Miyakogusa Predicted Gene

Lj2g3v0918390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0918390.1 tr|I1N5M3|I1N5M3_SOYBN Elongation factor Ts,
mitochondrial OS=Glycine max GN=Gma.57273 PE=3
SV=1,76.15,0,EF_Ts,Translation elongation factor EFTs/EF1B; seg,NULL;
EF_TS,Translation elongation factor EFTs/EF,CUFF.35753.1
         (353 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G11120.1 | Symbols:  | translation elongation factor Ts (EF-T...   468   e-132
AT4G29060.1 | Symbols: emb2726 | elongation factor Ts family pro...    83   3e-16
AT4G29060.2 | Symbols: emb2726 | elongation factor Ts family pro...    82   7e-16

>AT4G11120.1 | Symbols:  | translation elongation factor Ts (EF-Ts),
           putative | chr4:6778066-6779934 FORWARD LENGTH=395
          Length = 395

 Score =  468 bits (1203), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/341 (67%), Positives = 280/341 (82%), Gaps = 8/341 (2%)

Query: 20  YGRQCHHYSSSA----SNEMNLVKQLRERTSAPIKDVKAALVDSNWDIEEAQKELRKRGK 75
           +G     +SS A    S++M+L+KQLRERTSAPIKDVKA+LV+ NWD+E AQK+LRKRGK
Sbjct: 56  FGNFIRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGK 115

Query: 76  VLASKKSSRTASEGLLALAHDRTRAALVELNCETDFVARNEIFQHXXXXXXXXXXXXENS 135
           VLASKKSSRTA+EG+LA+A +  + A++ELNCETDFVARNEIFQ+            E+S
Sbjct: 116 VLASKKSSRTAAEGMLAVAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESS 175

Query: 136 S---DAPFHFGPQSLEEMRLDLQHPKISGETTVHNAITEVAAIMGENVKLRRGFVMPASS 192
           S      F FGP+  EE +L+L HPK++GETTV NA+TEVAAIMGENVK RRGF+M  SS
Sbjct: 176 SQQVSGVFPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSS 235

Query: 193 QGLISTYLHTSPQPGLGRIAGILSLEVDNGNTRVDALQRVGSELAMHVVAAKPLFLTKEL 252
            G++S YLHTSPQPGLGRIAGI+SLEV+  NT+++A+QRVGSELAMHVVAAKPLFL+K+L
Sbjct: 236 AGVLSAYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMHVVAAKPLFLSKDL 295

Query: 253 VSSEALENEREVLKSQAEASGKPQMAINKMVEGRLRKYFEEVVLMEQKFILNDALNVKTV 312
           VSSEA+ NERE+LKSQAE++GK QMAI K+VEGRLRKYFEEV LMEQKFI+NDA+N+KT+
Sbjct: 296 VSSEAMANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFIVNDAINIKTL 355

Query: 313 LDNLSKEVGSSVRIGSFLRMEVGEGIASQEADSSESVAQVA 353
           +DNLSKEVGS V++  FLR+EVGEGI   EA S E VAQ A
Sbjct: 356 VDNLSKEVGSPVKVTDFLRVEVGEGIERLEA-SDEPVAQTA 395


>AT4G29060.1 | Symbols: emb2726 | elongation factor Ts family
           protein | chr4:14317744-14321315 FORWARD LENGTH=953
          Length = 953

 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 1/85 (1%)

Query: 37  LVKQLRERTSAPIKDVKAALVDSNWDIEEAQKELRKRGKVLASKKSSRTASEGLL-ALAH 95
           LVKQLRE T A + D K AL  +  D+E+AQ+ LRK+G   A KKSSR ASEG + +  H
Sbjct: 761 LVKQLREETGAGMMDCKKALAATGGDLEKAQEFLRKKGLSSADKKSSRLASEGRIGSYIH 820

Query: 96  DRTRAALVELNCETDFVARNEIFQH 120
           D     L+E+NCETDFV R+E F+ 
Sbjct: 821 DSRIGVLIEVNCETDFVGRSEKFKE 845



 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 1/85 (1%)

Query: 37  LVKQLRERTSAPIKDVKAALVDSNWDIEEAQKELRKRGKVLASKKSSRTASEGLL-ALAH 95
           LVKQLRE T A + D K AL +S  D+ +AQ+ LRK+G   A KK+SR  SEG + A  H
Sbjct: 523 LVKQLREETGAGMMDCKNALSESEGDMVKAQEYLRKKGLASADKKASRATSEGRIGAYIH 582

Query: 96  DRTRAALVELNCETDFVARNEIFQH 120
           D     L+E+NCETDFV+R +IF+ 
Sbjct: 583 DSRIGVLLEVNCETDFVSRGDIFKE 607



 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)

Query: 190 ASSQGLISTYLHTSPQPGLGRIAGILSLEVDNG-NTRVDALQRVGSELAMHVVAAKPL-F 247
           A+S+G I  Y+H S      RI  +L +  +    +R D  + +  +LAM V A   + +
Sbjct: 571 ATSEGRIGAYIHDS------RIGVLLEVNCETDFVSRGDIFKELVDDLAMQVAACPQVEY 624

Query: 248 LTKELVSSEALENEREVLKSQAEASGKPQMAINKMVEGRLRKYFEEVVLMEQKFILNDAL 307
           L  E VS E ++ E+E+   + +   KP+    K+V+GR++K  + + L+EQ +I +D +
Sbjct: 625 LVTEDVSEEIVKKEKEIEMQKEDLLSKPEQIREKIVDGRIKKRLDSLALLEQPYIKDDKV 684

Query: 308 NVKTVLDNLSKEVGSSVRIGSFLRMEVGEGIASQEAD 344
            VK ++      +G ++++  F+R  +GEG+  +  D
Sbjct: 685 IVKDLVKQRIATIGENIKVKRFVRYTLGEGLEKKSQD 721



 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 78/148 (52%), Gaps = 8/148 (5%)

Query: 191 SSQGLISTYLHTSPQPGLGRIAGILSLEVDNGNT-RVDALQRVGSELAMHVVAAKPL-FL 248
           +S+G I +Y+H S      RI  ++ +  +     R +  + +  +LAM  VA   + ++
Sbjct: 810 ASEGRIGSYIHDS------RIGVLIEVNCETDFVGRSEKFKELVDDLAMQAVANPQVQYV 863

Query: 249 TKELVSSEALENEREVLKSQAEASGKPQMAINKMVEGRLRKYFEEVVLMEQKFILNDALN 308
           + E +  E  + E+E+   + +   KP+    K+VEGR+ K   E  L+EQ +I +D++ 
Sbjct: 864 SIEDIPEEIKQKEKEIEMQREDLLSKPENIREKIVEGRISKRLGEWALLEQPYIKDDSVL 923

Query: 309 VKTVLDNLSKEVGSSVRIGSFLRMEVGE 336
           VK ++      +G ++++  F++  +GE
Sbjct: 924 VKDLVKQTVATLGENIKVRRFVKFTLGE 951


>AT4G29060.2 | Symbols: emb2726 | elongation factor Ts family
           protein | chr4:14317744-14321315 FORWARD LENGTH=709
          Length = 709

 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 1/85 (1%)

Query: 37  LVKQLRERTSAPIKDVKAALVDSNWDIEEAQKELRKRGKVLASKKSSRTASEGLL-ALAH 95
           LVKQLRE T A + D K AL +S  D+ +AQ+ LRK+G   A KK+SR  SEG + A  H
Sbjct: 523 LVKQLREETGAGMMDCKNALSESEGDMVKAQEYLRKKGLASADKKASRATSEGRIGAYIH 582

Query: 96  DRTRAALVELNCETDFVARNEIFQH 120
           D     L+E+NCETDFV+R +IF+ 
Sbjct: 583 DSRIGVLLEVNCETDFVSRGDIFKE 607



 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 12/148 (8%)

Query: 190 ASSQGLISTYLHTSPQPGLGRIAGILSLEVDNGN-TRVDALQRVGSELAMHVVAAKPLFL 248
           A+S+G I  Y+H S      RI  +L +  +    +R D  + +  +LAM V      ++
Sbjct: 571 ATSEGRIGAYIHDS------RIGVLLEVNCETDFVSRGDIFKELVDDLAMQV-----QYV 619

Query: 249 TKELVSSEALENEREVLKSQAEASGKPQMAINKMVEGRLRKYFEEVVLMEQKFILNDALN 308
           + E +  E  + E+E+   + +   KP+    K+VEGR+ K   E  L+EQ +I +D++ 
Sbjct: 620 SIEDIPEEIKQKEKEIEMQREDLLSKPENIREKIVEGRISKRLGEWALLEQPYIKDDSVL 679

Query: 309 VKTVLDNLSKEVGSSVRIGSFLRMEVGE 336
           VK ++      +G ++++  F++  +GE
Sbjct: 680 VKDLVKQTVATLGENIKVRRFVKFTLGE 707