Miyakogusa Predicted Gene

Lj2g3v1012880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1012880.1 CUFF.35928.1
         (355 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14760.1 | Symbols: AO | L-aspartate oxidase | chr5:4769133-4...   539   e-153
AT5G66760.1 | Symbols: SDH1-1 | succinate dehydrogenase 1-1 | ch...   141   8e-34
AT2G18450.1 | Symbols: SDH1-2 | succinate dehydrogenase 1-2 | ch...   137   1e-32

>AT5G14760.1 | Symbols: AO | L-aspartate oxidase |
           chr5:4769133-4772012 FORWARD LENGTH=651
          Length = 651

 Score =  539 bits (1388), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 256/334 (76%), Positives = 292/334 (87%), Gaps = 2/334 (0%)

Query: 19  FVQFHPTALADEGLPIKPTKLRDNAFLITEAVRGDGGILYNLGMERFMPLYDERAELAPR 78
           FVQFHPTALADEGLPIK    R+NAFLITEAVRGDGGILYNLGMERFMP+YDERAELAPR
Sbjct: 309 FVQFHPTALADEGLPIKLQTARENAFLITEAVRGDGGILYNLGMERFMPVYDERAELAPR 368

Query: 79  DVVARSIDDQLKKRDDKYVLLDISHKPKEEILSHFPNIASFCLQYGLDITRHPIPVVPAA 138
           DVVARSIDDQLKKR++KYVLLDISHKP+E+IL+HFPNIAS CL++GLDITR PIPVVPAA
Sbjct: 369 DVVARSIDDQLKKRNEKYVLLDISHKPREKILAHFPNIASECLKHGLDITRQPIPVVPAA 428

Query: 139 HYMCGGVRAGLEGETNVQGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSVDQM 198
           HYMCGGVRAGL+GETNV GL+VAGEVACTGLHGANRLASNSLLEALVFARRAVQPS + M
Sbjct: 429 HYMCGGVRAGLQGETNVLGLFVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSTELM 488

Query: 199 KSSSLDLTASNLWPRPIVPLS--LESDVMNKILSLTKELRKELQSIMWYYVGIVRSTMRL 256
           K + LD+ AS  W RP+V  +  L  +V+ KI++LTKE+R+ELQ +MW YVGIVRST+RL
Sbjct: 489 KRTRLDVCASEKWTRPVVATARLLGDEVIAKIIALTKEVRRELQEVMWKYVGIVRSTIRL 548

Query: 257 ETAELKIGNLEAKWEEYLFQHGWKPTMVAPEICEMRNLFCCAKLVVSSALSRHESRGLHY 316
            TAE KI  LEAKWE +LF+HGW+ T+VA E CEMRNLFCCAKLVVSSAL+RHESRGLHY
Sbjct: 549 TTAERKIAELEAKWETFLFEHGWEQTVVALEACEMRNLFCCAKLVVSSALARHESRGLHY 608

Query: 317 TIDFPYLEESERLPTIIFPSSRVKSTRSFRQLHK 350
             DFP++EES+R+PTII PSS   ++ S R+L  
Sbjct: 609 MTDFPFVEESKRIPTIILPSSPTTASWSSRRLQN 642


>AT5G66760.1 | Symbols: SDH1-1 | succinate dehydrogenase 1-1 |
           chr5:26653776-26657224 FORWARD LENGTH=634
          Length = 634

 Score =  141 bits (355), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 157/338 (46%), Gaps = 53/338 (15%)

Query: 19  FVQFHPTALADEGLPIKPTKLRDNAFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAP 77
           FVQFHPT +   G             LITE  RG+GGIL N   ERFM  Y   A +LA 
Sbjct: 281 FVQFHPTGIYGAGC------------LITEGSRGEGGILRNSEGERFMERYAPTAKDLAS 328

Query: 78  RDVVARSIDDQLKKR-----DDKYVLLDISHKPKEEILSHFPNIASFCLQY-GLDITRHP 131
           RDVV+RS+  ++++         ++ L ++H P E +    P I+     + G+D+T+ P
Sbjct: 329 RDVVSRSMTMEIREGRGVGPHKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEP 388

Query: 132 IPVVPAAHYMCGGVRAGLEGE----------TNVQGLYVAGEVACTGLHGANRLASNSLL 181
           IPV+P  HY  GG+     GE            + GL  AGE AC  +HGANRL +NSLL
Sbjct: 389 IPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVIPGLMAAGEAACASVHGANRLGANSLL 448

Query: 182 EALVFAR----RAVQPSVDQMKSSSLDLTASNLWPRPIVPLSLESDVMNKILSL-TKELR 236
           + +VF R    R  + S    K   L+  A     + I  L     + N   SL T  +R
Sbjct: 449 DIVVFGRACANRVAEISKPGEKQKPLEKDAGE---KTIAWLDR---LRNSNGSLPTSTIR 502

Query: 237 KELQSIMWYYVGIVRSTMRLE-------TAELKIGNLEAKWEEYLFQHGWKPTMVAPEIC 289
             +Q IM     + R+   LE        A    G+++ K    +    W   ++  E  
Sbjct: 503 LNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFGDVQVKDRSMI----WNSDLI--ETL 556

Query: 290 EMRNLFCCAKLVVSSALSRHESRGLHYTIDFPYLEESE 327
           E+ NL   A + + SA +R ESRG H   DF   E+ E
Sbjct: 557 ELENLLINASITMHSAEARKESRGAHAREDFTKREDGE 594


>AT2G18450.1 | Symbols: SDH1-2 | succinate dehydrogenase 1-2 |
           chr2:7997510-8000801 REVERSE LENGTH=632
          Length = 632

 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 154/331 (46%), Gaps = 41/331 (12%)

Query: 19  FVQFHPTALADEGLPIKPTKLRDNAFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAP 77
           FVQFHPT +   G             LITE  RG+GGIL N   E+FM  Y   A +LA 
Sbjct: 279 FVQFHPTGIYGAGC------------LITEGARGEGGILRNSEGEKFMDRYAPTARDLAS 326

Query: 78  RDVVARSIDDQLKKRDD-----KYVLLDISHKPKEEILSHFPNIASFCLQY-GLDITRHP 131
           RDVV+RS+  ++++         Y+ L ++H P E +    P I+     + G+D+TR P
Sbjct: 327 RDVVSRSMTMEIRQGRGAGPMKDYLYLYLNHLPPEVLKERLPGISETAAIFAGVDVTREP 386

Query: 132 IPVVPAAHYMCGGVRAGLEGE----------TNVQGLYVAGEVACTGLHGANRLASNSLL 181
           IPV+P  HY  GG+     GE            V GL  AGE AC  +HGANRL +NSLL
Sbjct: 387 IPVLPTVHYNMGGIPTNYHGEVITLRGDDPDAVVPGLMAAGEAACASVHGANRLGANSLL 446

Query: 182 EALVFARRAVQPSVD-QMKSSSLDLTASNLWPRPIVPLSLESDVMNKILSL-TKELRKEL 239
           + +VF R       + Q     L     +   + I  L     + N   SL T ++R  +
Sbjct: 447 DIVVFGRACANRVAEIQKPGEKLKPLEKDAGEKSIEWLDR---IRNSNGSLPTSKIRLNM 503

Query: 240 QSIMWYYVGIVRSTMRLETAELKIGNLEAKWEEYLFQHGWKPTMVAP----EICEMRNLF 295
           Q +M     + R+    ET E     ++  W+ +        +M+      E  E+ NL 
Sbjct: 504 QRVMQNNAAVFRTQ---ETLEEGCDLIDKTWDSFGDVKVTDRSMIWNSDLIETMELENLL 560

Query: 296 CCAKLVVSSALSRHESRGLHYTIDFPYLEES 326
             A + + SA +R ESRG H   DF   +++
Sbjct: 561 VNACITMHSAEARKESRGAHAREDFTKRDDA 591