Miyakogusa Predicted Gene
- Lj2g3v0914840.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0914840.1 Non Chatacterized Hit- tr|I1J4A0|I1J4A0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,73.35,0,CemA,Chloroplast envelope membrane protein, CemA;
seg,NULL; coiled-coil,NULL,CUFF.35701.1
(431 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31040.1 | Symbols: | CemA-like proton extrusion protein-rel... 431 e-121
ATCG00530.1 | Symbols: YCF10 | CemA-like proton extrusion protei... 68 1e-11
>AT4G31040.1 | Symbols: | CemA-like proton extrusion
protein-related | chr4:15111811-15113881 REVERSE
LENGTH=438
Length = 438
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/259 (77%), Positives = 236/259 (91%), Gaps = 2/259 (0%)
Query: 173 GLVQSVRSYLFGREEDDDDMLYEDRVFQYASSNSAKFLAVLIIIPWAIDFVVHDYVLMPF 232
GLV+ VR + G EE+D +LYEDR+F+YASS SAKFLAVLI+IPWA+DF+ HDY+LMPF
Sbjct: 182 GLVKMVRDMVLGAEEED--ILYEDRIFRYASSKSAKFLAVLILIPWALDFLAHDYLLMPF 239
Query: 233 LDRYVKTVPLAAQMLDVRRGQKLRIVDELKIERGRFQLEVEIGKSPPLSDDELWLELRHK 292
LDRYVKTVPLAAQ LDVRR QKL +V EL E+ R++LEVEIGKSPPLSDD+LW E+R K
Sbjct: 240 LDRYVKTVPLAAQTLDVRRNQKLEMVKELNREKARYRLEVEIGKSPPLSDDDLWWEMRGK 299
Query: 293 ALDLRDEWRLENRSAFANIWSDMVYGISLFILLYFNKNKVALLKFTGYKIINNISDTGKA 352
AL+LRDEWRLENR AFANIWSDMV+GISLF+LLY N+ +VALLKFTGYKIINNISDTGKA
Sbjct: 300 ALELRDEWRLENRKAFANIWSDMVFGISLFVLLYANQGRVALLKFTGYKIINNISDTGKA 359
Query: 353 FLVILITDIFLGYHSESGWQTLLEVIVEHYGLEIDQSAIVIFVCLIPVVIDACVKLWLFK 412
FL+ILITDIFLGYHSESGW+TLLE+I+EHYGLE++QS I IF+CL+PV++DACVKLWLFK
Sbjct: 360 FLIILITDIFLGYHSESGWETLLEIIMEHYGLEVEQSTITIFICLVPVIMDACVKLWLFK 419
Query: 413 FLPQLSPKVANIFQEMKRH 431
FLP+LSP+V+NIFQEMKRH
Sbjct: 420 FLPRLSPRVSNIFQEMKRH 438
>ATCG00530.1 | Symbols: YCF10 | CemA-like proton extrusion
protein-related | chrC:60741-61430 FORWARD LENGTH=229
Length = 229
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 110/224 (49%), Gaps = 11/224 (4%)
Query: 209 FLAVLIIIPWAIDFVVHDYVLMPFLDRYVKTVPLAAQMLDVRRGQKLRIVDELKIERGRF 268
FL++ + +PW I + L ++ + T + D++ L +L+ F
Sbjct: 13 FLSI-VFLPWLISLCCNK-SLKTWITNWWNTRQCETFLNDIQEKSFLEKFIQLE---ELF 67
Query: 269 QLEVEIGKSPPLSDDELWLELRHKALD---LRDEWRLENRSAFANIWSDMVYGISLFILL 325
QL+ I + P + + L + + + + +E+ + F+ ++++ + L
Sbjct: 68 QLDEMIKEYPETNLQQFRLGIHKETIQFIKIHNEYNIHTILHFS---TNLISFVILSGYS 124
Query: 326 YFNKNKVALLKFTGYKIINNISDTGKAFLVILITDIFLGYHSESGWQTLLEVIVEHYGLE 385
++ K K+ +L + + N+SDT KAF ++L+TD+ +G+HS GW+ ++ I + +G
Sbjct: 125 FWGKEKLFILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGYIYKDFGFA 184
Query: 386 IDQSAIVIFVCLIPVVIDACVKLWLFKFLPQLSPKVANIFQEMK 429
+ + V PV++D K W+F++L ++SP + I+ +
Sbjct: 185 HYEQILSGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHAIN 228