Miyakogusa Predicted Gene

Lj2g3v1020070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1020070.1 Non Chatacterized Hit- tr|I3S4G0|I3S4G0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.31,0,Ferredoxin thioredoxin reductase (FTR), catalytic beta
chain,Ferredoxin thioredoxin reductase beta s,CUFF.35949.1
         (144 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G04700.1 | Symbols:  | ferredoxin thioredoxin reductase catal...   230   3e-61

>AT2G04700.1 | Symbols:  | ferredoxin thioredoxin reductase
           catalytic beta chain family protein |
           chr2:1646961-1648345 FORWARD LENGTH=146
          Length = 146

 Score =  230 bits (586), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 108/145 (74%), Positives = 122/145 (84%), Gaps = 2/145 (1%)

Query: 1   MTSQACSFA-VTVPSVASPLRRHRNLHVVRAQVEPSEKSIEIMRKFSEQYARKSGTYFCV 59
           + + +CSF  ++ P   +P    R   V+RA+ EPSEKS+EIMRKFSEQYAR+SGTYFCV
Sbjct: 3   LQAVSCSFGFLSSPLGVTPRTSFRRF-VIRAKTEPSEKSVEIMRKFSEQYARRSGTYFCV 61

Query: 60  DKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKPAEAQQGFWNCPCVPMRERKECHCMLFL 119
           DK VTSVVIKGLA+HKDS GAPLCPCRHYDDK AE  QGFWNCPCVPMRERKECHCMLFL
Sbjct: 62  DKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECHCMLFL 121

Query: 120 TPENDFAGKEQAITLDEIRETTANM 144
           TP+NDFAGK+Q IT DEI+ETTANM
Sbjct: 122 TPDNDFAGKDQTITSDEIKETTANM 146