Miyakogusa Predicted Gene

Lj2g3v0911690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0911690.1 Non Chatacterized Hit- tr|B9RKA3|B9RKA3_RICCO
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine
O,66.67,0,Trimeric LpxA-like enzymes,Trimeric LpxA-like; SERINE ACETYL
TRANSFERASE,NULL; SIALIC ACID SYNTHASE-,CUFF.35642.1
         (344 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29540.2 | Symbols:  | bacterial transferase hexapeptide repe...   438   e-123
AT4G29540.1 | Symbols:  | bacterial transferase hexapeptide repe...   430   e-121
AT4G05210.1 | Symbols:  | Trimeric LpxA-like enzymes superfamily...    55   6e-08

>AT4G29540.2 | Symbols:  | bacterial transferase hexapeptide
           repeat-containing protein | chr4:14497775-14499765
           FORWARD LENGTH=336
          Length = 336

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/292 (71%), Positives = 239/292 (81%)

Query: 45  FIHPSAVVHPNAVIGEGVSIGPFCSVSSYAKLGNGCQLYPGSHIFGSTELGDNCMLMTGA 104
            IHPSAVVHPNAVIG+GVS+GP+C++ S  KLGNGC+LYP SH+FG+TELG++C+LMTGA
Sbjct: 40  LIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGA 99

Query: 105 IVGDDYPGCTIIGSNNIIGYHAVVGVKCQDLKYKPEDECFLEVGHNNDIREHTSIHRSSK 164
           +VGD+ PG T IG NNIIG+HAVVGVKCQDLKYK  DECFL +G+NN+IRE  SIHRSSK
Sbjct: 100 VVGDELPGYTFIGCNNIIGHHAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIHRSSK 159

Query: 165 STDRTVIGDENLIMGSCHIAHDCKIGNSNIFANNTLLAGHVEVEDCVHTAGATVVHQFCH 224
            +D+TVIGD NLIMGSCHIAHDCKIG+ NIFANNTLLAGHV VED  HTAGA+VVHQFCH
Sbjct: 160 PSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGHVVVEDNTHTAGASVVHQFCH 219

Query: 225 XXXXXXXXXXXXXXQDVPKYMMVSGERAELRGLNLVGLTRRGFSIEEIRSLRAAYRKIFM 284
                         QDVPKYMMV+GERAELRGLNL GL R GF++ E++SLRAAYRKIFM
Sbjct: 220 IGSFAFIGGGSVVSQDVPKYMMVAGERAELRGLNLEGLRRNGFTMSEMKSLRAAYRKIFM 279

Query: 285 CVDASVGSFEERLAQVEQDNKLIHVPAVRAMLQSIHDSFAEDRRGICRFRVW 336
             +    SFEERL ++EQD +L  VPAV AMLQSI DSF E RRGIC+FR W
Sbjct: 280 STETVSLSFEERLTELEQDQELYSVPAVSAMLQSIRDSFTESRRGICKFRQW 331


>AT4G29540.1 | Symbols:  | bacterial transferase hexapeptide
           repeat-containing protein | chr4:14497775-14499765
           FORWARD LENGTH=334
          Length = 334

 Score =  430 bits (1105), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/292 (70%), Positives = 238/292 (81%), Gaps = 2/292 (0%)

Query: 45  FIHPSAVVHPNAVIGEGVSIGPFCSVSSYAKLGNGCQLYPGSHIFGSTELGDNCMLMTGA 104
            IHPSAVVHPNAVIG+GVS+GP+C++ S  KLGNGC+LYP SH+FG+TELG++C+LMTGA
Sbjct: 40  LIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGA 99

Query: 105 IVGDDYPGCTIIGSNNIIGYHAVVGVKCQDLKYKPEDECFLEVGHNNDIREHTSIHRSSK 164
           +VGD+ PG T IG NNIIG+HAVVGVKCQDLKYK  DECFL +G+NN+IRE  SIHRSSK
Sbjct: 100 VVGDELPGYTFIGCNNIIGHHAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIHRSSK 159

Query: 165 STDRTVIGDENLIMGSCHIAHDCKIGNSNIFANNTLLAGHVEVEDCVHTAGATVVHQFCH 224
            +D+TVIGD NLIMGSCHIAHDCKIG+ NIFANNTLLAGHV VED  HTAGA+VVHQFCH
Sbjct: 160 PSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGHVVVEDNTHTAGASVVHQFCH 219

Query: 225 XXXXXXXXXXXXXXQDVPKYMMVSGERAELRGLNLVGLTRRGFSIEEIRSLRAAYRKIFM 284
                         QDVPKYMMV+GERAELRGLNL GL R GF++ E++SLRAAYRKIFM
Sbjct: 220 IGSFAFIGGGSVVSQDVPKYMMVAGERAELRGLNLEGLRRNGFTMSEMKSLRAAYRKIFM 279

Query: 285 CVDASVGSFEERLAQVEQDNKLIHVPAVRAMLQSIHDSFAEDRRGICRFRVW 336
             +    SFEERL +++Q+  L  VPAV AMLQSI DSF E RRGIC+FR W
Sbjct: 280 STETVSLSFEERLTELDQE--LYSVPAVSAMLQSIRDSFTESRRGICKFRQW 329


>AT4G05210.1 | Symbols:  | Trimeric LpxA-like enzymes superfamily
           protein | chr4:2682867-2684867 FORWARD LENGTH=330
          Length = 330

 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 25/197 (12%)

Query: 25  FFSYVAEGESVHASDATKPS-FIHPSAVVHPNAVIGEGVSIGPFCSVSSYAKLGNGCQLY 83
           F  +   G   H S     S  +   AVVH  A++G  V IG    + S  K+G      
Sbjct: 80  FLRWRNGGGMYHRSALIDSSALVEFGAVVHQEAILGAEVHIGSNTVIGSSVKIG------ 133

Query: 84  PGSHIFGSTELGDNCMLMTGAIVGDDYPGCTIIGSNNIIGYHAVVGVKCQDLKYKPEDEC 143
           P + I G+  +GD C++  G  +G D  G  +  + N++     + VK            
Sbjct: 134 PSTKI-GNCSIGDLCVIHNGVCIGQDGFGFYVDDNGNMVKKPQTLNVK------------ 180

Query: 144 FLEVGHNNDIREHTSIHRSSKSTDRTVIGDENLIMGSCHIAHDCKIGNSNIFANNTLLAG 203
              +G+  +I  +T I R S     TVIGD+  I     I H+  IG   +F     +AG
Sbjct: 181 ---IGNRVEIGANTCIDRGSWRD--TVIGDDTKIDNLVQIGHNVIIGKCCLFCGQVGIAG 235

Query: 204 HVEVEDCVHTAGATVVH 220
             E+ D V   G   V 
Sbjct: 236 SAEIGDFVALGGRVAVR 252