Miyakogusa Predicted Gene

Lj2g3v1019910.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1019910.1 Non Chatacterized Hit- tr|C0PQI9|C0PQI9_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,39.22,7e-19,HMA, heavy metal-associated domain,Heavy
metal-associated domain, HMA; HMA_2,Heavy metal-associated
,CUFF.35938.1
         (178 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14910.1 | Symbols:  | Heavy metal transport/detoxification s...   128   2e-30

>AT5G14910.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:4823815-4825196 FORWARD
           LENGTH=178
          Length = 178

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/90 (71%), Positives = 77/90 (85%), Gaps = 1/90 (1%)

Query: 87  ISPSDTLTMLFQAEGILNETAVPALTKALEETDGVTNLRVHLFEGLASLELEKQTTVQAT 146
           +SPSD LTM FQA+G LNE A+P +T+AL++ DGV+NL+V + EG+A +EL KQTTVQAT
Sbjct: 87  VSPSDMLTMFFQADGTLNEAAIPNVTRALQDIDGVSNLKVQVSEGVAVVELLKQTTVQAT 146

Query: 147 GVASSLVETIQGLGFKLQTLNLSF-DDAEV 175
           GVAS+LVETIQG GFKLQTLNLSF DD EV
Sbjct: 147 GVASNLVETIQGAGFKLQTLNLSFEDDDEV 176