Miyakogusa Predicted Gene

Lj2g3v1014150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1014150.1 Non Chatacterized Hit- tr|I1KCG8|I1KCG8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,34.82,1e-18,seg,NULL;
DUF588,Uncharacterised protein family UPF0497, trans-membrane
plant,CUFF.35886.1
         (239 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40300.1 | Symbols:  | Uncharacterised protein family (UPF049...    72   3e-13
AT2G36330.1 | Symbols:  | Uncharacterised protein family (UPF049...    72   4e-13
AT5G62820.1 | Symbols:  | Uncharacterised protein family (UPF049...    66   3e-11

>AT5G40300.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:16110778-16112701 FORWARD LENGTH=270
          Length = 270

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 19/144 (13%)

Query: 73  KKEKWWC---KVLLGMRISALILCLKAFAVLAADNQNVVVPRSVHLYYVMVVEAFRWKDY 129
           ++ KW     K LLG R+ A + CL +F+V+ +D        S +             +Y
Sbjct: 111 RESKWASLIRKALLGFRVIAFVSCLVSFSVMVSDRDKGWAHDSFY-------------NY 157

Query: 130 NEFKYIVAVNVIGFLYSGLQISELVKYLITKKHTVNPRIRGYFSVIMDQGLAYLLMXXXX 189
            EF++ +A NVIGF+YSG  I +LV  L T        +R +    +DQ LAYLL     
Sbjct: 158 KEFRFCLAANVIGFVYSGFMICDLVYLLSTSIRRSRHNLRHFLEFGLDQMLAYLLASAST 217

Query: 190 XXXXTIHIYRSYWTGEGAHTFTDM 213
                +  ++S W   GA  F D+
Sbjct: 218 SASIRVDDWQSNW---GADKFPDL 238


>AT2G36330.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15233620-15235298 FORWARD LENGTH=283
          Length = 283

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 16/131 (12%)

Query: 83  LGMRISALILCLKAFAVLAADNQNVVVPRSVHLYYVMVVEAFRWKDYNEFKYIVAVNVIG 142
           LG R+S ++L L +F+++AAD        S             +  Y E+++ ++VNV+ 
Sbjct: 137 LGFRLSEVVLALISFSIMAADKTKGWSGDS-------------FDRYKEYRFCLSVNVVA 183

Query: 143 FLYSGLQISELVKYLITKKHTVNPRIRGYFSVIMDQGLAYLLMXXXXXXXXTIHIYRSYW 202
           F+YS  Q  +L  +L+ +KH ++  +R  F  I+DQ LAYLLM         +  + S W
Sbjct: 184 FVYSSFQACDLAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSASTAAVTRVDDWVSNW 243

Query: 203 TGEGAHTFTDM 213
              G   FT+M
Sbjct: 244 ---GKDEFTEM 251


>AT5G62820.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:25223828-25224898 REVERSE LENGTH=297
          Length = 297

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 16/131 (12%)

Query: 83  LGMRISALILCLKAFAVLAADNQNVVVPRSVHLYYVMVVEAFRWKDYNEFKYIVAVNVIG 142
           LG RI+ +ILC+ +F+++AAD        S             +  Y E++Y +AVNVI 
Sbjct: 151 LGFRITEVILCVISFSIMAADKTQGWSGDS-------------YDRYKEYRYCLAVNVIA 197

Query: 143 FLYSGLQISELVKYLITKKHTVNPRIRGYFSVIMDQGLAYLLMXXXXXXXXTIHIYRSYW 202
           F+YS  +  +   Y+  + + +N      F   MDQ LAYLLM         +  + S W
Sbjct: 198 FVYSAFEACDAACYIAKESYMINCGFHDLFVFSMDQLLAYLLMSASSCAATRVDDWVSNW 257

Query: 203 TGEGAHTFTDM 213
              G   FT M
Sbjct: 258 ---GKDEFTQM 265