Miyakogusa Predicted Gene
- Lj2g3v0970440.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0970440.1 Non Chatacterized Hit- tr|I1K1H3|I1K1H3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43053
PE,46.99,7e-18,CYTOKINE LIKE NUCLEAR FACTOR,NULL; 3-HYDROXYISOBUTYRATE
DEHYDROGENASE-RELATED,Hydroxy monocarboxylic,CUFF.35843.1
(920 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40340.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 239 6e-63
AT3G27860.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 176 6e-44
AT5G02950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 133 5e-31
AT3G09670.2 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 126 9e-29
AT3G09670.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 126 9e-29
AT5G27650.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 112 1e-24
AT3G05430.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 110 5e-24
AT3G48190.1 | Symbols: ATM, ATATM | ataxia-telangiectasia mutate... 81 4e-15
>AT5G40340.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:16131654-16134680 REVERSE LENGTH=1008
Length = 1008
Score = 239 bits (611), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/270 (48%), Positives = 171/270 (63%), Gaps = 20/270 (7%)
Query: 219 YGFSVGDFVWGKIKSHPWWPGRIYDPFDASDAALKLQQKNRLLVAYFGDGTFAWCHPSQL 278
+G+ VGDFVWGKIK+HPWWPG+IYDP DASD ALK++QK +LLVA FGDGTFAWC SQL
Sbjct: 123 HGYCVGDFVWGKIKNHPWWPGQIYDPSDASDLALKIKQKGKLLVACFGDGTFAWCGASQL 182
Query: 279 KPFEENFIDMVKQSSSKAFVNAVQEAVSEVGRLLYVKMSHSLVAEKTKSELTPPLVNNFG 338
KPF E+F + K S+S++F+ AV+EAV E+GR + ++ AE+ K E PLVNN G
Sbjct: 183 KPFAESFKECSKVSNSRSFLGAVEEAVEEIGRHIE-RVLVCDCAEEKKHEFDSPLVNNAG 241
Query: 339 IKKGVLVPDGGIERLSGFPI-EPAELLSQVKHIAEIIATASILELEMLKARLSVFYLSRG 397
IK+GVLV D E +S I + E+L VK AE ++ + +LELE+LK ++S FY S
Sbjct: 242 IKEGVLVRDVRREMISSLLIGKHGEILKDVKSFAETVSFSGLLELEILKRKVSAFYRSNR 301
Query: 398 GFTLAAYEDPQPVPGL---------EDITDDVGD------SKNAVEAPVQGPMEEIYSTS 442
G+ L Y +PQ VPGL +D +V D ++ VE EE +S
Sbjct: 302 GYGLTEYHEPQSVPGLEDKNNDDDDDDEEKNVNDGLQWRAKRSRVEEVAALDHEE---SS 358
Query: 443 PLSPKIGDSSGLSGNRLSHRRKQKSIAEII 472
L + SG +RL HRRK+KSI EII
Sbjct: 359 SLQRSLEKCSGFPDHRLPHRRKEKSITEII 388
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 28/168 (16%)
Query: 750 AEIFVSFWPGSTLPSRSDVITAFSKYGALNEAETNMFKTNFTARVSFLRASDAEEALRHA 809
AE++V+F PGS+LP + D+I + K+GAL++ T+ NF+A V+FL +D E+A +
Sbjct: 864 AELYVTFGPGSSLPKKEDLIEIYEKFGALDKERTDTVDNNFSAHVAFLDVADGEKAFESS 923
Query: 810 ENKNPFES-CEVTYDIQYPSEGSKSLGHVERSKSRHLLAKEKGKAPATPTVSLSQANEAA 868
K PF S V + ++YP+ ER++ + ++A A
Sbjct: 924 LEKCPFTSNSTVKFRLKYPN---------ERTEEKK-----------------TEAEVAE 957
Query: 869 DKVNLNFIKQKLQGLASMLETAD-GTSPDFKTKVESEVKGLLEDVNKM 915
+ + ++K+KL + +L+ + G + + K K+E E+ LLE V +M
Sbjct: 958 TTMEVEYLKKKLDEMKLLLDGCEGGMTEEVKVKLEGEMVNLLEKVIEM 1005
>AT3G27860.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:10326128-10328086 FORWARD LENGTH=652
Length = 652
Score = 176 bits (447), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 125/199 (62%), Gaps = 9/199 (4%)
Query: 220 GFSVGDFVWGK-IKSHPWWPGRIYDPFDASDAALKLQQKNRLLVAYFGDGT-FAWCHPSQ 277
GF VGDFVWG+ S WWPG+IYD DASD ALK QK +LLVAYFGDG+ F WC+P +
Sbjct: 60 GFHVGDFVWGEEANSQQWWPGQIYDSLDASDLALKTMQKGKLLVAYFGDGSFFGWCNPLE 119
Query: 278 LKPFEENFIDMVKQSSSKAFVNAVQEAVSEVGRLLYVKMSHSLVAEKTKSELTPPLVNNF 337
LKPF ENF + K S S+ F+ AV++AV E+G + LV + + L + N
Sbjct: 120 LKPFLENFKEFSKMSDSRRFLLAVEDAVREIGE----HVEKFLVCD--DAALVSSVALNL 173
Query: 338 GIKKGVLVPDGGIERLSGFPIE-PAELLSQVKHIAEIIATASILELEMLKARLSVFYLSR 396
GIK GV+VPD + +S +E P +L VK +A + +LE+E+L+ ++S FY +
Sbjct: 174 GIKDGVVVPDVRRKIISSLVLENPGVVLEDVKRLAMTVRFDDLLEIEVLRRKISAFYRCK 233
Query: 397 GGFTLAAYEDPQPVPGLED 415
G F LA +++ + + GLED
Sbjct: 234 GRFDLAKFDEHRYIIGLED 252
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 157/361 (43%), Gaps = 116/361 (32%)
Query: 578 RERKKSKYLSPPFTT--SIRGLK-----------QVARETETPEKXXXXXXYQTQDDENK 624
RERKKSKYLSP + T S R K QVA TP N
Sbjct: 385 RERKKSKYLSPEYMTDFSCRARKIKIESAESSQIQVAVRMTTP---------------NT 429
Query: 625 TIDLKKIEYPSEDVLSEIWYAAISPQNPR--GSTSDDKFDDFISVFRSSLYREGSLYEAF 682
ID+ K+ E++L+ I AA++ Q P+ STS D +F+S +RS F
Sbjct: 430 AIDVVKLGATPEEMLALIRAAALNAQYPKDYNSTSCDMVREFVSNYRS-----------F 478
Query: 683 NELRPGSKRKNPESELGVLRKDQNLSDHESPYDSAPAKRRKETAPSMSRGKRAPETGKKG 742
N R NLSD E + PE ++
Sbjct: 479 NNKR-------------------NLSDVE----------------------KQPEVKQEI 497
Query: 743 SDEKAQS-----AEIFVSFWPGSTLPSRSDVITAFSKYGALNEAETNMFKTNFTARVSFL 797
DEK ++ E+++ GSTLPS+ D+I + K+GAL++ + MF N + V+F+
Sbjct: 498 VDEKEKTRNEPGVELYIKTGFGSTLPSKDDLIKTYEKFGALDKERSYMFNNNSCSCVAFV 557
Query: 798 RASDAEEALRHAENKNPFESCE-VTYDIQYPSEGSKSLGHVERSKSRHLLAKEKGKAPAT 856
ASD EEA + K PF + VT+ ++YPS S EK +A
Sbjct: 558 NASDGEEAFNRSLEKCPFATTSTVTFKLEYPSSASS----------------EKKEAETR 601
Query: 857 PTVSLSQANEAADKVNLNFIKQKLQGLASMLETADG-TSPDFKTKVESEVKGLLEDVNKM 915
V+ + +K+KL+G+ ++L+ ++G + + K K+E E + LL+ V KM
Sbjct: 602 KGVT-----------EIECLKEKLEGIRALLDQSEGKITEELKMKLEDESRNLLDKVRKM 650
Query: 916 V 916
+
Sbjct: 651 I 651
>AT5G02950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:690953-692851 FORWARD LENGTH=632
Length = 632
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 103/179 (57%)
Query: 214 LSDEGYGFSVGDFVWGKIKSHPWWPGRIYDPFDASDAALKLQQKNRLLVAYFGDGTFAWC 273
S E D VW K++S+PWWPG ++D AS AA++ +K +LVAYFGD TFAW
Sbjct: 88 FSKENLKLFDSDLVWAKLRSYPWWPGLVFDKSVASKAAMRHFKKGNVLVAYFGDCTFAWN 147
Query: 274 HPSQLKPFEENFIDMVKQSSSKAFVNAVQEAVSEVGRLLYVKMSHSLVAEKTKSELTPPL 333
+ SQ+KPF +NF M +QS+S F +A+ A+ EV R + +S S V+E+ ++L
Sbjct: 148 NASQIKPFHQNFSQMQEQSNSAEFRDAIDCALDEVSRRVEFGLSCSCVSEEAYNKLKTQN 207
Query: 334 VNNFGIKKGVLVPDGGIERLSGFPIEPAELLSQVKHIAEIIATASILELEMLKARLSVF 392
+ N GI++ V GG + G EPA+L+ +KH+A + +L+ + R V
Sbjct: 208 IINAGIREDSSVRYGGDKLSDGISFEPAKLVDYMKHLACFPCYDATEKLQFVINRAQVL 266
>AT3G09670.2 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:2966637-2968817 FORWARD LENGTH=726
Length = 726
Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 101/181 (55%), Gaps = 1/181 (0%)
Query: 221 FSVGDFVWGKIKSHPWWPGRIYDPFDASDAALKLQQKNRLLVAYFGDGTFAWCHPSQLKP 280
S D VW K++SHPWWPG+++D A+D A K +K LV YFGD TFAW S++KP
Sbjct: 197 ISDSDLVWAKVRSHPWWPGQVFDASAATDKAKKHFKKGSFLVTYFGDCTFAWNEASRIKP 256
Query: 281 FEENFIDMVKQSSSKAFVNAVQEAVSEVGRLLYVKMSHSLVAEKTKSELTPPLVNNFGIK 340
F ++F M KQSS F++A+ A+ EV R + ++ S ++E+ ++ V N GI+
Sbjct: 257 FRQHFSQMAKQSSLPDFIDAIDFALEEVSRRIEFGLACSCISEEVYQKIKTQNVINPGIR 316
Query: 341 KGVLVPDGGIERLSGFPIEPAELLSQVKHIAEIIATASILELEMLKARLSVFYLSR-GGF 399
+ GG + S EPA L+ VK +A + + L+++ R + +R G+
Sbjct: 317 EDSSSIHGGDKVSSAVFFEPANLVGYVKRLACSPSYDATDALQLVSQRAQLLAFNRWKGY 376
Query: 400 T 400
T
Sbjct: 377 T 377
>AT3G09670.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:2966637-2968817 FORWARD LENGTH=726
Length = 726
Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 101/181 (55%), Gaps = 1/181 (0%)
Query: 221 FSVGDFVWGKIKSHPWWPGRIYDPFDASDAALKLQQKNRLLVAYFGDGTFAWCHPSQLKP 280
S D VW K++SHPWWPG+++D A+D A K +K LV YFGD TFAW S++KP
Sbjct: 197 ISDSDLVWAKVRSHPWWPGQVFDASAATDKAKKHFKKGSFLVTYFGDCTFAWNEASRIKP 256
Query: 281 FEENFIDMVKQSSSKAFVNAVQEAVSEVGRLLYVKMSHSLVAEKTKSELTPPLVNNFGIK 340
F ++F M KQSS F++A+ A+ EV R + ++ S ++E+ ++ V N GI+
Sbjct: 257 FRQHFSQMAKQSSLPDFIDAIDFALEEVSRRIEFGLACSCISEEVYQKIKTQNVINPGIR 316
Query: 341 KGVLVPDGGIERLSGFPIEPAELLSQVKHIAEIIATASILELEMLKARLSVFYLSR-GGF 399
+ GG + S EPA L+ VK +A + + L+++ R + +R G+
Sbjct: 317 EDSSSIHGGDKVSSAVFFEPANLVGYVKRLACSPSYDATDALQLVSQRAQLLAFNRWKGY 376
Query: 400 T 400
T
Sbjct: 377 T 377
>AT5G27650.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:9785511-9789094 FORWARD LENGTH=1072
Length = 1072
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 219 YGFSVGDFVWGKIKSHPWWPGRIYDPFDASDAALKLQQKNRLLVAYFGDGTFAWCHPSQL 278
YGF VGD VWGK+KSHPWWPG I++ AS + ++++ + +LVA+FGD ++ W P++L
Sbjct: 169 YGFEVGDLVWGKVKSHPWWPGHIFNEAFASPSVRRMRRIDHVLVAFFGDSSYGWFDPAEL 228
Query: 279 KPFEENFIDMVKQSSSKAFVNAVQEAVSEVGRLLYVKMSHSLVAEKTKSELTPPLVNNFG 338
PFE N + +Q+ SK FV AV+EA E R + ++ + P V ++
Sbjct: 229 IPFEPNLEEKSQQTVSKHFVRAVEEAKDEASRRSALGLTCKC---RNPYNFRPSNVEDYF 285
Query: 339 IKKGVLVPDGGIERL--------SGFPIEPAELLSQVKHIAEIIATASILELEMLKARLS 390
V VPD ++ + S PAE +S VK +A L+ +K +
Sbjct: 286 ---AVDVPDYELQAVYSVDQIKNSRDKFLPAETISFVKQLALAPQECDPDSLKFMKKKAV 342
Query: 391 VFYLSRGGF 399
VF + F
Sbjct: 343 VFAFRKSVF 351
>AT3G05430.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:1567745-1571037 FORWARD LENGTH=965
Length = 965
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 67/92 (72%)
Query: 219 YGFSVGDFVWGKIKSHPWWPGRIYDPFDASDAALKLQQKNRLLVAYFGDGTFAWCHPSQL 278
YGF VGD VWGK+KSHPWWPG+I++ AS + ++++ +LVA+FGD ++ W P++L
Sbjct: 131 YGFEVGDMVWGKVKSHPWWPGQIFNEAFASPSVRRVKKMGYVLVAFFGDNSYGWFDPAEL 190
Query: 279 KPFEENFIDMVKQSSSKAFVNAVQEAVSEVGR 310
PFE + + +Q+SS F AV+EA++EVGR
Sbjct: 191 IPFEPHVKEKSQQTSSDHFAKAVEEAMNEVGR 222
>AT3G48190.1 | Symbols: ATM, ATATM | ataxia-telangiectasia mutated |
chr3:17797628-17828361 FORWARD LENGTH=3845
Length = 3845
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 24/183 (13%)
Query: 216 DEGYGFSVGDFVWGKIKSHPWWPGRIYDPFDASDAALKLQQKNRLLVAYFGDGTF-AWCH 274
DE F VG+ VW K WWPG + D K K +V G +W
Sbjct: 101 DETQEFLVGNLVWVMTKYKKWWPGEVVD--------FKADAKESFMVRSIGQSHLVSWFA 152
Query: 275 PSQLKPFEENFIDMVKQSSSKAFVNAVQEAVSEVGRLLYVKMSHSLVAEKTKSELTPPLV 334
S+LKPF+E+F ++ Q + F +A+Q+A+S + L + M+ S +A+ +V
Sbjct: 153 SSKLKPFKESFEQVLNQRNDNGFFDALQKAMSLLSNSLKLDMTCSCIADGNG------IV 206
Query: 335 NNFGI----KKGVLVPDGGIERLSGFPIEPAELLSQVKHIAEIIATASILELEMLKARLS 390
+ I K +++ + ++RL EP E ++Q+K+IA+ + A +LE +++++LS
Sbjct: 207 SAQNITTRKNKPLILREFSVDRL-----EPKEFVTQLKNIAKCVLNAGVLESTVMQSQLS 261
Query: 391 VFY 393
FY
Sbjct: 262 AFY 264
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 20/162 (12%)
Query: 752 IFVSFWPGSTLPSRSDVITAFSKYGALNEAETNMFKTNFTARVSFLRASDAEEALRHAEN 811
+F+ F ++PSR D+ + FS +G L+ +ET++ + A+V+F+ ++DA EA++ E
Sbjct: 691 LFLKFSSQVSMPSRDDLTSTFSAFGPLDSSETHVSEEFSGAQVAFVSSADAIEAVKSLEK 750
Query: 812 KNPFESCEVTYDIQYPSEGSKSLGHVERSKSRHLLAKEKGKAPATPTVSLSQANEAADKV 871
NPF V + +Q + L+ ++ AP P +S + +
Sbjct: 751 ANPFGETLVNFRLQ-----------------QKLITVQRNIAPRMPVISHVSPVPKPNNI 793
Query: 872 --NLNFIKQKLQGLASMLE-TADGTSPDFKTKVESEVKGLLE 910
+++ ++Q L + +MLE + D S + K K++SE+ GLLE
Sbjct: 794 PTSMDAMRQNLLMMTAMLEKSGDSLSRETKAKLKSEITGLLE 835