Miyakogusa Predicted Gene

Lj2g3v1012920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1012920.1 Non Chatacterized Hit- tr|B9SBF0|B9SBF0_RICCO
Kinesin light chain, putative OS=Ricinus communis
GN=R,74.19,2e-16,TPR_12,NULL; no description,Tetratricopeptide-like
helical; SUBFAMILY NOT NAMED,NULL; KINESIN LIGHT
,NODE_29683_length_612_cov_133.465683.path2.1
         (123 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27960.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   188   6e-49
AT4G10840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   163   3e-41
AT1G27500.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   154   9e-39
AT4G10840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    80   4e-16

>AT3G27960.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:10380513-10382593 REVERSE
           LENGTH=663
          Length = 663

 Score =  188 bits (478), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 92/114 (80%), Positives = 104/114 (91%), Gaps = 1/114 (0%)

Query: 1   MGLACVQRYAINEAADLFEEARTILEKEYGQYHPDTLGVYSNLAGTYDAMGRVDDAIEIL 60
           MGLACVQRYAINEAADLFEEA+TILEKE G YHPDTL VYSNLAGTYDAMGR+DDAIEIL
Sbjct: 543 MGLACVQRYAINEAADLFEEAKTILEKECGPYHPDTLAVYSNLAGTYDAMGRLDDAIEIL 602

Query: 61  EFVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRNRKSKRSLETLLDANSRL 114
           E+VVG REEKLGTANP+V+DEK+RLA LLKEAGRGR++++ R+L TLLD N  +
Sbjct: 603 EYVVGTREEKLGTANPEVEDEKQRLAALLKEAGRGRSKRN-RALLTLLDNNPEI 655


>AT4G10840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:6656614-6659033 FORWARD
           LENGTH=609
          Length = 609

 Score =  163 bits (412), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 83/119 (69%), Positives = 97/119 (81%), Gaps = 1/119 (0%)

Query: 1   MGLACVQRYAINEAADLFEEARTILEKEYGQYHPDTLGVYSNLAGTYDAMGRVDDAIEIL 60
           MGLACVQ + I+EA +LFEEAR ILE+E G    DTLGVYSNLA TYDAMGR++DAIEIL
Sbjct: 480 MGLACVQLFKIDEAGELFEEARGILEQERGPCDQDTLGVYSNLAATYDAMGRIEDAIEIL 539

Query: 61  EFVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRNRKSKRSLETLLDANSRLIKNNS 119
           E V+ +REEKLGTANPD +DEK+RLAELLKEAGR RN K+K SL+ L+D N+R  K  S
Sbjct: 540 EQVLKLREEKLGTANPDFEDEKKRLAELLKEAGRSRNYKAK-SLQNLIDPNARPPKKES 597


>AT1G27500.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:9551629-9553654 REVERSE
           LENGTH=650
          Length = 650

 Score =  154 bits (390), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 76/111 (68%), Positives = 94/111 (84%), Gaps = 1/111 (0%)

Query: 1   MGLACVQRYAINEAADLFEEARTILEKEYGQYHPDTLGVYSNLAGTYDAMGRVDDAIEIL 60
           MGLAC+Q  AI EA +LFEEA+ ILE+E G YHP+TLG+YSNLAG YDA+GR+DDAI++L
Sbjct: 533 MGLACIQLDAIEEAVELFEEAKCILEQECGPYHPETLGLYSNLAGAYDAIGRLDDAIKLL 592

Query: 61  EFVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRNRKSKRSLETLLDAN 111
             VVG+REEKLGTANP  +DEKRRLA+LLKEAG    RK+K SL+TL+D++
Sbjct: 593 GHVVGVREEKLGTANPVTEDEKRRLAQLLKEAGNVTGRKAK-SLKTLIDSD 642


>AT4G10840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:6656614-6658702 FORWARD
           LENGTH=531
          Length = 531

 Score = 79.7 bits (195), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/52 (73%), Positives = 42/52 (80%)

Query: 1   MGLACVQRYAINEAADLFEEARTILEKEYGQYHPDTLGVYSNLAGTYDAMGR 52
           MGLACVQ + I+EA +LFEEAR ILE+E G    DTLGVYSNLA TYDAMGR
Sbjct: 480 MGLACVQLFKIDEAGELFEEARGILEQERGPCDQDTLGVYSNLAATYDAMGR 531