Miyakogusa Predicted Gene

Lj2g3v1014120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1014120.1 Non Chatacterized Hit- tr|A5AM50|A5AM50_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.57,2e-17,DUF588,Uncharacterised protein family UPF0497,
trans-membrane plant; seg,NULL,CUFF.35883.1
         (238 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40300.1 | Symbols:  | Uncharacterised protein family (UPF049...    95   5e-20
AT2G36330.1 | Symbols:  | Uncharacterised protein family (UPF049...    90   1e-18
AT5G62820.1 | Symbols:  | Uncharacterised protein family (UPF049...    84   1e-16

>AT5G40300.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:16110778-16112701 FORWARD LENGTH=270
          Length = 270

 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 76/150 (50%), Gaps = 24/150 (16%)

Query: 64  SKKEEKWC----RALLGVRVSAFVLCLISFTVMAADKVEGVVIESMDLFGNFFSTEEPYS 119
           + +E KW     +ALLG RV AFV CL+SF+VM +D+ +G   +S               
Sbjct: 109 TPRESKWASLIRKALLGFRVIAFVSCLVSFSVMVSDRDKGWAHDS--------------- 153

Query: 120 FRWYDYKEFKYSLAVNVIGFVYSGLQICDLVKYLITKKHTLNLRIRGYFSVAMDQGFAYL 179
             +Y+YKEF++ LA NVIGFVYSG  ICDLV  L T        +R +    +DQ  AYL
Sbjct: 154 --FYNYKEFRFCLAANVIGFVYSGFMICDLVYLLSTSIRRSRHNLRHFLEFGLDQMLAYL 211

Query: 180 LMXXXXXXXXTIHISRSYWVGEGVHKFTDM 209
           L          +   +S W   G  KF D+
Sbjct: 212 LASASTSASIRVDDWQSNW---GADKFPDL 238


>AT2G36330.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15233620-15235298 FORWARD LENGTH=283
          Length = 283

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 21/154 (13%)

Query: 57  SVSGFLM-SKKEEKWCRALLGVRVSAFVLCLISFTVMAADKVEGVVIESMDLFGNFFSTE 115
           +VS  L  S++EE    + LG R+S  VL LISF++MAADK +G   +S D         
Sbjct: 118 AVSAILRRSRREEVVKFSALGFRLSEVVLALISFSIMAADKTKGWSGDSFDR-------- 169

Query: 116 EPYSFRWYDYKEFKYSLAVNVIGFVYSGLQICDLVKYLITKKHTLNLRIRGYFSVAMDQG 175
                    YKE+++ L+VNV+ FVYS  Q CDL  +L+ +KH ++  +R  F   +DQ 
Sbjct: 170 ---------YKEYRFCLSVNVVAFVYSSFQACDLAYHLVKEKHLISHHLRPLFEFIIDQV 220

Query: 176 FAYLLMXXXXXXXXTIHISRSYWVGEGVHKFTDM 209
            AYLLM         +    S W   G  +FT+M
Sbjct: 221 LAYLLMSASTAAVTRVDDWVSNW---GKDEFTEM 251


>AT5G62820.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:25223828-25224898 REVERSE LENGTH=297
          Length = 297

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 20/135 (14%)

Query: 75  LGVRVSAFVLCLISFTVMAADKVEGVVIESMDLFGNFFSTEEPYSFRWYDYKEFKYSLAV 134
           LG R++  +LC+ISF++MAADK +G   +S D                  YKE++Y LAV
Sbjct: 151 LGFRITEVILCVISFSIMAADKTQGWSGDSYDR-----------------YKEYRYCLAV 193

Query: 135 NVIGFVYSGLQICDLVKYLITKKHTLNLRIRGYFSVAMDQGFAYLLMXXXXXXXXTIHIS 194
           NVI FVYS  + CD   Y+  + + +N      F  +MDQ  AYLLM         +   
Sbjct: 194 NVIAFVYSAFEACDAACYIAKESYMINCGFHDLFVFSMDQLLAYLLMSASSCAATRVDDW 253

Query: 195 RSYWVGEGVHKFTDM 209
            S W   G  +FT M
Sbjct: 254 VSNW---GKDEFTQM 265