Miyakogusa Predicted Gene

Lj2g3v0911700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0911700.1 Non Chatacterized Hit- tr|B9RGV5|B9RGV5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,42.31,0.000000005,Q5NBQ1_ORYSA_Q5NBQ1;,Phosphoribosyl-AMP
cyclohydrolase domain; histidine_hisI: phosphoribosyl-ATP
di,CUFF.35691.1
         (284 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G31860.1 | Symbols: AT-IE, HISN2 | histidine biosynthesis bif...   383   e-107

>AT1G31860.1 | Symbols: AT-IE, HISN2 | histidine biosynthesis
           bifunctional protein (HISIE) | chr1:11434250-11436530
           REVERSE LENGTH=281
          Length = 281

 Score =  383 bits (983), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/283 (68%), Positives = 223/283 (78%), Gaps = 11/283 (3%)

Query: 1   MAVSYVHMLQS-ARG--FHKCNLSFSSHEYPRRSYKTHHLVFASMHTSN----PKVDSFL 53
           MAVSY  + QS AR   F     SF   +   RS    ++VFA     N     KVD+ L
Sbjct: 1   MAVSYNALAQSLARSSCFIPKPYSFRDTKLRSRS----NVVFACNDNKNIALQAKVDNLL 56

Query: 54  DSLKWDDKGLAVAIAQNVDTGAILMQGFANREAVVTTISSRKATFYSRSRSALWTKGETS 113
           D +KWDDKGLAVAIAQNVDTGA+LMQGF NREA+ TTISSRKATF+SRSRS LWTKGETS
Sbjct: 57  DRIKWDDKGLAVAIAQNVDTGAVLMQGFVNREALSTTISSRKATFFSRSRSTLWTKGETS 116

Query: 114 NNFINVHDVFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDLLKEQVADGNKLALTSL 173
           NNFIN+ DV++DCDRDSIIYLG PDGPTCHTG ETCYYTSVFD L    A GNKLALT+L
Sbjct: 117 NNFINILDVYVDCDRDSIIYLGTPDGPTCHTGEETCYYTSVFDQLNNDEASGNKLALTTL 176

Query: 174 YDLESTISQRKAELAEVENGKPSWTKRLLLNDELLCSKIREEANELCQTLESNEDKSRTA 233
           Y LES IS+RK E    + GKPSWT+RLL +D LLCSKIREEA+ELC+TLE NE+ SRT 
Sbjct: 177 YSLESIISKRKEESTVPQEGKPSWTRRLLTDDALLCSKIREEADELCRTLEDNEEVSRTP 236

Query: 234 SEMADVLYHAMVLMARKDVKMEDVLQVLRQRFSQSGIEEKRSR 276
           SEMADVLYHAMVL++++ VKMEDVL+VLR+RFSQSGIEEK++R
Sbjct: 237 SEMADVLYHAMVLLSKRGVKMEDVLEVLRKRFSQSGIEEKQNR 279