Miyakogusa Predicted Gene

Lj2g3v0916180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0916180.1 tr|B9I8E0|B9I8E0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_807105 PE=4 SV=1,65.96,1e-17,
,CUFF.35730.1
         (125 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08580.1 | Symbols:  | unknown protein; Has 39 Blast hits to ...    87   2e-18

>AT1G08580.1 | Symbols:  | unknown protein; Has 39 Blast hits to
          39 proteins in 15 species: Archae - 0; Bacteria - 0;
          Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
          Eukaryotes - 4 (source: NCBI BLink). |
          chr1:2715296-2716351 REVERSE LENGTH=123
          Length = 123

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 54/82 (65%)

Query: 1  MAKFNVVQXXXXXXXXXXXXXIHGDPTTGKLKVRTQPQSLSGKRKRKLFNYWRREQKEAL 60
          MAK+N +              IHGDP T KLK RT   S+SGKR+RKL   WRREQK+ +
Sbjct: 1  MAKYNEIAKKKREAKADRKRAIHGDPLTNKLKTRTPVPSVSGKRQRKLLRKWRREQKDMV 60

Query: 61 QNGVVTMEDVQMAVAEGATKDA 82
          + G+VTMEDV+MA A+ A++D+
Sbjct: 61 EKGLVTMEDVEMASAQAASEDS 82