Miyakogusa Predicted Gene

Lj2g3v1022790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1022790.1 Non Chatacterized Hit- tr|D8QYY2|D8QYY2_SELML
Putative uncharacterized protein OS=Selaginella
moelle,62.5,2e-18,MAT1,Cdk-activating kinase assembly factor MAT1,
centre; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY ,CUFF.36006.1
         (133 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30820.3 | Symbols:  | cyclin-dependent kinase-activating kin...    82   1e-16
AT4G30820.2 | Symbols:  | cyclin-dependent kinase-activating kin...    82   1e-16
AT4G30820.1 | Symbols:  | cyclin-dependent kinase-activating kin...    82   1e-16

>AT4G30820.3 | Symbols:  | cyclin-dependent kinase-activating
          kinase assembly factor-related / CDK-activating kinase
          assembly factor-related | chr4:15007144-15008378
          FORWARD LENGTH=178
          Length = 178

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 49/55 (89%)

Query: 8  FNKREDDFPSLREYNDYLEQVEDMTFNLIEGVDVAAIEAKIAKYQEENSEQIMVN 62
          +N+RE++FPSL++YNDYLE+VE M F+LI+G++V AIE KI +Y +EN+EQIM+N
Sbjct: 24 YNRREEEFPSLKDYNDYLEEVECMVFDLIDGINVEAIEQKIKRYSKENAEQIMIN 78


>AT4G30820.2 | Symbols:  | cyclin-dependent kinase-activating
          kinase assembly factor-related / CDK-activating kinase
          assembly factor-related | chr4:15007144-15008378
          FORWARD LENGTH=178
          Length = 178

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 49/55 (89%)

Query: 8  FNKREDDFPSLREYNDYLEQVEDMTFNLIEGVDVAAIEAKIAKYQEENSEQIMVN 62
          +N+RE++FPSL++YNDYLE+VE M F+LI+G++V AIE KI +Y +EN+EQIM+N
Sbjct: 24 YNRREEEFPSLKDYNDYLEEVECMVFDLIDGINVEAIEQKIKRYSKENAEQIMIN 78


>AT4G30820.1 | Symbols:  | cyclin-dependent kinase-activating
          kinase assembly factor-related / CDK-activating kinase
          assembly factor-related | chr4:15007144-15008378
          FORWARD LENGTH=178
          Length = 178

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 49/55 (89%)

Query: 8  FNKREDDFPSLREYNDYLEQVEDMTFNLIEGVDVAAIEAKIAKYQEENSEQIMVN 62
          +N+RE++FPSL++YNDYLE+VE M F+LI+G++V AIE KI +Y +EN+EQIM+N
Sbjct: 24 YNRREEEFPSLKDYNDYLEEVECMVFDLIDGINVEAIEQKIKRYSKENAEQIMIN 78