Miyakogusa Predicted Gene

Lj2g3v0917250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0917250.1 CUFF.35772.1
         (397 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47680.1 | Symbols:  | DNA binding | chr3:17577483-17578391 R...    90   3e-18
AT5G41220.1 | Symbols: ATGSTT3, GST10C, GSTT3 | glutathione S-tr...    86   5e-17
AT5G41240.1 | Symbols: ATGSTT2, GST10B, GSTT2 | glutathione S-tr...    73   4e-13
AT1G36675.1 | Symbols:  | glycine-rich protein | chr1:13867568-1...    64   2e-10
AT2G10975.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...    59   7e-09

>AT3G47680.1 | Symbols:  | DNA binding | chr3:17577483-17578391
           REVERSE LENGTH=302
          Length = 302

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 4/127 (3%)

Query: 147 TPKSKKTHAPAWNTAQNMVLISGWINCGTSSVVGKNQKGETFWRDIAEYCNEHCSFD--P 204
           TPK K+     W+  +++VL+S W+N    +V+G  QKG  FW  IA Y       +   
Sbjct: 40  TPKVKRERRK-WSAGEDLVLVSAWLNTSKDAVIGNEQKGYAFWSRIAAYYGASPKLNGVE 98

Query: 205 PRDGIACRNRWNYMNKILGKWIGAYDAAKRQQGSGWSDNDVLAKAQELFACGKNVQFTLM 264
            R+    + RW  +N+ +GK++G+Y+AA +Q+ SG +D+DV+A A E++   ++ +FTL 
Sbjct: 99  KRETGHIKQRWTKINEGVGKFVGSYEAATKQKSSGQNDDDVVALAHEIYNS-EHGKFTLE 157

Query: 265 EEWIALR 271
             W  LR
Sbjct: 158 HAWRVLR 164


>AT5G41220.1 | Symbols: ATGSTT3, GST10C, GSTT3 | glutathione
           S-transferase THETA 3 | chr5:16494560-16496969 REVERSE
           LENGTH=590
          Length = 590

 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 9/159 (5%)

Query: 125 GPE--FPEFSTQVNLGDGSADNEVTPKS--KKTHAPAWNTAQNMVLISGWINCGTSSVVG 180
           GP+    +FST   +G+ S D  +   +  ++ H   W+ A++ +LIS W+N     +V 
Sbjct: 239 GPQSKIIQFST---IGEKSDDPNLVQNTTDRRKHRRKWSRAEDAILISAWLNTSKDPIVD 295

Query: 181 KNQKGETFWRDIAEYCNEHCSFD--PPRDGIACRNRWNYMNKILGKWIGAYDAAKRQQGS 238
              K   FW+ I  Y N   S    P R+   C+ RW+ +N  + K++G YD A  Q+ S
Sbjct: 296 NEHKACAFWKRIGAYFNNSASLANLPKREPSHCKQRWSKLNDKVCKFVGCYDQALNQRSS 355

Query: 239 GWSDNDVLAKAQELFACGKNVQFTLMEEWIALRDLPRFC 277
           G S++DV   A +++       FTL   W  LR   ++C
Sbjct: 356 GQSEDDVFQVAYQVYTNNYKSNFTLEHAWRELRHSKKWC 394


>AT5G41240.1 | Symbols: ATGSTT2, GST10B, GSTT2 | glutathione
           S-transferase THETA 2 | chr5:16498293-16500811 REVERSE
           LENGTH=591
          Length = 591

 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 4/131 (3%)

Query: 151 KKTHAPAWNTAQNMVLISGWINCGTSS--VVGKNQKGETFWRDIAEYCNEHCSFD--PPR 206
           +K     W+   +++LIS W+N       VV   Q+  TFW+ I  + +   S    P R
Sbjct: 266 RKARRRKWSPPDDVILISAWLNTSKDRKVVVYDEQQAHTFWKRIGAHVSNSASLANLPKR 325

Query: 207 DGIACRNRWNYMNKILGKWIGAYDAAKRQQGSGWSDNDVLAKAQELFACGKNVQFTLMEE 266
           +   CR RW  +N  + K++G YD A  Q+ SG S++DV   A +L+       F L   
Sbjct: 326 EWNHCRQRWRKINDYVCKFVGCYDQALNQRASGQSEDDVFQVAYQLYYNNYMSNFKLEHA 385

Query: 267 WIALRDLPRFC 277
           W  LR   ++C
Sbjct: 386 WRELRHNKKWC 396


>AT1G36675.1 | Symbols:  | glycine-rich protein |
           chr1:13867568-13869490 FORWARD LENGTH=268
          Length = 268

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 67/178 (37%), Gaps = 50/178 (28%)

Query: 87  SSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRANFPSVDGPEFPEFSTQVNLGDGSADNEV 146
           SS + N  P +GS+  PS    S    PM      +V   EFPEFSTQ+ LG  S  +E 
Sbjct: 2   SSAITNHRPYHGSIMSPSSQAPSYSSTPMGNETNTNVGATEFPEFSTQMALGVMSGVHET 61

Query: 147 TPKSK-----KTHAPAWNTAQNMVLISGWINCGTSSVVGKNQKGETFWRDIAEYCNEHCS 201
            P  +      + +  W T QN+VL+S WI                              
Sbjct: 62  IPNEEDLTCNHSRSSKWTTDQNLVLLSRWIK----------------------------- 92

Query: 202 FDPPRDGIACRNRWNYMNKILGKWIGAYDAAKRQQGSGWSDNDVLAKAQELFACGKNV 259
                             +I+       D  KR Q SGWS + VLAKA EL++   N 
Sbjct: 93  ----------------YEQIVSLVETKKDNVKRMQQSGWSKDGVLAKAHELYSNAGNT 134


>AT2G10975.1 | Symbols:  | unknown protein; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr2:4335137-4335909 FORWARD LENGTH=133
          Length = 133

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 27/107 (25%)

Query: 298 DACGSTTIGSIPRPMGREAAXXXXXXXXXXXXXXXXXXXXXXXXDLKAQEIARIDKLTMV 357
           DA  S ++GS  RPM R+AA                           AQE+ R++K+TM+
Sbjct: 47  DASDSNSVGSSARPMERDAAKKKLKKK--------------------AQELDRLEKITMM 86

Query: 358 QEQTNQLMK-------TNLYLKLSSEEDLDDRKKELLSKLAQDLFGN 397
             +TNQL+K         ++++L+ +E+LDD+ K+LL +L+ DLFGN
Sbjct: 87  HSETNQLIKEKTHAKKMKMFIELTEKENLDDKSKKLLQQLSHDLFGN 133