Miyakogusa Predicted Gene

Lj2g3v0932700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0932700.1 Non Chatacterized Hit- tr|B9S651|B9S651_RICCO RNA
binding protein, putative OS=Ricinus communis
GN=R,61.36,0,Invasin/intimin cell-adhesion fragments,Invasin/intimin
cell-adhesion; Big_2,Bacterial Ig-like, grou,CUFF.35787.1
         (1957 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40480.1 | Symbols: EMB3012 | embryo defective 3012 | chr5:16...  2080   0.0  

>AT5G40480.1 | Symbols: EMB3012 | embryo defective 3012 |
            chr5:16213361-16223982 FORWARD LENGTH=1923
          Length = 1923

 Score = 2080 bits (5388), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1052/1938 (54%), Positives = 1342/1938 (69%), Gaps = 48/1938 (2%)

Query: 28   SGPHIADVNLLLPPKMTFPVEYRLQGSDGCFTWSWDHHDILSVLPEYNSSNKCSTSARLR 87
            SGPHI DVN+LLPPKM  PVEYRLQGSDGCF WSWDHHDILSV PE+NSS+ CSTSARLR
Sbjct: 26   SGPHITDVNILLPPKMKNPVEYRLQGSDGCFKWSWDHHDILSVTPEFNSSSHCSTSARLR 85

Query: 88   SIAPYSGRKETAVYAADVKTGTVIRCKVFIDNISRIQIFHNSIKLDLDGLATLHVRAFDN 147
            SI+PYSGRKETAVYA D++TG VIRCKVFIDN SRIQIFHNSIKLDLDGL+ L VRAFDN
Sbjct: 86   SISPYSGRKETAVYATDIQTGMVIRCKVFIDNFSRIQIFHNSIKLDLDGLSMLRVRAFDN 145

Query: 148  EENVFSSLVGLQFMWSLMPEANGSPHHIVNVPLKDSPLSDCGGLCGDLDIQIKLEDSGVF 207
            E+N FSSLVGLQF+W LMPE+ GS HH+ +VPLK+SPL+DCGGLCG LDIQ KLEDSGVF
Sbjct: 146  EDNEFSSLVGLQFIWKLMPESGGSTHHLAHVPLKESPLTDCGGLCGYLDIQKKLEDSGVF 205

Query: 208  SDLFVVKGTEIGHETVSVHLLEPQSKKLADEIVLTVAEAMSLSPPSPVFVLVGSVIPYSL 267
            +DLFVVKGT+IGHE VSVHLLE     +ADEIVLTVAEAMSL P SPV+VL+G+   Y+L
Sbjct: 206  ADLFVVKGTKIGHEKVSVHLLEAPLTHIADEIVLTVAEAMSLEPRSPVYVLMGASFGYTL 265

Query: 268  KVIRGNVPQVVSLPSPHHLWSVSNASVAQVDSKTGLAYAWNLGMTAVIVEDTRVAGHLQV 327
            KV+RGNVPQ V LPSPHH WSV N+SVAQVDS  GL  A +LG+T V+VEDTRVAGH+Q 
Sbjct: 266  KVMRGNVPQAVDLPSPHHRWSVLNSSVAQVDSLIGLTKALSLGVTTVVVEDTRVAGHIQG 325

Query: 328  SSLNVVXXXXXXXXXXXXXXXXXXVEGIKSIPLMARWYVVSGHQYLIQLKVFAHGHDTQE 387
            SS+NVV                  +   K  P    WYVVSG QYLIQ+K+F+   D  E
Sbjct: 326  SSINVVTPDTLILYISPWSMSGDLITESKPFPSSMHWYVVSGRQYLIQMKIFSGRPDAHE 385

Query: 388  IYITEKDDVKVYDDQSDYWRTSWVSNDIALKHGWRNSKILEAYSPGLGKLTASLSYPGGA 447
            IYITE DD+K+Y   SDYW+   + ++++ ++G RNS+IL A SPGLG+LT++L+Y  G 
Sbjct: 386  IYITETDDIKLYGKDSDYWKIVSLPDELSSEYGQRNSRILNAISPGLGELTSTLTYFSGH 445

Query: 448  DDRKEIIKVVQEVMVCDQVKFTLDNESGV--VLLPWVPGVYQDVELKAIGGCAKTVSDYK 505
             + KE++KVVQE+ VC++V+FTL++E     VLLPW P VYQ++EL   GGCAK  SDYK
Sbjct: 446  QESKEVLKVVQEIRVCEKVQFTLNSEDDTPKVLLPWTPAVYQEMELIVTGGCAKASSDYK 505

Query: 506  WLXXXXXXXXXXXXGIVQAKKPGKATIKVLSVYDSLNYDEVLVEVSIPASMVMLHNFPVE 565
            W             GI+QAK+PG AT+KV+S +DS N+DEV+VEVSIP+SMVML NFPVE
Sbjct: 506  WFTSDISILSVSAYGIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQNFPVE 565

Query: 566  TVVGSHLQAAVTMKAVNGAFFYRCDAFNSLIKWKTGSESFVIVNATQELSYLETAPYSQL 625
            TVVGSHL+AAVTMKA+NGA F RCDAFNSLIKWKTGSESFVIVNAT E+  L+     +L
Sbjct: 566  TVVGSHLKAAVTMKALNGATFSRCDAFNSLIKWKTGSESFVIVNATSEMMMLD-----EL 620

Query: 626  HPSADDFPCSWTHIYASNPSQAVIHAILSKEHNQYGLG---PVVLKASLRIAAYQPLVVY 682
                   PCS   IY ++  + V+ A L+KE + +       + LKA+L I AY PL V 
Sbjct: 621  RSMDSSPPCSRASIYTASTGRTVLQATLAKEFHYFDKSLSESIDLKATLTIGAYLPLSVR 680

Query: 683  QAGDGNHFGGYWFDSAQADDNKLSHSLEELYLVPGTYLDLLLFGGPERWDKGVNFTETVE 742
            Q  DGNH GGYWFD AQ + +     + +LYLVPGTY+D++L GGPERWD  V FTETV+
Sbjct: 681  QDSDGNHHGGYWFDKAQEETD---FGVSKLYLVPGTYVDVMLLGGPERWDDNVEFTETVK 737

Query: 743  VLDEENALAEDGLLVHRVSDDYRTSYGILCQTLGTFKLLFKRGNLVGDDHPLPSVAEARL 802
             L E+       + VH   D     Y I CQ LG++KL+F RGNL+G DHP+P+VAEA L
Sbjct: 738  TLYEDEEDLTSRVNVHHEVDRRANMYRISCQKLGSYKLVFLRGNLLGIDHPVPAVAEALL 797

Query: 803  SVICTIPSSIVLLADEPVNXXXXXXXXXXXXXTSGRLRDAPVTVANGRIIRITAAGISDS 862
            SV C++PSS+VL+ DEPVN               GRLR  PVTVANG+IIR+ A GIS+ 
Sbjct: 798  SVHCSLPSSVVLIVDEPVNKLDVIRAASQADRAPGRLRVTPVTVANGQIIRVAAVGISEF 857

Query: 863  GEAFANXXXXXXXXXXXXCDGLAYWDYAFDT-VKSNNWERFLVLQNESGLCVVRATVTGF 921
            GEAF+N            C+ LAYWD  +++ +  + WERFL L+NESGLC VRATV+G 
Sbjct: 858  GEAFSNSSTLSLRWELTSCNNLAYWDDDYNSKMTKSGWERFLALRNESGLCTVRATVSGI 917

Query: 922  LDSFRDDTFHQFSQ-AENVLTDAIRLQLVSTLRVDPEFNLIYFNPNAKVNLSITGGSCFL 980
              SF+        Q +E+ LTDA+RLQLVSTLRV PEFNL++FNPNAKVNLS+TGGSC  
Sbjct: 918  DYSFKSQYSTLLPQGSESTLTDAVRLQLVSTLRVTPEFNLVFFNPNAKVNLSMTGGSCLW 977

Query: 981  EALTNDSQVVEVIQPPSGLECLQLILSPKGLGIANLTLYDVGLTPPLRASALVQVADIDW 1040
            EA+ N+S+V EVI+PPSGL+C Q++LSPKGLG   +T+YD+G++PPL A AL++VAD+DW
Sbjct: 978  EAVVNNSRVAEVIRPPSGLQCSQMMLSPKGLGTTIVTVYDIGVSPPLSALALIKVADVDW 1037

Query: 1041 IKIKSGEEISLMEGSLQTIYLTAGTNGGNSFHSSQFVYMNLHVNVEDSIIELVDTDNFSS 1100
            IKI SG+EIS+MEGS  +I L  G + G +F SSQ+  M++ V++ED ++E V  D  S 
Sbjct: 1038 IKIASGDEISIMEGSTHSIDLLTGIDDGMTFDSSQYSLMDIMVHIEDDLVEHVTVDEDSL 1097

Query: 1101 LVGGHVNAASFKIKGTHLGITTLYVSTIQHFGHVIQSQAIKVEVYKAPRIHPHDIFLLPG 1160
             VG HV  +SFKI    LGITTLYVS  Q  G  + SQ IKVEVY  PR+HP  IFL+PG
Sbjct: 1098 SVGEHVATSSFKIAARRLGITTLYVSARQQSGGKVLSQTIKVEVYSPPRLHPQGIFLVPG 1157

Query: 1161 ASYVFTMEGGPTLSGHVEYAIENDKIASIDKYSGRLSAVALGNTTILASVFVKGNTVICD 1220
            ASYV T+EGGPT++  V+Y   ++++A I+K SGRL A + GNTTI A+++     VIC 
Sbjct: 1158 ASYVLTIEGGPTMNVSVDYTTVDNEVAKIEK-SGRLYATSPGNTTIYATIYGSEGAVICQ 1216

Query: 1221 ARSTLRVGIPSTITLHTQSEQLGVGRTLPIYPLFPEGNLFSFYELCKNYKWTIDDEKVLS 1280
            A     VG+P+T  L  QS+ + VG  +P+ P FPEG+L SFYELC  YKWTI+DEKVL 
Sbjct: 1217 AIGNAEVGLPATAMLVAQSDTVAVGHEMPVSPSFPEGDLLSFYELCSAYKWTIEDEKVLI 1276

Query: 1281 FKVTESLHVDKYGIQFTASEESQVTGYFDENDFGFINVLHGRSAGKTNVTVSFSCELSNF 1340
            F +  S++V                    E + GF+NV+ GRSAGKT VT++FSC+  + 
Sbjct: 1277 F-IASSINV--------------------EENAGFVNVVQGRSAGKTRVTIAFSCDFVSP 1315

Query: 1341 GSKTQSKFYSSSLSVTVVPDLPLALGVPITWIXXXXXXXXXXXXXXXXXXXQYDSPNRKG 1400
            G  ++S+ Y +S+ ++VVPDLPL+LG P+TW+                     D  + +G
Sbjct: 1316 GLYSESRTYEASMILSVVPDLPLSLGAPMTWVLPPFYTSSGLLPSSSEPQKHRDGQSHRG 1375

Query: 1401 TIKYSLLRSLEKNAALQNDAIFIDGDRIKTAESNALACIQANDRITGRIEIASCVKVAEV 1460
             I YS+L+     A  + D I I+G  +KT +SN +ACIQA DR +GRIEIA+CV+VAEV
Sbjct: 1376 NIVYSILKDCSSRADFERDTISINGGSVKTTDSNNVACIQAKDRTSGRIEIAACVRVAEV 1435

Query: 1461 TQIRIASKEVLLKVIDLAVGAELDLPTTFYDALGSPFYEAYNALPFFAETNYPDVLYINK 1520
             QIR+ S+ +   VIDLAVG EL+LP  +YD LG PF EA+    +  ETN+ DV++I K
Sbjct: 1436 AQIRMKSEGIPFHVIDLAVGGELELPINYYDTLGIPFLEAHGVTTYNVETNHRDVVFI-K 1494

Query: 1521 TSDGKGNVHIKAIRHGKALVRMTISDAPQKSDYMLIRVGAQIYPPNPVLHIGSPLNLSIK 1580
            T + + + +IK I+HGKAL+R++I D  +KSDY+L+ VGA I+P NPV+H G+ LN SI 
Sbjct: 1495 TVNDQPSAYIKGIKHGKALIRVSIGDNLRKSDYVLVSVGAHIFPQNPVIHTGNLLNFSIT 1554

Query: 1581 GLSDKVSGHWSTTNGSVISVDPLSGVAKVTGEGSAQVSFHYAKSKLQTTITVLKGDSVSV 1640
            G  ++V+G W T+N SVISV+  SG AK   +GS  V+F     KLQT +TVL G+++ V
Sbjct: 1555 GADNEVTGQWFTSNRSVISVNVASGQAKAISQGSTHVTFKGHGLKLQTKVTVLFGNTIYV 1614

Query: 1641 DAPKGMLTNVPYPAKGYNFSVKFSNTYGERLGAAGGNKRISFDCRVDPPFVGYVKPWLDL 1700
            D+P   LTNV  PA+GY F VKF      +        + +F+C+VDPPF+GY KPW+DL
Sbjct: 1615 DSPGETLTNVHVPAEGYKFPVKFRE---NKFAVTEHGNKATFNCQVDPPFIGYTKPWMDL 1671

Query: 1701 DSGNSYCLFFPHSPEHLVHSAPKLEGMRPDVSLSIYASLKEHEHVSGSASTLFIGGFSLM 1760
            D+GN+YCLFFP+SPEHLVHS    + M+P VS S+ ASLKE   VSGSAS L IGGFS+ 
Sbjct: 1672 DTGNTYCLFFPYSPEHLVHSMSITKDMKPHVSFSVDASLKEARRVSGSASALLIGGFSV- 1730

Query: 1761 EMGKSPMQLNLTPGSNKTYMTILGNTDVEIHWRYRDLIMISAIQKEDFGLRGFAQYEVKL 1820
                 P +LN+ P SN T ++++GNTDV+IH R +  + IS I+++DFG+ G AQY+V +
Sbjct: 1731 ---TGPDKLNINPDSNTTIISLVGNTDVQIHCRNKGRLSISLIKRDDFGIAGHAQYKVNV 1787

Query: 1821 LKAKRFKDKITITLPANGQGLEIDISYEPEPEETVLPSVPINKTLWAXXXXXXXXXXXXX 1880
            L++++F D+I ITLPA GQ +EID+ Y  +  E+++ S     ++               
Sbjct: 1788 LRSEQFTDRIIITLPATGQIVEIDVCY--DTGESLVASSKDGYSVLLKILWGVLVLVVSV 1845

Query: 1881 XXXXXXXDRPDRSQQTSAPVTASIGAPTTPERSSPGVP-NEMSPRTPQPFVDYVRRTIDE 1939
                   DR   +  T     +   A  TPER S  V  +E SPRTP PF++YV+RT+DE
Sbjct: 1846 IILMKVIDRQVPTGATGTATYSGNAAQGTPERRSGTVIYHEESPRTPSPFMEYVKRTVDE 1905

Query: 1940 TPYYKREGRRRVNPQNTF 1957
            TPYY+REGRRR NPQNT 
Sbjct: 1906 TPYYRREGRRRFNPQNTM 1923