Miyakogusa Predicted Gene

Lj2g3v0917310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0917310.1 Non Chatacterized Hit- tr|I3SHH6|I3SHH6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,Ribosomal_L22,Ribosomal protein L22/L17; no
description,Ribosomal protein L22/L17; seg,NULL; CHLOROP,CUFF.35741.1
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATCG00810.1 | Symbols: RPL22 | ribosomal protein L22 | chrC:8346...   118   1e-27

>ATCG00810.1 | Symbols: RPL22 | ribosomal protein L22 |
           chrC:83467-83949 REVERSE LENGTH=160
          Length = 160

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 67/85 (78%)

Query: 73  QETNQQYVEAYAVGRHIRTSADKARRVIDQIRGRPYEETLMILELMPYRACEPILKIVFS 132
           +   + Y E YA+G++I  SA KARRVIDQIRGR YEE LMILELMPYR C PI K+V+S
Sbjct: 4   KRKKKSYTEVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYS 63

Query: 133 AGANASNNLGLSKSSLVISKAEVNE 157
           A ANAS+N G  +++LVISKAEVN+
Sbjct: 64  AAANASHNKGFKETNLVISKAEVNQ 88