Miyakogusa Predicted Gene

Lj2g3v1022400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1022400.1 tr|Q2HTU0|Q2HTU0_MEDTR Endoglucanase OS=Medicago
truncatula GN=MTR_4g091610 PE=4 SV=1,44.44,0.000000000000004,
,CUFF.35975.1
         (128 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26130.1 | Symbols:  | Cellulase (glycosyl hydrolase family 5...    64   3e-11
AT5G16700.1 | Symbols:  | Glycosyl hydrolase superfamily protein...    57   3e-09
AT1G13130.1 | Symbols:  | Cellulase (glycosyl hydrolase family 5...    51   2e-07
AT3G26140.1 | Symbols:  | Cellulase (glycosyl hydrolase family 5...    46   5e-06
AT5G17500.1 | Symbols:  | Glycosyl hydrolase superfamily protein...    46   7e-06

>AT3G26130.1 | Symbols:  | Cellulase (glycosyl hydrolase family 5)
           protein | chr3:9553708-9555611 REVERSE LENGTH=551
          Length = 551

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 33  DVWTLQPLNRISAKSIEGLDFQTGFLTTGKDAAPLMFYEFGFDQKGSSEADNKFLTSLQT 92
           + W    LN+I  K  E +   +GFL   +   PL   EFG DQ+G++  DNKFL+    
Sbjct: 272 NTWEGDNLNKICGKETEKMMKMSGFLL--EKGIPLFVSEFGIDQRGNNANDNKFLSCFMA 329

Query: 93  YPVREDLDWGLWAFHGGYYL 112
                DLDW LW   G YY+
Sbjct: 330 LAADRDLDWSLWTLAGSYYI 349


>AT5G16700.1 | Symbols:  | Glycosyl hydrolase superfamily protein |
           chr5:5480763-5483045 FORWARD LENGTH=488
          Length = 488

 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 32  KDVWTLQPLNRISAKSIEGLDFQTGFLTTGKDAAPLMFYEFGFDQKGSSEADNKFLTSLQ 91
           +D W     N    K IE +    GFL  G+   PL+  EFG DQ+G   + N+++  L 
Sbjct: 274 RDSWRKHNSNDFCVKIIEKVTHNGGFLL-GR-GFPLILSEFGTDQRGGDMSGNRYMNCLV 331

Query: 92  TYPVREDLDWGLWAFHGGYYLTS 114
            +    DLDW +WA  G YYL +
Sbjct: 332 AWAAENDLDWAVWALTGDYYLRT 354


>AT1G13130.1 | Symbols:  | Cellulase (glycosyl hydrolase family 5)
           protein | chr1:4474726-4477820 FORWARD LENGTH=552
          Length = 552

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 27/47 (57%)

Query: 66  PLMFYEFGFDQKGSSEADNKFLTSLQTYPVREDLDWGLWAFHGGYYL 112
           PL   EFG D++G +  DN++   L  +    D+DW LWA  G YYL
Sbjct: 314 PLFLSEFGIDERGVNTNDNRYFGCLTGWAAENDVDWSLWALTGSYYL 360


>AT3G26140.1 | Symbols:  | Cellulase (glycosyl hydrolase family 5)
           protein | chr3:9559742-9563070 REVERSE LENGTH=508
          Length = 508

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 66  PLMFYEFGFDQKGSSEADNKFLTSLQTYPVREDLDWGLWAFHGGYYL 112
           P+   EFG D +G +  DN+++  +  +    D+DW +W   G YYL
Sbjct: 283 PVFLSEFGIDLRGKNVNDNRYIGCILGWAAENDVDWSIWTLQGSYYL 329


>AT5G17500.1 | Symbols:  | Glycosyl hydrolase superfamily protein |
           chr5:5767379-5769719 FORWARD LENGTH=526
          Length = 526

 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 66  PLMFYEFGFDQKGSSEADNKFLTSLQTYPVREDLDWGLWAFHGGYYL 112
           PL   EFG DQ+G     N+++  +  +   +DLDW +WA  G YY 
Sbjct: 308 PLFLSEFGTDQRGGDLEGNRYMNCMLAWAAEKDLDWAVWAVTGVYYF 354