Miyakogusa Predicted Gene
- Lj2g3v0914370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0914370.1 Non Chatacterized Hit- tr|I1KJW6|I1KJW6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26828
PE,80.11,0,Auxin_resp,Auxin response factor; AUX_IAA,AUX/IAA protein;
B3,B3 DNA binding domain; DNA-binding
pse,NODE_27013_length_4605_cov_219.492935.path1.1
(1042 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 533 e-151
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 503 e-142
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 498 e-140
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 498 e-140
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 414 e-115
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 414 e-115
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 393 e-109
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 390 e-108
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 390 e-108
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 299 8e-81
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 299 8e-81
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 299 8e-81
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 298 1e-80
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 285 1e-76
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 283 5e-76
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 283 5e-76
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 283 5e-76
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 278 1e-74
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 256 5e-68
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 255 1e-67
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 255 1e-67
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 241 2e-63
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 239 7e-63
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 239 7e-63
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 239 9e-63
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 229 1e-59
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 222 9e-58
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 221 2e-57
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 219 8e-57
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 218 2e-56
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 212 1e-54
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 209 7e-54
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 206 1e-52
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 204 3e-52
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 179 7e-45
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 179 9e-45
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 166 7e-41
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 99 2e-20
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 62 3e-09
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 60 6e-09
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 60 6e-09
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 59 1e-08
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 59 2e-08
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 58 3e-08
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 58 4e-08
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 58 4e-08
AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor fam... 57 8e-08
AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor fam... 56 1e-07
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 56 1e-07
AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor fam... 56 1e-07
AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor fam... 56 1e-07
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 55 2e-07
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 55 2e-07
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 55 2e-07
AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor ... 55 2e-07
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 55 2e-07
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 54 4e-07
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 54 4e-07
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 54 6e-07
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 54 7e-07
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 51 5e-06
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 51 5e-06
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 50 6e-06
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 533 bits (1373), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/373 (71%), Positives = 299/373 (80%), Gaps = 5/373 (1%)
Query: 1 MTLQPVPSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPL 60
MTLQPV +D++ALL SD+ LK ++ EFFCK LTASDTSTHGGFSVPRRAAEKIFPPL
Sbjct: 96 MTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPL 155
Query: 61 DFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD 120
DFSMQPPAQE+ A+DLHDT WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLF+RD
Sbjct: 156 DFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRD 215
Query: 121 EKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEF 180
EK QL+LGIRRANRQ +SSSV+SSDSMHIGIL N+SPFTIF+NPRASPSEF
Sbjct: 216 EKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEF 275
Query: 181 VIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQ 240
V+PLAKY KA+Y+ Q+S GMRFRMMFETED G RRYMGT+TG++DLDPVRWK SQWRNLQ
Sbjct: 276 VVPLAKYNKALYA-QVSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQ 334
Query: 241 VGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGLHDDESSDFDNLFKRT 300
VGWDESTAG++ SRVSIWEIEPV PF+ICPPPFFR K PRQPG+ DDE D +N FKR
Sbjct: 335 VGWDESTAGDRPSRVSIWEIEPVITPFYICPPPFFRPKYPRQPGMPDDE-LDMENAFKRA 393
Query: 301 MPWLGDDMSMKDPQG--LPGLSLVQWMNLQQNPASANSLQPNYVPSFSGSVL-QNLPGAD 357
MPW+G+D MKD Q PGLSLVQWM++QQN + S P + S L N D
Sbjct: 394 MPWMGEDFGMKDAQSSMFPGLSLVQWMSMQQNNPLSGSATPQLPSALSSFNLPNNFASND 453
Query: 358 FHRQLGFSSPQLS 370
+ L F SP LS
Sbjct: 454 PSKLLNFQSPNLS 466
Score = 202 bits (515), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 185/338 (54%), Gaps = 52/338 (15%)
Query: 713 AQSAATILSSSALETVSSNANLLKDLHPHSEVKASLNISKNQNQGNFVSQTYLNSGAAPT 772
Q+A+ S S E S N +++L+ +E + S + ++ G + +A T
Sbjct: 775 GQAASVSASDSVFERAS---NPVQELYTKTESRISQGMMNMKSAGE-----HFRFKSAVT 826
Query: 773 DCLDTSSS-TSVCLSQNDVHMHQINNPLSYNPQSMFFRDNSRDGEVQADG-RSNIPYVNN 830
D +D S++ T+ C Q PL P F DG+ Q+ R+N+ + N
Sbjct: 827 DQIDVSTAGTTYCPDVVGPVQQQQTFPL---PSFGF------DGDCQSHHPRNNLAFPGN 877
Query: 831 IDSQMRMPPNTDSDLTKGTLGLAKDLSSNFSSGGMLGNYENN-KDAQQELSSSMVS-QTF 888
+++ +T L KD + ++ NY N +D + ELSS+ +S Q+F
Sbjct: 878 LEA-----------VTSDPLYSQKDFQN------LVPNYGNTPRDIETELSSAAISSQSF 920
Query: 889 GVPDMTFNSIDST----IDDSSFLNGDP-WGXXXXXXXXXXXFQRMRTYTKVYKRGAVGR 943
G+P + F S I+DS +NG W QRMRTYTKV KRG+VGR
Sbjct: 921 GIPSIPFKPGCSNEVGGINDSGIMNGGGLWPNQT---------QRMRTYTKVQKRGSVGR 971
Query: 944 SIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNC 1003
SID+ RYSGY+EL+ DLAR FGIEGQLED WKLVY DHE D+LLVGDDPWEEFVNC
Sbjct: 972 SIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNC 1031
Query: 1004 VRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGN 1041
V+ IKILS EVQQMSLDGD + NQACS +D GN
Sbjct: 1032 VQNIKILSSVEVQQMSLDGDLAAIPTTNQACSETDSGN 1069
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 503 bits (1294), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/391 (65%), Positives = 302/391 (77%), Gaps = 15/391 (3%)
Query: 1 MTLQPVPSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPL 60
MTLQPV +D+DALL SD+ LK ++ EFFCK LTASDTSTHGGFSVPRRAAEKIFP L
Sbjct: 97 MTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPAL 156
Query: 61 DFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD 120
DFSMQPP QEL A+D+HD WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRD
Sbjct: 157 DFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRD 216
Query: 121 EKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEF 180
K QLLLGIRRANRQ +SSSV+SSDSMHIG+L NNSPFTIFYNPRA+P+EF
Sbjct: 217 GKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEF 276
Query: 181 VIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQ 240
V+PLAKY KA+Y+ Q+S GMRFRM+FETE+ G RRYMGT+TG++DLDPVRWKNSQWRNLQ
Sbjct: 277 VVPLAKYTKAMYA-QVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQ 335
Query: 241 VGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGLHDDESSDFDNLFKRT 300
+GWDES AG++ SRVS+W+IEPV PF+ICPPPFFR + QPG+ DDE +D ++ KR
Sbjct: 336 IGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFRPRFSGQPGMPDDE-TDMESALKRA 394
Query: 301 MPWLGDDMSMKDPQG--LPGLSLVQWMNLQQN----PASANSLQPNYVPSF---SGSVLQ 351
MPWL + + MKDP PGLSLVQWMN+QQ P++A QP + PS + ++
Sbjct: 395 MPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQLPSAA--AQPGFFPSMLSPTAALHN 452
Query: 352 NLPGADF-HRQLGFSSPQLS-QPHNVPFNAQ 380
NL G D + L F +P N+ FN Q
Sbjct: 453 NLGGTDDPSKLLSFQTPHGGISSSNLQFNKQ 483
Score = 207 bits (526), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 132/205 (64%), Gaps = 12/205 (5%)
Query: 840 NTDSDLTKGTLGLAKDLSSNFSSGGMLGNYEN-NKDAQQELSSSMV-SQTFGVPDMTFNS 897
N D+ TL L++ S ML NY D E+S+S V +Q+FGVP++ S
Sbjct: 955 NVDNGFVPDTL-LSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVRTQSFGVPNVPAIS 1013
Query: 898 IDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAVGRSIDIARYSGYEELK 957
D ++D+ L G W QRMRTYTKV KRG+VGRSID+ RY GY+EL+
Sbjct: 1014 NDLAVNDAGVLGGGLWPAQT---------QRMRTYTKVQKRGSVGRSIDVNRYRGYDELR 1064
Query: 958 QDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQ 1017
DLAR FGIEGQLED Q WKLVYVDHE D+LLVGDDPWEEFVNCV+ IKILS EVQQ
Sbjct: 1065 HDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQ 1124
Query: 1018 MSLDGDFGSGGLPNQACSSSDGGNT 1042
MSLDG+F + NQACS D GN
Sbjct: 1125 MSLDGNFAGVPVTNQACSGGDSGNA 1149
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 498 bits (1281), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/392 (65%), Positives = 302/392 (77%), Gaps = 16/392 (4%)
Query: 1 MTLQPVPSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPL 60
MTLQPV +D+DALL SD+ LK ++ EFFCK LTASDTSTHGGFSVPRRAAEKIFP L
Sbjct: 97 MTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPAL 156
Query: 61 DFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD 120
DFSMQPP QEL A+D+HD WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRD
Sbjct: 157 DFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRD 216
Query: 121 EKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPR-ASPSE 179
K QLLLGIRRANRQ +SSSV+SSDSMHIG+L NNSPFTIFYNPR A+P+E
Sbjct: 217 GKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAE 276
Query: 180 FVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNL 239
FV+PLAKY KA+Y+ Q+S GMRFRM+FETE+ G RRYMGT+TG++DLDPVRWKNSQWRNL
Sbjct: 277 FVVPLAKYTKAMYA-QVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNL 335
Query: 240 QVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGLHDDESSDFDNLFKR 299
Q+GWDES AG++ SRVS+W+IEPV PF+ICPPPFFR + QPG+ DDE +D ++ KR
Sbjct: 336 QIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFRPRFSGQPGMPDDE-TDMESALKR 394
Query: 300 TMPWLGDDMSMKDPQG--LPGLSLVQWMNLQQN----PASANSLQPNYVPSF---SGSVL 350
MPWL + + MKDP PGLSLVQWMN+QQ P++A QP + PS + ++
Sbjct: 395 AMPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQLPSAA--AQPGFFPSMLSPTAALH 452
Query: 351 QNLPGADF-HRQLGFSSPQLS-QPHNVPFNAQ 380
NL G D + L F +P N+ FN Q
Sbjct: 453 NNLGGTDDPSKLLSFQTPHGGISSSNLQFNKQ 484
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 131/204 (64%), Gaps = 12/204 (5%)
Query: 840 NTDSDLTKGTLGLAKDLSSNFSSGGMLGNYEN-NKDAQQELSSSMV-SQTFGVPDMTFNS 897
N D+ TL L++ S ML NY D E+S+S V +Q+FGVP++ S
Sbjct: 956 NVDNGFVPDTL-LSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVRTQSFGVPNVPAIS 1014
Query: 898 IDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAVGRSIDIARYSGYEELK 957
D ++D+ L G W QRMRTYTKV KRG+VGRSID+ RY GY+EL+
Sbjct: 1015 NDLAVNDAGVLGGGLWPAQT---------QRMRTYTKVQKRGSVGRSIDVNRYRGYDELR 1065
Query: 958 QDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQ 1017
DLAR FGIEGQLED Q WKLVYVDHE D+LLVGDDPWEEFVNCV+ IKILS EVQQ
Sbjct: 1066 HDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQ 1125
Query: 1018 MSLDGDFGSGGLPNQACSSSDGGN 1041
MSLDG+F + NQACS + N
Sbjct: 1126 MSLDGNFAGVPVTNQACSGATSFN 1149
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 498 bits (1281), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/392 (65%), Positives = 302/392 (77%), Gaps = 16/392 (4%)
Query: 1 MTLQPVPSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPL 60
MTLQPV +D+DALL SD+ LK ++ EFFCK LTASDTSTHGGFSVPRRAAEKIFP L
Sbjct: 97 MTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPAL 156
Query: 61 DFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD 120
DFSMQPP QEL A+D+HD WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRD
Sbjct: 157 DFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRD 216
Query: 121 EKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPR-ASPSE 179
K QLLLGIRRANRQ +SSSV+SSDSMHIG+L NNSPFTIFYNPR A+P+E
Sbjct: 217 GKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAE 276
Query: 180 FVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNL 239
FV+PLAKY KA+Y+ Q+S GMRFRM+FETE+ G RRYMGT+TG++DLDPVRWKNSQWRNL
Sbjct: 277 FVVPLAKYTKAMYA-QVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNL 335
Query: 240 QVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGLHDDESSDFDNLFKR 299
Q+GWDES AG++ SRVS+W+IEPV PF+ICPPPFFR + QPG+ DDE +D ++ KR
Sbjct: 336 QIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFRPRFSGQPGMPDDE-TDMESALKR 394
Query: 300 TMPWLGDDMSMKDPQG--LPGLSLVQWMNLQQN----PASANSLQPNYVPSF---SGSVL 350
MPWL + + MKDP PGLSLVQWMN+QQ P++A QP + PS + ++
Sbjct: 395 AMPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQLPSAA--AQPGFFPSMLSPTAALH 452
Query: 351 QNLPGADF-HRQLGFSSPQLS-QPHNVPFNAQ 380
NL G D + L F +P N+ FN Q
Sbjct: 453 NNLGGTDDPSKLLSFQTPHGGISSSNLQFNKQ 484
Score = 207 bits (526), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 132/205 (64%), Gaps = 12/205 (5%)
Query: 840 NTDSDLTKGTLGLAKDLSSNFSSGGMLGNYEN-NKDAQQELSSSMV-SQTFGVPDMTFNS 897
N D+ TL L++ S ML NY D E+S+S V +Q+FGVP++ S
Sbjct: 956 NVDNGFVPDTL-LSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVRTQSFGVPNVPAIS 1014
Query: 898 IDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAVGRSIDIARYSGYEELK 957
D ++D+ L G W QRMRTYTKV KRG+VGRSID+ RY GY+EL+
Sbjct: 1015 NDLAVNDAGVLGGGLWPAQT---------QRMRTYTKVQKRGSVGRSIDVNRYRGYDELR 1065
Query: 958 QDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQ 1017
DLAR FGIEGQLED Q WKLVYVDHE D+LLVGDDPWEEFVNCV+ IKILS EVQQ
Sbjct: 1066 HDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQ 1125
Query: 1018 MSLDGDFGSGGLPNQACSSSDGGNT 1042
MSLDG+F + NQACS D GN
Sbjct: 1126 MSLDGNFAGVPVTNQACSGGDSGNA 1150
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/395 (57%), Positives = 270/395 (68%), Gaps = 35/395 (8%)
Query: 1 MTLQPVPSFD-KDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPP 59
MTLQP+ + + KD L ++L + S +P +FCK LTASDTSTHGGFSVPRRAAEK+FPP
Sbjct: 97 MTLQPLNAQEQKDPYLPAELGVPSRQPT-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPP 155
Query: 60 LDFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR 119
LD+S QPPAQEL ARDLHD W FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI
Sbjct: 156 LDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW 215
Query: 120 DEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSE 179
++K QLLLGIRRANR T + SSVLSSDSMH+G+L NS FTIFYNPRASPSE
Sbjct: 216 NDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSE 275
Query: 180 FVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNL 239
FVIPLAKY KAVY ++S GMRFRM+FETE+S RRYMGTITG+ DLDP RW NS WR++
Sbjct: 276 FVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSV 335
Query: 240 QVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPF-FRSKRPRQPGLHDDESSDFDNLFK 298
+VGWDESTAGE++ RVS+WEIEP+T F + P PF R KRP PGL F L +
Sbjct: 336 KVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRLKRPWPPGL-----PSFHGLKE 389
Query: 299 RTMPWLGDDMSMKDP----QGL-----PGLSLVQWMNLQQNPASANSLQPNYVPSFSGSV 349
M MSM P +GL G+ + WM + + + +Q + + + +
Sbjct: 390 DDM-----GMSMSSPLMWDRGLQSLNFQGMGVNPWMQPRLDTSGLLGMQNDVYQAMAAAA 444
Query: 350 LQNLPGAD----------FHRQLGFS--SPQLSQP 372
LQ++ G D F GFS SP L QP
Sbjct: 445 LQDMRGIDPAKAAASLLQFQNSPGFSMQSPSLVQP 479
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 74/92 (80%)
Query: 931 TYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVL 990
T+ KVYK G+ GRS+DI+++S Y EL+ +LAR FG+EGQLED R GW+LV+VD E DVL
Sbjct: 795 TFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVL 854
Query: 991 LVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1022
L+GDDPW EFV+ V CIKILSPQEVQQM G
Sbjct: 855 LLGDDPWPEFVSSVWCIKILSPQEVQQMGKRG 886
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/395 (57%), Positives = 270/395 (68%), Gaps = 35/395 (8%)
Query: 1 MTLQPVPSFD-KDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPP 59
MTLQP+ + + KD L ++L + S +P +FCK LTASDTSTHGGFSVPRRAAEK+FPP
Sbjct: 99 MTLQPLNAQEQKDPYLPAELGVPSRQPT-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPP 157
Query: 60 LDFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR 119
LD+S QPPAQEL ARDLHD W FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI
Sbjct: 158 LDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW 217
Query: 120 DEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSE 179
++K QLLLGIRRANR T + SSVLSSDSMH+G+L NS FTIFYNPRASPSE
Sbjct: 218 NDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSE 277
Query: 180 FVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNL 239
FVIPLAKY KAVY ++S GMRFRM+FETE+S RRYMGTITG+ DLDP RW NS WR++
Sbjct: 278 FVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSV 337
Query: 240 QVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPF-FRSKRPRQPGLHDDESSDFDNLFK 298
+VGWDESTAGE++ RVS+WEIEP+T F + P PF R KRP PGL F L +
Sbjct: 338 KVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRLKRPWPPGL-----PSFHGLKE 391
Query: 299 RTMPWLGDDMSMKDP----QGL-----PGLSLVQWMNLQQNPASANSLQPNYVPSFSGSV 349
M MSM P +GL G+ + WM + + + +Q + + + +
Sbjct: 392 DDM-----GMSMSSPLMWDRGLQSLNFQGMGVNPWMQPRLDTSGLLGMQNDVYQAMAAAA 446
Query: 350 LQNLPGAD----------FHRQLGFS--SPQLSQP 372
LQ++ G D F GFS SP L QP
Sbjct: 447 LQDMRGIDPAKAAASLLQFQNSPGFSMQSPSLVQP 481
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 74/92 (80%)
Query: 931 TYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVL 990
T+ KVYK G+ GRS+DI+++S Y EL+ +LAR FG+EGQLED R GW+LV+VD E DVL
Sbjct: 797 TFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVL 856
Query: 991 LVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1022
L+GDDPW EFV+ V CIKILSPQEVQQM G
Sbjct: 857 LLGDDPWPEFVSSVWCIKILSPQEVQQMGKRG 888
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/355 (57%), Positives = 242/355 (68%), Gaps = 10/355 (2%)
Query: 1 MTLQPVPSFDKDALLRSDLA-LKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPP 59
M+LQPV S ++D D L+ SK EFFCK LTASDTSTHGGFSVPRRAAEK+FPP
Sbjct: 128 MSLQPVHS-ERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPP 186
Query: 60 LDFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR 119
LD+S QPP QEL RDLH+ WTFRHIYRGQPKRHLLTTGWSLFV KRL AGDSVLFIR
Sbjct: 187 LDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 246
Query: 120 DEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSE 179
DEK QL++G+RRANRQ T + SSVLS+DSMHIG+L N +PF IFYNPRA P+E
Sbjct: 247 DEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAE 306
Query: 180 FVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNL 239
FVIPLAKY KA+ Q+S GMRF MMFETEDSG RRYMGTI G++DLDP+RW S+WRNL
Sbjct: 307 FVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNL 366
Query: 240 QVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGLHDDESSDFDNLFKR 299
QV WDE +K +RVS W+IE FI P KR P E +++ +L KR
Sbjct: 367 QVEWDEPGCNDKPTRVSPWDIE-TPESLFIFPSLTSGLKRQLHPSYFAGE-TEWGSLIKR 424
Query: 300 TMPWLGDDMSMKDPQG-LPGLSLVQWMNLQQNPASANSLQPNYVPSFSGSVLQNL 353
+ + D + P P ++ Q M + P + + VPSF + QN+
Sbjct: 425 PLIRVPDSANGIMPYASFPSMASEQLMKMMMRPHNNQN-----VPSFMSEMQQNI 474
Score = 147 bits (370), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 115/215 (53%), Gaps = 27/215 (12%)
Query: 824 NIPYVNNIDSQMRMPPNTDSDLTKGTLGLAKDLSSNFSSGGMLGNYENNKDAQQELSSSM 883
NI N+ S + PP +++ L D N SG ++GN NN Q++ S +
Sbjct: 682 NICMSNSTTSNILDPPLSNTVLDDFCAIKDTDFQ-NHPSGCLVGN--NNTSFAQDVQSQI 738
Query: 884 VSQTFG---------VPDMTFNSIDST----IDDSSFL---NGDPWGXXXXXXXXXXXFQ 927
S +F PD + + S+ DD S G W
Sbjct: 739 TSASFADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSKGSSWQKIATP-------- 790
Query: 928 RMRTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEG 987
R+RTYTKV K G+VGRSID+ + YEELK + FG+EG L Q GWKLVYVD+E
Sbjct: 791 RVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYES 850
Query: 988 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1022
DVLLVGDDPWEEFV CVRCI+ILSP EVQQMS +G
Sbjct: 851 DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEG 885
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/379 (54%), Positives = 255/379 (67%), Gaps = 12/379 (3%)
Query: 1 MTLQPV-PSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPP 59
MTLQP+ P K+ + +L + S +P +FCK LTASDTSTHGGFSVPRRAAEK+FPP
Sbjct: 96 MTLQPLTPEEQKETFVPIELGIPSKQPS-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPP 154
Query: 60 LDFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR 119
LD+++QPPAQEL ARDLHD W FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSV+FIR
Sbjct: 155 LDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIR 214
Query: 120 DEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSE 179
+EK QL LGIR A R T + SSVLSSDSMHIG+L NS FT+F++PRAS SE
Sbjct: 215 NEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSE 274
Query: 180 FVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNL 239
FVI L+KY KAV+ +IS GMRFRM+FETE+S RRYMGTITG++DLD VRW NS WR++
Sbjct: 275 FVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSV 334
Query: 240 QVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPF-FRSKRPRQPGLHDDESSDFDNLFK 298
+VGWDESTAGE++ RVS+WEIEP+T F + P F R KRP G D
Sbjct: 335 KVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRPWHAGTSSLPDGRGD--LG 391
Query: 299 RTMPWL---GDDMSMKDPQGLPGLSLVQWMNLQQNPASANSLQPNYVPSFSGSVLQNLPG 355
+ WL G + P P + L WM + + + + + + LQN+ G
Sbjct: 392 SGLTWLRGGGGEQQGLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGG 451
Query: 356 ADFHRQLGFSSPQLSQPHN 374
D RQ QL +PH+
Sbjct: 452 GDPLRQ---QFVQLQEPHH 467
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 930 RTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDV 989
+ + KVYK G+VGRS+DI+R+S Y EL+++L + F IEG LED R GW+LV+VD E D+
Sbjct: 705 KNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDI 764
Query: 990 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGL 1029
LL+GDDPWE FVN V IKILSP++V QM G+ GSGGL
Sbjct: 765 LLLGDDPWESFVNNVWYIKILSPEDVHQMGDHGE-GSGGL 803
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/381 (54%), Positives = 257/381 (67%), Gaps = 16/381 (4%)
Query: 1 MTLQPV-PSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPP 59
MTLQP+ P K+ + +L + S +P +FCK LTASDTSTHGGFSVPRRAAEK+FPP
Sbjct: 96 MTLQPLTPEEQKETFVPIELGIPSKQPS-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPP 154
Query: 60 LDFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR 119
LD+++QPPAQEL ARDLHD W FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSV+FIR
Sbjct: 155 LDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIR 214
Query: 120 DEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSE 179
+EK QL LGIR A R T + SSVLSSDSMHIG+L NS FT+F++PRAS SE
Sbjct: 215 NEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSE 274
Query: 180 FVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNL 239
FVI L+KY KAV+ +IS GMRFRM+FETE+S RRYMGTITG++DLD VRW NS WR++
Sbjct: 275 FVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSV 334
Query: 240 QVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPF-FRSKRPRQPGLHD--DESSDFDNL 296
+VGWDESTAGE++ RVS+WEIEP+T F + P F R KRP G D D +
Sbjct: 335 KVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRPWHAGTSSLPDGRGDLGS- 392
Query: 297 FKRTMPWL---GDDMSMKDPQGLPGLSLVQWMNLQQNPASANSLQPNYVPSFSGSVLQNL 353
+ WL G + P P + L WM + + + + + + LQN+
Sbjct: 393 ---GLTWLRGGGGEQQGLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNI 449
Query: 354 PGADFHRQLGFSSPQLSQPHN 374
G D RQ QL +PH+
Sbjct: 450 GGGDPLRQ---QFVQLQEPHH 467
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%)
Query: 930 RTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDV 989
+ + KVYK G+VGRS+DI+R+S Y EL+++L + F IEG LED R GW+LV+VD E D+
Sbjct: 705 KNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDI 764
Query: 990 LLVGDDPWE 998
LL+GDDPWE
Sbjct: 765 LLLGDDPWE 773
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 299 bits (765), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 191/281 (67%), Gaps = 1/281 (0%)
Query: 1 MTLQPVPSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPL 60
+TL P + D++A+ + + Q FCK LTASDTSTHGGFSV RR A++ PPL
Sbjct: 134 ITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 193
Query: 61 DFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD 120
D S QPP QEL A+DLH W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R
Sbjct: 194 DMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 253
Query: 121 EKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEF 180
E +L +G+RRA RQ N+ SSV+SS SMH+G+L + FT++Y PR SPSEF
Sbjct: 254 ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEF 313
Query: 181 VIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQ 240
++P +Y ++V + S GMRF+M FE E++ +R+ GTI G+ + DP RW S+WR+L+
Sbjct: 314 IVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLK 372
Query: 241 VGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPR 281
V WDE+++ + RVS W++EP AP + P P R KRPR
Sbjct: 373 VRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPR 413
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 930 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 988
R+ TKV+K+G A+GRS+D++++ YEEL +L R F G+L ++ W +VY D E D
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEEND 791
Query: 989 VLLVGDDPWEEFVNCVRCIKILSPQEVQQM 1018
++LVGDDPW+EF VR I I + +EV++M
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 299 bits (765), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 191/281 (67%), Gaps = 1/281 (0%)
Query: 1 MTLQPVPSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPL 60
+TL P + D++A+ + + Q FCK LTASDTSTHGGFSV RR A++ PPL
Sbjct: 134 ITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 193
Query: 61 DFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD 120
D S QPP QEL A+DLH W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R
Sbjct: 194 DMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 253
Query: 121 EKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEF 180
E +L +G+RRA RQ N+ SSV+SS SMH+G+L + FT++Y PR SPSEF
Sbjct: 254 ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEF 313
Query: 181 VIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQ 240
++P +Y ++V + S GMRF+M FE E++ +R+ GTI G+ + DP RW S+WR+L+
Sbjct: 314 IVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLK 372
Query: 241 VGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPR 281
V WDE+++ + RVS W++EP AP + P P R KRPR
Sbjct: 373 VRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPR 413
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 930 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 988
R+ TKV+K+G A+GRS+D++++ YEEL +L R F G+L ++ W +VY D E D
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEEND 791
Query: 989 VLLVGDDPWEEFVNCVRCIKILSPQEVQQM 1018
++LVGDDPW+EF VR I I + +EV++M
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 299 bits (765), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 191/281 (67%), Gaps = 1/281 (0%)
Query: 1 MTLQPVPSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPL 60
+TL P + D++A+ + + Q FCK LTASDTSTHGGFSV RR A++ PPL
Sbjct: 134 ITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 193
Query: 61 DFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD 120
D S QPP QEL A+DLH W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R
Sbjct: 194 DMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 253
Query: 121 EKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEF 180
E +L +G+RRA RQ N+ SSV+SS SMH+G+L + FT++Y PR SPSEF
Sbjct: 254 ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEF 313
Query: 181 VIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQ 240
++P +Y ++V + S GMRF+M FE E++ +R+ GTI G+ + DP RW S+WR+L+
Sbjct: 314 IVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLK 372
Query: 241 VGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPR 281
V WDE+++ + RVS W++EP AP + P P R KRPR
Sbjct: 373 VRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPR 413
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 930 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 988
R+ TKV+K+G A+GRS+D++++ YEEL +L R F G+L ++ W +VY D E D
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEEND 791
Query: 989 VLLVGDDPWEEFVNCVRCIKILSPQEVQQM 1018
++LVGDDPW+EF VR I I + +EV++M
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 298 bits (764), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 191/281 (67%), Gaps = 1/281 (0%)
Query: 1 MTLQPVPSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPL 60
+TL P + D++A+ + + Q FCK LTASDTSTHGGFSV RR A++ PPL
Sbjct: 134 ITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 193
Query: 61 DFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD 120
D S QPP QEL A+DLH W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R
Sbjct: 194 DMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 253
Query: 121 EKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEF 180
E +L +G+RRA RQ N+ SSV+SS SMH+G+L + FT++Y PR SPSEF
Sbjct: 254 ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEF 313
Query: 181 VIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQ 240
++P +Y ++V + S GMRF+M FE E++ +R+ GTI G+ + DP RW S+WR+L+
Sbjct: 314 IVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLK 372
Query: 241 VGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPR 281
V WDE+++ + RVS W++EP AP + P P R KRPR
Sbjct: 373 VRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPR 413
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 930 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 988
R+ TKV+K+G A+GRS+D++++ YEEL +L R F G+L ++ W +VY D E D
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEEND 791
Query: 989 VLLVGDDPWEEFVNCVRCIKILSPQEVQQM 1018
++LVGDDPW+EF VR I I + +EV++M
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/270 (51%), Positives = 185/270 (68%), Gaps = 3/270 (1%)
Query: 31 FCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIYRGQ 90
FCK LTASDTSTHGGFSV RR A+ PPLD S QPP QEL A DLH++ W FRHI+RGQ
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQ 183
Query: 91 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMH 150
P+RHLLTTGWS+FVS K+L AGD+ +F+R E ++L +G+RR RQ TNI SSV+SS SMH
Sbjct: 184 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMH 243
Query: 151 IGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETED 210
IG+L + F++FY PR S SEF++ + +Y +A + ++S GMRF+M FE E+
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEE 302
Query: 211 SGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFIC 270
+ +R+ GTI GV + W +S+WR+L+V WDE ++ + RVS WE+EP+ A
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPS 362
Query: 271 --PPPFFRSKRPRQPGLHDDESSDFDNLFK 298
P P R+KRPR PGL + D ++K
Sbjct: 363 SQPQPPQRNKRPRPPGLPSPATGPSDGVWK 392
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 927 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 985
+++R+ TKV+ +G AVGR+ID+ R YE+L + L F I+G+L + + W++VY D
Sbjct: 534 RQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDD 592
Query: 986 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGNT 1042
E D+++VGDDPW EF VR I I +P+EV+++S + + GNT
Sbjct: 593 EDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 649
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 283 bits (724), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 137/257 (53%), Positives = 180/257 (70%), Gaps = 3/257 (1%)
Query: 31 FCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIYRGQ 90
FCK LTASDTSTHGGFSV RR A+ PPLD S QPP QEL A DLH++ W FRHI+RGQ
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQ 183
Query: 91 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMH 150
P+RHLLTTGWS+FVS K+L AGD+ +F+R E ++L +G+RR RQ TNI SSV+SS SMH
Sbjct: 184 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMH 243
Query: 151 IGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETED 210
IG+L + F++FY PR S SEF++ + +Y +A + ++S GMRF+M FE E+
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEE 302
Query: 211 SGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFIC 270
+ +R+ GTI GV + W +S+WR+L+V WDE ++ + RVS WE+EP+ A
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPS 362
Query: 271 --PPPFFRSKRPRQPGL 285
P P R+KRPR PGL
Sbjct: 363 SQPQPPQRNKRPRPPGL 379
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 927 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 985
+++R+ TKV+ +G AVGR+ID+ R YE+L + L F I+G+L + + W++VY D
Sbjct: 536 RQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDD 594
Query: 986 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGNT 1042
E D+++VGDDPW EF VR I I +P+EV+++S + + GNT
Sbjct: 595 EDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 651
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 283 bits (723), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 137/257 (53%), Positives = 180/257 (70%), Gaps = 3/257 (1%)
Query: 31 FCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIYRGQ 90
FCK LTASDTSTHGGFSV RR A+ PPLD S QPP QEL A DLH++ W FRHI+RGQ
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQ 183
Query: 91 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMH 150
P+RHLLTTGWS+FVS K+L AGD+ +F+R E ++L +G+RR RQ TNI SSV+SS SMH
Sbjct: 184 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMH 243
Query: 151 IGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETED 210
IG+L + F++FY PR S SEF++ + +Y +A + ++S GMRF+M FE E+
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEE 302
Query: 211 SGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFIC 270
+ +R+ GTI GV + W +S+WR+L+V WDE ++ + RVS WE+EP+ A
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPS 362
Query: 271 --PPPFFRSKRPRQPGL 285
P P R+KRPR PGL
Sbjct: 363 SQPQPPQRNKRPRPPGL 379
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 927 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 985
+++R+ TKV+ +G AVGR+ID+ R YE+L + L F I+G+L + + W++VY D
Sbjct: 539 RQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDD 597
Query: 986 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGNT 1042
E D+++VGDDPW EF VR I I +P+EV+++S + + GNT
Sbjct: 598 EDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 654
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 283 bits (723), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 137/257 (53%), Positives = 180/257 (70%), Gaps = 3/257 (1%)
Query: 31 FCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIYRGQ 90
FCK LTASDTSTHGGFSV RR A+ PPLD S QPP QEL A DLH++ W FRHI+RGQ
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQ 183
Query: 91 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMH 150
P+RHLLTTGWS+FVS K+L AGD+ +F+R E ++L +G+RR RQ TNI SSV+SS SMH
Sbjct: 184 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMH 243
Query: 151 IGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETED 210
IG+L + F++FY PR S SEF++ + +Y +A + ++S GMRF+M FE E+
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEE 302
Query: 211 SGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFIC 270
+ +R+ GTI GV + W +S+WR+L+V WDE ++ + RVS WE+EP+ A
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPS 362
Query: 271 --PPPFFRSKRPRQPGL 285
P P R+KRPR PGL
Sbjct: 363 SQPQPPQRNKRPRPPGL 379
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 927 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 985
+++R+ TKV+ +G AVGR+ID+ R YE+L + L F I+G+L + + W++VY D
Sbjct: 539 RQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDD 597
Query: 986 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGNT 1042
E D+++VGDDPW EF VR I I +P+EV+++S + + GNT
Sbjct: 598 EDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 654
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 278 bits (712), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/268 (54%), Positives = 174/268 (64%), Gaps = 9/268 (3%)
Query: 23 SSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWT 82
S K P FCK LTASDTSTHGGFSVPRRAAE F PLD+ Q P+QEL A+DLH W
Sbjct: 169 SVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWK 228
Query: 83 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSS 142
FRHIYRGQP+RHLLTTGWS+FVS K L +GD+VLF+RDE +L LGIRRA R + S
Sbjct: 229 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDS 288
Query: 143 VLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRF 202
++ +S IL S F +FY+PRA+ +EFVIP KY ++ S + G RF
Sbjct: 289 IIEKNSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRS-PVCIGTRF 346
Query: 203 RMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEP 262
RM FE +DS RR G +TGV DLDP RW NS+WR L V WDES + + RVS WEI+P
Sbjct: 347 RMRFEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDP 406
Query: 263 -VTAPFFICPPPFFRSKRPRQP--GLHD 287
V+ P S RP++P GL D
Sbjct: 407 SVSLPHL----SIQSSPRPKRPWAGLLD 430
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Query: 930 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 988
R TKV+K+G+ VGR+ID++R +GY++L +L R F +EG L D ++ GW+++Y D E D
Sbjct: 665 RICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEK-GWRILYTDSEND 723
Query: 989 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLD 1021
+++VGDDPW +F N V I + + +EV+ + D
Sbjct: 724 MMVVGDDPWHDFCNVVWKIHLYTKEEVENANDD 756
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 256 bits (655), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 158/235 (67%), Gaps = 1/235 (0%)
Query: 28 PEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIY 87
P FCK LTASDTSTHGGFSVPRRAAE FPPLD+S P+QEL ARDLH W FRHIY
Sbjct: 156 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIY 215
Query: 88 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSD 147
RGQP+RHLLTTGWS FV+ K+L +GD+VLF+R + +L LG+RRA++ + S +
Sbjct: 216 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQ 275
Query: 148 SMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFE 207
+M+ +S F+I YNP+AS S F+IP K+ K V + GMRF+ E
Sbjct: 276 NMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVV-DYPFCIGMRFKARVE 334
Query: 208 TEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEP 262
+ED+ RR G I+G++DLDP+RW S+WR L V WD+ A + RVS WEIEP
Sbjct: 335 SEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 255 bits (652), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/258 (50%), Positives = 173/258 (67%), Gaps = 4/258 (1%)
Query: 25 KPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFR 84
+P+ F K LTASDTSTHGGFSV R+ A + PPLD + Q P QEL A D+H W F+
Sbjct: 110 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFK 169
Query: 85 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVL 144
HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RRAN Q +++ SSV+
Sbjct: 170 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVI 229
Query: 145 SSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRM 204
SS SMH+G+L + F ++Y PR S+F+I L KY +A+ S++ S GMRF+M
Sbjct: 230 SSHSMHLGVLATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKM 286
Query: 205 MFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVT 264
FE EDS RRY GT+ GV D P WK+S+WR L+V WDE + + ++VS WEIEP
Sbjct: 287 RFEGEDSPERRYSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFV 345
Query: 265 APFFICPPPFFRSKRPRQ 282
+ ++KRPRQ
Sbjct: 346 NSENVPKSVMLKNKRPRQ 363
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 930 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 988
R+ TKV +G VGR++D+ GY EL D+ + F I+G+L R R W++V+ D EGD
Sbjct: 523 RSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL--RSRNQWEIVFTDDEGD 580
Query: 989 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1019
++LVGDDPW EF N V+ I I S +EV++M+
Sbjct: 581 MMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 611
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/258 (50%), Positives = 173/258 (67%), Gaps = 4/258 (1%)
Query: 25 KPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFR 84
+P+ F K LTASDTSTHGGFSV R+ A + PPLD + Q P QEL A D+H W F+
Sbjct: 110 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFK 169
Query: 85 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVL 144
HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RRAN Q +++ SSV+
Sbjct: 170 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVI 229
Query: 145 SSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRM 204
SS SMH+G+L + F ++Y PR S+F+I L KY +A+ S++ S GMRF+M
Sbjct: 230 SSHSMHLGVLATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKM 286
Query: 205 MFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVT 264
FE EDS RRY GT+ GV D P WK+S+WR L+V WDE + + ++VS WEIEP
Sbjct: 287 RFEGEDSPERRYSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFV 345
Query: 265 APFFICPPPFFRSKRPRQ 282
+ ++KRPRQ
Sbjct: 346 NSENVPKSVMLKNKRPRQ 363
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 930 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 988
R+ TKV +G VGR++D+ GY EL D+ + F I+G+L R R W++V+ D EGD
Sbjct: 521 RSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL--RSRNQWEIVFTDDEGD 578
Query: 989 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1019
++LVGDDPW EF N V+ I I S +EV++M+
Sbjct: 579 MMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 609
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/254 (49%), Positives = 159/254 (62%), Gaps = 7/254 (2%)
Query: 31 FCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIYRGQ 90
F K LTASDTSTHGGFSV R+ A + P LD + P QEL RDLH W F+HI+RGQ
Sbjct: 128 FVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQ 187
Query: 91 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMH 150
P+RHLLTTGWS FVS KRL AGD+ +F+R E L +G+RR R + + +SV+SS SMH
Sbjct: 188 PRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMH 247
Query: 151 IGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETED 210
+G+L + F +FY PR S+F++ + KY +A+ H S G RFRM FE E+
Sbjct: 248 LGVLATASHAVRTTTIFVVFYKPRI--SQFIVGVNKYMEAI-KHGFSLGTRFRMRFEGEE 304
Query: 211 SGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFIC 270
S R + GTI G DL +W S+WR+LQV WDE T ++ +VS WEIEP A I
Sbjct: 305 SPERIFTGTIVGSGDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIS 363
Query: 271 PP---PFFRSKRPR 281
P P + KR R
Sbjct: 364 TPAQQPQSKCKRSR 377
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 927 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 985
Q R+ TKV +G AVGR++D+ Y+EL +L F I+GQL R + W +V+ D
Sbjct: 486 QTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDK--WIVVFTDD 543
Query: 986 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1019
EGD++L GDDPW EF + I I S EV++M+
Sbjct: 544 EGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT 577
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 239 bits (610), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/264 (46%), Positives = 170/264 (64%), Gaps = 8/264 (3%)
Query: 21 LKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTP 80
++ +KP + F K LTASDTSTHGGFSV R+ A + P LD + P QEL ARDLH
Sbjct: 114 VEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYE 173
Query: 81 WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNIS 140
W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E L +G+RR +Q + +
Sbjct: 174 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMP 233
Query: 141 SSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGM 200
+SV+SS SM +G+L + F +FY PR S+F+I + KY A+ + S GM
Sbjct: 234 ASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGM 290
Query: 201 RFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEI 260
R+RM FE E+S R + GTI G DL +W S+WR+LQ+ WDE ++ ++ ++VS WEI
Sbjct: 291 RYRMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEI 349
Query: 261 EPVTAPFFICPPPF---FRSKRPR 281
EP +P + P P +SKR R
Sbjct: 350 EPF-SPSALTPTPTQQQSKSKRSR 372
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 892 DMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRG-AVGRSIDIARY 950
D S+DS I DS+ DP R R KV +G AVGR++D+
Sbjct: 454 DKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRI--KVQMQGTAVGRAVDLTLL 511
Query: 951 SGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKIL 1010
Y+EL ++L + F IEG+L + + W +V+ D EGD +LVGDDPW EF + + I
Sbjct: 512 RSYDELIKELEKMFEIEGELSPKDK--WAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIY 569
Query: 1011 SPQEVQQM---SLDGDFGS 1026
EV++M SL GD G+
Sbjct: 570 PSDEVKKMRSKSLLGDKGT 588
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 239 bits (610), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/264 (46%), Positives = 170/264 (64%), Gaps = 8/264 (3%)
Query: 21 LKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTP 80
++ +KP + F K LTASDTSTHGGFSV R+ A + P LD + P QEL ARDLH
Sbjct: 135 VEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYE 194
Query: 81 WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNIS 140
W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E L +G+RR +Q + +
Sbjct: 195 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMP 254
Query: 141 SSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGM 200
+SV+SS SM +G+L + F +FY PR S+F+I + KY A+ + S GM
Sbjct: 255 ASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGM 311
Query: 201 RFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEI 260
R+RM FE E+S R + GTI G DL +W S+WR+LQ+ WDE ++ ++ ++VS WEI
Sbjct: 312 RYRMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEI 370
Query: 261 EPVTAPFFICPPPF---FRSKRPR 281
EP +P + P P +SKR R
Sbjct: 371 EPF-SPSALTPTPTQQQSKSKRSR 393
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 892 DMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRG-AVGRSIDIARY 950
D S+DS I DS+ DP R R KV +G AVGR++D+
Sbjct: 475 DKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRI--KVQMQGTAVGRAVDLTLL 532
Query: 951 SGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKIL 1010
Y+EL ++L + F IEG+L + + W +V+ D EGD +LVGDDPW EF + + I
Sbjct: 533 RSYDELIKELEKMFEIEGELSPKDK--WAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIY 590
Query: 1011 SPQEVQQM---SLDGDFGS 1026
EV++M SL GD G+
Sbjct: 591 PSDEVKKMRSKSLLGDKGT 609
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 239 bits (609), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 124/264 (46%), Positives = 170/264 (64%), Gaps = 8/264 (3%)
Query: 21 LKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTP 80
++ +KP + F K LTASDTSTHGGFSV R+ A + P LD + P QEL ARDLH
Sbjct: 27 VEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYE 86
Query: 81 WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNIS 140
W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E L +G+RR +Q + +
Sbjct: 87 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMP 146
Query: 141 SSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGM 200
+SV+SS SM +G+L + F +FY PR S+F+I + KY A+ + S GM
Sbjct: 147 ASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGM 203
Query: 201 RFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEI 260
R+RM FE E+S R + GTI G DL +W S+WR+LQ+ WDE ++ ++ ++VS WEI
Sbjct: 204 RYRMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEI 262
Query: 261 EPVTAPFFICPPPF---FRSKRPR 281
EP +P + P P +SKR R
Sbjct: 263 EPF-SPSALTPTPTQQQSKSKRSR 285
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 892 DMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRG-AVGRSIDIARY 950
D S+DS I DS+ DP R R KV +G AVGR++D+
Sbjct: 367 DKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRI--KVQMQGTAVGRAVDLTLL 424
Query: 951 SGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKIL 1010
Y+EL ++L + F IEG+L + + W +V+ D EGD +LVGDDPW EF + + I
Sbjct: 425 RSYDELIKELEKMFEIEGELSPKDK--WAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIY 482
Query: 1011 SPQEVQQM---SLDGDFGS 1026
EV++M SL GD G+
Sbjct: 483 PSDEVKKMRSKSLLGDKGT 501
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/258 (44%), Positives = 159/258 (61%), Gaps = 4/258 (1%)
Query: 25 KPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFR 84
+P F K LTASDTS +GGFSVP++ A + PPLD S PAQE+ A DLHD W FR
Sbjct: 120 RPLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFR 179
Query: 85 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVL 144
H YRG P+RH LTTGW+ F++ K+L GD ++F+R E +L +GIRRA Q NI SS++
Sbjct: 180 HNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIV 239
Query: 145 SSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRM 204
S D M G++ N F + Y PR+ S+F++ K+ AV +++ + G RF M
Sbjct: 240 SIDCMRHGVIASAKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTM 296
Query: 205 MFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVT 264
FE +D RRY GTI GV+D P WK S+WR+L+V WDE + + ++VS WEIE +
Sbjct: 297 RFEGDDFSERRYFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLV 355
Query: 265 APFFICPPPFFRSKRPRQ 282
+ ++KR R+
Sbjct: 356 PALNVPRSSLLKNKRLRE 373
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 926 FQRMRTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 984
F RT TKV +G +GR++D++ +GY++L +L + F I+GQL+ R + WK+ + D
Sbjct: 507 FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQ--WKIAFTD 564
Query: 985 HEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQ 1016
+G +LVGDDPW EF V+ I I S +EV+
Sbjct: 565 SDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 222 bits (566), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 114/258 (44%), Positives = 157/258 (60%), Gaps = 4/258 (1%)
Query: 25 KPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFR 84
+P F K LTASDTS HGGFSVP++ A + PPLD S P QE+ A DLH W FR
Sbjct: 120 RPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFR 179
Query: 85 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVL 144
HIYRG +RHLLT GW+ F + K+L GD ++F+R E +L +GIRRA Q NI SS++
Sbjct: 180 HIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIV 239
Query: 145 SSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRM 204
S +SM GI+ N F + Y PR+ S+F++ K+ V +++ + G RF M
Sbjct: 240 SIESMRHGIIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVV-NNKFNVGSRFTM 296
Query: 205 MFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVT 264
FE +D RR GTI GV+D P WK S+WR+L+V WDE + + ++VS W+IE +T
Sbjct: 297 RFEGDDFSERRSFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLT 355
Query: 265 APFFICPPPFFRSKRPRQ 282
+ F ++KR R+
Sbjct: 356 PWSNVSRSSFLKNKRSRE 373
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 926 FQRMRTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 984
F RT TKV +G +GR++D++ +GY++L +L + F ++GQL+ R + W++ + +
Sbjct: 506 FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQ--WEIAFTN 563
Query: 985 HEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQM 1018
+E D +LVG+DPW EF N V+ I I S +EV+ +
Sbjct: 564 NEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 221 bits (564), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/258 (44%), Positives = 157/258 (60%), Gaps = 4/258 (1%)
Query: 25 KPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFR 84
+P F K LTASD S +G FSVP++ A + PPLD S PAQEL A DLH W+FR
Sbjct: 125 RPLVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFR 184
Query: 85 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVL 144
H YRG P+RHLLTTGW+ F + K+L GD ++F+R E +L +GIRRA Q NI SS++
Sbjct: 185 HSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIV 244
Query: 145 SSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRM 204
S D M G++ N F + Y PR+ S+F++ K+ AV +++ + G RF M
Sbjct: 245 SIDCMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTM 301
Query: 205 MFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVT 264
FE +D RRY GTI GV++ P WK S WR+L+V WDE + + ++VS WEIE +
Sbjct: 302 RFEGDDLSERRYFGTIIGVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLM 360
Query: 265 APFFICPPPFFRSKRPRQ 282
+ F ++KR R+
Sbjct: 361 PALNVPRSSFLKNKRLRE 378
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 926 FQRMRTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 984
F RT TKV +G +GR++D++ +GY++L +L + F ++GQL+ R + WK+++
Sbjct: 512 FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQ--WKIIFTG 569
Query: 985 HEGDVLLVGDDPWEEFVNCVRCIKI 1009
+ D +LVGDDPW EF N V+ I I
Sbjct: 570 SDEDEMLVGDDPWPEFCNMVKRIYI 594
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 219 bits (558), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 111/258 (43%), Positives = 153/258 (59%), Gaps = 6/258 (2%)
Query: 25 KPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFR 84
+P F K LTASDTS +GGF VP++ A + PPL PAQEL A+DLH W FR
Sbjct: 120 RPLVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFR 175
Query: 85 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVL 144
H YRG P+RH LTTGW+ F + K+L GD ++F+R E +L +GIRRA Q NI SS++
Sbjct: 176 HSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIV 235
Query: 145 SSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRM 204
S D M G++ N F + Y P S+F++ K+ A+ +++ G RF M
Sbjct: 236 SIDCMRHGVIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTM 294
Query: 205 MFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVT 264
FE +D RRY GTI GVND P WK S+WR+L+V WDE + + ++VS WEIE +
Sbjct: 295 RFEGDDFSERRYFGTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLM 353
Query: 265 APFFICPPPFFRSKRPRQ 282
+ + ++KR R+
Sbjct: 354 SALNVPRSSLLKNKRLRE 371
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 926 FQRMRTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 984
F RT TKV +G +GR++D++ +GY++L +L + F ++GQL+ R + WK+ + D
Sbjct: 491 FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQ--WKIAFTD 548
Query: 985 HEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQ 1016
+G +LVGDDPW EF V+ I I S +EV+
Sbjct: 549 SDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/258 (44%), Positives = 154/258 (59%), Gaps = 4/258 (1%)
Query: 25 KPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFR 84
+P F K LTASDTS HGGF VP++ A + P LD S PAQEL A DLH W F
Sbjct: 120 RPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFN 179
Query: 85 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVL 144
H YRG P+RHLLTTGW+ F + K+L AGD ++F+R E +L +GIRRA Q NI SS++
Sbjct: 180 HNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIV 239
Query: 145 SSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRM 204
S D M G++ N FT+ Y PR+ S+F++ K+ AV +++ + G RF M
Sbjct: 240 SIDCMRHGVVASAKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAV-NNKFNVGSRFTM 296
Query: 205 MFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVT 264
E +D RR GTI GV+D P WK S+WR+L+V WDE T+ +VS W+IE +
Sbjct: 297 RLEGDDFSERRCFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLM 355
Query: 265 APFFICPPPFFRSKRPRQ 282
+ ++KR R+
Sbjct: 356 PAINVPRSFLLKNKRLRE 373
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 926 FQRMRTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 984
F RT TKV +G +GR++D++ +GY++L +L + F I+GQL+ R + W++ + D
Sbjct: 507 FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQ--WEIAFTD 564
Query: 985 HEGDVLLVGDDPWEEFVNCVRCIKI 1009
+ D +LVGDDPW EF N V+ I I
Sbjct: 565 SDEDKMLVGDDPWPEFCNMVKKIFI 589
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 157/258 (60%), Gaps = 6/258 (2%)
Query: 25 KPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFR 84
+P F K LTASDTS GGF VP++ A + PPLD S P QEL A DLH W F
Sbjct: 120 RPLVNSFTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFN 177
Query: 85 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVL 144
H YRG P+RHLLTTGW+ F + K+L AGD ++F+R E +L +GIRRA Q NI SS++
Sbjct: 178 HNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSII 237
Query: 145 SSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRM 204
S +SM G++ N F + Y PR+ S+F++ K+ AV +++ + G RF M
Sbjct: 238 SIESMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTM 294
Query: 205 MFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVT 264
FE +D RRY GTI GV+D P WK S+WRNL+V WDE + + ++VS WEIE +
Sbjct: 295 RFEGDDFSERRYFGTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLM 353
Query: 265 APFFICPPPFFRSKRPRQ 282
+ P ++KR R+
Sbjct: 354 PALNVPRPSLLKNKRLRE 371
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 926 FQRMRTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 984
F RT TKV +G + R++D++ +GY++L +L F ++GQL+ R + W++ + D
Sbjct: 505 FSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQ--WEIAFTD 562
Query: 985 HEGDVLLVGDDPWEEFVNCVRCIKIL 1010
+ D +LVGDDPW EF N V+ I I
Sbjct: 563 SDDDKMLVGDDPWPEFCNMVKKILIF 588
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 209 bits (532), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 162/330 (49%), Gaps = 50/330 (15%)
Query: 1 MTLQPVPSFDKDALLRSDLALKSSKP----------QPEFFCKQLTASDTSTHGGFSVPR 50
+TL P+P D D L +D L + P +P F K LT SD + GGFSVPR
Sbjct: 77 ITLLPLPGNDLD--LENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSDANNGGGFSVPR 134
Query: 51 RAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLF 110
AE IFP LD+S +PP Q + A+D+H W FRHIYRG P+RHLLTTGWS FV+ K+L
Sbjct: 135 YCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLI 194
Query: 111 AGDSVLFIRDEKQQLLLGIRRANR----------QPTNISSSVLSSDSMHIGILXXXXXX 160
AGDS++F+R E L +GIRRA R P S L D
Sbjct: 195 AGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDESTTTTSKLMMMK 254
Query: 161 XXNNS--------------------------PFTIFYNPRASPSEFVIPLAKYYKAVYSH 194
N+ F + Y PRAS EF + A A+
Sbjct: 255 RNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCVKAADVRSAMRIR 314
Query: 195 QISPGMRFRMMFETEDSG-TRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDESTAGEKRS 253
S GMRF+M FETEDS +MGT++ V DP+RW NS WR LQV WDE +
Sbjct: 315 WCS-GMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVK 373
Query: 254 RVSIWEIEPVTAPFFICPPPFFRSKRPRQP 283
RVS W +E V+ I PF K+ R P
Sbjct: 374 RVSPWLVELVSNMPTIHLSPFSPRKKIRIP 403
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 158/305 (51%), Gaps = 47/305 (15%)
Query: 31 FCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIYRGQ 90
F K LT SD + GGFSVPR AE IFP LD++ +PP Q + A+D+H W FRHIYRG
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGT 179
Query: 91 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------QPT 137
P+RHLLTTGWS FV+ K+L AGDS++F+R E L +GIRRA R P
Sbjct: 180 PRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPI 239
Query: 138 NIS---SSVLSSD-----------------SMHIGILXXXXXXXXNNSPFTIFYNPRASP 177
S SS+L D + + + PF + Y PRAS
Sbjct: 240 GGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRAST 299
Query: 178 SEFVIPLAKYYKAVYSHQISPGMRFRMMFETEDSG-TRRYMGTITGVNDLDPVRWKNSQW 236
SEF + A +A GMRF+M FETEDS +MGT++ VN DP+RW NS W
Sbjct: 300 SEFCVK-ALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPW 358
Query: 237 RNLQVGWDESTAGEKRSRVSIWEIEPVT----APFFICPPPFFRSKRPRQPGLHDDESSD 292
R LQV WDE + RV+ W +E V+ P PP + + P+ P D
Sbjct: 359 RLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHP--------D 410
Query: 293 FDNLF 297
++NL
Sbjct: 411 YNNLI 415
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 204 bits (519), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 152/254 (59%), Gaps = 6/254 (2%)
Query: 10 DKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQ 69
D ++ + + + +P FF K LTASD S GG +P++ A + FPPLD S Q
Sbjct: 103 DTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQ 162
Query: 70 ELTARDLHDTPWTFRHIYRGQPKRHLLTT--GWSLFVSGKRLFAGDSVLFIRDEKQQLLL 127
L A+DL+ W+F+H++RG P+RH+ T+ GWS+F + KRL GD + +R E +L
Sbjct: 163 NLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRF 222
Query: 128 GIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKY 187
GIRRA Q +I SSV+S++ M G++ F + Y P S S+FVI K+
Sbjct: 223 GIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKP--SSSQFVISYDKF 280
Query: 188 YKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDEST 247
A+ ++ I G RFRM FE +D +RY GTI GVND+ P WK+S+WR+L+V WDE +
Sbjct: 281 VDAMNNNYIV-GSRFRMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELS 338
Query: 248 AGEKRSRVSIWEIE 261
+ ++VS W+IE
Sbjct: 339 PFLRPNQVSPWDIE 352
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 179 bits (455), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 136/254 (53%), Gaps = 32/254 (12%)
Query: 10 DKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQ 69
D ++ + + + +P FF K LTASD S GG +P++ A + FPPLD S Q
Sbjct: 103 DTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQ 162
Query: 70 ELTARDLHDTPWTFRHIYRGQPKRHLLTT--GWSLFVSGKRLFAGDSVLFIRDEKQQLLL 127
L A+DL+ W+F+H++RG P+RH+ T+ GWS+F + KRL GD + +R E +L
Sbjct: 163 NLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRF 222
Query: 128 GIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKY 187
GIRRA Q +I SSV+S++ M G++ F + Y P
Sbjct: 223 GIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKP-------------- 268
Query: 188 YKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDEST 247
RM FE +D +RY GTI GVND+ P WK+S+WR+L+V WDE +
Sbjct: 269 ---------------RMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELS 312
Query: 248 AGEKRSRVSIWEIE 261
+ ++VS W+IE
Sbjct: 313 PFLRPNQVSPWDIE 326
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 179 bits (454), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 136/254 (53%), Gaps = 32/254 (12%)
Query: 10 DKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQ 69
D ++ + + + +P FF K LTASD S GG +P++ A + FPPLD S Q
Sbjct: 103 DTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQ 162
Query: 70 ELTARDLHDTPWTFRHIYRGQPKRHLLTT--GWSLFVSGKRLFAGDSVLFIRDEKQQLLL 127
L A+DL+ W+F+H++RG P+RH+ T+ GWS+F + KRL GD + +R E +L
Sbjct: 163 NLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRF 222
Query: 128 GIRRANRQPTNISSSVLSSDSMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFVIPLAKY 187
GIRRA Q +I SSV+S++ M G++ F + Y P
Sbjct: 223 GIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKP-------------- 268
Query: 188 YKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQVGWDEST 247
RM FE +D +RY GTI GVND+ P WK+S+WR+L+V WDE +
Sbjct: 269 ---------------RMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELS 312
Query: 248 AGEKRSRVSIWEIE 261
+ ++VS W+IE
Sbjct: 313 PFLRPNQVSPWDIE 326
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 933 TKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLL 991
TKV+ +G A+ R++D+ GY +L Q L F ++ +L R R W++V+ ++EG +L
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDEL--RTRNQWEIVFTNNEGAEML 493
Query: 992 VGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDF 1024
VGDDPW EF N + I I S +E+++M L F
Sbjct: 494 VGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 526
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 166 bits (420), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 139/289 (48%), Gaps = 41/289 (14%)
Query: 31 FCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIYRGQ 90
F K LT SD + GGFSVPR A+ +FP L+F + PP Q+L D+H W FRHIYRG
Sbjct: 119 FAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGT 178
Query: 91 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNIS---------- 140
P+RHLLTTGWS FV+ K+L AGDSV+F+R ++ +G+RR ++
Sbjct: 179 PRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYN 238
Query: 141 -----SSVLSSD--------------SMHIGILXXXXXXXXNNSPFTIFYNPRASPSEFV 181
SSV D + + PF + + P A SEFV
Sbjct: 239 GYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFV 298
Query: 182 IPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGVNDLDPVRWKNSQWRNLQV 241
+ A+ ++ S +PG R +M ETEDS + I + W+ S W+ LQ+
Sbjct: 299 V-RAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQI 357
Query: 242 GWDESTAGEKRSRVSIWEIEPVT------APFFICPPPFFRSKRPRQPG 284
WDE + RV+ W++E PF PP R K P QPG
Sbjct: 358 TWDEPEILQNVKRVNPWQVEIAAHATQLHTPF----PPAKRLKYP-QPG 401
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 25 KPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFR 84
+P F K LTASDTS G FSVP + A + PPLD S PAQEL A DLH W F+
Sbjct: 120 RPIVNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFK 179
Query: 85 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIR 130
H YR P+ TTGW+ F + K+L GD ++F R E +L +GIR
Sbjct: 180 HSYR-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 61.6 bits (148), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 932 YTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVL 990
+ KVY G +GR +D+ +SGYE L ++L+ F +R R L Y D +GD +
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWM 133
Query: 991 LVGDDPWEEFVNCVRCIKILSPQ 1013
+VGD PW+ F+ VR +KI P+
Sbjct: 134 MVGDIPWDMFLETVRRLKITRPE 156
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 21 LKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTP 80
SS+ + F K LT SD +P++ AE FP D Q T D D
Sbjct: 26 FYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLED------NQNGTVLDFQDKN 79
Query: 81 ---WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR 119
W FR+ Y + +++T GWS FV K+LFAGD+V F R
Sbjct: 80 GKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYR 121
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 30 FFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIYRG 89
F K +T SD +P+ AEK FP ++ L D++ W FR+ Y
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWN 246
Query: 90 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD--EKQQLLLGIR 130
+ ++LT GWS FV K L AGD V F R + QQL +G +
Sbjct: 247 SSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWK 289
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 15 LRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFP-PL-DFSMQPPAQELT 72
L S + + K F K +T SD +P+ AEK FP PL + ++ L
Sbjct: 167 LASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLN 226
Query: 73 ARDLHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR--DEKQQLLLG 128
D++ W FR+ Y + ++LT GWS FV KRL AGD + F R D+ Q+ +G
Sbjct: 227 FEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIG 284
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 23 SSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE---LTARDLHDT 79
SS + F K +T SD +P++ AE+ FP LD S + + L D
Sbjct: 15 SSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGN 73
Query: 80 PWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDE--KQQLLLGIRRANRQP 136
W FR+ Y + +++T GWS FV K+L AGD V F RD K +L + RR + P
Sbjct: 74 SWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRRPKIP 132
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 31 FCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE---LTARDLHDTPWTFRHIY 87
F K LT SD +P++ AE+ FP L + ++ L D PW FR+ Y
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 88 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQ--QLLLGIRR 131
+ ++LT GWS +V K L AGD VLF R + +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 26 PQPE---FFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWT 82
P PE F K +T SD +P++ AE+ FP LD S L +D + W
Sbjct: 48 PPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWR 106
Query: 83 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLF---IRDEKQQLLLGI 129
FR+ Y + +++T GWS FV K+L AGD V F I DE ++ L I
Sbjct: 107 FRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYI 156
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 31 FCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTARDLHDTPWTFRHIYRGQ 90
F K +T SD +P++ AE+ FP LD S L DL W FR+ Y
Sbjct: 35 FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 93
Query: 91 PKRHLLTTGWSLFVSGKRLFAGDSVLFIR-----DEKQQLLLGIRRANRQP 136
+ +++T GWS FV K+L AGD V F R +L + RR + P
Sbjct: 94 SQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPKVP 144
>AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3649165-3651271 REVERSE LENGTH=267
Length = 267
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 30 FFCKQLTASDTSTHGGFSVPRRAAEKIFPPL----------DFSMQPPAQELTARDLHDT 79
F K LT SD +P++ AEK FP D + L+ D
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGK 87
Query: 80 PWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD--EKQQLLLGIRR 131
W FR+ Y + ++LT GWS +V K L AGD V F R + +L +G RR
Sbjct: 88 CWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3650579-3651271 REVERSE LENGTH=230
Length = 230
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 31 FCKQLTASDTSTHGGFSVPRRAAEKIFPPL----------DFSMQPPAQELTARDLHDTP 80
F K LT SD +P++ AEK FP D + L+ D
Sbjct: 29 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKC 88
Query: 81 WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD--EKQQLLLGIRR 131
W FR+ Y + ++LT GWS +V K L AGD V F R + +L +G RR
Sbjct: 89 WKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 30 FFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE---LTARDLHDTPWTFRHI 86
F K LT SD +P++ AE+ FP L + ++ L D PW FR+
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEEGKPWRFRYS 95
Query: 87 YRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQ--QLLLGIRR 131
Y + ++LT GWS +V K L AGD VLF R + +G RR
Sbjct: 96 YWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=282
Length = 282
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 27 QPEFFCKQLTASDTSTHGGFSVPRRAAEKIFP---------PLDFSMQPPAQELTARDLH 77
+ F K LT SD +P++ AEK FP D S L+ D
Sbjct: 42 KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101
Query: 78 DTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLF--IRDEKQQLLLGIRRANRQ 135
W FR+ Y + ++LT GWS FV K+L GD V F R + ++L +G RR +
Sbjct: 102 GKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQG 161
Query: 136 PTNISSSVLSSDS 148
SSSV +++S
Sbjct: 162 S---SSSVAATNS 171
>AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=267
Length = 267
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 27 QPEFFCKQLTASDTSTHGGFSVPRRAAEKIFP---------PLDFSMQPPAQELTARDLH 77
+ F K LT SD +P++ AEK FP D S L+ D
Sbjct: 42 KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101
Query: 78 DTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLF--IRDEKQQLLLGIRRANRQ 135
W FR+ Y + ++LT GWS FV K+L GD V F R + ++L +G RR +
Sbjct: 102 GKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQG 161
Query: 136 PTNISSSVLSSDS 148
SSSV +++S
Sbjct: 162 S---SSSVAATNS 171
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 932 YTKVYKRG-AVGRSIDIARYSGYEELKQDLARRF--------GIEGQLEDRQRI-----G 977
+ KV G A+GR +D+ +S YE L Q L F G+ Q R+
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 978 WKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1019
+ L Y D EGD +LVGD PW F+N V+ ++++ E ++
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 932 YTKVYKRG-AVGRSIDIARYSGYEELKQDLARRF--------GIEGQLEDRQRI-----G 977
+ KV G A+GR +D+ +S YE L Q L F G+ Q R+
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 978 WKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1019
+ L Y D EGD +LVGD PW F+N V+ ++++ E ++
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 932 YTKVYKRG-AVGRSIDIARYSGYEELKQDLARRF--------GIEGQLEDRQRI-----G 977
+ KV G A+GR +D+ +S YE L Q L F G+ Q R+
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 978 WKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1019
+ L Y D EGD +LVGD PW F+N V+ ++++ E ++
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor
family protein | chr1:8981891-8982976 REVERSE LENGTH=361
Length = 361
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 8 SFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFP----PLDFS 63
++ DA+LR+ L F K +T SD +P++ AEK FP
Sbjct: 181 TYGNDAVLRAREVL---------FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMG 231
Query: 64 MQPPAQELTARDLHDTP---WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR 119
M P + +L D W FR+ Y + ++LT GWS FV K L AGD V F R
Sbjct: 232 MNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFER 290
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 932 YTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLE-DRQRIGWKLVYVDHEGDV 989
Y K+ G +GR ++++ Y+ Y++L + + F + + +RQ + LVY D EGD
Sbjct: 82 YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQ---YTLVYEDTEGDK 138
Query: 990 LLVGDDPWEEFVNCVRCIKIL 1010
+LVGD PWE FV+ V+ + +L
Sbjct: 139 VLVGDVPWEMFVSTVKRLHVL 159
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 22 KSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTA------RD 75
K K + F K +T SD +P++ AEK FP + P+ +T D
Sbjct: 179 KVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-----LPSPSPAVTKGVLINFED 233
Query: 76 LHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR 119
++ W FR+ Y + ++LT GWS FV K L AGD V F R
Sbjct: 234 VNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 22 KSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELTA------RD 75
K K + F K +T SD +P++ AEK FP + P+ +T D
Sbjct: 179 KVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-----LPSPSPAVTKGVLINFED 233
Query: 76 LHDTPWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIR 119
++ W FR+ Y + ++LT GWS FV K L AGD V F R
Sbjct: 234 VNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regulator
family protein | chr1:1240582-1241810 FORWARD LENGTH=239
Length = 239
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 932 YTKVYKRG-AVGRSIDIARYSGYEELKQDLARRF-GIEGQLEDRQRIG----------WK 979
+ KV G +GR +D+ +S YE L Q L F G+ G R+++ +
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTT-CREKVKPLRLLDGSSDFV 184
Query: 980 LVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1019
L Y D EGD +LVGD PW F+N V+ ++I+ E ++
Sbjct: 185 LTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLA 224
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein 1
| chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 932 YTKVYKRGA-VGRSIDIARYSGYEELKQDLARRF-GI--------EGQLEDRQRIG---- 977
+ K+ G +GR +D+ Y+ YE+L + + F G+ +GQ E++ IG
Sbjct: 153 FVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDG 212
Query: 978 ---WKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEV 1015
+ L Y D+EGD +LVGD PW+ FV+ V+ ++++ E+
Sbjct: 213 KGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 16/91 (17%)
Query: 941 VGRSIDIARYSGYEEL--------KQDLARRFGIEGQLEDRQRIG--------WKLVYVD 984
+GR +D++ ++ YE+L + LA + +ED + I + L Y D
Sbjct: 161 IGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNGEYTLTYED 220
Query: 985 HEGDVLLVGDDPWEEFVNCVRCIKILSPQEV 1015
+EGD +LVGD PW+ FV+ V+ ++++ E+
Sbjct: 221 NEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206 FORWARD
LENGTH=186
Length = 186
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 932 YTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIE-GQLEDRQRIGWK-----LVYVD 984
Y KV GA R ID+ Y Y EL + L F G+ +R+ G+K Y D
Sbjct: 90 YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFERE--GYKGSDFVPTYED 147
Query: 985 HEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGL 1029
+GD +LVGD PWE FV+ + ++I+ EV+ + G GGL
Sbjct: 148 KDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL------GCGGL 186
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 932 YTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGI-------EGQLEDRQRIGWKLVYV 983
Y KV G +GR ID+ +GY +L + L F E ++ + L Y
Sbjct: 86 YVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHV---LTYA 142
Query: 984 DHEGDVLLVGDDPWEEFVNCVRCIKI 1009
D EGD ++VGD PWE F++ VR +KI
Sbjct: 143 DKEGDWMMVGDVPWEMFLSTVRRLKI 168