Miyakogusa Predicted Gene

Lj2g3v1020060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1020060.1 Non Chatacterized Hit- tr|F0WRL0|F0WRL0_9STRA
Putative uncharacterized protein AlNc14C216G9011
OS=Al,39.42,1e-18,SSF118310,NULL; ZF_AN1,Zinc finger, AN1-type;
zf-AN1,Zinc finger, AN1-type; PTHR14677,NULL; Znf_AN1,,CUFF.35948.1
         (195 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G28210.1 | Symbols: PMZ, SAP12 | zinc finger (AN1-like) famil...   217   3e-57
AT2G41835.1 | Symbols:  | zinc finger (C2H2 type, AN1-like) fami...   133   6e-32
AT3G57480.1 | Symbols:  | zinc finger (C2H2 type, AN1-like) fami...   131   2e-31
AT5G48205.1 | Symbols:  | zinc ion binding | chr5:19546937-19547...    68   4e-12

>AT3G28210.1 | Symbols: PMZ, SAP12 | zinc finger (AN1-like) family
           protein | chr3:10520585-10521223 FORWARD LENGTH=186
          Length = 186

 Score =  217 bits (553), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 105/169 (62%), Positives = 125/169 (73%), Gaps = 5/169 (2%)

Query: 1   MASGGTEAFPDLGKHCQHHDCHQLDFLPFTCDACKQVFCVEHRSYKSHACPKPDHNSRKV 60
           MA GGTEAFPDLG+HCQ  DC  LDFLPFTCD CK VFC+EHRSYKSH CPK DH SR V
Sbjct: 1   MAGGGTEAFPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNCPKSDHGSRTV 60

Query: 61  VVCETCSMSIETTSQVGQEEEEALLKRHLKSGNCDPNKKKKPICPVKRCKEVLTFSNAST 120
            +CETCS++IETT    ++  ++LL++H +SG+CDPNKKKKP CPVKRCKE+LTF+N  T
Sbjct: 61  SICETCSIAIETTG-FDEKGIKSLLEKHERSGDCDPNKKKKPTCPVKRCKEILTFANNLT 119

Query: 121 CKTCQVKVCLKHRFPADHACGRVXXXXXXXXXXVNGGWNNRFLDALASR 169
           CK C VK CLKHRFP DH C +            +  WN RF++AL+ R
Sbjct: 120 CKYCGVKFCLKHRFPTDHVCNK----KIINTAGTSSRWNERFMEALSLR 164


>AT2G41835.1 | Symbols:  | zinc finger (C2H2 type, AN1-like) family
           protein | chr2:17458020-17459414 REVERSE LENGTH=279
          Length = 279

 Score =  133 bits (335), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 69/140 (49%), Positives = 84/140 (60%), Gaps = 8/140 (5%)

Query: 5   GTEAFPDLGKHCQHHDCHQLDFLPFTCDACKQVFCVEHRSYKSHACPKPDHNSRKVVVCE 64
           GT  FPDLGKHC    C Q+DFLPFTCD C QVFC++HRSY  H+CPK D     VV+C 
Sbjct: 2   GTPEFPDLGKHCSVDVCKQIDFLPFTCDRCLQVFCLDHRSYMKHSCPKGDREDVTVVICP 61

Query: 65  TCSMSIETTSQVGQEEEEALLKRHLKSGNCDPNK----KKKPICPVKRCKEVLTFSNAST 120
            C+  +        E+     ++H+ + +CDP+      KK  CPV RCKE LTFSN   
Sbjct: 62  LCAKGVRLNP---NEDPNITWEKHVNT-DCDPSNYEKATKKKKCPVPRCKEYLTFSNTIK 117

Query: 121 CKTCQVKVCLKHRFPADHAC 140
           C+ C V  CLKHRF  DH C
Sbjct: 118 CRDCNVDHCLKHRFGPDHTC 137


>AT3G57480.1 | Symbols:  | zinc finger (C2H2 type, AN1-like) family
           protein | chr3:21278083-21279119 REVERSE LENGTH=249
          Length = 249

 Score =  131 bits (330), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 86/140 (61%), Gaps = 8/140 (5%)

Query: 5   GTEAFPDLGKHCQHHDCHQLDFLPFTCDACKQVFCVEHRSYKSHACPKPDHNSRKVVVCE 64
           GT  FPDLGKHC    C Q+DFLPFTCD C QV+C++HRSY  H CPK +     VV+C 
Sbjct: 2   GTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVICP 61

Query: 65  TCSMSIETTSQVGQEEEEALLKRHLKSGNCDPNKKKKPI----CPVKRCKEVLTFSNAST 120
            C+  +        E+     ++H+ + +CDP+  +K +    CPV RC+E+LTFSN   
Sbjct: 62  LCAKGVRLNP---DEDPNITWEKHVNT-DCDPSNYEKAVKKKKCPVPRCRELLTFSNTIK 117

Query: 121 CKTCQVKVCLKHRFPADHAC 140
           C+ C +  CLKHRF  DH+C
Sbjct: 118 CRDCSIDHCLKHRFGPDHSC 137


>AT5G48205.1 | Symbols:  | zinc ion binding | chr5:19546937-19547787
           REVERSE LENGTH=191
          Length = 191

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 51/111 (45%), Gaps = 34/111 (30%)

Query: 5   GTEAFPDLGKHCQHHDCHQLDFLPFTCDACKQVFCVEHRSYKSHACPKPDHNSRKVVVCE 64
           GT  FPDLGKHC    C Q+DFLPFTCD C QV C++H SY  +    PD          
Sbjct: 2   GTPEFPDLGKHCSVDVCTQIDFLPFTCDRCLQVLCLDHCSYMLN----PD---------- 47

Query: 65  TCSMSIETTSQVGQEEEEALLKRHLKSGNCDPN------KKKKPICPVKRC 109
                         E+      +H+   +CDP+      KKKK  CPV  C
Sbjct: 48  --------------EDSNITWDKHVNDTDCDPSNYENDVKKKKKQCPVSSC 84