---DLR 336
            +    +K+WD              +T  R   +++  H    + A+GS  T +   D+R
Sbjct: 77  GAASGTIKLWDLEEAKIVRT-----LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131

Query: 337 TMQKVITVAVDQSKLYSFDAFPSKSLICTGGYGRAM-LWDIRRNQESAKPDPITELDGHD 395
               + T       +      P    + +GG    + +WD+   +       +TE   H+
Sbjct: 132 KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL------LTEFKSHE 185

Query: 396 GPVTML--HMDSYKIVTGSAE-MVRVWGVDT 423
           G +  L  H   + + TGSA+  V+ W ++T
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKFWDLET 216


>AT5G23430.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:7894073-7899862 REVERSE LENGTH=837
          Length = 837

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 25/211 (11%)

Query: 220 LGEGSSKVLASGGEDSTVRLWSLGSSGKRGQHALKATFYGHEKGVNFLSVAGHKTSLLVS 279
           +G  SS+VL +GGED  V LW++G       +A+  + YGH  G++ ++    +  L+ +
Sbjct: 24  IGRKSSRVLVTGGEDHKVNLWAIGKP-----NAI-LSLYGHSSGIDSVTFDASEV-LVAA 76

Query: 280 MSRDSKVKVWDTXXXXXXXXXPCVGMTSFRGAPVNMKCHESLLYVAAGSSVTAV---DLR 336
            +    +K+WD              +T  R   +++  H    + A+GS  T +   D+R
Sbjct: 77  GAASGTIKLWDLEEAKIVRT-----LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131

Query: 337 TMQKVITVAVDQSKLYSFDAFPSKSLICTGGYGRAM-LWDIRRNQESAKPDPITELDGHD 395
               + T       +      P    + +GG    + +WD+   +       +TE   H+
Sbjct: 132 KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL------LTEFKSHE 185

Query: 396 GPVTML--HMDSYKIVTGSAE-MVRVWGVDT 423
           G +  L  H   + + TGSA+  V+ W ++T
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKFWDLET 216


>AT1G24530.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr1:8693287-8694543 FORWARD LENGTH=418
          Length = 418

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 32/151 (21%)

Query: 149 IQTLSDHKARITCMRLFSHNEMSSCRGETQGEQNVLVTSSCDHSIRLWRKG------SCL 202
           + TL  HK+ +  + L               + +VL + SCD SI +W +       +  
Sbjct: 273 VATLEKHKSAVNALAL-------------NDDGSVLFSGSCDRSILVWEREDTSNYMAVR 319

Query: 203 RCLRGHNGPVLSLSNKLLGEGSSKVLASGGEDSTVRLWSLGSSGKRGQHALKATFYGHEK 262
             LRGH+  +LSL N       S +L SG  D TVR+W  G       ++      GH K
Sbjct: 320 GALRGHDKAILSLFN------VSDLLLSGSADRTVRIWRRGPD---SSYSCLEVLSGHTK 370

Query: 263 GVNFLSVAGHK----TSLLVSMSRDSKVKVW 289
            V  L+    K       ++S S D +VK W
Sbjct: 371 PVKSLAAVREKELDDVVSIISGSLDGEVKCW 401