Miyakogusa Predicted Gene

Lj2g3v1034430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1034430.1 Non Chatacterized Hit- tr|D7SR99|D7SR99_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.7,0.000000000000003,seg,NULL,CUFF.36053.1
         (139 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27925.1 | Symbols: DEGP1, Deg1 | DegP protease 1 | chr3:1036...    71   2e-13

>AT3G27925.1 | Symbols: DEGP1, Deg1 | DegP protease 1 |
           chr3:10366659-10368864 REVERSE LENGTH=439
          Length = 439

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 31/109 (28%)

Query: 41  TPKTCFNSILILCTSIALSFT------NADSAYAFVVTPPRKLQSDELAT---------- 84
           TP +      +LCTS+ALSF+        +SA AFVV+ P+KLQ+DELAT          
Sbjct: 72  TPFSAVKPFFLLCTSVALSFSLFAASPAVESASAFVVSTPKKLQTDELATVRLFQENTPS 131

Query: 85  VVYITNLAVKMRLRWM-------------CWRFLKEGNIVTNYHVIPGA 120
           VVYITNLAV+     +              W   K+G+IVTNYHVI GA
Sbjct: 132 VVYITNLAVRQDAFTLDVLEVPQGSGSGFVWD--KQGHIVTNYHVIRGA 178