Miyakogusa Predicted Gene

Lj2g3v1012820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1012820.1 Non Chatacterized Hit- tr|D8U1J4|D8U1J4_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,24.44,0.00000001, ,CUFF.35867.1
         (357 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27930.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   493   e-140
AT3G27930.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   481   e-136

>AT3G27930.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: N-terminal
           protein myristoylation; LOCATED IN: cellular_component
           unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
           DURING: 14 growth stages; Has 35 Blast hits to 35
           proteins in 12 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:10369593-10372318 REVERSE LENGTH=425
          Length = 425

 Score =  493 bits (1269), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 233/361 (64%), Positives = 284/361 (78%), Gaps = 4/361 (1%)

Query: 1   MFKPIDEPHVDLIATVSGPLDHKPEESITGNALFRWQSDVNDPHTFMDLYVSTSDPILRM 60
           + KP D+PHVDL+A+VSG +D + E    GNA FRWQSDV+DPHTF+DL VSTS+P+L M
Sbjct: 65  LLKPTDDPHVDLVASVSGAVDGRVEGDFVGNAEFRWQSDVDDPHTFVDLSVSTSNPVLLM 124

Query: 61  RSCAYYPRYGFGAFGVFPLLLR-KREFSEDYGLMGLRYGSGNLSFGVTLMPFAKKDELPK 119
           RS AYYP+YG GAF V+PL+ +   + SE+Y +MGLRYGS NLS G T+ PF+  +ELPK
Sbjct: 125 RSSAYYPKYGIGAFAVYPLISKITGKSSEEYRIMGLRYGSTNLSVGATVTPFSANNELPK 184

Query: 120 SAWLVSKMGRLTAGVQYEPQHGN---AKLSNLMNWSCAMAYGVGSGSPLSPSFNFSLELV 176
            AWLVSKMG LT GVQYEP HG+   AK ++  NWSCA  YGVGS SPL+PSFN  +EL 
Sbjct: 185 HAWLVSKMGSLTVGVQYEPLHGSKDLAKYTDPRNWSCAAGYGVGSQSPLTPSFNIGIELA 244

Query: 177 KSSQFVASFYQHMVVQRRVKNPLEENGVIGITNYIDFGFELQTSVDDAIATNNISDSTFR 236
           +SSQF+ASFYQH+VVQRRV+NP EEN V+GITNYIDFGFELQ+ VDD+    N  DS  +
Sbjct: 245 RSSQFIASFYQHVVVQRRVQNPFEENQVVGITNYIDFGFELQSRVDDSKTPPNAPDSLLQ 304

Query: 237 IGASWQANKNFLLKAKVGPRISSMALAFKSWWKPSFTFSISATRDRADGQIQYGFGIQSE 296
           + ASWQANKNFLLK KVG   S+++LAFKSWWKPSF F+ISAT +   G +Q GFG++ +
Sbjct: 305 VAASWQANKNFLLKGKVGAHSSTLSLAFKSWWKPSFAFNISATTNHRTGNVQCGFGLRVD 364

Query: 297 SLREASYQRADPNYVMLTPSKEHLAEGIAWTTGQRPMLQSDLDAGQFEGLPRDLRPLDKI 356
           +LREASYQRADPN+VMLTP+KEHLAEGI W  G+RPM Q+D+DA  F  LP++LRP  KI
Sbjct: 365 NLREASYQRADPNFVMLTPNKEHLAEGIVWKMGKRPMYQADVDAENFSELPKELRPSQKI 424

Query: 357 L 357
           L
Sbjct: 425 L 425


>AT3G27930.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 14 growth stages. |
           chr3:10369593-10372318 REVERSE LENGTH=420
          Length = 420

 Score =  481 bits (1237), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/361 (63%), Positives = 280/361 (77%), Gaps = 9/361 (2%)

Query: 1   MFKPIDEPHVDLIATVSGPLDHKPEESITGNALFRWQSDVNDPHTFMDLYVSTSDPILRM 60
           + KP D+PHVDL+A+VSG +D + E    GNA FRWQSDV+DPHTF+DL VSTS+P    
Sbjct: 65  LLKPTDDPHVDLVASVSGAVDGRVEGDFVGNAEFRWQSDVDDPHTFVDLSVSTSNP---- 120

Query: 61  RSCAYYPRYGFGAFGVFPLLLR-KREFSEDYGLMGLRYGSGNLSFGVTLMPFAKKDELPK 119
            S AYYP+YG GAF V+PL+ +   + SE+Y +MGLRYGS NLS G T+ PF+  +ELPK
Sbjct: 121 -SSAYYPKYGIGAFAVYPLISKITGKSSEEYRIMGLRYGSTNLSVGATVTPFSANNELPK 179

Query: 120 SAWLVSKMGRLTAGVQYEPQHGN---AKLSNLMNWSCAMAYGVGSGSPLSPSFNFSLELV 176
            AWLVSKMG LT GVQYEP HG+   AK ++  NWSCA  YGVGS SPL+PSFN  +EL 
Sbjct: 180 HAWLVSKMGSLTVGVQYEPLHGSKDLAKYTDPRNWSCAAGYGVGSQSPLTPSFNIGIELA 239

Query: 177 KSSQFVASFYQHMVVQRRVKNPLEENGVIGITNYIDFGFELQTSVDDAIATNNISDSTFR 236
           +SSQF+ASFYQH+VVQRRV+NP EEN V+GITNYIDFGFELQ+ VDD+    N  DS  +
Sbjct: 240 RSSQFIASFYQHVVVQRRVQNPFEENQVVGITNYIDFGFELQSRVDDSKTPPNAPDSLLQ 299

Query: 237 IGASWQANKNFLLKAKVGPRISSMALAFKSWWKPSFTFSISATRDRADGQIQYGFGIQSE 296
           + ASWQANKNFLLK KVG   S+++LAFKSWWKPSF F+ISAT +   G +Q GFG++ +
Sbjct: 300 VAASWQANKNFLLKGKVGAHSSTLSLAFKSWWKPSFAFNISATTNHRTGNVQCGFGLRVD 359

Query: 297 SLREASYQRADPNYVMLTPSKEHLAEGIAWTTGQRPMLQSDLDAGQFEGLPRDLRPLDKI 356
           +LREASYQRADPN+VMLTP+KEHLAEGI W  G+RPM Q+D+DA  F  LP++LRP  KI
Sbjct: 360 NLREASYQRADPNFVMLTPNKEHLAEGIVWKMGKRPMYQADVDAENFSELPKELRPSQKI 419

Query: 357 L 357
           L
Sbjct: 420 L 420