Miyakogusa Predicted Gene

Lj2g3v1034580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1034580.1 gi|36957182|gb|AY316738.1|.path1.1
         (276 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01280.1 | Symbols: VDAC1, ATVDAC1 | voltage dependent anion ...   432   e-121
AT5G15090.2 | Symbols: VDAC3 | voltage dependent anion channel 3...   399   e-112
AT5G15090.1 | Symbols: VDAC3, ATVDAC3 | voltage dependent anion ...   399   e-112
AT5G67500.1 | Symbols: VDAC2, ATVDAC2 | voltage dependent anion ...   284   5e-77
AT5G67500.2 | Symbols: VDAC2 | voltage dependent anion channel 2...   270   1e-72
AT5G57490.1 | Symbols: VDAC4, ATVDAC4 | voltage dependent anion ...   262   2e-70
AT3G49920.1 | Symbols: VDAC5, ATVDAC5 | voltage dependent anion ...   166   2e-41
AT3G49920.2 | Symbols: VDAC5 | voltage dependent anion channel 5...    96   3e-20
AT5G37610.1 | Symbols:  | Eukaryotic porin family protein | chr5...    87   1e-17

>AT3G01280.1 | Symbols: VDAC1, ATVDAC1 | voltage dependent anion
           channel 1 | chr3:85754-87612 FORWARD LENGTH=276
          Length = 276

 Score =  432 bits (1112), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/276 (75%), Positives = 242/276 (87%)

Query: 1   MAKGPGLYTDIGKRARDLLFKDYHSDQKFTITTYSPTGVAITSSGIKKGELFVADVNTQL 60
           M KGPGLYT+IGK+ARDLL+KD++SDQKF+ITT+SP GVAITS+G KKG+L + DV  Q 
Sbjct: 1   MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQS 60

Query: 61  KNKNITTDLKVDTDSNLFTTVTVDEPAPGLKAIFSFRVPDQRSGKVELQYLHDYAGISTS 120
           + KNITTDLKV TDS    T TVDE APGL++IFSF+VPDQ SGKVELQYLH+YAGISTS
Sbjct: 61  RRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTS 120

Query: 121 VGLTPNPIVNFSGVVGTNALAVGTDLSFDTKIGELTKFNAGLNFTKADLIASLTVNDKGD 180
           +GLT NP VNFSGV+G+N LAVGTD+SFDTK G  TK NAGL+FTK DLIASLTVNDKGD
Sbjct: 121 MGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGD 180

Query: 181 ALNASYYHIVNPLTNTAFGAEVTHRFSTNENTLTLGTQHALDPLTSVKARVNNLGKANAL 240
            LNASYYHIVNPL NTA GAEV+H+ S+ ++T+T+GTQH+LDPLTSVKARVN+ G A+AL
Sbjct: 181 LLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASAL 240

Query: 241 IQHEWRAKSFFTISGEVDTKAIEKSAKIGLGLALKP 276
           IQHEW+ KSFFTISGEVDTK+I+KSAK+GL LALKP
Sbjct: 241 IQHEWKPKSFFTISGEVDTKSIDKSAKVGLALALKP 276


>AT5G15090.2 | Symbols: VDAC3 | voltage dependent anion channel 3 |
           chr5:4889641-4891389 REVERSE LENGTH=274
          Length = 274

 Score =  399 bits (1026), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/276 (68%), Positives = 228/276 (82%), Gaps = 2/276 (0%)

Query: 1   MAKGPGLYTDIGKRARDLLFKDYHSDQKFTITTYSPTGVAITSSGIKKGELFVADVNTQL 60
           M KGPGLYT+IGK+ARDLL++DY  DQKF++TTYS TGVAIT++G  KG LF+ DV TQ+
Sbjct: 1   MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQV 60

Query: 61  KNKNITTDLKVDTDSNLFTTVTVDEPAPGLKAIFSFRVPDQRSGKVELQYLHDYAGISTS 120
           KN N T D+KV TDS+L TT+T DEPAPGLK I   ++PD +SGK E+QY HDYAGISTS
Sbjct: 61  KNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTS 120

Query: 121 VGLTPNPIVNFSGVVGTNALAVGTDLSFDTKIGELTKFNAGLNFTKADLIASLTVNDKGD 180
           VG T  PIVNFSGVVGTN L++GTD++++T+ G    FNAG NFTK DL ASL +NDKG+
Sbjct: 121 VGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGE 180

Query: 181 ALNASYYHIVNPLTNTAFGAEVTHRFSTNENTLTLGTQHALDPLTSVKARVNNLGKANAL 240
            LNASYY IV+P  +T  GAE++H F+T EN +T+GTQHALDPLT+VKARVNN G ANAL
Sbjct: 181 KLNASYYQIVSP--STVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANAL 238

Query: 241 IQHEWRAKSFFTISGEVDTKAIEKSAKIGLGLALKP 276
           IQHEWR KSFFT+SGEVD+KAI+KSAK+G+ LALKP
Sbjct: 239 IQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALALKP 274


>AT5G15090.1 | Symbols: VDAC3, ATVDAC3 | voltage dependent anion
           channel 3 | chr5:4889641-4891389 REVERSE LENGTH=274
          Length = 274

 Score =  399 bits (1026), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/276 (68%), Positives = 228/276 (82%), Gaps = 2/276 (0%)

Query: 1   MAKGPGLYTDIGKRARDLLFKDYHSDQKFTITTYSPTGVAITSSGIKKGELFVADVNTQL 60
           M KGPGLYT+IGK+ARDLL++DY  DQKF++TTYS TGVAIT++G  KG LF+ DV TQ+
Sbjct: 1   MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQV 60

Query: 61  KNKNITTDLKVDTDSNLFTTVTVDEPAPGLKAIFSFRVPDQRSGKVELQYLHDYAGISTS 120
           KN N T D+KV TDS+L TT+T DEPAPGLK I   ++PD +SGK E+QY HDYAGISTS
Sbjct: 61  KNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTS 120

Query: 121 VGLTPNPIVNFSGVVGTNALAVGTDLSFDTKIGELTKFNAGLNFTKADLIASLTVNDKGD 180
           VG T  PIVNFSGVVGTN L++GTD++++T+ G    FNAG NFTK DL ASL +NDKG+
Sbjct: 121 VGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGE 180

Query: 181 ALNASYYHIVNPLTNTAFGAEVTHRFSTNENTLTLGTQHALDPLTSVKARVNNLGKANAL 240
            LNASYY IV+P  +T  GAE++H F+T EN +T+GTQHALDPLT+VKARVNN G ANAL
Sbjct: 181 KLNASYYQIVSP--STVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANAL 238

Query: 241 IQHEWRAKSFFTISGEVDTKAIEKSAKIGLGLALKP 276
           IQHEWR KSFFT+SGEVD+KAI+KSAK+G+ LALKP
Sbjct: 239 IQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALALKP 274


>AT5G67500.1 | Symbols: VDAC2, ATVDAC2 | voltage dependent anion
           channel 2 | chr5:26935223-26937123 FORWARD LENGTH=276
          Length = 276

 Score =  284 bits (726), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 139/276 (50%), Positives = 195/276 (70%)

Query: 1   MAKGPGLYTDIGKRARDLLFKDYHSDQKFTITTYSPTGVAITSSGIKKGELFVADVNTQL 60
           M+KGPGL+TDIGK+A+DLL +DY+SDQKF+I+TYS +GVA+TS+ +KKG +  ADV TQ 
Sbjct: 1   MSKGPGLFTDIGKKAKDLLTRDYNSDQKFSISTYSASGVALTSTALKKGGVHAADVATQY 60

Query: 61  KNKNITTDLKVDTDSNLFTTVTVDEPAPGLKAIFSFRVPDQRSGKVELQYLHDYAGISTS 120
           K KN   D+K+DTDS++ TTVT+ E  P  KAI SF+VPD  S K+E+QY HD+A ++ +
Sbjct: 61  KYKNALFDVKIDTDSSVLTTVTLTEILPSTKAIASFKVPDYNSAKLEVQYFHDHATVTAA 120

Query: 121 VGLTPNPIVNFSGVVGTNALAVGTDLSFDTKIGELTKFNAGLNFTKADLIASLTVNDKGD 180
             L  NP+++ +  +G+  ++ G +  +DT     TK+NAG++ TK D   S+ + DKGD
Sbjct: 121 AALKQNPLIDITATLGSPVISFGAEAGYDTTSKTFTKYNAGISVTKPDACLSIILGDKGD 180

Query: 181 ALNASYYHIVNPLTNTAFGAEVTHRFSTNENTLTLGTQHALDPLTSVKARVNNLGKANAL 240
           +L ASY H  +    TA   EV  +FSTNENT+T+G  +A+D  T+VKA++NN G   AL
Sbjct: 181 SLKASYLHHFDEFKRTAAVGEVYRKFSTNENTITVGGLYAIDHSTAVKAKLNNHGTLGAL 240

Query: 241 IQHEWRAKSFFTISGEVDTKAIEKSAKIGLGLALKP 276
           +QHE   +S  T+S E+DTKA+EK  + GL LALKP
Sbjct: 241 LQHEVLPRSLVTVSSEIDTKALEKHPRFGLSLALKP 276


>AT5G67500.2 | Symbols: VDAC2 | voltage dependent anion channel 2 |
           chr5:26935223-26937123 FORWARD LENGTH=303
          Length = 303

 Score =  270 bits (689), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 139/303 (45%), Positives = 195/303 (64%), Gaps = 27/303 (8%)

Query: 1   MAKGPGLYTDIGKRARDLLFKDYHSDQKFTITTYSPTGV--------------------- 39
           M+KGPGL+TDIGK+A+DLL +DY+SDQKF+I+TYS +GV                     
Sbjct: 1   MSKGPGLFTDIGKKAKDLLTRDYNSDQKFSISTYSASGVGTERENEYQDDIYFCLRTRCL 60

Query: 40  ------AITSSGIKKGELFVADVNTQLKNKNITTDLKVDTDSNLFTTVTVDEPAPGLKAI 93
                 A+TS+ +KKG +  ADV TQ K KN   D+K+DTDS++ TTVT+ E  P  KAI
Sbjct: 61  IMSENEALTSTALKKGGVHAADVATQYKYKNALFDVKIDTDSSVLTTVTLTEILPSTKAI 120

Query: 94  FSFRVPDQRSGKVELQYLHDYAGISTSVGLTPNPIVNFSGVVGTNALAVGTDLSFDTKIG 153
            SF+VPD  S K+E+QY HD+A ++ +  L  NP+++ +  +G+  ++ G +  +DT   
Sbjct: 121 ASFKVPDYNSAKLEVQYFHDHATVTAAAALKQNPLIDITATLGSPVISFGAEAGYDTTSK 180

Query: 154 ELTKFNAGLNFTKADLIASLTVNDKGDALNASYYHIVNPLTNTAFGAEVTHRFSTNENTL 213
             TK+NAG++ TK D   S+ + DKGD+L ASY H  +    TA   EV  +FSTNENT+
Sbjct: 181 TFTKYNAGISVTKPDACLSIILGDKGDSLKASYLHHFDEFKRTAAVGEVYRKFSTNENTI 240

Query: 214 TLGTQHALDPLTSVKARVNNLGKANALIQHEWRAKSFFTISGEVDTKAIEKSAKIGLGLA 273
           T+G  +A+D  T+VKA++NN G   AL+QHE   +S  T+S E+DTKA+EK  + GL LA
Sbjct: 241 TVGGLYAIDHSTAVKAKLNNHGTLGALLQHEVLPRSLVTVSSEIDTKALEKHPRFGLSLA 300

Query: 274 LKP 276
           LKP
Sbjct: 301 LKP 303


>AT5G57490.1 | Symbols: VDAC4, ATVDAC4 | voltage dependent anion
           channel 4 | chr5:23283895-23285335 REVERSE LENGTH=274
          Length = 274

 Score =  262 bits (669), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 124/276 (44%), Positives = 183/276 (66%), Gaps = 2/276 (0%)

Query: 1   MAKGPGLYTDIGKRARDLLFKDYHSDQKFTITTYSPTGVAITSSGIKKGELFVADVNTQL 60
           M   P  + DIGK+A+DLL KDY  D KFT+T  S TG    ++G+KK + F  D++T  
Sbjct: 1   MGSSPAPFADIGKKAKDLLNKDYIFDHKFTLTMLSATGTEFVATGLKKDDFFFGDISTLY 60

Query: 61  KNKNITTDLKVDTDSNLFTTVTVDEPAPGLKAIFSFRVPDQRSGKVELQYLHDYAGISTS 120
           K +N   DLK+D+ S++ T VT+    P  KA+ SF++PD +SGK+++QY+H +A +++S
Sbjct: 61  KGQNTIVDLKIDSHSSVSTKVTLKNLLPSAKAVISFKIPDHKSGKLDVQYVHPHATLNSS 120

Query: 121 VGLTPNPIVNFSGVVGTNALAVGTDLSFDTKIGELTKFNAGLNFTKADLIASLTVNDKGD 180
           +GL P P+++ S  +G+  + +G ++SFDT    LTK+NAG+ F    + A+L + DKG+
Sbjct: 121 IGLNPTPLLDLSATIGSQNVCLGGEVSFDTASSSLTKYNAGIGFNNQGVSAALILEDKGE 180

Query: 181 ALNASYYHIVNPLTNTAFGAEVTHRFSTNENTLTLGTQHALDPLTSVKARVNNLGKANAL 240
           +L A+Y H VNP   T+FGAE+  RFS   N+ T+G+ H++D  T VK R +N GKA  +
Sbjct: 181 SLRATYVHTVNP--TTSFGAELIRRFSNYNNSFTVGSSHSVDQFTVVKTRFSNSGKAGMV 238

Query: 241 IQHEWRAKSFFTISGEVDTKAIEKSAKIGLGLALKP 276
           +Q EWR KS  T S E D+KA+  S K+GL LALKP
Sbjct: 239 VQREWRPKSHITFSAEYDSKAVTSSPKLGLALALKP 274


>AT3G49920.1 | Symbols: VDAC5, ATVDAC5 | voltage dependent anion
           channel 5 | chr3:18505836-18507699 REVERSE LENGTH=226
          Length = 226

 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/276 (39%), Positives = 152/276 (55%), Gaps = 50/276 (18%)

Query: 1   MAKGPGLYTDIGKRARDLLFKDYHSDQKFTITTYSPTGVAITSSGIKKGELFVADVNTQL 60
           M+KGPGL+ DIGK A+DLL +DY +DQKF+I+T S +GVA+TS+ +K G L  A+V TQ 
Sbjct: 1   MSKGPGLFADIGKYAKDLLTRDYSTDQKFSISTNSVSGVALTSTALKNGVLHAANVATQY 60

Query: 61  KNKNITTDLKVDTDSNLFTTVTVDEPAPGLKAIFSFRVPDQRSGKVELQYLHDYAGISTS 120
           K +            N F  V +D           F V         L Y          
Sbjct: 61  KYR------------NTFFDVKIDT---------DFNVK-------SLVY---------- 82

Query: 121 VGLTPNPIVNFSGVVGTNALAVGTDLSFDTKIGELTKFNAGLNFTKADLIASLTVNDKGD 180
                 P+  F  +   N L       +DT     TK+N G++ TK D   S+ + DKGD
Sbjct: 83  ------PMNKFVSI-DHNTLT-----GYDTTSRTFTKYNVGVSVTKPDQCVSIILGDKGD 130

Query: 181 ALNASYYHIVNPLTNTAFGAEVTHRFSTNENTLTLGTQHALDPLTSVKARVNNLGKANAL 240
           ++ ASY + ++  T +A   EV  + STNE T+T+G  +A+D LT+VKA++N+ GK  AL
Sbjct: 131 SIKASYVYYLDESTRSATVGEVIRKISTNETTVTVGGLYAVDHLTNVKAKLNSNGKFGAL 190

Query: 241 IQHEWRAKSFFTISGEVDTKAIEKSAKIGLGLALKP 276
           +QHE   KS  TISGE+DTK ++K  ++GL L+LKP
Sbjct: 191 LQHEGLPKSIVTISGEIDTKTLDKYPRLGLSLSLKP 226


>AT3G49920.2 | Symbols: VDAC5 | voltage dependent anion channel 5
          | chr3:18506364-18507699 REVERSE LENGTH=127
          Length = 127

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/82 (56%), Positives = 63/82 (76%)

Query: 1  MAKGPGLYTDIGKRARDLLFKDYHSDQKFTITTYSPTGVAITSSGIKKGELFVADVNTQL 60
          M+KGPGL+ DIGK A+DLL +DY +DQKF+I+T S +GVA+TS+ +K G L  A+V TQ 
Sbjct: 1  MSKGPGLFADIGKYAKDLLTRDYSTDQKFSISTNSVSGVALTSTALKNGVLHAANVATQY 60

Query: 61 KNKNITTDLKVDTDSNLFTTVT 82
          K +N   D+K+DTD N+ TT+T
Sbjct: 61 KYRNTFFDVKIDTDFNILTTIT 82


>AT5G37610.1 | Symbols:  | Eukaryotic porin family protein |
           chr5:14938121-14938612 FORWARD LENGTH=163
          Length = 163

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 4/148 (2%)

Query: 111 LHDYAGISTSVGLTPNPIVNFSGVVGTNALAVGTDLSFDTKIGELTKFNAGLNFTKADLI 170
           L + A IST VGL  NPI++FS V G +    G +L+ D     +TK N  L+    D  
Sbjct: 2   LSERARISTIVGLFANPILSFSAVFGNDFWRFGFELTLDLVNRIITKANTVLSLITEDTT 61

Query: 171 ASLTVNDKGDALNASYYHIVNPLTNTAFGAEVTHRFSTNENTLTLGTQHAL--DPLTSVK 228
            + +++ K     ASYY  ++  + T  GAE  +  S   N+ ++G +H    D L    
Sbjct: 62  TTFSIDKKASLFTASYYQRLH--SKTVCGAEAKYILSDKSNSFSIGKRHLFGDDDLIQAL 119

Query: 229 ARVNNLGKANALIQHEWRAKSFFTISGE 256
             V+N G    L QH W  KSFFTI+GE
Sbjct: 120 LSVSNGGSMRVLFQHHWTLKSFFTIAGE 147