Miyakogusa Predicted Gene

Lj2g3v0948370.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0948370.1 tr|I1K1I6|I1K1I6_SOYBN Isocitrate dehydrogenase
[NADP] OS=Glycine max PE=3 SV=1,93.13,0,nadp_idh_euk: isocitrate
dehydrogenase, NADP-depen,Isocitrate dehydrogenase NADP-dependent;
Isocitra,CUFF.35838.1
         (233 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14590.1 | Symbols:  | Isocitrate/isopropylmalate dehydrogena...   418   e-117
AT1G65930.1 | Symbols: cICDH | cytosolic NADP+-dependent isocitr...   394   e-110
AT1G54340.1 | Symbols: ICDH | isocitrate dehydrogenase | chr1:20...   377   e-105

>AT5G14590.1 | Symbols:  | Isocitrate/isopropylmalate dehydrogenase
           family protein | chr5:4703533-4706627 REVERSE LENGTH=485
          Length = 485

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 195/233 (83%), Positives = 213/233 (91%)

Query: 1   MYNVDESIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGRFKDIFQEVYEERWKHKFEE 60
           MYNVDESIRAFAESSM++A  KKWPLYLSTKNTILKKYDGRFKDIFQEVYE  WK KFEE
Sbjct: 253 MYNVDESIRAFAESSMAMALTKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKQKFEE 312

Query: 61  HSIWYEHRLIDDMVAYELKSEGGYVWACKNYDGNVQSDLLAQGFGSLGLMASVLLSSDGK 120
           HSIWYEHRLIDDMVAY +KSEGGYVWACKNYDG+VQSDLLAQGFGSLGLM SVLLS+DGK
Sbjct: 313 HSIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSADGK 372

Query: 121 TLEAEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLDNNEKLRDFTHKLEA 180
           TLE+EAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLD NEKL DF  KLE+
Sbjct: 373 TLESEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLDKNEKLMDFVKKLES 432

Query: 181 ACVETVESGKMTKDLAILVHGSKVSREFYLNTEEFVDAVAHNLERKLQEPSVV 233
           +CV TVE+GKMTKDLA+L+HG KVSR+ +LNTEEF+DAVA  L+ + +E  +V
Sbjct: 433 SCVNTVETGKMTKDLALLIHGPKVSRDLFLNTEEFIDAVASKLKTQFKELPLV 485


>AT1G65930.1 | Symbols: cICDH | cytosolic NADP+-dependent isocitrate
           dehydrogenase | chr1:24539088-24541861 FORWARD
           LENGTH=410
          Length = 410

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 184/228 (80%), Positives = 203/228 (89%)

Query: 1   MYNVDESIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGRFKDIFQEVYEERWKHKFEE 60
           MYN DESIRAFA++SM+ A+ KKWPLYLSTKNTILKKYDGRFKDIFQEVYE  WK K++ 
Sbjct: 182 MYNTDESIRAFADASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKYDA 241

Query: 61  HSIWYEHRLIDDMVAYELKSEGGYVWACKNYDGNVQSDLLAQGFGSLGLMASVLLSSDGK 120
             IWYEHRLIDDMVAY LKSEGGYVWACKNYDG+VQSD LAQGFGSLGLM SVL+  DGK
Sbjct: 242 AGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK 301

Query: 121 TLEAEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLDNNEKLRDFTHKLEA 180
           T+EAEAAHGTVTRHFR+HQKG ETSTNSIASIFAWTRGL HRAKLD+N KL DFT KLEA
Sbjct: 302 TIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLEA 361

Query: 181 ACVETVESGKMTKDLAILVHGSKVSREFYLNTEEFVDAVAHNLERKLQ 228
           ACV TVESGKMTKDLA+++HGSK+SR+ YLNTEEF+DAVA  L+ +L 
Sbjct: 362 ACVGTVESGKMTKDLALIIHGSKLSRDTYLNTEEFIDAVAAELKERLN 409


>AT1G54340.1 | Symbols: ICDH | isocitrate dehydrogenase |
           chr1:20283520-20286506 FORWARD LENGTH=416
          Length = 416

 Score =  377 bits (969), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 176/227 (77%), Positives = 199/227 (87%)

Query: 1   MYNVDESIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGRFKDIFQEVYEERWKHKFEE 60
           MYN DESIRAFAESSM  A+ KKWPLYLSTKNTILK YDGRFKDIFQEVYE  W+ K+E 
Sbjct: 183 MYNTDESIRAFAESSMYTAYQKKWPLYLSTKNTILKIYDGRFKDIFQEVYEANWRSKYEA 242

Query: 61  HSIWYEHRLIDDMVAYELKSEGGYVWACKNYDGNVQSDLLAQGFGSLGLMASVLLSSDGK 120
             IWYEHRLIDDMVAY +KSEGGYVWACKNYDG+VQSD LAQG+GSLG+M SVL+  DGK
Sbjct: 243 AGIWYEHRLIDDMVAYAMKSEGGYVWACKNYDGDVQSDFLAQGYGSLGMMTSVLVCPDGK 302

Query: 121 TLEAEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLDNNEKLRDFTHKLEA 180
           T+EAEAAHGTVTRH+R+HQKG ETSTNSIASIFAW+RGL HRAKLD+N  L  +T KLEA
Sbjct: 303 TIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDSNAALLSYTEKLEA 362

Query: 181 ACVETVESGKMTKDLAILVHGSKVSREFYLNTEEFVDAVAHNLERKL 227
           AC+ TVESGKMTKDLA+L+HG+KV R+ Y+NTEEF+DAVA  L+R+L
Sbjct: 363 ACMGTVESGKMTKDLALLIHGAKVRRDQYVNTEEFIDAVAWELKRRL 409