Miyakogusa Predicted Gene

Lj2g3v1019870.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1019870.2 Non Chatacterized Hit- tr|I1J5K0|I1J5K0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,84.62,9e-18,GB
DEF: T7N9.12,NULL; REGULATOR OF CHROMOSOME CONDENSATION,NULL;
RCC1/BLIP-II,Regulator of chromosom,CUFF.35937.2
         (96 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27060.1 | Symbols:  | Regulator of chromosome condensation (...    77   2e-15

>AT1G27060.1 | Symbols:  | Regulator of chromosome condensation
           (RCC1) family protein | chr1:9395023-9396673 FORWARD
           LENGTH=386
          Length = 386

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 43/55 (78%)

Query: 39  SENGEVKTWGWGEHGQLGLGDTCDRISPDTVSLGYDLNEAASIRVYYGSGFTFAL 93
           +ENGEVKTWGWGEHGQLGLG+T D+ SP+ VSLG        I+VY GSGFT+A+
Sbjct: 321 TENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVYCGSGFTYAV 375