Miyakogusa Predicted Gene
- Lj2g3v0922620.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0922620.1 tr|A9U4E2|A9U4E2_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,31.79,2e-18,seg,NULL; no description,Armadillo-like helical;
BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING,NU,CUFF.35778.1
(330 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G14510.1 | Symbols: | ARM repeat superfamily protein | chr5:... 323 8e-89
AT4G12710.1 | Symbols: | ARM repeat superfamily protein | chr4:... 196 2e-50
AT3G03440.1 | Symbols: | ARM repeat superfamily protein | chr3:... 130 1e-30
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 109 3e-24
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 109 3e-24
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 109 3e-24
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 108 3e-24
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 103 2e-22
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 99 3e-21
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 96 5e-20
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 92 7e-19
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 92 7e-19
AT2G25130.1 | Symbols: | ARM repeat superfamily protein | chr2:... 87 1e-17
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 86 5e-17
AT4G31890.2 | Symbols: | ARM repeat superfamily protein | chr4:... 84 2e-16
AT4G31890.1 | Symbols: | ARM repeat superfamily protein | chr4:... 84 2e-16
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 75 5e-14
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 75 6e-14
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 74 1e-13
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 74 2e-13
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 72 4e-13
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 67 2e-11
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 61 1e-09
AT5G62560.1 | Symbols: | RING/U-box superfamily protein with AR... 60 2e-09
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 56 3e-08
AT2G27430.1 | Symbols: | ARM repeat superfamily protein | chr2:... 53 3e-07
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 52 4e-07
AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 | chr3:17644434-17... 48 1e-05
>AT5G14510.1 | Symbols: | ARM repeat superfamily protein |
chr5:4678125-4679194 REVERSE LENGTH=327
Length = 327
Score = 323 bits (829), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 174/331 (52%), Positives = 238/331 (71%), Gaps = 5/331 (1%)
Query: 1 MEKVVVQNLWNGDEEAQIQAAMELSGLCSKQRHNLAESGIMVPLVSMLYSENYEAVEASL 60
ME++VV++L +G+ E+QI+AA+EL+ L KQR LAE I+ PL+SML S++ E +L
Sbjct: 1 MEEIVVESLLSGNRESQIEAAIELTNLSRKQRQKLAEREIISPLLSMLQSQDCITTEVAL 60
Query: 61 CALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVV-QLTIAAMLTLSSCKANKIAIA 119
AL+S+AFGSERNK+RI+KSG +P LL +L +++ VV +L +A +L LSSC NK+ +A
Sbjct: 61 SALLSLAFGSERNKVRIVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKMA 120
Query: 120 SSGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVK 179
S+ VQ LV + + Q+++D IATL NL+T QIVPL+++SG +LL++I+ K
Sbjct: 121 STRLVQLLVGLIGLDRLTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVINFCDK 180
Query: 180 SSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQ 239
SS L +KA+ LLEN++ GAI +LVE IE+GS+ KEHAV ILL IC
Sbjct: 181 SSELADKAVALLENIISHSPESVSSIG---GAIGVLVEAIEEGSAQCKEHAVGILLGICN 237
Query: 240 SCREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCASNYSSRGRQINHDLI 299
+ RE RG+IL EGVMPGLLQ+SVDGTRRAK MARELLLLLRDC S Y + +Q +++
Sbjct: 238 NDRETNRGMILREGVMPGLLQVSVDGTRRAKEMARELLLLLRDC-SGYVIKNKQSKIEIV 296
Query: 300 ERIMEEIDAEGEKLADTTLRLVEEMIAKLNT 330
E+IM EID EGE++ T L+LVEEMI+KL+T
Sbjct: 297 EQIMREIDQEGERIPGTMLKLVEEMISKLST 327
>AT4G12710.1 | Symbols: | ARM repeat superfamily protein |
chr4:7485040-7486733 REVERSE LENGTH=402
Length = 402
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 194/330 (58%), Gaps = 16/330 (4%)
Query: 7 QNLWNGDEEAQIQAAMELSGLCSKQ------RHNLAESGIMVPLVSMLYSENYEAVEASL 60
+ L +GD + +I+AA E+ L K R LA++G++ PLV ML+S N +A ASL
Sbjct: 52 KKLLHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSSNVDARHASL 111
Query: 61 CALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIAS 120
AL+++A +ERNKI I+K+G +P L+ +L + ++ +L AA+LTLS+ ANK I S
Sbjct: 112 LALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPANKAMIIS 171
Query: 121 SGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKS 180
SG L++ ++S + Q ++DA+ LHNL+ C++ I+ + L+ L+ K
Sbjct: 172 SGVPPLLIQMLSS--GTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKKH 229
Query: 181 SSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQS 240
S EKA L+E ++ I LVET+EDGS L EHAV LL +C+S
Sbjct: 230 SKFAEKATALVEMILSHSEDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCRS 289
Query: 241 CREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCASNYSSRGRQINHDLIE 300
R+KYR LIL EG +PGLL +VDGT +++ AR LL LLR+ + R +++ +E
Sbjct: 290 DRDKYRKLILKEGAIPGLLSSTVDGTSKSRDRARVLLDLLRE-----TPREKEMTPLTLE 344
Query: 301 RIMEEIDAE---GEKLADTTLRLVEEMIAK 327
+I+ I + EK A+T +L+++M+ +
Sbjct: 345 KIVYGIAVQVDGAEKAAETAKKLLQDMVHR 374
>AT3G03440.1 | Symbols: | ARM repeat superfamily protein |
chr3:815709-818568 FORWARD LENGTH=408
Length = 408
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 165/286 (57%), Gaps = 9/286 (3%)
Query: 43 PLVSMLYSENYEAV-EASLCALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLT 101
PLVSML ++ E+ EA+L AL+++A E+NK+ II++G L +++ L S T+ +
Sbjct: 108 PLVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYA 167
Query: 102 IAAMLTLSSCKANKIAIASSGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLI 161
A++LTLS+ NK I ++G V LV+ + S Q++ DA+ L NL+T + +I
Sbjct: 168 SASLLTLSASANNKPIIGANGVVPLLVKVIKH--GSPQAKADAVMALSNLSTLPDNLSMI 225
Query: 162 VSSGVTISLLELIHSSVKSSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIED 221
+++ +L L+ SS KSS EK L+E ++ G + +VE +E+
Sbjct: 226 LATKPLSPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLEN 285
Query: 222 GSSLGKEHAVSILLLICQSCREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLR 281
GS +EHAV +LL +CQS R KYR IL EGV+PGLL+L+V GT +++ A+ LL LLR
Sbjct: 286 GSLQAREHAVGVLLTLCQSDRSKYREPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLR 345
Query: 282 DCASNYSSRGRQINHDLIERIMEEI--DAEGEKLADTTLRLVEEMI 325
+ S S ++ D IE I+ + +G+ + +++ EM+
Sbjct: 346 NSESPRS----EVQPDTIENIVSSLISHIDGDDQSGKAKKMLAEMV 387
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 150/292 (51%), Gaps = 12/292 (4%)
Query: 3 KVVVQNLWNGDEEAQIQAAMELSGLCSKQRHN---LAESGIMVPLVSMLYSENYEAVEAS 59
K +V+ L + + Q QA EL L N + SG +V LV +LYS + E +
Sbjct: 547 KKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENA 606
Query: 60 LCALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIA 119
+ AL++++ ++ NK I +G + L+ +L S + + A + +LS + NKI I
Sbjct: 607 VTALLNLSI-NDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIG 665
Query: 120 SSGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVK 179
SGA+ LV+ + + + + + DA L NL+ Q+ +IV SG L++L+
Sbjct: 666 QSGAIGPLVDLLGNG--TPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMD---P 720
Query: 180 SSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQ 239
++ +V+KA+ +L N+ G I +LVE +E GS+ GKE+A + LL +
Sbjct: 721 AAGMVDKAVAVLANLATIPEGRNAIGQE--GGIPLLVEVVELGSARGKENAAAALLQLST 778
Query: 240 SCREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCASNYSSRG 291
+ ++ ++L EG +P L+ LS GT RA+ A+ LL R+ + RG
Sbjct: 779 NS-GRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRNQRHGNAGRG 829
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 155/292 (53%), Gaps = 13/292 (4%)
Query: 5 VVQNLWNGDEEAQIQAAMELSGLCS---KQRHNLAESGIMVPLVSMLYSENYEAVEASLC 61
+V++L +G + + AA E+ L + R ++ G + PL+S+LYSE E ++
Sbjct: 441 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 500
Query: 62 ALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIA-S 120
AL++++ SE NK I++ G + L+ +L+ + + + A++ +LS + N+ I S
Sbjct: 501 ALLNLSI-SELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQS 559
Query: 121 SGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKS 180
+ A+Q LV + + + + DA + L NL+ IV + L+EL+ ++
Sbjct: 560 NAAIQALVNLLGKG--TFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLE- 616
Query: 181 SSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQS 240
+V+KA+ LL N+ G I +LVET++ GS GKE+A S+LL +C +
Sbjct: 617 --MVDKAVALLANL--SAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLN 672
Query: 241 CREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCASNYSSRGR 292
K+ L+L EG +P L+ LS GT+RAK A++LL R+ +GR
Sbjct: 673 S-PKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRDARMKKGR 723
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 150/292 (51%), Gaps = 12/292 (4%)
Query: 3 KVVVQNLWNGDEEAQIQAAMELSGLCSKQRHN---LAESGIMVPLVSMLYSENYEAVEAS 59
K +V+ L + + Q QA EL L N + SG +V LV +LYS + E +
Sbjct: 544 KKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENA 603
Query: 60 LCALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIA 119
+ AL++++ ++ NK I +G + L+ +L S + + A + +LS + NKI I
Sbjct: 604 VTALLNLSI-NDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIG 662
Query: 120 SSGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVK 179
SGA+ LV+ + + + + + DA L NL+ Q+ +IV SG L++L+
Sbjct: 663 QSGAIGPLVDLLGNG--TPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMD---P 717
Query: 180 SSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQ 239
++ +V+KA+ +L N+ G I +LVE +E GS+ GKE+A + LL +
Sbjct: 718 AAGMVDKAVAVLANLATIPEGRNAIGQE--GGIPLLVEVVELGSARGKENAAAALLQLST 775
Query: 240 SCREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCASNYSSRG 291
+ ++ ++L EG +P L+ LS GT RA+ A+ LL R+ + RG
Sbjct: 776 NS-GRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRNQRHGNAGRG 826
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 155/292 (53%), Gaps = 13/292 (4%)
Query: 5 VVQNLWNGDEEAQIQAAMELSGLCS---KQRHNLAESGIMVPLVSMLYSENYEAVEASLC 61
+V++L +G + + AA E+ L + R ++ G + PL+S+LYSE E ++
Sbjct: 477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 536
Query: 62 ALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIA-S 120
AL++++ SE NK I++ G + L+ +L+ + + + A++ +LS + N+ I S
Sbjct: 537 ALLNLSI-SELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQS 595
Query: 121 SGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKS 180
+ A+Q LV + + + + DA + L NL+ IV + L+EL+ ++
Sbjct: 596 NAAIQALVNLLGKG--TFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLE- 652
Query: 181 SSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQS 240
+V+KA+ LL N+ G I +LVET++ GS GKE+A S+LL +C +
Sbjct: 653 --MVDKAVALLANL--SAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLN 708
Query: 241 CREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCASNYSSRGR 292
K+ L+L EG +P L+ LS GT+RAK A++LL R+ +GR
Sbjct: 709 S-PKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRDARMKKGR 759
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 11/270 (4%)
Query: 15 EAQIQAAMELSGLCSKQRHN---LAESGIMVPLVSMLYSENYEAVEASLCALVSIAFGSE 71
+ Q QAAME+ L + N +A++G + PL+S++ S + + E + A+++++ E
Sbjct: 78 DEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLCDE 137
Query: 72 RNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVEFV 131
NK I SG + L+ L + T + A+L LS + NK+AI SGA+ LV +
Sbjct: 138 -NKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNLL 196
Query: 132 NSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSSLVEKAIGLL 191
+ +++ DA L++L + ++ V SG+ L+EL+ S++V+K+ ++
Sbjct: 197 ET--GGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADF--GSNMVDKSAFVM 252
Query: 192 ENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQSCREKYRGLILT 251
+ G + +LVE +E G+ KE AVSILL +C+ YR ++
Sbjct: 253 S--LLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEESV-VYRTMVAR 309
Query: 252 EGVMPGLLQLSVDGTRRAKSMARELLLLLR 281
EG +P L+ LS GT RAK A L+ LLR
Sbjct: 310 EGAIPPLVALSQAGTSRAKQKAEALIELLR 339
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 131/245 (53%), Gaps = 19/245 (7%)
Query: 44 LVSMLYSENYEAVEASLCALVSIAFGSERNKIRIIKSGTLPVLLSLLHC-QSQTVVQLTI 102
L S ++ N A E AL ++A + RNK ++ SG +P+L ++ C QSQ
Sbjct: 475 LESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISCSQSQGPA---T 531
Query: 103 AAMLTLSSCKANKIAIASSGAVQFLVEFVNSSMNSTQSQ--LDAIATLHNLTTCQQIVPL 160
A L LS + K I SS AV F FVN + T++Q LDA+ L+NL+T +P
Sbjct: 532 ALYLNLSCLEKAKPVIGSSQAVSF---FVNLLLQDTKTQCKLDALHALYNLSTYSPNIPT 588
Query: 161 IVSSGVTISLLELIHSSVKSSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIE 220
++SS + SL L +S + +EK++ +L N+ G I L ++
Sbjct: 589 LLSSNIIKSLQVL--ASTGNHLWIEKSLAVLLNLASSREGKEEMITTQ-GMISTLATVLD 645
Query: 221 DGSSLGKEHAVSILLLIC---QSCREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELL 277
G ++ +E AVS L+++C +SC + ++L EGV+P L+ +SV+G+ R + +++LL
Sbjct: 646 TGDTVEQEQAVSCLVILCTGSESCIQ----MVLQEGVIPSLVSISVNGSPRGRDKSQKLL 701
Query: 278 LLLRD 282
+L R+
Sbjct: 702 MLFRE 706
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 139/271 (51%), Gaps = 12/271 (4%)
Query: 15 EAQIQAAMELSGLCSKQRHN---LAESGIMVPLVSMLYSENYEAVEASLCALVSIAFGSE 71
E Q QAAME+ L + N LA++G + PLVS++ S + + E + A+++++ E
Sbjct: 76 EEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDE 135
Query: 72 RNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVEFV 131
NK I+ SG + L++ L + T + A+L LS + NKI I SGA+ LV +
Sbjct: 136 -NKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSGAIPLLVNLL 194
Query: 132 NSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSSLVEKAIGLL 191
+ +++ DA L++L + + V SG+ L+EL+ S +V+K+ ++
Sbjct: 195 ENG--GFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDF--ESDMVDKSAFVM 250
Query: 192 ENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQSCREKYRGLILT 251
+ G + +LVE +E G+ KE +VSILL +C+ YR ++
Sbjct: 251 N--LLMSAPESKPAVVEEGGVPVLVEIVEAGTQRQKEISVSILLQLCEESV-VYRTMVAR 307
Query: 252 EGVMPGLLQLSV-DGTRRAKSMARELLLLLR 281
EG +P L+ LS +R AK A L+ LLR
Sbjct: 308 EGAVPPLVALSQGSASRGAKVKAEALIELLR 338
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 124/239 (51%), Gaps = 6/239 (2%)
Query: 44 LVSMLYSENYEAVEASLCALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIA 103
L S + N A ++ AL ++A + RNK ++ SG + +L ++ S A
Sbjct: 475 LGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMI--SSAESHGSATA 532
Query: 104 AMLTLSSCKANKIAIASSGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVS 163
L LS K I SS AV FLV+ + + TQ +LDA+ L+NL+T +P ++S
Sbjct: 533 LYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIE-TQCKLDALHALYNLSTYSPNIPALLS 591
Query: 164 SGVTISLLELIHSSVKSSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGS 223
S + SL L+ +S + +EK++ +L N+ G I L ++ G
Sbjct: 592 SNIIKSLQGLL-ASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQ-GMISSLATVLDMGD 649
Query: 224 SLGKEHAVSILLLICQSCREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRD 282
+ +E AVS LL++C RE ++L EGV+P L+ +SV+GT R + +++LL+L R+
Sbjct: 650 TTEQEQAVSCLLILCNG-RESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFRE 707
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 124/239 (51%), Gaps = 6/239 (2%)
Query: 44 LVSMLYSENYEAVEASLCALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIA 103
L S + N A ++ AL ++A + RNK ++ SG + +L ++ S A
Sbjct: 475 LGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMI--SSAESHGSATA 532
Query: 104 AMLTLSSCKANKIAIASSGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVS 163
L LS K I SS AV FLV+ + + TQ +LDA+ L+NL+T +P ++S
Sbjct: 533 LYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIE-TQCKLDALHALYNLSTYSPNIPALLS 591
Query: 164 SGVTISLLELIHSSVKSSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGS 223
S + SL L+ +S + +EK++ +L N+ G I L ++ G
Sbjct: 592 SNIIKSLQGLL-ASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQ-GMISSLATVLDMGD 649
Query: 224 SLGKEHAVSILLLICQSCREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRD 282
+ +E AVS LL++C RE ++L EGV+P L+ +SV+GT R + +++LL+L R+
Sbjct: 650 TTEQEQAVSCLLILCNG-RESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFRE 707
>AT2G25130.1 | Symbols: | ARM repeat superfamily protein |
chr2:10695243-10696959 REVERSE LENGTH=468
Length = 468
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 151/294 (51%), Gaps = 25/294 (8%)
Query: 32 RHNLAESGIMVPLVSMLYSENY--EAVEASLCALVSIAFGSERNKIRIIKSGTLPVLLSL 89
R LA G + PLVSM+ E+ +A+ ASL AL+++ G++ NK I+K+G + +L L
Sbjct: 144 RVTLAMLGAIPPLVSMIDDESQSEDALIASLYALLNLGIGNDVNKAAIVKAGVVHKMLKL 203
Query: 90 LHC---QSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVEFVNS--SMNSTQSQLDA 144
+ +Q + + +A L LS+ +NK I SSGA+ FLV+ + + +S+Q++ DA
Sbjct: 204 VESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLKNFEETSSSQAREDA 263
Query: 145 IATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSSLVEKAIGLLENVVXXXXXXXXX 204
+ L+NL+ Q V I+ + L+ + +++ + E+ + +L NVV
Sbjct: 264 LRALYNLSIYHQNVSFILET----DLIPFLLNTLGDMEVSERILAILTNVVSVPEGRKAI 319
Query: 205 XXXXXGAIQILVETIEDGSSLG-KEHAVSILLLICQSCREKYRGLILTEGVMPGLLQLSV 263
A ILV+ + S+ +E AV IL+L+ R ++ G+ LL+L++
Sbjct: 320 GEVVE-AFPILVDVLNWNDSIKCQEKAVYILMLMAHKGYGD-RNAMIEAGIESSLLELTL 377
Query: 264 DGTRRAKSMARELLLLLR--D-----CASNY--SSRGRQINHDLIERIMEEIDA 308
G+ A+ A +L LR D A Y SS GR+ HDL R+ +E A
Sbjct: 378 VGSPLAQKRASRVLECLRVVDKGKQVSAPIYGTSSLGRERGHDL--RMTDERKA 429
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 10/257 (3%)
Query: 35 LAESGIMVPLVSMLYSENYEAVEASLCALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQS 94
+ ESG + L+ +L + E ++ AL++++ ++NK I G + L+ +L +
Sbjct: 221 IGESGAIQALIPLLRCNDPWTQEHAVTALLNLSL-HDQNKAVIAAGGAIKSLVWVLKTGT 279
Query: 95 QTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTC 154
+T Q A+L+L+ + NK +I + GA+ LV + + S + + DA+ TL+ L T
Sbjct: 280 ETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLLLN--GSCRGKKDALTTLYKLCTL 337
Query: 155 QQIVPLIVSSGVTISLLELIHSSVKSSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQI 214
QQ V++G L++L+ + + + + EKA+ +L ++ G I
Sbjct: 338 QQNKERAVTAGAVKPLVDLV--AEEGTGMAEKAMVVLSSLAAIDDGKEAIVEE--GGIAA 393
Query: 215 LVETIEDGSSLGKEHAVSILLLICQSCREKYRGLILTEGVMPGLLQLSVDG--TRRAKSM 272
LVE IEDGS GKE A+ LL +C S + RGL++ EG +P L+ LS G + RAK
Sbjct: 394 LVEAIEDGSVKGKEFAILTLLQLC-SDSVRNRGLLVREGAIPPLVGLSQSGSVSVRAKRK 452
Query: 273 ARELLLLLRDCASNYSS 289
A LL LR+ SS
Sbjct: 453 AERLLGYLREPRKEASS 469
>AT4G31890.2 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 149/293 (50%), Gaps = 22/293 (7%)
Query: 12 GDEEAQIQAAMELSGLC---SKQRHNLAESGIMVPLVSMLY-SENYEAVEASLCALVSIA 67
GD +I AA E+ L S+ R LA G + PLVSM+ S +A ASL AL+++
Sbjct: 155 GDCRKKITAASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIVDAQIASLYALLNLG 214
Query: 68 FGSERNKIRIIKSGTLPVLLSLL---HCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAV 124
G++ NK I+K+G + +L L+ + Q + + +A L LS+ +NK I SSGA+
Sbjct: 215 IGNDANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAI 274
Query: 125 QFLVEFVNS--SMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSS 182
FLV+ + + +S+Q++ DA+ L+NL+ Q V I+ + + LL +++
Sbjct: 275 IFLVKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLL----NTLGDME 330
Query: 183 LVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLG-KEHAVSILLLICQSC 241
+ E+ + +L N+V A +LV+ + S G +E A IL+L+
Sbjct: 331 VSERILAILSNLV-AVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKG 389
Query: 242 REKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCASNYSSRGRQI 294
R +++ G+ LL+L++ G+ A+ A +L LR +G+Q+
Sbjct: 390 YGD-RQVMIEAGIESALLELTLLGSALAQKRASRILECLR------VDKGKQV 435
>AT4G31890.1 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 149/293 (50%), Gaps = 22/293 (7%)
Query: 12 GDEEAQIQAAMELSGLC---SKQRHNLAESGIMVPLVSMLY-SENYEAVEASLCALVSIA 67
GD +I AA E+ L S+ R LA G + PLVSM+ S +A ASL AL+++
Sbjct: 155 GDCRKKITAASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIVDAQIASLYALLNLG 214
Query: 68 FGSERNKIRIIKSGTLPVLLSLL---HCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAV 124
G++ NK I+K+G + +L L+ + Q + + +A L LS+ +NK I SSGA+
Sbjct: 215 IGNDANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAI 274
Query: 125 QFLVEFVNS--SMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSS 182
FLV+ + + +S+Q++ DA+ L+NL+ Q V I+ + + LL +++
Sbjct: 275 IFLVKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLL----NTLGDME 330
Query: 183 LVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLG-KEHAVSILLLICQSC 241
+ E+ + +L N+V A +LV+ + S G +E A IL+L+
Sbjct: 331 VSERILAILSNLV-AVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKG 389
Query: 242 REKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCASNYSSRGRQI 294
R +++ G+ LL+L++ G+ A+ A +L LR +G+Q+
Sbjct: 390 YGD-RQVMIEAGIESALLELTLLGSALAQKRASRILECLR------VDKGKQV 435
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 8/270 (2%)
Query: 13 DEEAQIQAAMELSGLCSKQRHNLAESGIMVPLVSMLYSE-NYEAVEASLCALVSIAFGSE 71
D + LS + R +AE+G + LV +L S+ + E E ++ +++++ E
Sbjct: 357 DRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSI-YE 415
Query: 72 RNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVEFV 131
NK I+ +G + ++ +L S + A + +LS NKI I +SGA+ LV+ +
Sbjct: 416 HNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLL 475
Query: 132 NSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSSLVEKAIGLL 191
S + + DA L NL Q V +G+ L++++ S S + ++A+ +L
Sbjct: 476 Q--YGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDS-SSERMADEALTIL 532
Query: 192 ENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQSCREKYRGLILT 251
V AI L++ ++ +E+A +ILL +C+ EK +
Sbjct: 533 S--VLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRL 590
Query: 252 EGVMPGLLQLSVDGTRRAKSMARELLLLLR 281
V+P L++LS DGT RAK A LL LLR
Sbjct: 591 GAVVP-LMELSRDGTERAKRKANSLLELLR 619
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 8/270 (2%)
Query: 13 DEEAQIQAAMELSGLCSKQRHNLAESGIMVPLVSMLYSE-NYEAVEASLCALVSIAFGSE 71
D + LS + R +AE+G + LV +L S+ + E E ++ +++++ E
Sbjct: 209 DRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSI-YE 267
Query: 72 RNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVEFV 131
NK I+ +G + ++ +L S + A + +LS NKI I +SGA+ LV+ +
Sbjct: 268 HNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLL 327
Query: 132 NSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSSLVEKAIGLL 191
S + + DA L NL Q V +G+ L++++ S S + ++A+ +L
Sbjct: 328 Q--YGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDS-SSERMADEALTIL 384
Query: 192 ENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQSCREKYRGLILT 251
V AI L++ ++ +E+A +ILL +C+ EK +
Sbjct: 385 S--VLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRL 442
Query: 252 EGVMPGLLQLSVDGTRRAKSMARELLLLLR 281
V+P L++LS DGT RAK A LL LLR
Sbjct: 443 GAVVP-LMELSRDGTERAKRKANSLLELLR 471
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 13/242 (5%)
Query: 44 LVSMLYSENYEAVEASLCALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIA 103
L S L N A + AL ++A + RNK ++ SG +P+L +L C + +T A
Sbjct: 473 LGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEML-CNPHSHGSVT-A 530
Query: 104 AMLTLSSCKANKIAIASSGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVS 163
L LS + K I SS AV F+V + + Q ++DA+ +L +L+T +P ++S
Sbjct: 531 IYLNLSCLEEAKPVIGSSLAVPFMVNLLWTE-TEVQCKVDALHSLFHLSTYPPNIPCLLS 589
Query: 164 SGVTISLLELIHSSVKSSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGS 223
+ + +L L S EK++ + + + L ++ G
Sbjct: 590 ADLVNALQSLTISD--EQRWTEKSL-AVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGE 646
Query: 224 SLGKEHAVSILLLICQS---CREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLL 280
+E AVS+LL++C C E ++L EGV+P L+ +SV+GT+R + A++LL L
Sbjct: 647 PNEQEQAVSLLLILCNHSEICSE----MVLQEGVIPSLVSISVNGTQRGRERAQKLLTLF 702
Query: 281 RD 282
R+
Sbjct: 703 RE 704
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 120/285 (42%), Gaps = 51/285 (17%)
Query: 9 LWNGDEEAQIQAAMELSGLCSKQRHN--LAESGIMVPLVSMLYSENYEAVEASLCALVSI 66
L++ DE Q A L L + +AESG +VPL+ +L + E +A+ A +
Sbjct: 472 LYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFS 531
Query: 67 AFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQF 126
E K I ++G + L+ LL S + + A+ LS NK + +GAV++
Sbjct: 532 LSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRY 591
Query: 127 LVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSSLVEK 186
LVE ++ + + A+ L NL T + E
Sbjct: 592 LVELMDPAFGMVEK---AVVVLANLATVR-----------------------------EG 619
Query: 187 AIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQSCREKYR 246
I + E G I +LVE +E GS+ GKE+A + LL +C K+
Sbjct: 620 KIAIGEE----------------GGIPVLVEVVELGSARGKENATAALLQLCTHS-PKFC 662
Query: 247 GLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRDCASNYSSRG 291
++ EGV+P L+ L+ GT R K A+ LL + + RG
Sbjct: 663 NNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQSNQRRG 707
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 10/282 (3%)
Query: 3 KVVVQNLWNGDEEAQIQAAMELSGLCSKQRHN---LAESGIMVPLVSMLYSENYEAVEAS 59
+ +VQ L + E + A E+ L + N +AE+G + LV++L SE+ E +
Sbjct: 334 RALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENA 393
Query: 60 LCALVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIA 119
+ +++++ E NK I+ +G + ++ +L + + A + +LS NKI I
Sbjct: 394 ITCVLNLSI-YENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIG 452
Query: 120 SSGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVK 179
SGA+ LV+ + + + + + DA L NL V +G+ +L++++ S +
Sbjct: 453 GSGAIPALVDLLENG--TPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTR 510
Query: 180 SSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQ 239
+V++A+ +L V + L+ ++ + +E+A +ILL +C+
Sbjct: 511 HR-MVDEALTILS--VLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCK 567
Query: 240 SCREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLR 281
EK + V+P L+ LS +GT R K A LL LLR
Sbjct: 568 RDTEKLITIGRLGAVVP-LMDLSKNGTERGKRKAISLLELLR 608
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 136/270 (50%), Gaps = 17/270 (6%)
Query: 15 EAQIQAAMELSGLCSKQRHN---LAESGIMVPLVSMLY-SENYEAVEASLCALVSIAFGS 70
E + AA E+ L + HN +A SG + LV++L S + E ++ ++++++
Sbjct: 370 EDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQ 429
Query: 71 ERNKIRII-KSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVE 129
E NK +I+ SG +P ++ +L S + A + +LS NK+ I ++GA+ LV
Sbjct: 430 E-NKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVT 488
Query: 130 FVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSSLVEKAIG 189
+ S S + + DA L NL Q V +G+ L+ L+ + S +V++++
Sbjct: 489 LL--SEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLL--TEPESGMVDESLS 544
Query: 190 LLENVVXXXXXXXXXXXXXXGAIQILVETIEDGSSLGKEHAVSILLLICQSCREKYRGLI 249
+L + A+ +LV+ I GS KE++ ++L+ +C S +++ LI
Sbjct: 545 IL--AILSSHPDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLC-SWNQQH--LI 599
Query: 250 LTE--GVMPGLLQLSVDGTRRAKSMARELL 277
+ G+M L++++ +GT R K A +LL
Sbjct: 600 EAQKLGIMDLLIEMAENGTDRGKRKAAQLL 629
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 52/248 (20%)
Query: 73 NKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVEFVN 132
N++ I ++G +P+L+ LL + + ++ A+L LS C+ NK AI S+GA+ +V+ +
Sbjct: 386 NRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLK 445
Query: 133 SSMNSTQSQLDAIATLHNLTTCQQ----------IVPLIV-------------------- 162
S +++ +A ATL +L+ + I PL+V
Sbjct: 446 K--GSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNL 503
Query: 163 -----------SSGVTISLLELIHSSVKSSSLVEKAIGLLENVVXXXXXXXXXXXXXXGA 211
+GV +L L+ + S +V++A+ +L + A
Sbjct: 504 CIYQGNKGKAIRAGVIPTLTRLL--TEPGSGMVDEALAIL--AILSSHPEGKAIIGSSDA 559
Query: 212 IQILVETIEDGSSLGKEHAVSILLLICQSCREKYRGLILTE--GVMPGLLQLSVDGTRRA 269
+ LVE I GS +E+A ++L+ +C + L+ + G+M L+ L+ +GT R
Sbjct: 560 VPSLVEFIRTGSPRNRENAAAVLVHLCSG---DPQHLVEAQKLGLMGPLIDLAGNGTDRG 616
Query: 270 KSMARELL 277
K A +LL
Sbjct: 617 KRKAAQLL 624
>AT5G62560.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:25110073-25111752 FORWARD
LENGTH=559
Length = 559
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 71 ERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVEF 130
++NK++I++SG +P+L+ +L + + A+ +L+ NK+ I GAV+ L+
Sbjct: 307 KQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHA 366
Query: 131 VNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSSLVEKAIGL 190
+ SS S +++ DA L++L+ +V +G +LL ++ S +S + L
Sbjct: 367 LRSS-ESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRI------L 419
Query: 191 LENVVXXXXXXXXXXXXXXGAIQILVETIED----GSSLGKEHAVSILLLICQSCREKYR 246
L A+ ILV + + S +E+ V++LL +CQ ++R
Sbjct: 420 LVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQG-NLRFR 478
Query: 247 GLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLR 281
GL G L+++ +G R K A ++LL +R
Sbjct: 479 GLASEAGAEEVLMEVEENGNERVKEKASKILLAMR 513
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 45/295 (15%)
Query: 4 VVVQNLWNGDEEAQIQAAMELSGLCSKQRHN---LAESGIMVPLVSMLYSENYEAVEASL 60
++++ L +G + AQ AA E+ L + N +AE+G + L +L SEN A E S+
Sbjct: 410 ILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSV 469
Query: 61 CALVSIAFGSERNKIRIIKSGT-----LPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANK 115
A+++++ E+NK RI++ G + VL+S L ++Q T+ ++ + K +
Sbjct: 470 TAMLNLSI-YEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYK-KR 527
Query: 116 IAIASSGAVQFLVEFVNSSMNSTQSQLDAIATLHNLTT----CQQ---------IVPLIV 162
IAI V+ L + + + + + DA+ L+NL+T C + +V +
Sbjct: 528 IAIVDQ-CVEALALLLQNG--TPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALK 584
Query: 163 SSGVTISLLELIHSSVKSSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQILVETIEDG 222
+ GV + V+ S L +AIG ++ A+ L+ + G
Sbjct: 585 NEGVAEEAAGALALLVRQS-LGAEAIGKEDS-----------------AVAGLMGMMRCG 626
Query: 223 SSLGKEHAVSILLLICQSCREKYRGLILTEGVMPGLLQ-LSVDGTRRAKSMAREL 276
+ GKE+AV+ LL +C+S +L + GLLQ L GT+RA+ A L
Sbjct: 627 TPRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASL 681
>AT2G27430.1 | Symbols: | ARM repeat superfamily protein |
chr2:11729914-11733170 REVERSE LENGTH=438
Length = 438
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 20/286 (6%)
Query: 6 VQNLWNGDEEAQIQAAMELSGLC---SKQRHNLAESGIMVPLVSMLYSENYEAVEASLCA 62
V+ + G E + +AA+E+ L K R +AE G++ LVSM+ S+ +A++ A
Sbjct: 83 VKKIHFGSWEEKEKAAIEIEKLAREDKKTRKLMAELGVIQILVSMVASDVSGHQKAAVNA 142
Query: 63 LVSIAFGSERNKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSG 122
L+ ++ G+ NK ++ + L + Q+ +L+LSS ++ +ASS
Sbjct: 143 LIQLSHGTYTNKALMVNADICSKLPKNVEVLDQSTRHAFAELLLSLSSLTNTQLPVASSQ 202
Query: 123 AVQFLVEFVNSSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSS 182
+ FL++ +NS +++ +AT+ NL + +V +G +LL L+ +
Sbjct: 203 ILPFLMDTMNSDSTDMKTKEICLATISNLCLVLENAGPLVLNGAVETLLSLMS----TKD 258
Query: 183 LVEKAIGLLENVVXXXXXXXXXXX---XXXGAIQILVETIEDGSSLGKEHAVSILLLICQ 239
L EKA+ L +V G I+IL T ED +E+A IL+++
Sbjct: 259 LSEKALASLGKLVVTQMGKKAMEDCLLVSKGLIEIL--TWEDIPKC-QEYAAYILMVLAH 315
Query: 240 ---SCREKYRGLILTEGVMPGLLQLSVDGTRRAKSMARELLLLLRD 282
S REK + G++P LL++S+ G+ + A +LL +D
Sbjct: 316 QSWSQREK----MAKAGIVPVLLEVSLLGSPLVQKRAVKLLQWFKD 357
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 44/248 (17%)
Query: 73 NKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVEFV- 131
N++ I ++G +P+L+ LL + ++ A+L LS + NK AI +GA+ +VE +
Sbjct: 379 NRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLK 438
Query: 132 NSSMNSTQS--------------------------------------QLDAIATLHNLTT 153
N SM + ++ + DA + NL
Sbjct: 439 NGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCI 498
Query: 154 CQQIVPLIVSSGVTISLLELIHSSVKSSSLVEKAIGLLENVVXXXXXXXXXXXXXXGAIQ 213
Q V G+ L L+ + +V++A+ +L + +I
Sbjct: 499 YQGNKSRAVKGGIVDPLTRLLKDA--GGGMVDEALAIL--AILSTNQEGKTAIAEAESIP 554
Query: 214 ILVETIEDGSSLGKEHAVSILLLICQSCREKYRGLILTEGVMPGLLQLSVDGTRRAKSMA 273
+LVE I GS +E+A +IL +C E+ + G L +L+ +GT RAK A
Sbjct: 555 VLVEIIRTGSPRNRENAAAILWYLCIGNIERL-NVAREVGADVALKELTENGTDRAKRKA 613
Query: 274 RELLLLLR 281
LL L++
Sbjct: 614 ASLLELIQ 621
>AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 |
chr3:17644434-17645963 FORWARD LENGTH=509
Length = 509
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 73 NKIRIIKSGTLPVLLSLLHCQSQTVVQLTIAAMLTLSSCKANKIAIASSGAVQFLVEFVN 132
NK++I++SG +P+L+ +L S + I A+ +L+ + NK+ I GAV+ L+ +
Sbjct: 258 NKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALR 317
Query: 133 SSMNSTQSQLDAIATLHNLTTCQQIVPLIVSSGVTISLLELIHSSVKSSSL 183
SS S +++ DA L++L+ +V +G +L +I S +S +
Sbjct: 318 SS-ESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRI 367