Miyakogusa Predicted Gene
- Lj2g3v1021080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1021080.1 Non Chatacterized Hit- tr|I1N5X8|I1N5X8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,60,0.0000000002,YhbY-like,RNA-binding, CRM domain;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.35953.1
(467 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01370.1 | Symbols: ATCFM2, CFM2 | CRM family member 2 | chr3... 402 e-112
AT3G23070.1 | Symbols: ATCFM3A, CFM3A | CRM family member 3A | c... 296 3e-80
AT3G18390.1 | Symbols: EMB1865 | CRS1 / YhbY (CRM) domain-contai... 282 4e-76
AT5G16180.1 | Symbols: CRS1, ATCRS1 | ortholog of maize chloropl... 239 2e-63
AT4G14510.1 | Symbols: ATCFM3B, CFM3B | CRM family member 3B | c... 199 3e-51
AT4G29750.1 | Symbols: | CRS1 / YhbY (CRM) domain-containing pr... 186 2e-47
AT4G13070.1 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain p... 100 3e-21
AT2G28480.1 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain p... 98 1e-20
AT3G25440.1 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain p... 91 2e-18
AT3G25440.2 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain p... 91 2e-18
AT3G27550.1 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain p... 78 1e-14
AT2G20020.1 | Symbols: CAF1, ATCAF1 | RNA-binding CRS1 / YhbY (C... 51 1e-06
>AT3G01370.1 | Symbols: ATCFM2, CFM2 | CRM family member 2 |
chr3:139033-143477 FORWARD LENGTH=1011
Length = 1011
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/358 (57%), Positives = 258/358 (72%), Gaps = 12/358 (3%)
Query: 1 MTTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTNSEIMAEEI 60
MTT+RRL RP+P HFALGRNR LQGLA AI+KLWE+CE+ KIAVKRGVQNTNSE+MAEE+
Sbjct: 383 MTTIRRLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEEL 442
Query: 61 KHLTGGNLLARDREFIVFYRGKDFLPAAVSSAIEQRR-------NIGLYKLK-AENSLSV 112
K LTGG L++RD++FIV YRGKDFLP+AVSSAIE+RR N ++ K EN +
Sbjct: 443 KWLTGGTLISRDKDFIVLYRGKDFLPSAVSSAIEERRRQTMIMENSSVHGNKLTENEEEI 502
Query: 113 VPADSEGNGVTFQKDTEIFKKELLTKAKEANK----FKKSSIXXXXXXXXXXXXXXXXXX 168
P + + KD + + K+++ N +K+S+
Sbjct: 503 KPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSMALEKKANAEKVLAD 562
Query: 169 XXXXXSPQEQEIDKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYREL 228
SPQ +IDKEGIT +E+YMLRKIGLKM+PFLLLGRRGVFDGT+ENMHLHWKYREL
Sbjct: 563 LENRESPQLSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYREL 622
Query: 229 VKVICKEGSLEAVYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLL 288
VK+IC E S+EA ++VA+ LEAESGGILVAVE VSKGYAIIVYRGKNY RP LRPQTLL
Sbjct: 623 VKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLL 682
Query: 289 NKKLAMKRSIEAQRYESLKLHVLNLDKNINELKLQMVKDEANSKQMPETLRSDLVTDK 346
+K+ A+KRS+EAQR +SLKLHVL L NI EL Q+V+D A ++ + S+++ ++
Sbjct: 683 SKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNETWSDGESSNMMVEE 740
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 193 LRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYRELVKVICKEGSLEAVYQVAQTLEAES 252
LR +G+++ L +G+ G+ +G V +H W+ E+VK+ C++ S + + LE ++
Sbjct: 174 LRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKT 233
Query: 253 GGILVAVERVSKGYAIIVYRGKNYSRP 279
GG+++ G I++YRG NY P
Sbjct: 234 GGLVIW----RSGSKILLYRGVNYQYP 256
>AT3G23070.1 | Symbols: ATCFM3A, CFM3A | CRM family member 3A |
chr3:8203548-8207243 FORWARD LENGTH=881
Length = 881
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/367 (44%), Positives = 225/367 (61%), Gaps = 26/367 (7%)
Query: 2 TTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTNSEIMAEEIK 61
T LRRL+R IP HFALGR+R+LQGLA A+++LWE+ + KIA+KRGVQ+T SE MAE++K
Sbjct: 429 TALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLK 488
Query: 62 HLTGGNLLARDREFIVFYRGKDFLPAAVSSA-IEQRRNIGLYKLKAE------NSLSVVP 114
LTGG +L+R+++F+VFYRGK+FL V+ A +EQ R + + + E +S +VP
Sbjct: 489 KLTGGIMLSRNKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVP 548
Query: 115 ADSEGN--------GVTFQKDTEIFK-----------KELLTKAKEANKFKKSSIXXXXX 155
+ N G T + K K+ + + N +K
Sbjct: 549 STEPANKLVSAGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFA 608
Query: 156 XXXXXXXXXXXXXXXXXXSPQEQEIDKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGT 215
P EQ D E IT+EER+M RK+GLKM+ FLLLGRRGVFDGT
Sbjct: 609 ERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGT 668
Query: 216 VENMHLHWKYRELVKVICKEGSLEAVYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKN 275
VENMHLHWKYRELVK+I K + + V +VA LEAESGGILV++++V+KGYAIIVYRG++
Sbjct: 669 VENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQD 728
Query: 276 YSRPASLRPQTLLNKKLAMKRSIEAQRYESLKLHVLNLDKNINELKLQMVKDEANSKQMP 335
Y RP LRP+ LL K+ A+ RSIE QR E L H+ + +L+ ++ + E + +
Sbjct: 729 YKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEIEQMEKVTDKGD 788
Query: 336 ETLRSDL 342
E L + L
Sbjct: 789 EELYNKL 795
>AT3G18390.1 | Symbols: EMB1865 | CRS1 / YhbY (CRM)
domain-containing protein | chr3:6313572-6317584 FORWARD
LENGTH=848
Length = 848
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 214/348 (61%), Gaps = 24/348 (6%)
Query: 1 MTTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTNSEIMAEEI 60
MT LR++ + +P HFALGRNR QGLAAAI+++WE+ I KIAVKRG+QNTN+++MA+E+
Sbjct: 447 MTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVKRGIQNTNNKLMADEV 506
Query: 61 KHLTGGNLLARDREFIVFYRGKDFLPAAVSSAIEQRRNIGLYKLKAENSL---------- 110
K LTGG LL R++ +IV YRGKDFLP++V++ + +R+ + E +
Sbjct: 507 KTLTGGVLLLRNKYYIVIYRGKDFLPSSVAATLAERQELTKEIQDVEERVRNREIEAVQP 566
Query: 111 --SVVPADSEGNGVTFQKDTEIFKKELLTKAKE-----------ANKFKKSSIXXXXXXX 157
VPA++ G F + + KE+ +E A K+
Sbjct: 567 VGDKVPAEA-GTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVKRIQHKLNLAQS 625
Query: 158 XXXXXXXXXXXXXXXXSPQEQEIDKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVE 217
P + D+E I+EEER M RK+GLKM+ +L +G RGVFDG +E
Sbjct: 626 KFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIE 685
Query: 218 NMHLHWKYRELVKVICKEGSLEAVYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYS 277
NMHLHWK+RELVK+I K+ + V + A+ LE ESGG+LVA+E+V KG+A+I YRGKNY
Sbjct: 686 NMHLHWKHRELVKLISKQKNQAFVEETARLLEYESGGVLVAIEKVPKGFALIYYRGKNYR 745
Query: 278 RPASLRPQTLLNKKLAMKRSIEAQRYESLKLHVLNLDKNINELKLQMV 325
RP SLRP+ LL K A+KRSI QR+E+L H+ L++ I +++ Q+
Sbjct: 746 RPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSQLT 793
>AT5G16180.1 | Symbols: CRS1, ATCRS1 | ortholog of maize chloroplast
splicing factor CRS1 | chr5:5279884-5282898 FORWARD
LENGTH=720
Length = 720
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 201/348 (57%), Gaps = 23/348 (6%)
Query: 1 MTTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTNSEIMAEEI 60
+T LR +++P+P HF LGRN LQGLA+AI+KLWE+C I KIA+K G NTN+E MA+E+
Sbjct: 366 LTYLRNIAQPLPFHFVLGRNYGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADEL 425
Query: 61 KHLTGGNLLARDREFIVFYRGKDFLPAAVSSAIEQR-RNIGLYKLKAENS-------LSV 112
++LTGG L+ R++ IV YRGKDFL V+ +E R R + Y+ E L V
Sbjct: 426 RYLTGGVLILRNKYLIVLYRGKDFLSDEVADLVEDRERLLSRYQHFEETKRESDIELLEV 485
Query: 113 VP-------ADSEGNGVTFQ----KDTEIFKKELLTKAKEA---NKFKKSSIXXXXXXXX 158
V + G + FQ K E+ + L T+A++A + K
Sbjct: 486 VTNGKQLKETNKSGTLLEFQELQRKFGEMDPRNLETEAEKARLEKELKSQEHKLSILKSK 545
Query: 159 XXXXXXXXXXXXXXXSPQEQEIDKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVEN 218
P E + D E +T EER LR+IGLKM L+LGRRGVF G +E
Sbjct: 546 IEKSNMELFKLNSLWKPSEGDDDIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEG 605
Query: 219 MHLHWKYRELVKVICKEGSLEAVYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSR 278
+H HWK+RE+ KVI + V A+ LE ES G+L+++E++ +G+AI++YRGKNY R
Sbjct: 606 LHQHWKHREVAKVITMQKLFSRVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKR 665
Query: 279 PAS-LRPQTLLNKKLAMKRSIEAQRYESLKLHVLNLDKNINELKLQMV 325
P+S L Q LL K+ A++RS+ QR SLK ++ I +LK+ +V
Sbjct: 666 PSSKLMAQNLLTKRKALQRSVVMQRLGSLKFFAYQRERAIEDLKVSLV 713
>AT4G14510.1 | Symbols: ATCFM3B, CFM3B | CRM family member 3B |
chr4:8337390-8341057 REVERSE LENGTH=907
Length = 907
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 124/161 (77%), Gaps = 5/161 (3%)
Query: 175 PQEQEIDKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYRELVKVICK 234
P EQ D EGITEEER+M +K+GLKM+ FLLLGRRGVFDGTVENMHLHWKYREL+K++ K
Sbjct: 655 PAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVK 714
Query: 235 EGSLEAVYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLLNKKLAM 294
+LE +VA LEAESGGILV+V+++SKGYA+IVYRGK+Y RP +LRP+ LL K+ A+
Sbjct: 715 AKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKAL 774
Query: 295 KRSIEAQRYESLKLHVLNLDKNINELK-----LQMVKDEAN 330
RS+E Q+ E+L H+ + +L+ +++VKD+ +
Sbjct: 775 ARSLELQKREALIKHIEAIQTRSEQLRAEIEQVELVKDKGD 815
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 76/95 (80%)
Query: 2 TTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTNSEIMAEEIK 61
T+LRR++ +P HFALGR+R+LQGLA A++KLW++ I K+A+KRGVQ T SE MAE+IK
Sbjct: 429 TSLRRIATVLPPHFALGRSRQLQGLATAMVKLWQKSLIAKVALKRGVQLTTSERMAEDIK 488
Query: 62 HLTGGNLLARDREFIVFYRGKDFLPAAVSSAIEQR 96
LTGG LL+R+++F+VFYRGK FL V A+ ++
Sbjct: 489 RLTGGMLLSRNKDFLVFYRGKSFLSLEVGEALMEK 523
>AT4G29750.1 | Symbols: | CRS1 / YhbY (CRM) domain-containing
protein | chr4:14569728-14572962 FORWARD LENGTH=841
Length = 841
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 109/147 (74%)
Query: 175 PQEQEIDKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYRELVKVICK 234
P E D E ITEEER + RKIGL M PFLLLGRR V+DGT+ENMHLHWK+RELVKVI +
Sbjct: 637 PSELPTDSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVR 696
Query: 235 EGSLEAVYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLLNKKLAM 294
SL V +A +LEAESGG+LV+V++ KGYAII+YRGKNY P LRP LL +K A
Sbjct: 697 GKSLPQVKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLLTRKKAF 756
Query: 295 KRSIEAQRYESLKLHVLNLDKNINELK 321
RSIE QR E+LK HV +L++ I LK
Sbjct: 757 ARSIELQRREALKYHVADLEERIELLK 783
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 79/97 (81%)
Query: 1 MTTLRRLSRPIPSHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTNSEIMAEEI 60
MT +RRL+R P HFALGR+R+LQGLA A++KLW + I KIA+KRGV+NT +E MAEE+
Sbjct: 436 MTEMRRLARTSPPHFALGRSRELQGLAKAMVKLWAKSAIAKIAIKRGVENTRNERMAEEL 495
Query: 61 KHLTGGNLLARDREFIVFYRGKDFLPAAVSSAIEQRR 97
K LT G L++R++E+IVFYRG DF+P AV+ A+ +R+
Sbjct: 496 KRLTRGVLVSRNKEYIVFYRGNDFMPPAVAEALTERQ 532
>AT4G13070.1 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain
protein | chr4:7621780-7623051 REVERSE LENGTH=343
Length = 343
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 81/132 (61%), Gaps = 9/132 (6%)
Query: 174 SPQEQEIDKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYRELVKVIC 233
SP E D E +TEEE++ L++ G K + F+L+GRRGVF G V N+HLHWK E VKVIC
Sbjct: 172 SPAE-PYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVIC 230
Query: 234 KEGSLEA-VYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLLNKKL 292
K + V++ A+ L S GI++ V+ I++YRGKNY RP + P L+K
Sbjct: 231 KPCNKPGQVHEYAEELARLSKGIVIDVK---PNNTIVLYRGKNYVRPEVMSPVDTLSK-- 285
Query: 293 AMKRSIEAQRYE 304
+++E RYE
Sbjct: 286 --DKALEKYRYE 295
>AT2G28480.1 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain
protein | chr2:12176642-12178031 REVERSE LENGTH=372
Length = 372
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
Query: 176 QEQEIDKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYRELVKVICKE 235
Q E+ IT EER+ L+K+G K ++ +GRRGVF G + NMHLHWK E VKVIC
Sbjct: 155 QGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNN 214
Query: 236 GSLEAVYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLLNKKLAMK 295
V Q A+ L SGG+ V + II YRGK Y +P + P L+KK A +
Sbjct: 215 SKPGQVQQYAEELAKLSGGVPV---NIIGDDTIIFYRGKGYVQPQVMSPIDTLSKKRAYE 271
Query: 296 RSIEAQRYESLKLHVLNLDKNINELKLQMVK--DEANSK 332
+S Q ES++ H + + + EL + V D+ N++
Sbjct: 272 KSKYEQSLESVR-HFIAIAEKELELYYRHVALYDDPNNR 309
>AT3G25440.1 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain
protein | chr3:9223998-9225505 FORWARD LENGTH=444
Length = 444
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 93/155 (60%), Gaps = 10/155 (6%)
Query: 181 DKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYRELVKVICKEGSLEA 240
D E +T EE + K+GLK + ++ +GRRG++ G + NMHLHWK + ++V+ K + +
Sbjct: 173 DPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDE 232
Query: 241 VYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPAS--LRPQTLLNKKLAMKRSI 298
V ++A L +GGI++ V +G II+YRGKNY +P + + P+ L +K A+ +S
Sbjct: 233 VKEIAVELARLTGGIVLDVH---EGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSK 289
Query: 299 EAQRYESLKLHVLNLDKNINELKLQMVKDEANSKQ 333
+++ ++ L E +LQ+++ +A +K+
Sbjct: 290 CRDALRAVRKYIPRL-----EQELQLLQAQAETKR 319
>AT3G25440.2 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain
protein | chr3:9224294-9225505 FORWARD LENGTH=380
Length = 380
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 93/155 (60%), Gaps = 10/155 (6%)
Query: 181 DKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYRELVKVICKEGSLEA 240
D E +T EE + K+GLK + ++ +GRRG++ G + NMHLHWK + ++V+ K + +
Sbjct: 109 DPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDE 168
Query: 241 VYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPAS--LRPQTLLNKKLAMKRSI 298
V ++A L +GGI++ V +G II+YRGKNY +P + + P+ L +K A+ +S
Sbjct: 169 VKEIAVELARLTGGIVLDVH---EGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSK 225
Query: 299 EAQRYESLKLHVLNLDKNINELKLQMVKDEANSKQ 333
+++ ++ L E +LQ+++ +A +K+
Sbjct: 226 CRDALRAVRKYIPRL-----EQELQLLQAQAETKR 255
>AT3G27550.1 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain
protein | chr3:10208010-10209899 REVERSE LENGTH=491
Length = 491
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Query: 181 DKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYRELVKVICKEGSLEA 240
D E T E+ +KIG K + ++ +G RGVF G V+NMH+HWK+ E V+V C E
Sbjct: 88 DPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEK 147
Query: 241 VYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLLNKKLAMKRSIEA 300
+ ++A + SGG+++ + V II++RG+NY +P +L P L K+ A+ ++
Sbjct: 148 IKEMASMIARLSGGVVINIHNVK---TIIMFRGRNYRQPKNLIPVNTLTKRKALFKARFE 204
Query: 301 QRYESLKLHVLNLDKNINEL 320
Q ES KL++ ++ + +
Sbjct: 205 QALESQKLNIKKTEQQLRRM 224
>AT2G20020.1 | Symbols: CAF1, ATCAF1 | RNA-binding CRS1 / YhbY (CRM)
domain-containing protein | chr2:8644464-8647090 FORWARD
LENGTH=701
Length = 701
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 177 EQEIDKEGITEEERYMLRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYRELVKVICKEG 236
++EI E +T+EE L LK L +GR G+ + N+H WK R + K+ CK
Sbjct: 235 KEEILGEPLTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGV 294
Query: 237 SLEAVYQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLLNKKLA 293
+ V + LE + GG ++ +G + ++RG+NY+ R +L K +A
Sbjct: 295 CTVDMDNVCEQLEEKIGGKVI----YRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVA 347