Miyakogusa Predicted Gene

Lj2g3v0919430.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0919430.2 Non Chatacterized Hit- tr|I1K1N8|I1K1N8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49428
PE,75.45,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.35756.2
         (1326 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G48110.1 | Symbols: REF4, MED33B | reduced epidermal fluoresc...  1228   0.0  
AT3G23590.1 | Symbols: RFR1, MED33A | REF4-related 1 | chr3:8467...  1220   0.0  

>AT2G48110.1 | Symbols: REF4, MED33B | reduced epidermal fluorescence
            4 | chr2:19673370-19679494 FORWARD LENGTH=1275
          Length = 1275

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1345 (50%), Positives = 840/1345 (62%), Gaps = 105/1345 (7%)

Query: 2    VWDGVLDLTKWAQENKTDPLLWSIEVRSRLNAAAVPLPSAELAHRLVSHIFWENHVPLTW 61
            +W+ V  L + AQE   DPL W++++R  L +A + LPS +LA  LV+HIFWENH PL+W
Sbjct: 10   LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 62   KFLEKAMEXXXXXXXXXXXXXXXXXXXHRHAHLLPSAYALYLHLLNRHAFALTPLINSPE 121
            K LEKA+                    +R  H  P+AY LY+ LL RHAF+  PLI +P 
Sbjct: 70   KLLEKAISVNIVPPLLVLALLSPRVIPNRKLH--PAAYRLYMELLKRHAFSFMPLIRAPG 127

Query: 122  YPTVMRSVHHALRFSHLYPSQQQPLHPGAVLVQFLFTVVWQLVEASLEDEGLLEPXXXXX 181
            Y   M S+   L  S  +  Q Q   PG++L+ F+F++VW+L++ASL++EGLLE      
Sbjct: 128  YHKTMNSIDDILHLSETFGVQDQ--EPGSILLAFVFSIVWELLDASLDEEGLLE-LTSNK 184

Query: 182  XXXXXXXXXXXXXXXXXNYFADHKDGNVLHRKNTATAIEVIARFLHNKVTSRILSLVHRN 241
                             N    +++ + L + NT  AIE+I  FL NKVTSRIL L  +N
Sbjct: 185  RSKWPSSPHDMDLDGLENSVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQN 244

Query: 242  MPAHWEPFVHQLQRLVGNSLVLRSLKHITPESLLPLDSKTNGLLSPEWKATPPKLDLSAV 301
            M                                   +SKT            P+ +  A+
Sbjct: 245  M-----------------------------------ESKTI-----------PRGEFHAI 258

Query: 302  MAANAGSRVSCALQSHHDSWSSLWLPIDLLLEDAMDSDHVATTSAVEVLTGLVKALQAVH 361
            +++  GS++  AL S     S+LWLPIDL  ED MD    A  SAVE LTGLVKALQA +
Sbjct: 259  VSS--GSKL--ALTSD----SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAAN 310

Query: 362  GTAWHNAFLG-------------------LWIAALRIVQRERDPSEGPVPRXXXXXXXXX 402
             T+WH+AFL                     ++  L I+  ERDP EGPVPR         
Sbjct: 311  STSWHDAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLL 370

Query: 403  XXXXXVVANXXXXXXXXXXXXXXRSPTNQRKDKQALGERRGELITCLQLLGDYEDLLKPP 462
                  VAN               SP+NQ K+K+  G+ R  LI  LQ LGDYE LL PP
Sbjct: 371  SVTPLAVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPP 428

Query: 463  QSVIWVANQAAAKATLFVSGHNGYLGSMNVNDLPMNCSGNLWHVIIEACIARHLLDTSAY 522
            +SV  VANQAAAKA +F+SG     GS     +  + SG         C  R  L T   
Sbjct: 429  RSVQSVANQAAAKAIMFISGITNSNGSYENTSMSESASG--------CCKVRFSLFTLKM 480

Query: 523  FWPGYVSAACSRLAHSIPNHLPSWSSLMKGSPLTPPLVNVLVATPASSLAEIEKVFEFAI 582
            F    V   C         ++  WS +MKGSPLTP L N L+ TPASSLAEIEK++E A 
Sbjct: 481  FVVMGVYLLC---------NISCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVAT 531

Query: 583  NGSDEEKISAATILCGASLVRGWNVQEHVVFFIINFLSPPIPPKYSGTESHLISYAPFLN 642
             GS++EKI+ A+ILCGASL RGW++QEHV+ FI+  LSPP P   SG+ SHLI+ APFLN
Sbjct: 532  TGSEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLN 591

Query: 643  VLLVGISPVDSVQIFSLHGAVPLLAAALMPICEAFGSCVPNVSWTAATGEKLSCHGVFSN 702
            VLLVGISP+D V IFSLHG VPLLA ALMPICEAFGS VPN++WT  TGE +S H VFS 
Sbjct: 592  VLLVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFST 651

Query: 703  AFVLLLRLWRFGHPPPEHVVGAAATPALGSQLGPEFLLVVRNSLLASFGKSPRDRISSRR 762
            AF LLLRLWRF HPP ++V+G    P +G Q  PE+LL+VRN  L  FGKSP+DR++ RR
Sbjct: 652  AFTLLLRLWRFDHPPLDYVLG--DVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRR 709

Query: 763  YSKMITIATEPVFMDSFPKLNIWYRQHQECIASTRSALAPGGPILQIVDALLSMMCRKMX 822
            +SK+I I+ +P+FMDSFP+L  WYRQHQEC+AS  S L  G P+  IVD+LLSMM +K  
Sbjct: 710  FSKVIDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKAN 769

Query: 823  XXXXXXXXXXXXXXXXXXXXLDDILMKLKVPAWDILEAAPFVLDAALTACAHGSLYPREL 882
                                 DD   +LK+PAWDILEAAPFVLDAALTACAHGSL PREL
Sbjct: 770  KGGSQSLTPSSGSSSLSTSGGDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPREL 829

Query: 883  ATGLKDLADFLPASLATIVSYFSAEVTRGVWKPAFMNGTDWASPAANLAIVEQQIKKILA 942
            ATGLK LADFLPA+L T+VSYFS+EVTRG+WKP  MNGTDW SPAANLA VEQQI+KILA
Sbjct: 830  ATGLKILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILA 889

Query: 943  ATGVDVPSLAIDGNXXXXXXXXXXXXXXXXITYKLDKTSERFLVLTGPSLINLSAGCPWP 1002
            ATGVDVP L  DG                 ITYKLDK +ERFLVL GP+L +L+A CPWP
Sbjct: 890  ATGVDVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWP 949

Query: 1003 CMPIVASLWAQKVKRWSDFFVFCASGNVFNHRRDAVVQLLRSCFTSTLGLGSAS-MYNNX 1061
            CMPIV SLW QKVKRWSDF +F AS  VF+H RDAV+QLLRSCFT TLGL   S + +  
Sbjct: 950  CMPIVTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYG 1009

Query: 1062 XXXXXXXXXXXXXXXXXISPVAPGFLYLRVYRSIRDVMFLTEEIVSLLMLSVRDIASGGL 1121
                             IS  APG LY++V+RSIRDVMFLTEEI+SLLM SV+ IA+  L
Sbjct: 1010 GVGALLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATREL 1069

Query: 1122 PKGEVHKPKRTKHGMRY--GQVSLAASMTRVKHAALIGASFLWISGGASLVQSLIIETLP 1179
            P G+  K K+TK G RY  GQVSL+ +M RVK AA +GAS +WISGG +LVQ+LI ETLP
Sbjct: 1070 PAGQAEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLP 1129

Query: 1180 SWFLSAQGLEQEVEESGVMVAMLRGYALACFAVLSGTFAWGIDSLSTASKRRPKILAIHL 1239
            SWF+S  G E E+   G MV MLRGYALA FA+LS  FAWG+DS   ASKRRP++L +HL
Sbjct: 1130 SWFISVHGEEDEL---GGMVPMLRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHL 1186

Query: 1240 DFLANALDGKVSLRCDCATWRAYVSGIISLMVSCTPLWIQELDVGLLKRVSMGLRQLNEE 1299
            +F+ +AL+GK+SL CD ATW+AYV+G +SLMV CTP W+ E+DV ++KR+S  LRQ NE+
Sbjct: 1187 EFMVSALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQ 1246

Query: 1300 DLALRLLEIRGASVMGEVAEMIIQS 1324
            DLAL LL   G   MG   E+I+++
Sbjct: 1247 DLALALLCAGGLGTMGAATELIVET 1271


>AT3G23590.1 | Symbols: RFR1, MED33A | REF4-related 1 |
            chr3:8467638-8473469 FORWARD LENGTH=1309
          Length = 1309

 Score = 1220 bits (3157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/1329 (50%), Positives = 853/1329 (64%), Gaps = 38/1329 (2%)

Query: 2    VWDGVLDLTKWAQENKTDPLLWSIEVRSRLNAAAVPLPSAELAHRLVSHIFWENHVPLTW 61
            VWD V++LTK AQEN  DP LW+ ++ S L   AV LPS ELA  +VS+I W+N+VP+ W
Sbjct: 9    VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 62   KFLEKAMEXXXXXXXXXXXXXXXXXXXHRHAHLLPSAYALYLHLLNRHAFALTPLINSPE 121
            KFLE+AM                     R      +AY +YL LL R+ F +   I+ P 
Sbjct: 69   KFLERAMALKLVSPLVVLALLADRVVPTRSTQ--QAAYRIYLELLKRNMFTIKDHISGPH 126

Query: 122  YPTVMRSVHHALRFSHLYPSQQQPLHPGAVLVQFLFTVVWQLVEASLEDEGLLEPXXXXX 181
            Y  VM SV + LR S L+        PG +LV+F+F +V QL++A+L DEGLLE      
Sbjct: 127  YQKVMISVSNILRLSELFDLDTS--KPGVLLVEFVFKMVSQLLDAALSDEGLLE-LSQDS 183

Query: 182  XXXXXXXXXXXXXXXXXNYFADHKDGNV--LHRKNTATAIEVIARFLHNKVTSRILSLVH 239
                              Y  + K G++  L   NT  AIE+IA FL N V +R+L LV 
Sbjct: 184  SSQWLVKSQDMEIDAPERY--NEKTGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVS 241

Query: 240  RNMPAHWEPFVHQLQRLVGNSLVLRSLKHITPESLLPLDSKTNGLLSPEWKATPPKLDLS 299
             N  + W  FV ++Q L  NS  L+  K +    LL L S      S + K T  +   +
Sbjct: 242  SNRASKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNA 301

Query: 300  AVMAANAGSRVSCALQSHHDSWSSLWLPIDLLLEDAMDSDHVATTSAVEVLTGLVKALQA 359
             V   + GS  S A   H  S SSLWLP+DL+ EDAMD   V  TSA+E++TGL K L+ 
Sbjct: 302  IV---DFGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKE 358

Query: 360  VHGTAWHNAFLGLWIAALRIVQRERDPSEGPVPRXXXXXXXXXXXXXXVVANXXXXXXXX 419
            ++G+ WH+ FLGLWIAALR+VQRERDP EGP+PR              VVAN        
Sbjct: 359  INGSTWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANL------- 411

Query: 420  XXXXXXRSPTNQRKDKQALGERRGELITCLQLLGDYEDLLKPPQSVIWVANQAAAKATLF 479
                       + K +  + + R +L+T LQ+LGD+  LL PP+ V+  AN+AA KA LF
Sbjct: 412  ---------IEEGKYESVMEKLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILF 462

Query: 480  VSGHN---GYLGSMNVNDLPMNCSGNLWHVIIEACIARHLLDTSAYFWPGYVSAACSRLA 536
            +SG N        +N+ D+P+NCSGN+ H+I+EACIAR++LD SAY WPGYV+   +++ 
Sbjct: 463  LSGGNVGKSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIP 522

Query: 537  HSIPNHLPSWSSLMKGSPLTPPLVNVLVATPASSLAEIEKVFEFAINGSDEEKISAATIL 596
             S+PN +P WSS +KG+PL   +VN LV+ PASSLAE+EK+FE A+ GSD+EKISAAT+L
Sbjct: 523  QSLPNEVPCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVL 582

Query: 597  CGASLVRGWNVQEHVVFFIINFLSPPIPPKYSGTESHLISYAPFLNVLLVGISPVDSVQI 656
            CGASL RGWN+QEH V ++   LSPP+P  YS  E+HLI YA  LNV++VGI  VDS+QI
Sbjct: 583  CGASLTRGWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQI 642

Query: 657  FSLHGAVPLLAAALMPICEAFGSCVPNVSWTAATGEKLSCHGVFSNAFVLLLRLWRFGHP 716
            FSLHG VP LA +LMPICE FGS  P+VSWT  +GE +S + VFSNAF LLL+LWRF HP
Sbjct: 643  FSLHGMVPQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHP 702

Query: 717  PPEHVVGAAATPALGSQLGPEFLLVVRNSLLASFGKSPRDRISSRRYSKMITIAT-EPVF 775
            P EH VG    P +GSQL PE LL VRNS L S     RDR + +R S++   A+ +PVF
Sbjct: 703  PIEHGVG--DVPTVGSQLTPEHLLSVRNSYLVSSEILDRDR-NRKRLSEVARAASCQPVF 759

Query: 776  MDSFPKLNIWYRQHQECIASTRSALAPGGPILQIVDALLSMMCRKMXXXXXXXXXXXXXX 835
            +DSFPKL +WYRQHQ CIA+T S L  G P+ Q V+ALL+M   K+              
Sbjct: 760  VDSFPKLKVWYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKVRGSQTLNPVNSGTS 819

Query: 836  XXXXXXXLDDILMKLKVPAWDILEAAPFVLDAALTACAHGSLYPRELATGLKDLADFLPA 895
                    +D  ++ + PAWDIL+A P+V+DAALTAC HG L PR+LATGLKDLADFLPA
Sbjct: 820  SSSGAAS-EDSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPA 878

Query: 896  SLATIVSYFSAEVTRGVWKPAFMNGTDWASPAANLAIVEQQIKKILAATGVDVPSLAIDG 955
            SLATIVSYFSAEV+RGVWKP FMNG DW SPA NL+ VE+ I KILA TGVD+PSLA  G
Sbjct: 879  SLATIVSYFSAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGG 938

Query: 956  NXXXXXXXXXXXXXXXXITYKLDKTSERFLVLTGPSLINLSAGCPWPCMPIVASLWAQKV 1015
            +                ITYK+DK SERFL L GP+L  L+AGCPWPCMPIVASLW QK 
Sbjct: 939  SSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKA 998

Query: 1016 KRWSDFFVFCASGNVFNHRRDAVVQLLRSCFTSTLGLGSASMYNNXXXXXXXXXXXXXXX 1075
            KRW DF VF AS  VF H +DAV+QLLR+CF++TLGL +A M N+               
Sbjct: 999  KRWFDFLVFSASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHF 1058

Query: 1076 XXXISPVAPGFLYLRVYRSIRDVMFLTEEIVSLLMLSVRDIASGGLPKGEVHKPKRTKHG 1135
               ISPVAPG LYLR+YR++RD + ++EEI+SLL+ SV DIA   L K ++ K K  K+G
Sbjct: 1059 YGGISPVAPGILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNG 1118

Query: 1136 MRYGQVSLAASMTRVKHAALIGASFLWISGGASLVQSLIIETLPSWFLSAQGLEQEVEES 1195
             RYGQ SLA +MT+VK AA + AS +W++GG  +V  LI ET+PSWFLS    ++E   S
Sbjct: 1119 SRYGQSSLATAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGPS 1178

Query: 1196 GVMVAMLRGYALACFAVLSGTFAWGIDSLSTASKRRPK-ILAIHLDFLANALDGKVSLRC 1254
              +VA LRG+ALA F VL G   WG+DS S+ASKRR + IL  HL+F+A+ALDGK+S+ C
Sbjct: 1179 D-LVAELRGHALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGC 1237

Query: 1255 DCATWRAYVSGIISLMVSCTPLWIQELDVGLLKRVSMGLRQLNEEDLALRLLEIRGASVM 1314
            + ATWR Y+SG++SLMVSC PLW+ E+D  +LK +S GLR+  +++LA+ LL + G   M
Sbjct: 1238 ETATWRTYISGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTM 1297

Query: 1315 GEVAEMIIQ 1323
               A+ II 
Sbjct: 1298 DYAADFIIH 1306