Miyakogusa Predicted Gene

Lj2g3v0914840.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0914840.1 Non Chatacterized Hit- tr|I1J4A0|I1J4A0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,73.35,0,CemA,Chloroplast envelope membrane protein, CemA;
seg,NULL; coiled-coil,NULL,CUFF.35701.1
         (431 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31040.1 | Symbols:  | CemA-like proton extrusion protein-rel...   431   e-121
ATCG00530.1 | Symbols: YCF10 | CemA-like proton extrusion protei...    68   1e-11

>AT4G31040.1 | Symbols:  | CemA-like proton extrusion
           protein-related | chr4:15111811-15113881 REVERSE
           LENGTH=438
          Length = 438

 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 202/259 (77%), Positives = 236/259 (91%), Gaps = 2/259 (0%)

Query: 173 GLVQSVRSYLFGREEDDDDMLYEDRVFQYASSNSAKFLAVLIIIPWAIDFVVHDYVLMPF 232
           GLV+ VR  + G EE+D  +LYEDR+F+YASS SAKFLAVLI+IPWA+DF+ HDY+LMPF
Sbjct: 182 GLVKMVRDMVLGAEEED--ILYEDRIFRYASSKSAKFLAVLILIPWALDFLAHDYLLMPF 239

Query: 233 LDRYVKTVPLAAQMLDVRRGQKLRIVDELKIERGRFQLEVEIGKSPPLSDDELWLELRHK 292
           LDRYVKTVPLAAQ LDVRR QKL +V EL  E+ R++LEVEIGKSPPLSDD+LW E+R K
Sbjct: 240 LDRYVKTVPLAAQTLDVRRNQKLEMVKELNREKARYRLEVEIGKSPPLSDDDLWWEMRGK 299

Query: 293 ALDLRDEWRLENRSAFANIWSDMVYGISLFILLYFNKNKVALLKFTGYKIINNISDTGKA 352
           AL+LRDEWRLENR AFANIWSDMV+GISLF+LLY N+ +VALLKFTGYKIINNISDTGKA
Sbjct: 300 ALELRDEWRLENRKAFANIWSDMVFGISLFVLLYANQGRVALLKFTGYKIINNISDTGKA 359

Query: 353 FLVILITDIFLGYHSESGWQTLLEVIVEHYGLEIDQSAIVIFVCLIPVVIDACVKLWLFK 412
           FL+ILITDIFLGYHSESGW+TLLE+I+EHYGLE++QS I IF+CL+PV++DACVKLWLFK
Sbjct: 360 FLIILITDIFLGYHSESGWETLLEIIMEHYGLEVEQSTITIFICLVPVIMDACVKLWLFK 419

Query: 413 FLPQLSPKVANIFQEMKRH 431
           FLP+LSP+V+NIFQEMKRH
Sbjct: 420 FLPRLSPRVSNIFQEMKRH 438


>ATCG00530.1 | Symbols: YCF10 | CemA-like proton extrusion
           protein-related | chrC:60741-61430 FORWARD LENGTH=229
          Length = 229

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 110/224 (49%), Gaps = 11/224 (4%)

Query: 209 FLAVLIIIPWAIDFVVHDYVLMPFLDRYVKTVPLAAQMLDVRRGQKLRIVDELKIERGRF 268
           FL++ + +PW I    +   L  ++  +  T      + D++    L    +L+     F
Sbjct: 13  FLSI-VFLPWLISLCCNK-SLKTWITNWWNTRQCETFLNDIQEKSFLEKFIQLE---ELF 67

Query: 269 QLEVEIGKSPPLSDDELWLELRHKALD---LRDEWRLENRSAFANIWSDMVYGISLFILL 325
           QL+  I + P  +  +  L +  + +    + +E+ +     F+   ++++  + L    
Sbjct: 68  QLDEMIKEYPETNLQQFRLGIHKETIQFIKIHNEYNIHTILHFS---TNLISFVILSGYS 124

Query: 326 YFNKNKVALLKFTGYKIINNISDTGKAFLVILITDIFLGYHSESGWQTLLEVIVEHYGLE 385
           ++ K K+ +L     + + N+SDT KAF ++L+TD+ +G+HS  GW+ ++  I + +G  
Sbjct: 125 FWGKEKLFILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGYIYKDFGFA 184

Query: 386 IDQSAIVIFVCLIPVVIDACVKLWLFKFLPQLSPKVANIFQEMK 429
             +  +   V   PV++D   K W+F++L ++SP +  I+  + 
Sbjct: 185 HYEQILSGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHAIN 228