Miyakogusa Predicted Gene
- Lj2g3v0911660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0911660.1 tr|A9RJW2|A9RJW2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_175641,26.14,1e-18,PPR,Pentatricopeptide repeat;
DYW_deaminase,NULL; PPR_3,Pentatricopeptide repeat; SUBFAMILY NOT
NAME,CUFF.35637.1
(470 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 415 e-116
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 7e-84
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 5e-78
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 8e-78
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 267 9e-72
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 266 2e-71
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 1e-70
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 1e-70
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 6e-70
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 258 5e-69
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 5e-68
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 7e-68
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 7e-68
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 9e-67
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 250 2e-66
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 250 2e-66
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 249 3e-66
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 246 3e-65
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 4e-65
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 7e-65
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 242 3e-64
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 4e-64
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 4e-64
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 239 3e-63
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 239 4e-63
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 239 4e-63
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 239 4e-63
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 9e-62
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 233 3e-61
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 6e-61
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 6e-60
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 6e-60
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 7e-59
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 224 1e-58
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 3e-58
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 6e-57
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 8e-57
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 217 1e-56
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 7e-56
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 212 6e-55
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 6e-55
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 207 9e-54
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 202 3e-52
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 1e-51
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 200 2e-51
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 198 7e-51
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 7e-49
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 190 2e-48
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 7e-47
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 4e-42
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 7e-36
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 5e-35
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 8e-30
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 6e-29
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 8e-29
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 2e-28
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 9e-27
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 9e-27
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 118 1e-26
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 117 2e-26
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 116 3e-26
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 7e-26
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 112 6e-25
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 109 3e-24
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 108 6e-24
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 9e-24
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 108 1e-23
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 107 1e-23
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 5e-23
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 102 4e-22
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 8e-22
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 1e-20
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 93 3e-19
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 83 5e-16
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 80 2e-15
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 6e-09
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 59 1e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 58 2e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 56 5e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 7e-07
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 52 1e-06
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 51 1e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 50 4e-06
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 49 9e-06
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/387 (51%), Positives = 263/387 (67%), Gaps = 6/387 (1%)
Query: 85 NQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKR 144
NQ A S ++M LC+ A+EL+ GA+ D ++ L + C + SLE K+
Sbjct: 198 NQMNEVAPPPSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKK 257
Query: 145 VHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGR 204
VH+ +S F G+ ++NN +I M+G+C + DA+RVFD M ++++ SW LM+ Y+ NG
Sbjct: 258 VHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGM 317
Query: 205 GDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYL 263
GDD L +F++M + G++P+ ETF F+HF+SMK E+GI+P EHYL
Sbjct: 318 GDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYL 377
Query: 264 EVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPS 323
V+ +LG G L EAE+++ +P E D W+A+RN+AR+HGDIDLED EEL++ DPS
Sbjct: 378 GVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPS 437
Query: 324 KASADKLPTPPRKKQSAINMLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLREAGYVPDT 383
KA +K+PTPP K NM+ K+R+ E+R YK+E E + G + YVPDT
Sbjct: 438 KAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAKE-MAAKKGVV----YVPDT 492
Query: 384 RYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKI 443
R+VLHDID+E KE+AL YHSERLAIAYG+I TPPR TL IIKNLR+CGDCHN IKIMSKI
Sbjct: 493 RFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKI 552
Query: 444 VGRELIVRDNKRFHHFKDGKCSCGDYW 470
+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 553 IGRVLIVRDNKRFHHFKDGKCSCGDYW 579
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 308 bits (788), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 167/403 (41%), Positives = 233/403 (57%), Gaps = 19/403 (4%)
Query: 83 HQNQDTPFAASSSNADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGS 138
H QD + SS +L S+C EGK+ +A+E++ G V D + +LC D+ +
Sbjct: 139 HFQQD--HSGHSSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQA 196
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISG 198
L+ K VHEF+ S ++ N +I MY CG ++DA VF+ MPERNL +WC +I
Sbjct: 197 LQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRC 256
Query: 199 YTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAP 257
+ NG+G+D + F + KQ G +PDGE F G +HFESM KEYGI P
Sbjct: 257 FAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIP 316
Query: 258 CREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELL 317
C EHY+ ++ +L G L+EA FVE M E VD+W+ L N +R+HGD+ L DR ++++
Sbjct: 317 CMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMV 374
Query: 318 IGFDPSKASAD-KLPTPPRK-----KQSAINMLEEKNRVAEYRC----SIPYKEEVNEKL 367
D S+ + + K P K K+ M + N Y S P E+ L
Sbjct: 375 EQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMAL 434
Query: 368 KGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNL 427
K L + E GYVP ++ LHD+D+E K++ L H+ER A + TP R+ +R++KNL
Sbjct: 435 KSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNL 494
Query: 428 RICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
R+C DCHNA+K+MSKIVGRELI RD KRFHH KDG CSC +YW
Sbjct: 495 RVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 150/367 (40%), Positives = 206/367 (56%), Gaps = 25/367 (6%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
+L C G+L GK VH+ ++ + F + V+ LIGMY KCG + +ARR+FD M ++N
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFE 248
+W MISGY ++G+G + L +F +M +G+ P TF G F
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 249 SM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDI 307
SM YG P +HY +++ILG AG L A +F+E M +E G +W+ L RIH D
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 605
Query: 308 DLEDRAEELLIGFDPSKA----------SADK-LPTPPRKKQSA-------------INM 343
+L E L DP SAD+ P +Q+A I +
Sbjct: 606 NLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
Query: 344 LEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHS 403
E + S P +E+ EKL+ L G++REAGY P+T LHD++EEE+E ++ HS
Sbjct: 666 GETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHS 725
Query: 404 ERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGK 463
ERLAIA+GLI+T P T +RIIKNLR+C DCH K++SKI R ++VRD RFHHFKDG
Sbjct: 726 ERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGV 785
Query: 464 CSCGDYW 470
CSCGDYW
Sbjct: 786 CSCGDYW 792
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
ELM GA SS ++L+ + SG L +H + KS+F V+ L +Y K
Sbjct: 312 ELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLN 368
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
++ AR++FD+ PE++L SW MISGYT NG +D + +F++M+++ P+ T
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 141 SGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYT 200
+G+ +H + E+ + + ++ MY K ++DAR+VFD+MPE++ W MISGY
Sbjct: 137 AGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYR 196
Query: 201 VNGRGDDGLLVFQQM 215
N + + VF+ +
Sbjct: 197 KNEMYVESIQVFRDL 211
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 287 bits (735), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 152/389 (39%), Positives = 226/389 (58%), Gaps = 20/389 (5%)
Query: 101 SLCEEGKLNQALE----LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNG 156
+ C+ GK+ +AL L V D S L L K+C ++ L+ K VH + S +
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 157 EVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMK 216
++ N+ L+ MY CG +A VF+KM E+NL +WC++I + NG G+D + +F + K
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 217 QAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQL 275
+ G PDG+ F G +HFESM ++YGIAP E Y+ ++ + G L
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 276 NEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSK----------- 324
+EA EFVE+MP+E VD+W+ L N +R+HG+++L D E++ DP++
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIP 467
Query: 325 ASADKLPTPPRKKQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVP 381
A + KK+S I + K+ + E+R ++P +E+ + L+ L + E GYV
Sbjct: 468 VKASDVEKESLKKRSGI-LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVA 526
Query: 382 DTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMS 441
+TR LHDID+E KE L HSER+A A ++++ PR +IKNLR+C DCHNA+KIMS
Sbjct: 527 ETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMS 586
Query: 442 KIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
IVGRE+I RD KRFH K+G C+C DYW
Sbjct: 587 DIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 267 bits (683), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 211/375 (56%), Gaps = 25/375 (6%)
Query: 121 ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
A+ ++++L C +G+L G ++H L K+ +V V L MYGKCG ++DA +
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 508
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXX 240
F ++P N W +I+ + +G G+ +++F++M GV+PD TF
Sbjct: 509 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 568
Query: 241 XXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRN 299
G FE M+ +YGI P +HY ++++ G AGQL A +F++ M L+ IW AL +
Sbjct: 569 DEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 628
Query: 300 FARIHGDIDLEDRAEELLIGFDPSK-----------ASADKLPTPPR----------KKQ 338
R+HG++DL A E L +P ASA K +K
Sbjct: 629 ACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKT 688
Query: 339 SAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEK 395
+ +E N+V + + P EE+ +L L +L+ GYVPD R+VL D++++EK
Sbjct: 689 PGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEK 748
Query: 396 EKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 455
E L HSERLAIA+ LI+TP +TT+RI KNLR+CGDCH+ K +SKI RE+IVRD+ R
Sbjct: 749 EHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNR 808
Query: 456 FHHFKDGKCSCGDYW 470
FHHFK+G CSCGDYW
Sbjct: 809 FHHFKNGVCSCGDYW 823
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSS 153
S NA + C+ G +AL L DS ++LL C ++G G +H + K
Sbjct: 218 SWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 154 FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQ 213
E+ V+N+LI +Y + G ++D ++VFD+M R+L SW +I Y +N + + +FQ
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 214 QMKQAGVEPDGETF 227
+M+ + ++PD T
Sbjct: 338 EMRLSRIQPDCLTL 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 111 ALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGK 170
+L ++ G D + ++LK C ++ G ++H K F +V V LI +Y +
Sbjct: 141 SLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR 197
Query: 171 CGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+ +AR +FD+MP R++ SW MISGY +G + L
Sbjct: 198 YKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEF-LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
D ++L + G + + + V F L+K F ++ + N ++ MY K G + AR V
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
F+ +P ++ SW +ISGY NG + + ++ M++ G
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
L + C + L+S K +H L S V ++ +L+ +Y G + AR FD + R
Sbjct: 59 TLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQ-MKQAGVEPDGETF 227
++ +W LMISGY G + + F M +G+ PD TF
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTF 156
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 223/410 (54%), Gaps = 37/410 (9%)
Query: 94 SSNADLMSLCEEGKLNQALELMGH--------GAVADSSVYLALLKLCEDSGSLESGKRV 145
S N+ + + G+ N+AL L GAVA SSV A C +L GK++
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPA----CAHLATLHLGKQL 365
Query: 146 HEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRG 205
H ++ + F + + + L+ MY KCG +K AR++FD+M + SW +I G+ ++G G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 206 DDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLE 264
+ + +F++MK+ GV+P+ F + +F SM K YG+ EHY
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 265 VINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSK 324
V ++LG AG+L EA F+ KM +E +W L + +H +++L ++ E + D
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 325 ASA-----------------DKLPTPPRKK----QSAINMLEEKNRVAEYRC---SIPYK 360
A KL RKK + A + +E KN+ + S P
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605
Query: 361 EEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTT 420
+++NE LK + Q+ + GYV DT VLHD+DEE K + L HSERLA+A+G+I+T P TT
Sbjct: 606 DKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT 665
Query: 421 LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
+R+ KN+RIC DCH AIK +SKI RE+IVRDN RFHHF G CSCGDYW
Sbjct: 666 IRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
DS ++L + + + GK +H ++ + + +V + + L+ MY K ++D+ RVF
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
++ R+ SW +++GY NGR ++ L +F+QM A V+P F
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAF 346
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 209/375 (55%), Gaps = 26/375 (6%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D +A L C G+LE+G+ +H F+K S V+V LI MY KCG +++A VF
Sbjct: 258 DEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVF 317
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ-AGVEPDGETFXXXXXXXXXXXXX 240
+ P +++ +W MI+GY ++G D L +F +M+ G++P TF
Sbjct: 318 NDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLV 377
Query: 241 XXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRN 299
G FESM +EYGI P EHY ++++LG AGQL A E ++ M ++ +W ++
Sbjct: 378 NEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLG 437
Query: 300 FARIHGDIDLEDRAEELLIGFDPSKASADKLPTPPRK---------------------KQ 338
++HGD L E LIG + + L + K+
Sbjct: 438 SCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKE 497
Query: 339 SAINMLEEKNRVAEYRCSI---PYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEK 395
I+ +E +N+V E+R +E+ L+ +S +++ GYVP+T VL D++E EK
Sbjct: 498 PGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEK 557
Query: 396 EKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 455
E++LQ HSERLAIAYGLIST P + L+I KNLR+C DCH K++SKI GR++++RD R
Sbjct: 558 EQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNR 617
Query: 456 FHHFKDGKCSCGDYW 470
FHHF DG CSCGD+W
Sbjct: 618 FHHFTDGSCSCGDFW 632
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 104 EEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNR 163
+ GKL ++ G D V L+ + G + S ++V + + + S +
Sbjct: 143 KSGKLIHT-HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVS----STA 197
Query: 164 LIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
+I Y K G ++ AR +FD M ER++ SW +MI GY +G +D L++FQ++ G
Sbjct: 198 MITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEG 253
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 227/403 (56%), Gaps = 28/403 (6%)
Query: 96 NADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
NA + + G +A+ E++ D+ + + C GSLE + ++E++ +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
S + +V +++ LI M+ KCG ++ AR VFD+ +R++ W MI GY ++GR + + +
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 212 FQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGN 271
++ M++ GV P+ TF G+ F M ++ I P ++HY VI++LG
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGR 471
Query: 272 AGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKA------ 325
AG L++A E ++ MP++ GV +W AL + + H ++L + A + L DPS
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQL 531
Query: 326 ----SADKL-----PTPPRKKQSAIN------MLEEKNRVAEYRC---SIPYKEEVNEKL 367
+A +L R K+ +N +E + R+ +R S P EE+ ++
Sbjct: 532 SNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQV 591
Query: 368 KGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNL 427
+ + +L+E G+V + LHD+++EE E+ L HSER+AIAYGLISTP T LRI KNL
Sbjct: 592 EWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNL 651
Query: 428 RICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
R C +CH A K++SK+V RE++VRD RFHHFKDG CSCGDYW
Sbjct: 652 RACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
DS + LLK C L+ G+ VH + + F+ +V V N LI +Y KC + AR VF
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 182 D--KMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+ +PER + SW ++S Y NG + L +F QM++ V+PD
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPD 221
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISG 198
L+ G+ +H + K E ++ L MY KCG + A+ +FDKM NL W MISG
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 199 YTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEY-GIAP 257
Y NG + + +F +M V PD + SM EY G +
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA----RSMYEYVGRSD 353
Query: 258 CREHYL---EVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
R+ +I++ G + E V L+ V +W A+ +HG
Sbjct: 354 YRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
L + + S Y +L+ L K++H L + +LI G
Sbjct: 12 LYTNSGIHSDSFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGD 68
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ AR+VFD +P + W +I GY+ N D LL++ M+ A V PD TF
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTF 122
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/389 (38%), Positives = 215/389 (55%), Gaps = 26/389 (6%)
Query: 108 LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGM 167
+N ++G G +S A+L + SL GK++H KS V V+N LI M
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 168 YGKCGGMKDARRVFDKMP-ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
Y K G + A R FD + ER+ SW MI +G ++ L +F+ M G+ PD T
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 227 FXXXXXXXXXXXXXXXGFMHFESMKEYG-IAPCREHYLEVINILGNAGQLNEAEEFVEKM 285
+ G +F+ MK+ I P HY ++++ G AG L EA+EF+EKM
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Query: 286 PLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA------------------ 327
P+E V W +L + R+H +IDL A E L+ +P + A
Sbjct: 578 PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637
Query: 328 ---DKLPTPPRKKQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVP 381
+ KK+ + +E K++V + + P K E+ +K + ++++ GYVP
Sbjct: 638 KIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVP 697
Query: 382 DTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMS 441
DT VLHD++EE KE+ L++HSE+LAIA+GLISTP +TTLRI+KNLR+C DCH AIK +S
Sbjct: 698 DTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFIS 757
Query: 442 KIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
K+VGRE+IVRD RFHHFKDG CSC DYW
Sbjct: 758 KLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 106 GKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVN 161
G+ ++A+ +MG G +L + +E+GK+VH F+ K G V V+
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
N L+ MY KCG A+ VFD+M R++SSW MI+ + G+ D + F+QM +
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 33/133 (24%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR-------- 179
++L C + L GK++H + + F+ V N LI MY +CGG++ ARR
Sbjct: 284 SVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Query: 180 -------------------------VFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQ 214
+F + +R++ +W MI GY +G + + +F+
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRS 403
Query: 215 MKQAGVEPDGETF 227
M G P+ T
Sbjct: 404 MVGGGQRPNSYTL 416
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 209/361 (57%), Gaps = 24/361 (6%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
Y +L C +G LE GK VH ++ KS N L+ MY K G + DAR++FD++
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFM 245
+R++ SW +++ Y +G G + + F++M++ G+ P+ +F G+
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 246 HFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
++E MK+ GI P HY+ V+++LG AG LN A F+E+MP+E IW+AL N R+H
Sbjct: 385 YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHK 444
Query: 306 DIDLEDRAEELLIGFDPSK-----------ASADKLPTPPR----------KKQSAINML 344
+ +L A E + DP AS + R KK+ A + +
Sbjct: 445 NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Query: 345 EEKNRVAEYRCSI---PYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQY 401
E +N + + + P +EE+ K + + +++E GYVPDT +V+ +D++E+E LQY
Sbjct: 505 EIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQY 564
Query: 402 HSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKD 461
HSE++A+A+ L++TPP +T+ I KN+R+CGDCH AIK+ SK+VGRE+IVRD RFHHFKD
Sbjct: 565 HSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKD 624
Query: 462 G 462
Sbjct: 625 A 625
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
+L G AD Y LLK C L G+ VH + +S F ++ + N L+ MY KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+++AR+VF+KMP+R+ +W +ISGY+ + R D LL F QM + G P+ T
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTL 164
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
G ++H F K F+ V V + L+ +Y + G M DA+ VFD + RN SW +I+G+
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 202 NGRGDDGLLVFQQMKQAGVEP 222
+ L +FQ M + G P
Sbjct: 240 RSGTEKALELFQGMLRDGFRP 260
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 224/405 (55%), Gaps = 30/405 (7%)
Query: 96 NADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N+ + E GK +AL E+ G D ++LL C G+L GKRVH ++ K
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
+ +N L+ +Y +CG +++A+ +FD+M ++N SW +I G VNG G + + +
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 212 FQQMKQA-GVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINIL 269
F+ M+ G+ P TF GF +F M+E Y I P EH+ ++++L
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 270 GNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSK----- 324
AGQ+ +A E+++ MP++ V IW+ L +HGD DL + A ++ +P+
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 325 ------ASADKLPTPPR----------KKQSAINMLEEKNRVAEYRC---SIPYKEEVNE 365
AS + + KK +++E NRV E+ S P + +
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 490
Query: 366 KLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIK 425
KLK ++G+LR GYVP V D++EEEKE A+ YHSE++AIA+ LISTP R+ + ++K
Sbjct: 491 KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVK 550
Query: 426 NLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
NLR+C DCH AIK++SK+ RE++VRD RFHHFK+G CSC DYW
Sbjct: 551 NLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 6/185 (3%)
Query: 48 RNGTSNSRSAHKAPHLQKANNNTSIEPKLKLDQSVHQNQDTPFAASSSNADLMSLCEEGK 107
R+G S S A HL + P + V + P N + E G
Sbjct: 42 RHGVSIS-DAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGN 100
Query: 108 LNQALELMGHGAVA-----DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNN 162
A L V+ D+ Y L+K + G+ +H + +S F + V N
Sbjct: 101 SISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQN 160
Query: 163 RLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEP 222
L+ +Y CG + A +VFDKMPE++L +W +I+G+ NG+ ++ L ++ +M G++P
Sbjct: 161 SLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 220
Query: 223 DGETF 227
DG T
Sbjct: 221 DGFTI 225
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 224/405 (55%), Gaps = 30/405 (7%)
Query: 96 NADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N+ + E GK +AL E+ G D ++LL C G+L GKRVH ++ K
Sbjct: 58 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 117
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
+ +N L+ +Y +CG +++A+ +FD+M ++N SW +I G VNG G + + +
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 212 FQQMKQA-GVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINIL 269
F+ M+ G+ P TF GF +F M+E Y I P EH+ ++++L
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 270 GNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSK----- 324
AGQ+ +A E+++ MP++ V IW+ L +HGD DL + A ++ +P+
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 297
Query: 325 ------ASADKLPTPPR----------KKQSAINMLEEKNRVAEYRC---SIPYKEEVNE 365
AS + + KK +++E NRV E+ S P + +
Sbjct: 298 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 357
Query: 366 KLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIK 425
KLK ++G+LR GYVP V D++EEEKE A+ YHSE++AIA+ LISTP R+ + ++K
Sbjct: 358 KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVK 417
Query: 426 NLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
NLR+C DCH AIK++SK+ RE++VRD RFHHFK+G CSC DYW
Sbjct: 418 NLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
G+ +H + +S F + V N L+ +Y CG + A +VFDKMPE++L +W +I+G+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 202 NGRGDDGLLVFQQMKQAGVEPDGETF 227
NG+ ++ L ++ +M G++PDG T
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTI 92
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 211/378 (55%), Gaps = 25/378 (6%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G + S + + L C D +LE GK++H L K + V N L+ MY KCG +++A
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA 463
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
+F +M +++ SW MI+GY+ +G G+ L F+ MK+ G++PD T
Sbjct: 464 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 238 XXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQA 296
G +F +M ++YG+ P +HY ++++LG AG L +A ++ MP E IW
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 297 LRNFARIHGDIDLEDRAEELLIGFDPSKAS-----------------ADKLPTPPR---- 335
L +R+HG+ +L + A + + +P + KL R
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 336 KKQSAINMLEEKNRVAEYRCSI---PYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDE 392
KK + +E +N+ + P K+E+ L+ L ++++AGYV T VLHD++E
Sbjct: 644 KKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEE 703
Query: 393 EEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 452
EEKE+ ++YHSERLA+AYG++ +R+IKNLR+C DCHNAIK M++I GR +I+RD
Sbjct: 704 EEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRD 763
Query: 453 NKRFHHFKDGKCSCGDYW 470
N RFHHFKDG CSCGDYW
Sbjct: 764 NNRFHHFKDGSCSCGDYW 781
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
V N +I Y +CG + +A+ +FDKMP+R+ SW MI+GY+ +G + L +F QM++
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 218 AGVEPDGETF 227
G + +F
Sbjct: 403 EGGRLNRSSF 412
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 37 NYAAPDKLHPRRN---GTSNSRSAHKAPHLQKANNNTSIEPKLKLDQSVHQNQDTPFAAS 93
+Y + + L R N G +N S +A Q + T +P LK S
Sbjct: 17 HYTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQT--KPLLKCGDS---------DIK 65
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSS 153
N + S G+ N+AL + S Y ++ +G E +++ + + +
Sbjct: 66 EWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER- 124
Query: 154 FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQ 213
++ N +I Y + + AR +F+ MPER++ SW M+SGY NG DD VF
Sbjct: 125 ---DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 214 QM 215
+M
Sbjct: 182 RM 183
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESG--KRVHEFLKK 151
S N + + GK+++A +L V D + A++ SG +++ + E K
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV-----SGYIQNRMVEEARELFDK 306
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
EV N L G Y + M+ A+ +FD MP RN+S+W MI+GY G+ + +
Sbjct: 307 MPERNEVSWNAMLAG-YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 212 FQQMKQ----------AGVEPDGETF 227
F +M + AG G +F
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSF 391
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 225/405 (55%), Gaps = 30/405 (7%)
Query: 96 NADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
NA + + N+AL E+ G + L++L C GSL+ GK +H++ KK
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
SF V+VN LI M+ KCG + DA +F+KM ++ +W MI Y +G+ + +L+
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 212 FQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILG 270
F++M+ V+PD TF G +F M ++GI P +HY ++++L
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 271 NAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKAS---- 326
AG L +A EF++K+P+ +W+ L H ++DL ++ E + D S
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVI 438
Query: 327 -------------ADKLPTPPRKKQSA----INMLEEKNRVAEYRCSIPYKE---EVNEK 366
D L + +++ + +E N V E+ K +++
Sbjct: 439 LSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRA 498
Query: 367 LKGLSGQLREAGYVPDTRYVLH-DIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIK 425
L + +L+ +GYVPDT V+H +++++EKE L+YHSE+LAI +GL++TPP TT+R++K
Sbjct: 499 LDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVK 558
Query: 426 NLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
NLR+C DCHNA K++S I GR++++RD +RFHHF+DGKCSCGD+W
Sbjct: 559 NLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 7/210 (3%)
Query: 112 LELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKC 171
+E++ G + D+ + +LLK C + +LE G+++H K + V V LI MY +C
Sbjct: 118 VEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTEC 177
Query: 172 GGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXX 231
+ AR VFD++ E + + MI+GY R ++ L +F++M+ ++P+ T
Sbjct: 178 EDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVL 237
Query: 232 XXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
G + K++ + +I++ G L++A EKM +
Sbjct: 238 SSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DT 296
Query: 292 DIWQALRNFARIHGDIDLEDRAEELLIGFD 321
W A+ HG +AE+ ++ F+
Sbjct: 297 QAWSAMIVAYANHG------KAEKSMLMFE 320
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 222/411 (54%), Gaps = 38/411 (9%)
Query: 94 SSNADLMSLCEEGKLNQALEL---------MGHGAVADSSVYLALLKLCEDSGSLESGKR 144
S N+ + + G N+A E+ + A+ S+V LA+ SG+L GK
Sbjct: 253 SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV----SHSGALRIGKC 308
Query: 145 VHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGR 204
+H+ + + +V V +I MY KCG ++ AR+ FD+M +N+ SW MI+GY ++G
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 205 GDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYL 263
L +F M +GV P+ TF G+ F +MK +G+ P EHY
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428
Query: 264 EVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPS 323
++++LG AG L +A + +++M ++ IW +L RIH +++L + + L D S
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSS 488
Query: 324 K-----------ASADKLPTPPRK----------KQSAINMLEEKNRVAEYRCSI---PY 359
A A + R K ++LE V + P
Sbjct: 489 NCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQ 548
Query: 360 KEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRT 419
+E++ E L L+ +L EAGYV +T V HD+DEEEKE L+ HSE+LAIA+G+++T P +
Sbjct: 549 REKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGS 608
Query: 420 TLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
T+ ++KNLR+C DCHN IK++SKIV RE +VRD KRFHHFKDG CSCGDYW
Sbjct: 609 TVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 9/165 (5%)
Query: 52 SNSRSAHKAPHLQKANNNTSIEPKLKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQA 111
S SR H H ++ N T + ++ F+ +S ADL + + A
Sbjct: 12 SVSRLLHTERHTERQNLTTLFNR--------YVDKTDVFSWNSVIADLARSGDSAEALLA 63
Query: 112 LELMGHGAVADS-SVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGK 170
M ++ + S + +K C + SGK+ H+ + ++ V++ LI MY
Sbjct: 64 FSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYST 123
Query: 171 CGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
CG ++DAR+VFD++P+RN+ SW MI GY +NG D + +F+ +
Sbjct: 124 CGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL 168
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 216/391 (55%), Gaps = 30/391 (7%)
Query: 110 QALEL---MGHGAVADSSVYLA-LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLI 165
+AL+L M + V +V LA L C G+LE GK +H +L K+ + + LI
Sbjct: 230 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 289
Query: 166 GMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGE 225
MY KCG M++A VF + ++++ +W +ISGY +G G + + F +M++ G++P+
Sbjct: 290 DMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 349
Query: 226 TFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEK 284
TF G + F SM ++Y + P EHY ++++LG AG L+EA+ F+++
Sbjct: 350 TFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQE 409
Query: 285 MPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP-------SKASADKLPTPPRKK 337
MPL+ IW AL RIH +I+L + E+LI DP KA+ + K
Sbjct: 410 MPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKA 469
Query: 338 QSAINMLEEKNRVAEYRCSI-----------------PYKEEVNEKLKGLSGQLREAGYV 380
+++E+ CS P E++ K + + +L E GYV
Sbjct: 470 AETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYV 529
Query: 381 PDTRYVLHD-IDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKI 439
P+ +L D +D++E+E + HSE+LAI YGLI T P T +RI+KNLR+C DCH K+
Sbjct: 530 PELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKL 589
Query: 440 MSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
+SKI R++++RD RFHHF+DGKCSCGDYW
Sbjct: 590 ISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
++ A ++ + +LLK C + + E ++H + K + +V N LI Y G
Sbjct: 106 MLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGN 165
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
K A +FD++PE + SW +I GY G+ D L +F++M +
Sbjct: 166 FKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 225/418 (53%), Gaps = 29/418 (6%)
Query: 82 VHQNQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVA----DSSVYLALLKLCEDSG 137
+ + Q S + + + GK +ALEL VA + ++L C +
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 138 SLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMIS 197
+L G+ H F + V V + LI MY KCG + ++ VF+ MP +NL W +++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 198 GYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIA 256
G++++G+ + + +F+ + + ++PD +F G+ +F+ M +EYGI
Sbjct: 463 GFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
Query: 257 PCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEEL 316
P EHY ++N+LG AG+L EA + +++MP E +W AL N R+ ++DL + A E
Sbjct: 523 PRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEK 582
Query: 317 LIGFDPSKASA---------------------DKLPTPPRKKQSAINMLEEKNRVAEYRC 355
L +P +K+ + KK + ++ KNRV
Sbjct: 583 LFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLA 642
Query: 356 ---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGL 412
S P +++ EK+ +S ++R++G+ P+ + LHD++E+E+E+ L HSE+LA+ +GL
Sbjct: 643 GDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGL 702
Query: 413 ISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
++TP T L++IKNLRICGDCH IK +S GRE+ +RD RFHHFKDG CSCGD+W
Sbjct: 703 LNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
+ HG + DS V L K+C + + + GK++H S + + V + MY +CG
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXX 233
M DAR+VFD+M ++++ + ++ Y G ++ + + +M+ +G+E + ++
Sbjct: 167 MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
Query: 234 XXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLN 276
+ F+ + G P + V+ +G++ LN
Sbjct: 227 FNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 223/396 (56%), Gaps = 33/396 (8%)
Query: 108 LNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNR 163
L +AL+L+ G DS +Y +L +LE G VH ++ +V V +
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659
Query: 164 LIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG-VEP 222
L+ MY KCG + A R F+ MP RN SW MISGY +G+G++ L +F+ MK G P
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719
Query: 223 DGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEF 281
D TF GF HFESM + YG+AP EH+ + ++LG AG+L++ E+F
Sbjct: 720 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 779
Query: 282 VEKMPLELGVDIWQ-ALRNFARIHG-DIDLEDRAEELLIGFDPSKA-------------- 325
+EKMP++ V IW+ L R +G +L +A E+L +P A
Sbjct: 780 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 839
Query: 326 -------SADKLPTPPRKKQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLR 375
+ K+ KK++ + + K+ V + S P + + +KLK L+ ++R
Sbjct: 840 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899
Query: 376 EAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTT-LRIIKNLRICGDCH 434
+AGYVP T + L+D+++E KE+ L YHSE+LA+A+ L + T +RI+KNLR+CGDCH
Sbjct: 900 DAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCH 959
Query: 435 NAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
+A K +SKI GR++I+RD+ RFHHF+DG CSC D+W
Sbjct: 960 SAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 141 SGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYT 200
+ + H L K+ + +V + N LI Y + G AR+VFD+MP RN SW ++SGY+
Sbjct: 19 AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYS 78
Query: 201 VNGRGDDGLLVFQQMKQAGVEPDGETF 227
NG + L+ + M + G+ + F
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAF 105
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 132 LCEDSGSLESGKRVH-EFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS 190
L E+ G L+ G+ VH + + V + N L+ MY KCG + DARRVF M +++
Sbjct: 323 LAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 191 SWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXG-FMHFES 249
SW MI+G NG + + ++ M++ + P T G +H ES
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 441
Query: 250 MKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMP 286
+K GI ++ + G LNE + MP
Sbjct: 442 LK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 80/201 (39%), Gaps = 21/201 (10%)
Query: 140 ESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE-RNLSSWCLMISG 198
E GK++H K++ E N LI YGKCG M ++F +M E R+ +W MISG
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 199 YTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGF-MHFESMKEYGIAP 257
Y N L + M Q G D + G +H S++
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR-----A 648
Query: 258 CREHYLEV----INILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRA 313
C E + V +++ G+L+ A F MP+ + +AR HG +
Sbjct: 649 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYAR-HG------QG 701
Query: 314 EELLIGFDPSKASADKLPTPP 334
EE L F+ K TPP
Sbjct: 702 EEALKLFETMKLDGQ---TPP 719
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGS--LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGK 170
+++ G ++ ++++L+ C++ GS + G+++H + K S+ + V+N LI MY K
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 171 C-GGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
C G + A F + +N SW +IS Y+ G +F M+ G P TF
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF 209
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 203/378 (53%), Gaps = 25/378 (6%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G + D L K +LE G+++H K + + V L+ MY KCG + DA
Sbjct: 613 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
+F ++ N+++W M+ G +G G + L +F+QMK G++PD TF
Sbjct: 673 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 732
Query: 238 XXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQA 296
+ H SM +YGI P EHY + + LG AG + +AE +E M +E +++
Sbjct: 733 GLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 792
Query: 297 LRNFARIHGDIDLEDRAEELLIGFDPSKASADKLPTP---------------------PR 335
L R+ GD + R L+ +P +SA L +
Sbjct: 793 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV 852
Query: 336 KKQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDE 392
KK + +E KN++ + S E + K+K + +++ GYVP+T + L D++E
Sbjct: 853 KKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEE 912
Query: 393 EEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 452
EEKE+AL YHSE+LA+A+GL+STPP T +R+IKNLR+CGDCHNA+K ++K+ RE+++RD
Sbjct: 913 EEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRD 972
Query: 453 NKRFHHFKDGKCSCGDYW 470
RFH FKDG CSCGDYW
Sbjct: 973 ANRFHRFKDGICSCGDYW 990
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%)
Query: 117 HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKD 176
G +D + K C ++ GK+VH + KS ++ ++ V++ ++ MY KCG M
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 177 ARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
A+ FD +P + +W MISG NG + VF QM+ GV PD T
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D ++ +L SL G++VH K + + V+N LI MY K AR VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
D M ER+L SW +I+G NG + + +F Q+ + G++PD T
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+ L+ S L GK H + N E + N LI MY KCG + ARRVFDKMP
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 186 ERNLSSWCLMISGYT-----VNGRGDDGLLVFQQMKQ 217
+R+L SW +++ Y V L+F+ ++Q
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQ 138
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
+LKLC SG + + + H + K +G+ V L+ +Y K G +K+ + +F++MP R+
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ W LM+ Y G ++ + + +G+ P+ T
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 214/384 (55%), Gaps = 26/384 (6%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
++ G AD S + +LK SL GK++H F+ +S V + L+ MY KCG
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 501
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
+KDA +VF++MP+RN SW +IS + NG G+ + F +M ++G++PD +
Sbjct: 502 SIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Query: 233 XXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
G +F++M YGI P ++HY ++++LG G+ EAE+ +++MP E
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE 621
Query: 292 DIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA---------------DKLPTPPR- 335
+W ++ N RIH + L +RA E L + + +A +K+ +
Sbjct: 622 IMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKA 681
Query: 336 ------KKQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYV 386
KK A + +E +++ + + P +E+ K+ L+ ++ GY PDT V
Sbjct: 682 MRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSV 741
Query: 387 LHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGR 446
+ D+DE+ K ++L+YHSERLA+A+ LISTP + ++KNLR C DCH AIK++SKIV R
Sbjct: 742 VQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKR 801
Query: 447 ELIVRDNKRFHHFKDGKCSCGDYW 470
E+ VRD RFHHF +G CSCGDYW
Sbjct: 802 EITVRDTSRFHHFSEGVCSCGDYW 825
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 15/188 (7%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+ +L + + SL+ G+++H ++ + + V N L+ MY KC ++A +F +P
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFM 245
+R SW +ISGY G GL +F +M+ + + D TF G
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG-- 471
Query: 246 HFESMKEYGIAPCREHYLE-------VINILGNAGQLNEAEEFVEKMPLELGVDIWQALR 298
K+ R LE ++++ G + +A + E+MP V W AL
Sbjct: 472 -----KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALI 525
Query: 299 NFARIHGD 306
+ +GD
Sbjct: 526 SAHADNGD 533
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 207/371 (55%), Gaps = 27/371 (7%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
+++L +C SL GK+VH L + F+ +V V + L+ MY KCG + ++ +FD+ P
Sbjct: 335 ISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG-VEPDGETFXXXXXXXXXXXXXXXGFM 245
+++ W +ISGY +G G++ L VF +M +G +P+ TF G
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLK 454
Query: 246 HFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIH 304
+ESM+ +G+ P HY ++++LG AG+ NEA E ++ M +E +W +L R H
Sbjct: 455 IYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Query: 305 GDIDLEDRAEELLIGFDPSKAS---------------ADK------LPTPPRKKQSAINM 343
+D+ + + LI +P + AD + T +K +
Sbjct: 515 SQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSW 574
Query: 344 LEEKNRVAEY-RCSI---PYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKAL 399
E +N+V + R I P +E + + L L G LREAGY PD Y LHD+DEEEK +L
Sbjct: 575 TEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSL 634
Query: 400 QYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHF 459
+YHSERLA+AY L+ +R++KNLR+C DCH AIKI+SK+ RE+I+RD RFHHF
Sbjct: 635 KYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHF 694
Query: 460 KDGKCSCGDYW 470
++G+CSC DYW
Sbjct: 695 RNGECSCKDYW 705
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
N L+ Y K G + +AR+VFD MPERN+ SW ++ GY NG+ D +F +M +
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 99 LMSLCEEGKLNQALELMGHGAVADSSVYLALLK-LCEDSGSLESGKRVHEFLKKSSFNGE 157
L+ ++G+++ A +L D+ +++ LC++ G ++ + + + + + S
Sbjct: 148 LIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKE-GRVDEAREIFDEMSERS---- 202
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
V ++ YG+ + DAR++FD MPE+ SW M+ GY NGR +D +F+ M
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 175 KDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
+DAR++FD+MP+RN+ SW ++SGY NG D+ VF M + V
Sbjct: 65 RDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV 110
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 226/404 (55%), Gaps = 31/404 (7%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N+ + + + + ALEL G +A+ + ++L+ C LE G + H + K
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
++ ++ +NN L+ MY KCG ++DA RVF++M ER++ +W MISG NG + L +
Sbjct: 289 --YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 212 FQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILG 270
F++MK +G +P+ T G+ +F SMK+ YGI P REHY +I++LG
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 271 NAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKA----- 325
AG+L++A + + +M E W+ L R+ ++ L + A + +I DP A
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 326 ------------SADKLPTPPR----KKQSAINMLEEKNRVAEYRC---SIPYKEEVNEK 366
S +++ T R KK+ + +E ++ + S P EV++K
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKK 526
Query: 367 LKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKN 426
L L +L GYVP+T +VL D++ E+ E +L++HSE+LA+A+GL++ P +RI KN
Sbjct: 527 LNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKN 586
Query: 427 LRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
LRICGDCH K+ SK+ R +++RD R+HHF+DGKCSCGDYW
Sbjct: 587 LRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 97 ADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKS 152
++ LC + L +A++ M HG ADS+ Y L+K C + ++ G + L
Sbjct: 31 SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHL--- 87
Query: 153 SFNGE---VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
FNG + + N LI MY K + DA ++FD+MP+RN+ SW MIS Y+ L
Sbjct: 88 YFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKAL 147
Query: 210 LVFQQMKQAGVEPDGETF 227
+ M + V P+ T+
Sbjct: 148 ELLVLMLRDNVRPNVYTY 165
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 61 PHLQKANNNTSIEPKLKLDQSVHQNQD-TPFAASSSNADLMSLCEEGKLNQ-ALELM--- 115
P + N ++ K L HQ D P S ++S + K++Q ALEL+
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 116 -GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGM 174
+ Y ++L+ C + + +H + K +V V + LI ++ K G
Sbjct: 154 LRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 175 KDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+DA VFD+M + W +I G+ N R D L +F++MK+AG + T
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/463 (33%), Positives = 240/463 (51%), Gaps = 37/463 (7%)
Query: 40 APDKLHPRRNGTSNSRSAHKAPHLQKANNNTS-IEPKLKLDQSVHQNQDTPFAASSSNAD 98
+P ++H + T+ RS+ L A +E K+ + ++A
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM----- 465
Query: 99 LMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDS-GSLESGKRVHEFLKKSS 153
L + G+ A+++ G G + + ++L +C + S+ GK+ H F KS
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 154 FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQ 213
+ + V++ L+ MY K G ++ A VF + E++L SW MISGY +G+ L VF+
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 214 QMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNA 272
+MK+ V+ DG TF G +F+ M ++ IAP +EH ++++ A
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 273 GQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKLPT 332
GQL +A + +E MP G IW+ + R+H +L A E +I P ++A L +
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705
Query: 333 PPR---------------------KKQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLK 368
KK+ + +E KN+ + S P K+++ KL+
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 765
Query: 369 GLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLR 428
LS +L++ GY PDT YVL DID+E KE L HSERLAIA+GLI+TP + L IIKNLR
Sbjct: 766 DLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLR 825
Query: 429 ICGDCHNAIKIMSKIVGRELIVRDNKRFHHF-KDGKCSCGDYW 470
+CGDCH IK+++KI RE++VRD+ RFHHF DG CSCGD+W
Sbjct: 826 VCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 99 LMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSF 154
L +G+ +A L + G D S++ ++LK+ G+++H K F
Sbjct: 65 LFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGF 124
Query: 155 NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQ 214
+V V L+ Y K KD R+VFD+M ERN+ +W +ISGY N D+ L +F +
Sbjct: 125 LDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMR 184
Query: 215 MKQAGVEPDGETF 227
M+ G +P+ TF
Sbjct: 185 MQNEGTQPNSFTF 197
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 90 FAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
+A +S N ++++L + + G +S + A L + + G G +VH +
Sbjct: 169 YARNSMNDEVLTL--------FMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
K+ + + V+N LI +Y KCG ++ AR +FDK +++ +W MISGY NG + L
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 210 LVFQQMK 216
+F M+
Sbjct: 281 GMFYSMR 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 124 SVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK 183
S + +++KLC + L +++H + K F + + L+ Y KC M DA R+F +
Sbjct: 296 SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE 355
Query: 184 MP-ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ N+ SW MISG+ N ++ + +F +MK+ GV P+ T+
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 215/375 (57%), Gaps = 26/375 (6%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
+S + +L C +L GK +H + K++ +V V + L+ MY KCG ++ +R+VF
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
D++P++N+ +W ++I Y ++G G + + + + M GV+P+ TF
Sbjct: 576 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 242 XGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELG-VDIWQALRN 299
G F MK +YG+ P +HY V+++LG AG++ EA + + MP + W +L
Sbjct: 636 EGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLG 695
Query: 300 FARIHGDIDLEDRAEELLIGFDPSKAS--------------ADKLPTPPR-------KKQ 338
+RIH ++++ + A + LI +P+ AS DK R +K+
Sbjct: 696 ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755
Query: 339 SAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEK 395
+ +E + V ++ S P E+++ L+ L ++R+ GYVPDT VLH+++E+EK
Sbjct: 756 PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEK 815
Query: 396 EKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 455
E L HSE+LAIA+G+++T P T +R+ KNLR+C DCH A K +SKIV RE+I+RD +R
Sbjct: 816 EILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRR 875
Query: 456 FHHFKDGKCSCGDYW 470
FH FK+G CSCGDYW
Sbjct: 876 FHRFKNGTCSCGDYW 890
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 96 NADLMSLCEEGKLNQALE----LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEF-LK 150
N L SLC+ +L +ALE ++ G D ++L C L +GK +H + LK
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 151 KSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLL 210
S + V + L+ MY C + RRVFD M +R + W MI+GY+ N + LL
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 211 VFQQMKQ-AGVEPDGETF 227
+F M++ AG+ + T
Sbjct: 391 LFIGMEESAGLLANSTTM 408
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G +A+S+ ++ C SG+ + +H F+ K + + V N L+ MY + G + A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMK 216
R+F KM +R+L +W MI+GY + +D LL+ +M+
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 23 VSSHLNFASSKPLCNYAAPDKLHPRRNGTSNSRSAHKAPHLQKANNNTSIE--------- 73
+S L F S P + P +L P S HK P+L +A ++ E
Sbjct: 1 MSCPLAFTFSLP-SIFPFPSQLLPF--------SRHKHPYLLRATPTSATEDVASAVSGA 51
Query: 74 PKLKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLC 133
P + + QS S ++L+ E L ++++ G D+ + ALLK
Sbjct: 52 PSIFISQSRSPEWWIDLLRSKVRSNLL---REAVLTY-VDMIVLGIKPDNYAFPALLKAV 107
Query: 134 EDSGSLESGKRVHEFLKKSSFNGE-VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSW 192
D +E GK++H + K + + V V N L+ +Y KCG +VFD++ ERN SW
Sbjct: 108 ADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSW 167
Query: 193 CLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+IS + + L F+ M VEP T
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTL 202
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 94 SSNADLMSLCEEGKLNQALE----LMGHGAVADSSVYLALLKLCED---SGSLESGKRVH 146
S N+ + SLC K ALE ++ S ++++ C + L GK+VH
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225
Query: 147 EF-LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRG 205
+ L+K N + N L+ MYGK G + ++ + R+L +W ++S N +
Sbjct: 226 AYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 206 DDGLLVFQQMKQAGVEPDGETF 227
+ L ++M GVEPD T
Sbjct: 284 LEALEYLREMVLEGVEPDEFTI 305
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 217/406 (53%), Gaps = 30/406 (7%)
Query: 94 SSNADLMSLCEEGK----LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S NA ++ + G+ LN ++ D+ Y++++ + K +H +
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+S + V V L+ MY KCG + AR +FD M ER++++W MI GY +G G L
Sbjct: 465 MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAAL 524
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINI 268
+F++M++ ++P+G TF G F MKE Y I +HY ++++
Sbjct: 525 ELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASAD 328
LG AG+LNEA +F+ +MP++ V+++ A+ +IH +++ ++A E L +P
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYH 644
Query: 329 KLPT---------------------PPRKKQSAINMLEEKNRVAEY---RCSIPYKEEVN 364
L +K +M+E KN V + + P +++
Sbjct: 645 VLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIY 704
Query: 365 EKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRII 424
L+ L ++EAGYVPDT VL ++ + KE+ L HSE+LAI++GL++T TT+ +
Sbjct: 705 AFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVR 763
Query: 425 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
KNLR+C DCHNA K +S + GRE++VRD +RFHHFK+G CSCGDYW
Sbjct: 764 KNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 8/194 (4%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+ LLK+C D L GK +H L KS F+ ++ L MY KC + +AR+VFD+MP
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGF- 244
ER+L SW +++GY+ NG L + + M + ++P T G
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 245 MHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIH 304
+H +M+ G ++++ G L A + + M LE V W ++ I
Sbjct: 258 IHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSM-----ID 310
Query: 305 GDIDLEDRAEELLI 318
+ E+ E +LI
Sbjct: 311 AYVQNENPKEAMLI 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISG 198
+ GK +H + +S F+ V ++ L+ MY KCG ++ AR++FD M ERN+ SW MI
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 199 YTVNGRGDDGLLVFQQMKQAGVEP 222
Y N + +L+FQ+M GV+P
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKP 335
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 121 ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
D SV + L C D G LE G+ +H+ + + V V N LI MY KC + A +
Sbjct: 336 TDVSV-MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
F K+ R L SW MI G+ NGR D L F QM+ V+PD T+
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 208/376 (55%), Gaps = 27/376 (7%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D L L+ C + G+L+ GK+VH+F+ ++ +G + ++N L+ MY +CG M A +VF
Sbjct: 216 DGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVF 275
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
M ERN+ SW +ISG +NG G + + F +M + G+ P+ +T
Sbjct: 276 YGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVA 335
Query: 242 XGFMHFESMK--EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRN 299
G M F+ M+ E+ I P HY V+++LG A L++A ++ M ++ IW+ L
Sbjct: 336 EGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLG 395
Query: 300 FARIHGDIDLEDRAEELLIGFDPSKAS-----------------ADKLPTPPRKK----Q 338
R+HGD++L +R LI +A +L + ++K +
Sbjct: 396 ACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTK 455
Query: 339 SAINMLEEKNRVAEY---RCSIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDID-EEE 394
+ +E + V E+ S P KEE+ + L ++ QL+ AGYV + LH+++ EEE
Sbjct: 456 PGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEE 515
Query: 395 KEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 454
K AL+YHSE+LAIA+G++ TPP TT+R+ KNLR C DCHN K +S + R +IVRD
Sbjct: 516 KGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRS 575
Query: 455 RFHHFKDGKCSCGDYW 470
RFHHFK G CSC D+W
Sbjct: 576 RFHHFKGGSCSCNDFW 591
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 4/171 (2%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
LK C SG L G ++H + F + + L+ +Y C DA +VFD++P+R+
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQ---AGVEPDGETFXXXXXXXXXXXXXXXGFMH 246
SW ++ S Y N R D L++F +MK V+PDG T G
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 247 FESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
+ + E G++ ++++ G +++A + M E V W AL
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTAL 289
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 248 bits (632), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 205/370 (55%), Gaps = 26/370 (7%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
+++L +C SL+ G++VH L + F+ +V V + L+ MY KCG + A+ VFD+
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMH 246
+++ W +ISGY +G G++ L +F +M +G P+ T G
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Query: 247 FESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
FESM+ ++ + P EHY +++LG AGQ+++A E +E M ++ +W AL + H
Sbjct: 455 FESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHS 514
Query: 306 DIDLEDRAEELLIGFDPSKASADKLPT---PPRKKQSAINMLEE---KNRVAEY-RCSI- 357
+DL + A + L +P A L + R K + ++ + N V+++ CS
Sbjct: 515 RLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Query: 358 -----------------PYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQ 400
P + + L+ G LREAGY PD +VLHD+DEEEK +L
Sbjct: 575 EVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLS 634
Query: 401 YHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFK 460
HSERLA+AYGL+ P +R++KNLR+CGDCH AIK++SK+ RE+I+RD RFHHF
Sbjct: 635 RHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFN 694
Query: 461 DGKCSCGDYW 470
+G+CSC DYW
Sbjct: 695 NGECSCRDYW 704
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSS 153
S A + +EG + +A L + + + D G ++ +++++ +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK- 170
Query: 154 FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQ 213
+V + +IG + G + +AR +FD+M ERN+ +W MI+GY N R D +F+
Sbjct: 171 ---DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 214 QMKQ 217
M +
Sbjct: 228 VMPE 231
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 208/385 (54%), Gaps = 17/385 (4%)
Query: 101 SLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNG 156
SLC +G +A+E++ + G D L L KLC +LE+ + VHE +
Sbjct: 93 SLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPC 152
Query: 157 EVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMK 216
+V N +I MY C + DA +VF++MPE N + C+M+ + NG G++ + +F + K
Sbjct: 153 DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 217 QAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQL 275
+ G +P+GE F G + F++M +EYGI P EHY V +L +G L
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 276 NEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKLPTPPR 335
+EA FVE+MP+E VD+W+ L N +R+HGD++L DR EL+ D ++ DK+ +
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRL--DKVSSAGL 330
Query: 336 KKQSAINML--EEKNRVAEYRCSI--------PYKEEVNEKLKGLSGQLREAGYVPDTRY 385
A + + E R Y S P + E L L QL+E GYVPDTRY
Sbjct: 331 VATKASDFVKKEPSTRSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRY 390
Query: 386 VLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVG 445
I E ++ + + E +A+ L+ + PR+ + ++ N+RI GDCH+ +K+MS I G
Sbjct: 391 YRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITG 450
Query: 446 RELIVRDNKRFHHFKDGKCSCGDYW 470
R++I RD K +H FK+G C C + W
Sbjct: 451 RDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 202/370 (54%), Gaps = 27/370 (7%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
++L C LE G+ +H K+ + V + L+ MYGKCG ++D+ + FD+MPE+
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQM--KQAGVEPDGETFXXXXXXXXXXXXXXXGFM 245
NL + +I GY G+ D L +F++M + G P+ TF G
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 246 HFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIH 304
F+SM+ YGI P EHY ++++LG AG + A EF++KMP++ + +W AL+N R+H
Sbjct: 435 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
Query: 305 GDIDLEDRAEELLIGFDP-----------SKASA----------DKLPTPPRKKQSAINM 343
G L A E L DP + A+A ++L KK + +
Sbjct: 495 GKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
Query: 344 LEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQ 400
+ KN+V ++ S +E+ L L ++ AGY PD + L+D++EEEK +
Sbjct: 555 ITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVS 614
Query: 401 YHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFK 460
+HSE+LA+A+GL+S P +RI KNLRICGDCH+ K +S V RE+IVRDN RFH FK
Sbjct: 615 HHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFK 674
Query: 461 DGKCSCGDYW 470
DG CSC DYW
Sbjct: 675 DGICSCKDYW 684
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 96 NADLMSLCEEGKLNQALELM-------GHGAVADSSVYLALLKLCEDSGSLESGKRVHEF 148
NA + + +G+ +A+E GH +S + A L C D L G ++H
Sbjct: 178 NAFISNSVTDGRPREAIEAFIEFRRIDGH---PNSITFCAFLNACSDWLHLNLGMQLHGL 234
Query: 149 LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDG 208
+ +S F+ +V V N LI YGKC ++ + +F +M +N SWC +++ Y N +
Sbjct: 235 VLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 294
Query: 209 LLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEV--- 265
+++ + ++ VE G S+ + + C E + V
Sbjct: 295 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG----RSIHAHAVKACVERTIFVGSA 350
Query: 266 -INILGNAGQLNEAEEFVEKMP 286
+++ G G + ++E+ ++MP
Sbjct: 351 LVDMYGKCGCIEDSEQAFDEMP 372
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
Query: 88 TPFAASSSNADLMS-LCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESG 142
TP S L+S L + G + AL E+ G V + + K +G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 143 KRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVN 202
K++H K +V V MY K DAR++FD++PERNL +W IS +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 203 GRGDDGLLVFQQMKQAGVEPDGETF 227
GR + + F + ++ P+ TF
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITF 212
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVE-VNNRLIGMYGKCGGMKDARRVFDKMPER 187
LLK + S+ G+ VH + K+ + + N LI MY K + AR V P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
N+ SW +ISG NG L+ F +M++ GV P+ TF
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 111
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 232/425 (54%), Gaps = 29/425 (6%)
Query: 75 KLKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALEL----MGHGAVADSSVYLALL 130
K++L +++ ++ + NA + E + L+L + G +SS + L
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 131 KLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS 190
C + +L+ G+++H+ + KS+ +V LI MY KCG + DA ++F+ M ++++
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Query: 191 SWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM 250
+W MISGY +G D L +F++M + PD TF G +FESM
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411
Query: 251 -KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDL 309
++Y + P +HY ++++LG AG+L EA + + MP ++ L R+H +++L
Sbjct: 412 VRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVEL 471
Query: 310 EDRAEELLIGFDPSKASA---------------DKLPTPPRKKQSAI------NMLEEKN 348
+ A E L+ + A+ D R K+S + + +E +N
Sbjct: 472 AEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRN 531
Query: 349 RVAEYRCSI---PYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSER 405
+V +R S P + +++KLK L +++ AGY P+ + LH+++EE+KEK L +HSE+
Sbjct: 532 KVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEK 591
Query: 406 LAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCS 465
LA+A+G I P + +++ KNLRICGDCH AIK +S+I RE+IVRD RFHHFKDG CS
Sbjct: 592 LAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCS 651
Query: 466 CGDYW 470
CGDYW
Sbjct: 652 CGDYW 656
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 206/369 (55%), Gaps = 26/369 (7%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
+L C +L +GK +H + KS +V + N L+ MYGKCG ++ +RRVFD M +
Sbjct: 342 TILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK 401
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF 247
+L+SW +M++ Y +NG ++ + +F+ M ++GV PDG TF G F
Sbjct: 402 DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLF 461
Query: 248 ESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGD 306
E MK E+ ++P EHY +++ILG AG++ EA + +E MP + IW +L N R+HG+
Sbjct: 462 ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGN 521
Query: 307 IDLEDRAEELLIGFDP---------SKASADK------------LPTPPRKKQSAINMLE 345
+ + + A + L +P S AD + KK++ + ++
Sbjct: 522 VSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQ 581
Query: 346 EKNRVAEYRCSIPYKEEVNEKLKGLSGQLREA----GYVPDTRYVLHDIDEEEKEKALQY 401
K+++ + Y+ +++ K + +L+EA GY P+T VLHD+DEE K +
Sbjct: 582 VKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCG 641
Query: 402 HSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKD 461
HSERLA Y LI T +RI KNLR+C DCH+ +KI+S++ R +++RD KRFHHF D
Sbjct: 642 HSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVD 701
Query: 462 GKCSCGDYW 470
G CSC DYW
Sbjct: 702 GICSCKDYW 710
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
LK C D L G+ +H + K + V N L+ +Y + G DAR+VFD M ERN+
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
+W +IS + R + +F++M++
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQE 330
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 26/240 (10%)
Query: 100 MSLCEEGKLNQALELM-----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEF-LKKSS 153
+ L + KL++A+ L+ ++ Y LL C + SL G ++ L S
Sbjct: 103 LGLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPS 162
Query: 154 FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSS---WCLMISGYTVNGRGDDGLL 210
++ ++LI ++ C + AR++FD + + +L + W M GY+ NG D L+
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 211 VFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGF-MHFESMKEYGIAPCREHYLEVI-NI 268
V+ M + +EP + G +H + +K +E +V+ N+
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKR------KEKVDQVVYNV 276
Query: 269 L----GNAGQLNEAEEFVEKMPLELGVDIWQALRNF----ARIHGDIDLEDRAEELLIGF 320
L +G ++A + + M E V W +L + R+H +L + +E +IGF
Sbjct: 277 LLKLYMESGLFDDARKVFDGMS-ERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF 335
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 202/391 (51%), Gaps = 25/391 (6%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRL 164
E ++ E++ G + A+L C SG+L SG R+H ++ + + + L
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTAL 334
Query: 165 IGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
+ MY KCG + A VF M +++ SW MI G+ V+GR + F+QM +G +PD
Sbjct: 335 VDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDE 394
Query: 225 ETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVE 283
F G F+SM+ +Y I P +HY+ V+++LG AG+LNEA E VE
Sbjct: 395 VVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVE 454
Query: 284 KMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP-----------SKASADKLPT 332
MP+ + W AL + H + + L+ DP + AS +
Sbjct: 455 NMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQD 514
Query: 333 PPRKKQSAINMLEEK-------------NRVAEYRCSIPYKEEVNEKLKGLSGQLREAGY 379
+++ S ++E+ N+ + S +E+ KL + + GY
Sbjct: 515 VEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGY 574
Query: 380 VPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKI 439
P + +HDI+EEEKE HSE+LA+ G + T P TT+RIIKNLRICGDCH+ +K
Sbjct: 575 NPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKY 634
Query: 440 MSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
+SKI R++++RD ++FHHFKDG+CSCGDYW
Sbjct: 635 VSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 218/400 (54%), Gaps = 34/400 (8%)
Query: 104 EEGKLNQALELMGHGAVADS-------SVYLALLKLCEDSGSLESGKRVHEFLKKSSFNG 156
+ G N+ALEL+ D ++ AL+ C +L GK++H + ++ N
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVA-CASLAALRIGKQIHAYALRNQQNA 510
Query: 157 -EVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
+ V+N LI MY KCG + DAR VFD M +N +W +++GY ++G G++ L +F +M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 216 KQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQ 274
++ G + DG T G +F MK +G++P EHY ++++LG AG+
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630
Query: 275 LNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRA----EELLIGFDPSK------ 324
LN A +E+MP+E +W A + RIHG ++L + A EL D S
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690
Query: 325 -ASADKLPTPPR----------KKQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGL 370
A+A + R KK+ + +E + + P+ +E+ + L
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDH 750
Query: 371 SGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRIC 430
++++ GYVP+T + LHD+D+EEK+ L HSE+LA+AYG+++TP +RI KNLR+C
Sbjct: 751 MQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVC 810
Query: 431 GDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
GDCH A MS+I+ ++I+RD+ RFHHFK+G CSC YW
Sbjct: 811 GDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 8/204 (3%)
Query: 94 SSNADLMSLCEEGKLNQALELMG-----HGAVADSSVYLALLKLCEDSGSLESGKRVHEF 148
S N+ + S + GK ALE+ G D+ + +L C G+ GK++H F
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254
Query: 149 LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDG 208
S + V N L+ MY KCG M +A VF M +++ SW M++GY+ GR +D
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 314
Query: 209 LLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINI 268
+ +F++M++ ++ D T+ M GI P + V++
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Query: 269 LGNAGQLNEAEE---FVEKMPLEL 289
+ G L +E + K P++L
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDL 398
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N+ + S + G N+ L L G D+ + + K C + S+ G+ H
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
+ F V V N L+ MY +C + DAR+VFD+M ++ SW +I Y G+ L +
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 212 FQQMK-QAGVEPDGETF 227
F +M + G PD T
Sbjct: 216 FSRMTNEFGCRPDNITL 232
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 73 EPKLKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKL 132
E K+K+D + +A + + +C + ++ G + +++L
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ--------MLSSGIKPNEVTLISVLSG 374
Query: 133 CEDSGSLESGKRVHEF-------LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
C G+L GK +H + L+K+ E V N+LI MY KC + AR +FD +
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 186 --ERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
ER++ +W +MI GY+ +G + L + +M
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 210/376 (55%), Gaps = 25/376 (6%)
Query: 119 AVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDAR 178
AV D S + +++ +C +S LE G+++H KSSF+ V + L+ +Y KCG + A
Sbjct: 214 AVNDYS-FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 179 RVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXX 238
+VF+++P +NL W M+ Y + + +F++MK +G++P+ TF
Sbjct: 273 QVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332
Query: 239 XXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALR 298
G +F+ MKE I P +HY ++++LG AG+L EA E + MP++ +W AL
Sbjct: 333 LVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 299 NFARIHGDIDLEDRAEELLIGFDP--------------------SKASADKLPTP-PRKK 337
+H + +L A + + P A A KL KK
Sbjct: 393 TSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 338 QSAINMLEEKNRVAEYRCSIPYKE---EVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEE 394
++ ++ +EE+N+V + E E+ EKL L ++ +AGY+ DT YVL ++D +E
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDE 512
Query: 395 KEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNK 454
K + ++YHSERLAIA+GLI+ P +R++KNLR+CGDCHNAIK MS R +IVRDN
Sbjct: 513 KNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNN 572
Query: 455 RFHHFKDGKCSCGDYW 470
RFH F+DGKCSC DYW
Sbjct: 573 RFHRFEDGKCSCNDYW 588
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
++M D V + K C + G+ VH K+ ++ +V V + L+ MY KCG
Sbjct: 106 KMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCG 165
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQ 214
+ AR++FD+MP+RN+ +W M+ GY G ++ L +F++
Sbjct: 166 EIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 205/367 (55%), Gaps = 26/367 (7%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
+K C G+ +G++ H L K F+ + N LI MY KCG +++AR+VF MP +
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFES 249
SW +I+ +G G + + V+++M + G+ PD T G +F+S
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 250 MKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDID 308
M+ Y I P +HY +I++L +G+ ++AE +E +P + +IW+AL + R+HG+++
Sbjct: 544 METVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Query: 309 LEDRAEELLIGFDPSK-----------ASADKLPTPPR----------KKQSAINMLEEK 347
L A + L G P A+ + R KK+ A + +E +
Sbjct: 604 LGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEME 663
Query: 348 NRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEE-EKEKALQYHS 403
+V + S P E V L+ L ++R GYVPDT +VLHD++ + KE L HS
Sbjct: 664 TQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHS 723
Query: 404 ERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGK 463
E++A+A+GL+ PP TT+RI KNLR CGDCHN + +S +V R++I+RD KRFHHF++G+
Sbjct: 724 EKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGE 783
Query: 464 CSCGDYW 470
CSCG++W
Sbjct: 784 CSCGNFW 790
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 76 LKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLK 131
L + + + D + NA + G +ALE++ G D Y ++++
Sbjct: 235 FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 132 LCEDSGSLESGKRVHEF-LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS 190
C +G L+ GK+VH + L++ F+ +N L+ +Y KCG +AR +F+KMP ++L
Sbjct: 295 ACATAGLLQLGKQVHAYVLRREDFS--FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 191 SWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM 250
SW ++SGY +G + L+F++MK+ + ++ G F M
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 251 KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVD 292
K G PC + I G +++ ++ L++G D
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL-LKIGFD 449
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 193/363 (53%), Gaps = 25/363 (6%)
Query: 133 CEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSW 192
C + SLE G + H S V V+N L+ +YGKCG + D+ R+F++M R+ SW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 193 CLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-K 251
M+S Y GR + + +F +M Q G++PDG T G +F+ M
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 252 EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLED 311
EYGI P HY +I++ +G+L EA F+ MP W L + R G++++
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Query: 312 RAEELLIGFDP--------------SKASADKLPTPPR-------KKQSAINMLEEKNRV 350
A E LI DP SK D + R KK+ + ++ K ++
Sbjct: 561 WAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKL 620
Query: 351 AEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLA 407
+ S PY +++ KL+ L+ ++ + GY PDT +V HD++E K K L YHSERLA
Sbjct: 621 HSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLA 680
Query: 408 IAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCG 467
IA+GLI P +R+ KNLR+C DCHNA K +S + GRE++VRD RFH FKDG CSCG
Sbjct: 681 IAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCG 740
Query: 468 DYW 470
D+W
Sbjct: 741 DFW 743
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
Query: 94 SSNADLMSLCEEGKLNQALE----LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S A + L + G +A+E + G D + ++L C G++ GK++H +
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+++F + V + LI MY KC + A+ VFD+M ++N+ SW M+ GY GR ++ +
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEV---- 265
+F M+++G++PD T G I HY+ V
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG----SQFHGKAITSGLIHYVTVSNSL 412
Query: 266 INILGNAGQLNEAEEFVEKMPLELGVDIWQALRN----FARIHGDIDLEDR 312
+ + G G ++++ +M + V W A+ + F R I L D+
Sbjct: 413 VTLYGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSAYAQFGRAVETIQLFDK 462
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
+ +LKL +G + GK++H + K F + V + L+ MY G + DA++VF + +
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMH 246
RN + ++ G G +D L +F+ G+E D ++
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 247 FESMKEYGIAPCREHYLEVINILGNAGQLNEAEEF 281
F MK G+ + + V+ G G +NE ++
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI 292
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 204/378 (53%), Gaps = 29/378 (7%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSF-NGEVEVNNRLIGMYGKCGGMKDARRV 180
D ++ + C + S K++H KS + + VNN LI +Y K G ++DAR V
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWV 403
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXX 240
FD+MPE N S+ MI GY +G G + LL++Q+M +G+ P+ TF
Sbjct: 404 FDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKV 463
Query: 241 XXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRN 299
G +F +MKE + I P EHY +I++LG AG+L EAE F++ MP + G W AL
Sbjct: 464 DEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523
Query: 300 FARIHGDIDLEDRAEELLIGFDPSKAS----ADKLPTPPRKKQ----------------- 338
R H ++ L +RA L+ P A+ + RK +
Sbjct: 524 ACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKK 583
Query: 339 ---SAINMLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEK 395
S I + ++K+ S P EVNE L+ + ++++ GYV D ++ + DE +
Sbjct: 584 PGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGE 643
Query: 396 EKA---LQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 452
L +HSE+LA+A+GL+ST L ++KNLRICGDCHNAIK MS + GRE+IVRD
Sbjct: 644 GDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRD 703
Query: 453 NKRFHHFKDGKCSCGDYW 470
N RFH FKDGKCSCGDYW
Sbjct: 704 NLRFHCFKDGKCSCGDYW 721
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E++ G D ++L L G++ H L K+ F+ V + LI Y KCG
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289
Query: 173 G---MKDARRVFDKMPERNLSSWCLMISGYTVNGR-GDDGLLVFQQMKQAGVEPDGETF 227
G M D+ +VF ++ +L W MISGY++N ++ + F+QM++ G PD +F
Sbjct: 290 GCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF 348
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 212/410 (51%), Gaps = 33/410 (8%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVADSSV----YLALLKLCEDSGSLESGKRVHEFL 149
S N L C QA +L+ + V + +LL + GS+ G+++H +
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
K + V N LI MY KCG + A RVF+ M RN+ SW MI+G+ +G L
Sbjct: 501 VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL 560
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINI 268
F QM + GV+P+ T+ G+ HF SM E + I P EHY ++++
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDL 620
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA- 327
L AG L +A EF+ MP + V +W+ R+H + +L A ++ DP++ +A
Sbjct: 621 LCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAY 680
Query: 328 ---DKLPTPPRKKQSAINM---LEEKNRVAEYRCSI-----------------PYKEEVN 364
+ K + + M ++E+N V E CS P ++
Sbjct: 681 IQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIY 740
Query: 365 EKLKGLSGQLREAGYVPDTRYVLHDIDEEEKE----KALQYHSERLAIAYGLISTPPRTT 420
++L L +++ GYVPDT VLH ++EE E + L HSE++A+A+GLIST
Sbjct: 741 DELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRP 800
Query: 421 LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
+R+ KNLR+CGDCHNA+K +S + GRE+++RD RFHHFKDGKCSC DYW
Sbjct: 801 VRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 112 LELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKC 171
L+++ G +D ++ C + +L GK++H + +S +VE + L+ MY KC
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKC 315
Query: 172 ---GGMKDARRVFDKMPERNLSSWCLMISGYTVN-GRGDDGLLVFQQM-KQAGVEPDGET 226
G + D R+VFD+M + ++ SW +I+GY N + + +F +M Q VEP+ T
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 227 F 227
F
Sbjct: 376 F 376
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 111 ALELMGHGAV--ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMY 168
AL+LM + DS + +LLK C + GK VH L + + + N LI +Y
Sbjct: 48 ALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLY 107
Query: 169 GKCGGMKDARRVFDKM---PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
K G A VF+ M +R++ SW M++ Y NGR D + VF + + G+ P+
Sbjct: 108 SKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 112 LELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSS-FNGEVEVNNRLIGMYGK 170
+E + G V + Y A+++ C +S + G+ FL K+ F +V V LI M+ K
Sbjct: 155 VEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 171 C-GGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
++A +VFDKM E N+ +W LMI+ G + + F M +G E D T
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTL 272
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 218/406 (53%), Gaps = 31/406 (7%)
Query: 96 NADLMSLCEEGKLNQAL----ELMGHGAVADSSVYL-ALLKLCEDSGSLESGKRVHEFLK 150
NA + + + GK N+AL EL + + + L + L C G+LE G+ +H ++K
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 151 KSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLL 210
K V + LI MY KCG ++ +R VF+ + +R++ W MI G ++G G++ +
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 211 VFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINIL 269
+F +M++A V+P+G TF F M+ YGI P +HY ++++L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 270 GNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADK 329
G +G L +A +F+E MP+ +W AL +IH +++L + A L+ +P A
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 330 LPT---------------------PPRKKQSAINMLEEKNRVAEYRC---SIPYKEEVNE 365
L + KK+ + +E + E+ + P E+V
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 366 KLKGLSGQLREAGYVPDTRYVLHDIDEEE-KEKALQYHSERLAIAYGLISTPPRTTLRII 424
KL + +L+ GY P+ VL I+EEE KE++L HSE+LAI YGLIST +R+I
Sbjct: 633 KLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVI 692
Query: 425 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
KNLR+CGDCH+ K++S++ RE+IVRD RFHHF++G+CSC D+W
Sbjct: 693 KNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 94 SSNADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N+ + ++G ++ALEL A + +L C +LE G++V ++
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+++ N + + N ++ MY KCG ++DA+R+FD M E++ +W M+ GY ++ +
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 318
Query: 210 LVFQQMKQAGV 220
V M Q +
Sbjct: 319 EVLNSMPQKDI 329
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
L+K + SL G+ +H KS+ +V V N LI Y CG + A +VF + E++
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ SW MI+G+ G D L +F++M+ V+ T
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 201/359 (55%), Gaps = 25/359 (6%)
Query: 137 GSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMI 196
GSLE G+ +H + + S + + + LI MY KCG ++ A VF+++P N+ +W MI
Sbjct: 288 GSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMI 347
Query: 197 SGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEY-GI 255
+G+ ++G+ D + F +M+QAGV P + G +F M G+
Sbjct: 348 NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGL 407
Query: 256 APCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEE 315
P EHY ++++LG +G L+EAEEF+ MP++ IW+AL R+ G++++ R
Sbjct: 408 EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVAN 467
Query: 316 LLIGFDPSKASAD---------------------KLPTPPRKKQSAINMLEEKNRVAEYR 354
+L+ P + A ++ +K ++++ + E+
Sbjct: 468 ILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFV 527
Query: 355 C---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYG 411
S P +E+N L +S +LR AGY P T VL +++EE+KE L YHSE++A A+G
Sbjct: 528 VEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFG 587
Query: 412 LISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
LIST P +RI+KNLRIC DCH++IK++SK+ R++ VRD KRFHHF+DG CSC DYW
Sbjct: 588 LISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 48/226 (21%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDAR------- 178
+ ++LK C +G ++ GK++H K F G+ V + L+ MY CG MKDAR
Sbjct: 131 FPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNI 190
Query: 179 --------------------------------------RVFDKMPERNLSSWCLMISGYT 200
+FDKM +R++ SW MISGY+
Sbjct: 191 IEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS 250
Query: 201 VNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXG-FMHFESMKEYGIAPCR 259
+NG D + VF++MK+ + P+ T G ++H + ++ GI
Sbjct: 251 LNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA-EDSGIRIDD 309
Query: 260 EHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
+I++ G + +A E++P E V W A+ N IHG
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHG 354
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 207/374 (55%), Gaps = 25/374 (6%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
+S +++L+ C +LE GK +H ++ + + + V + L+ MYG+CG ++ +RVF
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
D+M +R++ SW +IS Y V+G G + +F++M G P TF
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 242 XGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNF 300
G FE+M +++GI P EHY ++++LG A +L+EA + V+ M E G +W +L
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 301 ARIHGDIDLEDRAEELLIGFDPSKASADKLPTPPRKKQSAINMLEEKNRVAEY------- 353
RIHG+++L +RA L +P A L + + ++ ++ E+
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 354 -RCSI----------------PYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKE 396
RC + P E+++ L L+ ++E GY+P T+ VL++++ EEKE
Sbjct: 524 GRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKE 583
Query: 397 KALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 456
+ + HSE+LA+A+GLI+T +RI KNLR+C DCH K +SK + +E++VRD RF
Sbjct: 584 RIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRF 643
Query: 457 HHFKDGKCSCGDYW 470
H FK+G CSCGDYW
Sbjct: 644 HRFKNGVCSCGDYW 657
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 55 RSAHKAPHLQKANNNTSIEPKLKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALEL 114
RS K P A NN SI A S+N + SLC+EGKL QA+ +
Sbjct: 22 RSPLKPPSCSVALNNPSI-------------SSGAGAKISNNQLIQSLCKEGKLKQAIRV 68
Query: 115 MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGM 174
+ + Y L+ C SL RVH + + + + + +LIGMY G +
Sbjct: 69 LSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSV 128
Query: 175 KDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
AR+VFDK +R + W + T+ G G++ L ++ +M + GVE D T+
Sbjct: 129 DYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 21/218 (9%)
Query: 108 LNQALELMGHG--------------AVADSSVYLALLKLCEDS----GSLESGKRVHEFL 149
L +AL L GHG +D Y +LK C S L GK +H L
Sbjct: 149 LFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL 208
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+ ++ V + L+ MY + G + A VF MP RN+ SW MI+ Y NG+ + L
Sbjct: 209 TRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEAL 268
Query: 210 LVFQQMKQAGVE--PDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVIN 267
F++M + + P+ T G + + G+ ++
Sbjct: 269 RTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVT 328
Query: 268 ILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
+ G G+L + ++M + V W +L + +HG
Sbjct: 329 MYGRCGKLEVGQRVFDRMH-DRDVVSWNSLISSYGVHG 365
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 213/404 (52%), Gaps = 29/404 (7%)
Query: 96 NADLMSLCEEGKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
NA + + G+ +AL + G + +++L C G+L+ G+ H ++++
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIER 268
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
+ V + L+ +Y KCG M+ A VF M E+N+ +W ++G +NG G+ L +
Sbjct: 269 NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLEL 328
Query: 212 FQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILG 270
F MKQ GV P+ TF G HF+SM+ E+GI P EHY ++++
Sbjct: 329 FSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYA 388
Query: 271 NAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA--- 327
AG+L +A +++MP++ +W +L + +R++ +++L A + ++ + + A
Sbjct: 389 RAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVL 448
Query: 328 ------------------DKLPTPPRKKQSAINMLEEKNRVAEYRC---SIPYKEEVNEK 366
+ + +KQ +++E V E+ S P +++
Sbjct: 449 LSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAV 508
Query: 367 LKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKN 426
K +S +LR AGY DT V+ DIDEEEKE AL HSE+ AIA+G++S +RI+KN
Sbjct: 509 WKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKN 568
Query: 427 LRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
LR+CGDCH ++SKI RE+IVRD RFHHFKDG CSC +W
Sbjct: 569 LRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D V L+ L + G L+S +V + F ++ +CG + AR++F
Sbjct: 142 DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF----VCRTAMVTACARCGDVVFARKLF 197
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
+ MPER+ +W MISGY G + L VF M+ GV+ +G
Sbjct: 198 EGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNG 240
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 201/379 (53%), Gaps = 30/379 (7%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D+ ++L C D+ +L GK++H ++++ + + N LI MY KCG ++ AR VF
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
+ M R++ SW MIS Y +GRG D + +F +++ +G+ PD F
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 242 XGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNF 300
G F+ M + Y I P EH ++++LG AG++ EA F++ M +E +W AL
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 301 ARIHGDIDLEDRAEELLIGFDPSKASADKLPTPPRKK-------QSAINMLEEK------ 347
R+H D D+ A + L P ++ L + K + N+++ K
Sbjct: 488 CRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNP 547
Query: 348 -------NRVAEYRC----SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKE 396
NR+ S P +E+ +L L +++E GYVPD+ LHD++EE+KE
Sbjct: 548 GASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKE 607
Query: 397 KALQYHSERLAIAYGLISTP-----PRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 451
L HSE+LAI + L++T T+RI KNLRICGDCH A K++S+I RE+I+R
Sbjct: 608 THLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIR 667
Query: 452 DNKRFHHFKDGKCSCGDYW 470
D RFH F+ G CSCGDYW
Sbjct: 668 DTNRFHVFRFGVCSCGDYW 686
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + +LK C SG++ G+++H K + + V N L+ MYGKCG + +AR V
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
D+M R++ SW ++ GY N R DD L V ++M+ + D T
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTM 244
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 208/367 (56%), Gaps = 26/367 (7%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
L C S++ G +VH K++ +V V+N LI MY KCG +K A+ VF++M ++
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFES 249
+SW +ISGY+ +G G L + MK +P+G TF G FES
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFES 575
Query: 250 M-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRN--------- 299
M +++GI PC EHY ++ +LG +GQL++A + +E +P E V IW+A+ +
Sbjct: 576 MIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEE 635
Query: 300 FARIHGD----IDLEDRAEELLIG--FDPSKASAD------KLPTPPRKKQSAINMLEEK 347
FAR + I+ +D A +L+ + +K A+ + KK+ ++ +E +
Sbjct: 636 FARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQ 695
Query: 348 NRVAEYRCSI---PYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSE 404
V + + P + +N L+ L+ + AGYVPD VL D+D+EEK+K L HSE
Sbjct: 696 GDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSE 755
Query: 405 RLAIAYGLISTPP-RTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGK 463
RLA+AYGL+ P R + I+KNLRIC DCH+A+K++S IV R+L++RD RFHHF G
Sbjct: 756 RLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGV 815
Query: 464 CSCGDYW 470
CSCGD+W
Sbjct: 816 CSCGDHW 822
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 104 EEGKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE 159
E G +L+L+ G + ++ + LK G+ + K VH + K+ + +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
V L+ +Y + G M DA +VF++MP+ ++ W MI+ + NG ++ + +F +M++A
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 220 VEPDGETF 227
V P+ T
Sbjct: 344 VVPNEFTL 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
V+ + LKL E +H + K ++ V LI Y CG + AR VF+ +
Sbjct: 148 VFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI 207
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+++ W ++S Y NG +D L + M+ AG P+ TF
Sbjct: 208 LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 102 LCEEGKLNQALEL---MGHGAVADSSVYLA-LLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
C+ G N+A++L M V + L+ +L C G+++H + K F+ +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
+ V+N LI +Y KC M A ++F ++ +N SW +I GY G G +F++ +
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 218 AGVEPDGETF 227
V TF
Sbjct: 443 NQVSVTEVTF 452
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 204/378 (53%), Gaps = 27/378 (7%)
Query: 120 VADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR 179
+ D V +++ C + + +G++VH + F+ V ++N LI MY KC + A+
Sbjct: 235 ILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKD 294
Query: 180 VFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXX 239
+F +M R++ SW +I G +G+ + L ++ M GV+P+ TF
Sbjct: 295 IFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGF 354
Query: 240 XXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALR 298
G F+SM K+YGI P +HY ++++LG +G L+EAE + MP W AL
Sbjct: 355 VEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALL 414
Query: 299 NFARIHGDIDLEDR-AEELLIGF---DPSK--------ASAD---KLPTPPRK------- 336
+ + G + R A+ L+ F DPS ASA K+ RK
Sbjct: 415 SACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVR 474
Query: 337 ---KQSAINMLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLR-EAGYVPDTRYVLHDIDE 392
S++ + +E S P KE++ LK L ++R GYVPDT ++LHD+DE
Sbjct: 475 KDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDE 534
Query: 393 EEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 452
+EKEK L +HSER A+AYGL+ P T +RI+KNLR+CGDCH +K +S+I RE+IVRD
Sbjct: 535 QEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRD 594
Query: 453 NKRFHHFKDGKCSCGDYW 470
R+HHFK GKCSC D+W
Sbjct: 595 ATRYHHFKGGKCSCNDFW 612
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D V+ AL+K C + GS++ G++VH S + + V + L+ MY KCG + A+ VF
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
D + +N SW M+SGY +GR ++ L +F+ +
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL 197
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
YL L+LC + +L + K +H + K + N L+ +YGKCG A +VFD+MP
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 186 ERNLSSWCLMISG 198
R+ +W +++
Sbjct: 66 HRDHIAWASVLTA 78
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 200/389 (51%), Gaps = 31/389 (7%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G D +++ C + G L+ K VH + + E+ +NN LI MY KCG
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
G+ R VF+KMP RN+ SW MI+ +++G D L +F +MKQ VEP+ TF
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 233 XXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
G F SM EY I P EHY ++++ G A L EA E +E MP+ V
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNV 513
Query: 292 DIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKLPTPPRKKQSAI-------NML 344
IW +L + RIHG+++L A + ++ +P A L + ++ ++
Sbjct: 514 VIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVM 573
Query: 345 EEKNRVAEYRCSI-----------------PYKEEVNEKLKGLSGQLREAGYVPDTRYVL 387
EEKN E S E+ KL + +L+ AGYVPD VL
Sbjct: 574 EEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVL 633
Query: 388 HDIDEEEKEKALQYHSERLAIAYGLISTPPRT------TLRIIKNLRICGDCHNAIKIMS 441
D++EEEK+ + +HSE+LA+ +GL++ +RI+KNLR+C DCH K++S
Sbjct: 634 VDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVS 693
Query: 442 KIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
K+ RE+IVRD RFH +K+G CSC DYW
Sbjct: 694 KVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 103 CEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEV 158
C G +++A +L + D + ++ C +G++ + ++EFL ++ +
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT 247
Query: 159 EVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQA 218
+ L+ MY G M AR F KM RNL M+SGY+ GR DD ++F Q ++
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEK- 306
Query: 219 GVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEA 278
D + FE M GI P VI+ N G L++A
Sbjct: 307 ---KDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
Query: 279 E 279
+
Sbjct: 364 K 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 68/170 (40%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G D +L +LK +L G +H K + + V + MY CG + A
Sbjct: 106 GGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYA 165
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
R VFD+M R++ +W MI Y G D+ +F++MK + V PD
Sbjct: 166 RNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRT 225
Query: 238 XXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPL 287
+E + E + ++ + AG ++ A EF KM +
Sbjct: 226 GNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 203/366 (55%), Gaps = 25/366 (6%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
+K ++ +++ GK+VH + K+ ++ E EV N LI MY KCG + DA + F ++ +N
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFES 249
SW +I+ Y+ +G G + L F QM + V P+ T G +FES
Sbjct: 759 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFES 818
Query: 250 M-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDID 308
M EYG++P EHY+ V+++L AG L+ A+EF+++MP++ +W+ L + +H +++
Sbjct: 819 MNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNME 878
Query: 309 L-------------EDRAEELLIG--------FDPSKASADKLPTPPRKKQSAINMLEEK 347
+ ED A +L+ +D + K+ KK+ + +E K
Sbjct: 879 IGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVK 938
Query: 348 NRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSE 404
N + + + P +E++E + L+ + E GYV D +L+++ E+K+ + HSE
Sbjct: 939 NSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSE 998
Query: 405 RLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKC 464
+LAI++GL+S P + ++KNLR+C DCH IK +SK+ RE+IVRD RFHHF+ G C
Sbjct: 999 KLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGAC 1058
Query: 465 SCGDYW 470
SC DYW
Sbjct: 1059 SCKDYW 1064
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 120 VADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR 179
V + Y ++LK C G LE G+++H + K++F V + LI MY K G + A
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWD 546
Query: 180 VFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+ + +++ SW MI+GYT D L F+QM G+ D
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%)
Query: 103 CEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNN 162
CE + ++ G + + ++L C+ SLE G+++H + K F+ + V N
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 163 RLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEP 222
L+ +Y G + A +F M +R+ ++ +I+G + G G+ + +F++M G+EP
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 223 DGETF 227
D T
Sbjct: 388 DSNTL 392
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 133 CEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSW 192
C +L+ G+++H S F+ ++ N L+ +Y +CG ++++ F++ + +W
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAW 660
Query: 193 CLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE 252
++SG+ +G ++ L VF +M + G++ + TF G + +
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 253 YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
G E +I++ G +++AE+ ++ + V W A+ N HG
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHG 772
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 92 ASSSNADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHE 147
A + N + L + G +A+EL G DS+ +L+ C G+L G+++H
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 148 FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
+ K F ++ L+ +Y KC ++ A F + N+ W +M+ Y + +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 208 GLLVFQQMKQAGVEPDGETF 227
+F+QM+ + P+ T+
Sbjct: 474 SFRIFRQMQIEEIVPNQYTY 493
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 194/374 (51%), Gaps = 25/374 (6%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D +L C + + G+ +H ++ ++ + + V N L+ MY KCG + A +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
D + ++L SW +MI+GY ++G G + + +F QM+QAG+E D +F
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 242 XGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNF 300
G+ F M+ E I P EHY ++++L G L +A F+E MP+ IW AL
Sbjct: 618 EGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Query: 301 ARIHGDIDLEDRAEELLIGFDPSK-----------ASADKLPTPPR----------KKQS 339
RIH D+ L ++ E + +P A A+K R +K
Sbjct: 678 CRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNP 737
Query: 340 AINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKE 396
+ +E K RV + S P E + L+ + ++ E GY P T+Y L D +E EKE
Sbjct: 738 GCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKE 797
Query: 397 KALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 456
+AL HSE+LA+A G+IS+ +R+ KNLR+CGDCH K MSK+ RE+++RD+ RF
Sbjct: 798 EALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRF 857
Query: 457 HHFKDGKCSCGDYW 470
H FKDG CSC +W
Sbjct: 858 HQFKDGHCSCRGFW 871
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%)
Query: 106 GKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLI 165
G + ++M G DS + + K S+ G+++H F+ KS F V N L+
Sbjct: 178 GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLV 237
Query: 166 GMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGE 225
Y K + AR+VFD+M ER++ SW +I+GY NG + GL VF QM +G+E D
Sbjct: 238 AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 297
Query: 226 T 226
T
Sbjct: 298 T 298
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 21/184 (11%)
Query: 61 PHLQKANNNTSIEPKLKLDQSVHQNQD------------TPF--AASSSNADLMSLCEEG 106
PHLQ N I +++ + V N+ T F + + +N L CE G
Sbjct: 19 PHLQ---NQKEIRSGVRVRKYVIFNRASLRTVSDCVDSITTFDRSVTDANTQLRRFCESG 75
Query: 107 KLNQALELM---GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNR 163
L A++L+ G + D ++L+LC DS SL+ GK V F++ + F + + ++
Sbjct: 76 NLENAVKLLCVSGKWDI-DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSK 134
Query: 164 LIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
L MY CG +K+A RVFD++ W ++++ +G + +F++M +GVE D
Sbjct: 135 LSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMD 194
Query: 224 GETF 227
TF
Sbjct: 195 SYTF 198
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 102 LCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVN 161
L E+G L+ ++++ G D + +++ C DS + G+ VH K+ F+ E
Sbjct: 276 LAEKG-LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
N L+ MY KCG + A+ VF +M +R++ S+ MI+GY G + + +F++M++ G+
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 222 PDGET 226
PD T
Sbjct: 395 PDVYT 399
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G D A+L C L+ GKRVHE++K++ ++ V+N L+ MY KCG
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQ-QMKQAGVEPDGET 226
M++A VF +M +++ SW +I GY+ N ++ L +F +++ PD T
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 214/406 (52%), Gaps = 31/406 (7%)
Query: 96 NADLMSLCEEGKLNQALEL---MGHGAVA-DSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
NA L + G ALE M AV DS +++L C GSLE G+ +++ +K
Sbjct: 179 NAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK 238
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
+ + V N + M+ KCG + AR +F++M +RN+ SW MI GY +NG + L +
Sbjct: 239 EEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTL 298
Query: 212 FQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM---KEYGIAPCREHYLEVINI 268
F M+ G+ P+ TF G +F M + + P +EHY ++++
Sbjct: 299 FTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDL 358
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKAS-- 326
LG +G L EA EF++KMP+E IW AL +H D+ L + ++L+ P S
Sbjct: 359 LGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYH 418
Query: 327 ---------------ADKLPTPPRK----KQSAINMLEEKNRVAEYR---CSIPYKEEVN 364
DK+ + RK K +A + +E + ++ + S P + +
Sbjct: 419 VLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIY 478
Query: 365 EKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRII 424
EKL + ++R+ GYVPDT V HD++ EEKE +L +HSE+LAIA+GLI P +R++
Sbjct: 479 EKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVM 538
Query: 425 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
KNLR C DCH K +S + E+I+RD RFHHF++G CSC ++W
Sbjct: 539 KNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 143 KRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVN 202
K++H + ++ F+ + + +L+ G M AR+VFD+M + + W + GY N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 203 GRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHY 262
+ LL++++M+ GV PD T+ GF + +YG
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 263 LEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
E++ + G+L+ AE E M ++ + W A
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAF 181
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 203/378 (53%), Gaps = 26/378 (6%)
Query: 119 AVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDAR 178
V D + +L L +C + GK +H L + + E+++ N LI MY KCG ++++
Sbjct: 505 VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSS 564
Query: 179 RVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXX 238
RVF++M R++ +W MI Y + G G+ L F M+++G+ PD F
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624
Query: 239 XXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
G FE MK Y I P EHY V+++L + ++++AEEF++ MP++ IW ++
Sbjct: 625 LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASV 684
Query: 298 RNFARIHGDIDLEDRAEELLIGFDP---------SKASA-----DKLPTPPRK------- 336
R GD++ +R +I +P S A A DK+ +
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHIT 744
Query: 337 KQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEE 393
K + +E V + S P E + + L+ L + + GY+PD R V +++EE
Sbjct: 745 KNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEE 804
Query: 394 E-KEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 452
E K + + HSERLAIA+GL++T P T L+++KNLR+CGDCH K++SKIVGRE++VRD
Sbjct: 805 EEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRD 864
Query: 453 NKRFHHFKDGKCSCGDYW 470
RFH FKDG CSC D W
Sbjct: 865 ANRFHLFKDGTCSCKDRW 882
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N+ + + + G +ALE G D + +++K C E G V+E +
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
F ++ V N L+ MY + G + AR+VFD+MP R+L SW +ISGY+ +G ++ L +
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 212 FQQMKQAGVEPDGET 226
+ ++K + + PD T
Sbjct: 195 YHELKNSWIVPDSFT 209
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAV----ADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N+ + + G L +A++L + AD YL L+ + L+ GK +H
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
KS ++ V+N LI MY KCG + D+ ++F M + +W +IS G GL
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 210 LVFQQMKQAGVEPDGETF 227
V QM+++ V PD TF
Sbjct: 495 QVTTQMRKSEVVPDMATF 512
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
++L+ C L K ++ ++ K+ F E V N LI +Y KCG M AR VF+ M +
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ SW +ISGY +G + + +F+ M + D T+
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 201/379 (53%), Gaps = 26/379 (6%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G VA+ +V ++++ C G+LE G+R +E++ KS + + L+ M+ +CG ++ A
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
VF+ +PE + SW +I G V+G + F QM G P TF
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHG 363
Query: 238 XXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQA 296
G +E+MK ++GI P EHY ++++LG AG+L EAE F+ KM ++ I A
Sbjct: 364 GLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGA 423
Query: 297 LRNFARIHGDIDLEDRAEELLIGFDPSKASA---------------------DKLPTPPR 335
L +I+ + ++ +R +LI P + D +
Sbjct: 424 LLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLV 483
Query: 336 KKQSAINMLEEKNRVAEYRCS----IPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDID 391
KK +++E ++ ++ P ++ K + + G++R GY +T D+D
Sbjct: 484 KKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVD 543
Query: 392 EEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 451
EEEKE ++ HSE+LAIAYG++ T P TT+RI+KNLR+C DCH K++S++ GRELIVR
Sbjct: 544 EEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVR 603
Query: 452 DNKRFHHFKDGKCSCGDYW 470
D RFHHF++G CSC DYW
Sbjct: 604 DRNRFHHFRNGVCSCRDYW 622
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 31/130 (23%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYG------------ 169
D+ + L+K + + G++ H + + F +V V N L+ MY
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175
Query: 170 -------------------KCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLL 210
KCG +++AR +FD+MP RNL +W +MI+GY N + +
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAID 235
Query: 211 VFQQMKQAGV 220
+F+ MK+ GV
Sbjct: 236 LFEFMKREGV 245
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/408 (34%), Positives = 208/408 (50%), Gaps = 31/408 (7%)
Query: 94 SSNADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S A + + G +ALE+ G + Y +LL L+ GK+ H +
Sbjct: 221 SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV 280
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+ + N LI MY KCG + ARR+FD MPER SW M+ GY+ +G G + L
Sbjct: 281 LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVL 340
Query: 210 LVFQQMK-QAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM--KEYGIAPCREHYLEVI 266
+F+ M+ + V+PD T G F+ M EYG P EHY ++
Sbjct: 341 ELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIV 400
Query: 267 NILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKAS 326
++LG AG+++EA EF+++MP + + +L R+H +D+ + LI +P A
Sbjct: 401 DMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAG 460
Query: 327 ---------------ADKLPTPPRKKQSAI------NMLEEKNRVAEYRC---SIPYKEE 362
AD Q A+ + ++ + + + + P +EE
Sbjct: 461 NYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREE 520
Query: 363 VNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR 422
V K+K +S ++++AGYVPD VL+D+DEE+KEK L HSE+LA+ +GLI+T +R
Sbjct: 521 VLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIR 580
Query: 423 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
+ KNLRIC DCHN KI SK+ RE+ +RD RFH DG CSCGDYW
Sbjct: 581 VFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 22/238 (9%)
Query: 90 FAASSSNADLMS------LCEEGKLNQAL-ELMGHGAVADSSVYLALLKLCEDSGSLESG 142
F++S +N L + LC G+L +AL E+ G Y ALL C D +L G
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDG 71
Query: 143 KRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVN 202
+RVH + K+ + + RL+ YGKC ++DAR+V D+MPE+N+ SW MIS Y+
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 203 GRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHY 262
G + L VF +M ++ +P+ TF G + ++
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG 191
Query: 263 LEVINILGNAGQLNEAEEFVEKMP--------------LELGVDIWQALRNFARIHGD 306
++++ AGQ+ EA E E +P +LG+D +AL F R+H +
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD-EEALEMFHRLHSE 248
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 63/115 (54%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+M + + +L C + L GK++H + K +++ + V + L+ MY K G
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 202
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+K+AR +F+ +PER++ S +I+GY G ++ L +F ++ G+ P+ T+
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTY 257
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 202/370 (54%), Gaps = 27/370 (7%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM-PE 186
+L C G+LE GK VH ++ K ++ + LI MY KCG ++ A+RVF+ + +
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQA-GVEPDGETFXXXXXXXXXXXXXXXGFM 245
+++ ++ MI + G D+ +F +M + + P+ TF G
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 246 HFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIH 304
+F+ M +E+GI P +HY ++++ G +G + EAE F+ MP+E V IW +L + +R+
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 305 GDIDLEDRAEELLIGFDPSKASADKLPTPPRKKQS---------------------AINM 343
GDI + A + LI DP + A L + K +
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 344 LEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQ 400
+E + V E+ S E + L + +LREAGYV DT+ VL D++E++KE AL
Sbjct: 444 VEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALS 503
Query: 401 YHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFK 460
YHSE+LAIA+ L+ T P T +RIIKNLRICGDCH +K++SK+ RE++VRD RFHHF+
Sbjct: 504 YHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFR 563
Query: 461 DGKCSCGDYW 470
DG CSC D+W
Sbjct: 564 DGSCSCRDFW 573
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
+++ G D V +LL + G L S +RV + S + ++ N ++ Y K G
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFD----DSGSKDLPAWNSVVNAYAKAG 142
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMK-----QAGVEPDGET 226
+ DAR++FD+MPERN+ SW +I+GY + G+ + L +F++M+ +A V P+ T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 199/382 (52%), Gaps = 29/382 (7%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G D ++++ LE K+ H L ++ F E+ N L+ Y K G + A
Sbjct: 320 GVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTA 379
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
R VFDK+P +N+ SW ++ GY +GRG D + +F++M A V P+ TF
Sbjct: 380 RYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYS 439
Query: 238 XXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQA 296
G+ F SM E +GI P HY +I +LG G L+EA F+ + PL+ V++W A
Sbjct: 440 GLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAA 499
Query: 297 LRNFARIHGDIDLEDRAEELLIGFDPSKA------------------SADKLPTPPRKKQ 338
L N R+ +++L E L G P K +A L T K
Sbjct: 500 LLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGL 559
Query: 339 S---AINMLEEKNRVAEYRCSIPY-------KEEVNEKLKGLSGQLREAGYVPDTRYVLH 388
S A +E ++ + + K ++ +K+ L ++ E GY + +++L
Sbjct: 560 SMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLP 619
Query: 389 DIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGREL 448
D+DE+E+E+ +YHSE+LAIAYGL++TP L+I +N RIC +CH ++ +S + GRE+
Sbjct: 620 DVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREM 679
Query: 449 IVRDNKRFHHFKDGKCSCGDYW 470
+VRD RFHHFK+GKCSCG YW
Sbjct: 680 VVRDASRFHHFKEGKCSCGGYW 701
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 72 IEPKLKLDQSVHQNQDTPFAAS-SSNADLMSLC----EEGKLNQALELMGHGAVADSSVY 126
IE K DQ + Q + + S + + LC E +L + LE+ V S+ Y
Sbjct: 68 IEVKESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVST-Y 126
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
AL++ C S+ KRV+ F+ + F E + NR++ M+ KCG + DARR+FD++PE
Sbjct: 127 DALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPE 186
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
RNL S+ +ISG+ G + +F+ M + + + TF
Sbjct: 187 RNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTF 227
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 121 ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
++ + +L+ GS+ GK++H K V+ LI MY KCG ++DAR
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
F+ MPE+ +W +I+GY ++G ++ L + M+ +GV D T
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTL 328
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 200/374 (53%), Gaps = 26/374 (6%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
+ S + + L C G+L+ GK +H K + V N L+ MY G + DA VF
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF 384
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
K+ ++++ SW +I G +GRG ++F QM + EPD TF
Sbjct: 385 IKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLE 444
Query: 242 XGFMHFESMKEYGIAPCR---EHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALR 298
G F M GI +HY +++ILG G+L EAEE +E+M ++ +W AL
Sbjct: 445 KGRKLFYYMSS-GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALL 503
Query: 299 NFARIHGDIDLEDRAEELLIGFDPSKASADKLPT---PPRKKQSAINMLE---EKNRVAE 352
+ R+H D+D ++A + D ++A L + + S ++ L +KN + +
Sbjct: 504 SACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMK 563
Query: 353 ----------------YRCSIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKE 396
+ P+ + EKL+ L +L+E GY PD R LHD+++E+KE
Sbjct: 564 KPGSSWVVIRGKKHEFFSGDQPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKE 623
Query: 397 KALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 456
+ L YHSERLAIA+GLI+T + + ++KNLR+C DCH IK++S +VGRE+++RD RF
Sbjct: 624 EMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRF 683
Query: 457 HHFKDGKCSCGDYW 470
HHFK+G CSCGDYW
Sbjct: 684 HHFKNGTCSCGDYW 697
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+ ++ C ++ + G +VH + K F E V+ LI Y C + D+R+VFD+
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
++ W ++SGY++N + +D L +F M + + P+ TF
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTF 329
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 194/364 (53%), Gaps = 26/364 (7%)
Query: 133 CEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSW 192
C SL G+ H + K + + LI MY K G + + +VF+ + E++ +SW
Sbjct: 607 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 666
Query: 193 CLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE 252
MI GY ++G + + +F++M++ G PD TF G + + MK
Sbjct: 667 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 726
Query: 253 -YGIAPCREHYLEVINILGNAGQLNEAEEFV-EKMPLELGVDIWQALRNFARIHGDIDLE 310
+G+ P +HY VI++LG AGQL++A V E+M E V IW++L + RIH ++++
Sbjct: 727 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG 786
Query: 311 DRAEELLIGFDPSKAS---------------------ADKLPTPPRKKQSAINMLEEKNR 349
++ L +P K ++ +K + + +E +
Sbjct: 787 EKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRK 846
Query: 350 VAEYRCSIPYK---EEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERL 406
V + + EE+ L ++ + GY PDT V HD+ EEEK + L+ HSE+L
Sbjct: 847 VFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKL 906
Query: 407 AIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC 466
A+ YGLI T TT+R+ KNLRIC DCHNA K++SK++ RE++VRDNKRFHHFK+G CSC
Sbjct: 907 ALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSC 966
Query: 467 GDYW 470
GDYW
Sbjct: 967 GDYW 970
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%)
Query: 108 LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGM 167
L+ L++ G + DS +LL C SL GK VH F+ ++ ++ V ++ +
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 168 YGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
Y CG + + +FD M +++L SW +I+GY NG D L VF+QM G++ G
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D Y ++K C + G VH + K+ +V V N L+ YG G + DA ++F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
D MPERNL SW MI ++ NG ++ L+ +M +
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 281
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 108 LNQALELMGHGA-VADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIG 166
L + +E G GA + D + + +L +C + GK VH + K + E+ +NN L+
Sbjct: 276 LGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMD 335
Query: 167 MYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
MY KCG + +A+ +F +N+ SW M+ G++ G V +QM G
Sbjct: 336 MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 101 SLCEEGKLNQAL----ELMGHGAVADSSVYL---ALLKLCEDSG---SLESGKRVHEFLK 150
+ CE G L+++ E +G + + L AL L + SG +E G+++H+ +
Sbjct: 52 NFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVS 111
Query: 151 KSS-FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
S+ + + R+I MY CG D+R VFD + +NL W +IS Y+ N D+ L
Sbjct: 112 GSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVL 171
Query: 210 LVFQQM-KQAGVEPDGETF 227
F +M + PD T+
Sbjct: 172 ETFIEMISTTDLLPDHFTY 190
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%)
Query: 116 GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMK 175
G AD L + +C L S K +H + K F V N + Y KCG +
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 176 DARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
A+RVF + + ++SW +I G+ + L QMK +G+ PD T
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 498
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/408 (34%), Positives = 217/408 (53%), Gaps = 31/408 (7%)
Query: 94 SSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S + ++ + G N++ EL G + +L C SGS E GK +H F+
Sbjct: 236 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 295
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE-RNLSSWCLMISGYTVNGRGDDG 208
+K+ ++ V VNN LI MY +CG + AR VF+ M E R + SW MI+G ++G+G++
Sbjct: 296 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
Query: 209 LLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVIN 267
+ +F +M GV PDG +F G +F MK Y I P EHY +++
Sbjct: 356 VRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 268 ILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP----- 322
+ G +G+L +A +F+ +MP+ +W+ L HG+I+L ++ ++ L DP
Sbjct: 416 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 475
Query: 323 ------SKASADK----------LPTPPRKKQSAINMLEEKNRVAEYRCSIPYKE---EV 363
+ A+A K + KK +A +++E + ++ K E
Sbjct: 476 LVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEA 535
Query: 364 NEKLKGLSGQLR-EAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR 422
+EKLK + +L+ EAGY P+ L+D++EEEKE + HSE+LA+A+ L +R
Sbjct: 536 HEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIR 595
Query: 423 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
I+KNLRIC DCH +K+ SK+ G E++VRD RFH FKDG CSC DYW
Sbjct: 596 IVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 112 LELMGHGAV-ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGK 170
+E+M G V DS + ++K E+ SL +G ++H K + V LIGMYG
Sbjct: 94 VEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGG 153
Query: 171 CGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
CG ++ AR+VFD+M + NL +W +I T RG+D
Sbjct: 154 CGCVEFARKVFDEMHQPNLVAWNAVI---TACFRGND 187
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
N ++ Y K G ++ A+R+F +MP R+ SW MI G NG ++ L F+++++AG+
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 222 PD 223
P+
Sbjct: 267 PN 268
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 209/385 (54%), Gaps = 27/385 (7%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK--SSFNGEVEVNNRLIGMYGK 170
E++ G + L++L C G+++ G+ +H ++ K + LI MY K
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 416
Query: 171 CGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXX 230
CG ++ A +VF+ + ++LSSW MI G+ ++GR D +F +M++ G++PD TF
Sbjct: 417 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGL 476
Query: 231 XXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLEL 289
G F +M ++Y + P EHY +I++LG++G EAEE + M +E
Sbjct: 477 LSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEP 536
Query: 290 GVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSK-----------ASADK--------- 329
IW +L ++HG+++L + E LI +P ASA +
Sbjct: 537 DGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRA 596
Query: 330 -LPTPPRKKQSAINMLEEKNRVAEYRCS---IPYKEEVNEKLKGLSGQLREAGYVPDTRY 385
L KK + +E + V E+ P E+ L+ + L +AG+VPDT
Sbjct: 597 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656
Query: 386 VLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVG 445
VL +++EE KE AL++HSE+LAIA+GLIST P T L I+KNLR+C +CH A K++SKI
Sbjct: 657 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYK 716
Query: 446 RELIVRDNKRFHHFKDGKCSCGDYW 470
RE+I RD RFHHF+DG CSC DYW
Sbjct: 717 REIIARDRTRFHHFRDGVCSCNDYW 741
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Query: 94 SSNADLMSLCEEGKLNQALEL----MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S NA + E G +ALEL M D S + ++ C SGS+E G++VH ++
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
F +++ N LI +Y KCG ++ A +F+++P +++ SW +I GYT + L
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 210 LVFQQMKQAGVEPDGET 226
L+FQ+M ++G P+ T
Sbjct: 353 LLFQEMLRSGETPNDVT 369
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
++ G + +S + +LK C S + + G+++H + K + ++ V+ LI MY + G
Sbjct: 125 MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR 184
Query: 174 MKDARRVFDKMPERNLSS-------------------------------WCLMISGYTVN 202
++DA +VFDK P R++ S W MISGY
Sbjct: 185 LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET 244
Query: 203 GRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHY 262
G + L +F+ M + V PD T G + ++G +
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 263 LEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
+I++ G+L A E++P + V W L
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYK-DVISWNTL 338
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 205/406 (50%), Gaps = 39/406 (9%)
Query: 96 NADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
NA + + G LEL G D +++L C G+ + G V + ++
Sbjct: 226 NAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVES 285
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
+ F V V+N I MY +CG + AR VFD MP ++L SW MI Y ++G G+ GL++
Sbjct: 286 NGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLML 345
Query: 212 FQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILG 270
F M + G+ PDG F G F +MK EY + P EHY ++++LG
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLG 405
Query: 271 NAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKL 330
AG+L+EA EF+E MP+E +W AL +IH ++D+ + A +I F+P+ L
Sbjct: 406 RAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVL 465
Query: 331 PT---------------------PPRKKQSAINMLEEKNRVAEYRC---SIPYKEEVNEK 366
+ +K+ + +E K RV + S EEV+
Sbjct: 466 MSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRM 525
Query: 367 LKGLSGQLRE-AGYVPDTRYVLHDIDE-EEKEKALQYHSERLAIAYGLISTPPRTTLRII 424
L L + E AG + D D EE + HSERLAIA+G++++ P T + +I
Sbjct: 526 LDELETSVMELAGNM--------DCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVI 577
Query: 425 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
KNLR+C DCH +K +SKIV R+ +VRD RFH+FKDG CSC DYW
Sbjct: 578 KNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G DS L L+ LC L G+ +H K + EV V N I MY KCG ++
Sbjct: 151 GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
RR+FD+MP + L +W +ISGY+ NG D L +++QMK +GV PD T
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
Query: 238 XXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
G + ++ G P I++ G L +A + MP++ V W A+
Sbjct: 271 GAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVS-WTAM 329
Query: 298 RNFARIHG 305
+HG
Sbjct: 330 IGCYGMHG 337
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 82 VHQNQDTPFAASSSNADLMSLCEEGKLNQALEL----MGHGAVADSSVYLALLKLCEDSG 137
V + A++ N L L + ++++ L + G+ D+ + +LK C
Sbjct: 8 VRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLS 67
Query: 138 SLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCL--M 195
SG+++H + K E V LI MY KCG + DAR+VF++ P+ + S C +
Sbjct: 68 LPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNAL 127
Query: 196 ISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
ISGYT N + D +F++MK+ GV D T
Sbjct: 128 ISGYTANSKVTDAAYMFRRMKETGVSVDSVT 158
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 195/357 (54%), Gaps = 25/357 (7%)
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISG 198
LE G+++H K F + + N MY KCG + + ++ R+L SW ++IS
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640
Query: 199 YTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAP 257
+G ++ F +M + G++P TF G +++ + +++G+ P
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 700
Query: 258 CREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELL 317
EH + VI++LG +G+L EAE F+ KMP++ +W++L +IHG++D +A E L
Sbjct: 701 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 760
Query: 318 IGFDPSK-----ASADKLPTPPR----------------KKQSAINMLEEKNRVAEYRC- 355
+P S++ T R KK+ A + ++ K++V+ +
Sbjct: 761 SKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 820
Query: 356 --SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLI 413
+ P E+ KL+ + ++E+GYV DT L D DEE+KE L HSERLA+AY L+
Sbjct: 821 DRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALM 880
Query: 414 STPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
STP +T+RI KNLRIC DCH+ K +S+++GR +++RD RFHHF+ G CSC DYW
Sbjct: 881 STPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Query: 118 GAVADSSVYLALLKLCEDSGSL-ESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKD 176
G S V +L+ C SGS+ G +VH F+ KS +V V+ ++ +YG G +
Sbjct: 53 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 112
Query: 177 ARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
+R+VF++MP+RN+ SW ++ GY+ G ++ + +++ M+ GV
Sbjct: 113 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGV 156
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 94 SSNADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N+ + S +G+ AL L+ G + + + L C E G+ +H +
Sbjct: 329 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 388
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
S + N L+ MYGK G M ++RRV +MP R++ +W +I GY + D L
Sbjct: 389 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 448
Query: 210 LVFQQMKQAGVEPD 223
FQ M+ GV +
Sbjct: 449 AAFQTMRVEGVSSN 462
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 118 GAVADSSVYLALLKLCEDSGSL-ESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKD 176
G ++ +++L C G L E GK +H ++ + F + V N LI MY KCG +
Sbjct: 458 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 517
Query: 177 ARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
++ +F+ + RN+ +W M++ +G G++ L + +M+ GV D +F
Sbjct: 518 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSF 568
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 1/156 (0%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
G+ +H + K F+ V V N L+ MY G +A VF +MP ++L SW +++ +
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 202 NGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREH 261
+GR D L + M +G + TF G + + G+ +
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 262 YLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
++++ G G+++E+ + +MP V W AL
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNAL 434
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 196/372 (52%), Gaps = 26/372 (6%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
++ +L C D G+++H K + V V + LI MY KCG + DA + F +
Sbjct: 194 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 253
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQQM-KQAGVEPDGETFXXXXXXXXXXXXXXXG 243
+ + W MIS Y +G+GD+ + +F M +Q +E + F G
Sbjct: 254 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 313
Query: 244 FMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFAR 302
F+ M E YG P +HY V+++LG AG L++AE + MP++ + IW+ L +
Sbjct: 314 LELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACN 373
Query: 303 IHGDIDLEDRAEELLIGFDPSKAS-----ADKLPTPPR----------------KKQSAI 341
IH + ++ R + ++ DP+ ++ A+ + R KK++ I
Sbjct: 374 IHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGI 433
Query: 342 NMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKA 398
+ E K V +++ S +E+ LK L+ +++ GY PDT VLHD+DEEEKE
Sbjct: 434 SWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESD 493
Query: 399 LQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 458
L HSE+LA+A+ L+ P +RIIKNLR+C DCH A K +S I RE+ +RD RFHH
Sbjct: 494 LVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHH 553
Query: 459 FKDGKCSCGDYW 470
F +GKCSCGDYW
Sbjct: 554 FINGKCSCGDYW 565
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 137 GSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMI 196
G S V+ ++K ++ +N LI Y + G + +AR+VFD+MP+R L++W MI
Sbjct: 8 GDFPSAVAVYGRMRKKNYMS----SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 197 SGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+G ++GL +F++M G PD T
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 94
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 138 SLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMIS 197
S+ G+++H + K ++ VN+ L MY + G ++D V MP RNL +W +I
Sbjct: 106 SVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIM 165
Query: 198 GYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
G NG + L +++ MK +G P+ TF
Sbjct: 166 GNAQNGCPETVLYLYKMMKISGCRPNKITF 195
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 189/384 (49%), Gaps = 25/384 (6%)
Query: 112 LELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKC 171
L+++ D + L C G+L+ G+ + + F + + N LI MY KC
Sbjct: 302 LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 172 GGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXX 231
G M VF +M E+++ ISG NG VF Q ++ G+ PDG TF
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421
Query: 232 XXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELG 290
G F ++ Y + EHY ++++ G AG L++A + MP+
Sbjct: 422 CGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 291 VDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKAS---------------------ADK 329
+W AL + R+ D L + + LI +P A D
Sbjct: 482 AIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDM 541
Query: 330 LPTPPRKKQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYV 386
+ KK + +E + +V E+ S P +++ KL+ L ++R G+VP T +V
Sbjct: 542 MNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFV 601
Query: 387 LHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGR 446
D++EEEKE+ L YHSE+LA+A GLIST +R++KNLR+CGDCH +K++SKI R
Sbjct: 602 FFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRR 661
Query: 447 ELIVRDNKRFHHFKDGKCSCGDYW 470
E++VRDN RFH F +G CSC DYW
Sbjct: 662 EIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%)
Query: 108 LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGM 167
L+ L + HG + +LK C + S + G +H + K FN +V L+ +
Sbjct: 96 LDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSI 155
Query: 168 YGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
Y G + DA ++FD++P+R++ +W + SGYT +GR + + +F++M + GV+PD
Sbjct: 156 YSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G DS + +L C G L+SG+ + +++++ V L+ +Y KCG M+ A
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
R VFD M E+++ +W MI GY N +G+ +F QM Q ++PD
Sbjct: 267 RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 195/375 (52%), Gaps = 26/375 (6%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + +LA+L+ CED G + + +H + F+G + L+ +Y K G ++D+ VF
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
++ + +W M++ Y +G G D + F+ M G+ PD TF
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 242 XGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNF 300
G +FE+M K Y I P +HY ++++LG +G L +A +++MP+E +W AL
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Query: 301 ARIHGDIDLEDRAEELLIGFDPSKA----------SADKLPTPPRK-----------KQS 339
R++ D L +A E L +P SA L + + S
Sbjct: 414 CRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRAS 473
Query: 340 AINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLR-EAGYVPDTRYVLHDIDEEEK 395
+ +E N++ ++ S P E++ +KLK + +++ E GY T +VLHD+ E+ K
Sbjct: 474 GCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVK 533
Query: 396 EKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 455
E+ + HSE++A+A+GL+ P + I KNLRICGDCH K +S I R +I+RD+KR
Sbjct: 534 EEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKR 593
Query: 456 FHHFKDGKCSCGDYW 470
FHHF DG CSC DYW
Sbjct: 594 FHHFLDGSCSCSDYW 608
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 106 GKLNQALELMGHGAVADSS------VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE 159
G L + E++ +++ +L+++ C GS E G+ +H + K EV+
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVK 170
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
V N I YGK G + + ++F+ + +NL SW MI + NG + GL F ++ G
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG 230
Query: 220 VEPDGETF 227
EPD TF
Sbjct: 231 HEPDQATF 238
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 9/176 (5%)
Query: 117 HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKD 176
H A+ S +A +K C S+E + +H + KS + ++L+G Y + G
Sbjct: 28 HSLDANVSSLIAAVKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVC 84
Query: 177 ARRVFDKMPERNLSSWCLMISGYTVNGRGDDG----LLVFQQMKQAGVEPDGETFXXXXX 232
A ++FD+MPER+L SW +ISGY+ GRG G +L + + G P+ TF
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYS--GRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142
Query: 233 XXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLE 288
G + ++G+ + IN G G L + + E + ++
Sbjct: 143 ACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK 198
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 200/383 (52%), Gaps = 25/383 (6%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
EL+G + + +L C D + E GK+VH ++ + F+ ++ L+ MY KCG
Sbjct: 309 ELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCG 368
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
++ A+ V D P+ +L SW +I G NG+ D+ L F + ++G +PD TF
Sbjct: 369 NIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLS 428
Query: 233 XXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
G F S+ E + ++ +HY ++++L +G+ + + + +MP++
Sbjct: 429 ACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSK 488
Query: 292 DIWQALRNFARIHGDIDLEDRAEELLIGFDPSK-----------ASADK----------- 329
+W ++ +G+IDL + A + L +P A+A K
Sbjct: 489 FLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRM 548
Query: 330 --LPTPPRKKQSAINMLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLREAGYVPDTRYVL 387
+ R S + +++ S P ++ E L+ L +++E GYVP T VL
Sbjct: 549 QEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVL 608
Query: 388 HDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRE 447
HD+++E+KE+ L YHSE+LA+A+ ++ST T +++ KNLR C DCH AIK +S I R+
Sbjct: 609 HDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRK 668
Query: 448 LIVRDNKRFHHFKDGKCSCGDYW 470
+ VRD+ RFH F++G+CSCGDYW
Sbjct: 669 ITVRDSTRFHCFENGQCSCGDYW 691
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 74/116 (63%)
Query: 102 LCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVN 161
LC + L +A++L+G +S Y L+++C + +LE GK+VHE ++ S F + +
Sbjct: 64 LCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIW 123
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
NRL+ MY KCG + DAR+VFD+MP R+L SW +M++GY G ++ +F +M +
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%)
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISG 198
+ GK +H + ++ + + + + L+ MYGKCG + +AR +FDK+ E+++ SW MI
Sbjct: 234 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDR 293
Query: 199 YTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPC 258
Y + R +G +F ++ + P+ TF G M G P
Sbjct: 294 YFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
Query: 259 REHYLEVINILGNAGQLNEAEEFVEKMP 286
++++ G + A+ V+ P
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCP 381
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 197/378 (52%), Gaps = 30/378 (7%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
DS+ +++LL C +G++ G VH+++ + V++ LI +Y +CG + AR VF
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMK-QAGVEPDGETFXXXXXXXXXXXXX 240
DKM E N+++W MIS Y +G G + +F +M+ G P+ TF
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 241 XXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLE---LGVDIWQA 296
G ++ M K Y + P EH++ ++++LG AG L+EA +F+ ++ +W A
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 297 LRNFARIHGDIDLEDRAEELLIGFDPSKAS---------------------ADKLPTPPR 335
+ ++H + DL + LI +P D +
Sbjct: 387 MLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNL 446
Query: 336 KKQSAINMLEEKNRVAEYRCSIPYKEEVNE---KLKGLSGQLREAGYVPDTRYVLHDIDE 392
+KQ +++E +N+ + +E E L+ L + +E GY P + V+H ++E
Sbjct: 447 RKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEE 506
Query: 393 EEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 452
EEKE AL+YHSE+LA+A+GL+ T + I+KNLRIC DCH+A K +S + R++ VRD
Sbjct: 507 EEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIVSNRQITVRD 565
Query: 453 NKRFHHFKDGKCSCGDYW 470
RFHHF++G CSC DYW
Sbjct: 566 KLRFHHFQNGSCSCLDYW 583
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+ +++K C D +L GK VH S F + V L+ Y KCG M+ AR+VFD+MP
Sbjct: 110 FTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP 169
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFM 245
E+++ +W ++SG+ NG D+ + VF QM+++G EPD TF G
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 246 HFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
+ + G+ + +IN+ G + +A E +KM E V W A+ + HG
Sbjct: 230 VHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHG 288
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 208/405 (51%), Gaps = 43/405 (10%)
Query: 106 GKLNQALELM-------GHGAVADSSVYLALLKLCEDSGSLESGKRVHEF-LKKSSFNGE 157
G + LEL+ GHG + ++L C SG+L G+ VH + LKK GE
Sbjct: 222 GFTREVLELLAEMVFRCGHGL--NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGE 279
Query: 158 ------VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
V V L+ MY KCG + + VF M +RN+ +W + SG ++G+G + +
Sbjct: 280 EASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDM 339
Query: 212 FQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGN 271
F QM + V+PD TF G+ F S++ YG+ P +HY ++++LG
Sbjct: 340 FPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGR 398
Query: 272 AGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKAS----- 326
AG + EAE + +MP+ + +L +HG +++ +R + LI P
Sbjct: 399 AGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILM 458
Query: 327 ------------ADKLPTPPRKK-------QSAINMLEEKNRVAEYRCSIPYKEEVNEKL 367
AD L RK+ S+I + + +R + S P +E+ KL
Sbjct: 459 SNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKL 518
Query: 368 KGLSGQLREAGYVPDTRYVLH--DIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIK 425
+ ++R AGYVPD ++ + D EEKE+AL HSE+LA+ +GL+ T P T L + K
Sbjct: 519 NEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFK 578
Query: 426 NLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
NLRIC DCH+A+KI+SK+ RE+I+RD RFH FK G CSC DYW
Sbjct: 579 NLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 188/370 (50%), Gaps = 25/370 (6%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+ LL + L+ G +H + KS + V V N L+ MY K G ++DAR+ F M
Sbjct: 341 FAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMT 400
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFM 245
R++ +W MISG + +G G + L F +M G P+ TF G
Sbjct: 401 FRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLH 460
Query: 246 HF-ESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIH 304
+F + MK++ + P +HY ++ +L AG +AE+F+ P+E V W+ L N +
Sbjct: 461 YFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVR 520
Query: 305 GDIDLEDRAEELLIGFDPSKASADKLPTPPR---------------------KKQSAINM 343
+ L + E I P+ + L + KK+ ++
Sbjct: 521 RNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSW 580
Query: 344 LEEKNRVAEYRCSIPYKEEVN---EKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQ 400
+ +N+ + E+ K+K + +++ GY PD HD+DEE++E L
Sbjct: 581 IGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLS 640
Query: 401 YHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFK 460
YHSE+LA+AYGLI TP ++ L + KN+RIC DCH+AIK++SKI R +++RD+ RFHHF
Sbjct: 641 YHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFL 700
Query: 461 DGKCSCGDYW 470
DG+CSC DYW
Sbjct: 701 DGQCSCCDYW 710
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 129 LLKLCEDSGSLESGKRVHEFL---KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
LLK+C +S L G+ +H L +SS + N LI +Y KC AR++FD MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
ERN+ SWC M+ GY +G + L +F+ M +G
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSG 130
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 87 DTPFA-ASSSNADLMSLCEEGKLNQALELMGHGA----VADSSVYLALLKLCEDSGSLES 141
D P+ S ++ L E G + L+++ A V ++ YL+ L+L + L
Sbjct: 196 DLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNL 255
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
+VH + + FN EVE LI MYGKCG + A+RVFD +N+ ++ Y
Sbjct: 256 ALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQ 315
Query: 202 NGRGDDGLLVFQQMKQAGVEPDGETF 227
+ ++ L +F +M V P+ TF
Sbjct: 316 DKSFEEALNLFSKMDTKEVPPNEYTF 341
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 2/156 (1%)
Query: 125 VYLALLKLCEDSGSLESGKRVHE-FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK 183
V + K C +SG +E GK+ H FLK + E V N L+ MY C G +A RV D
Sbjct: 138 VATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEF-VRNTLVYMYSLCSGNGEAIRVLDD 196
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXG 243
+P +LS + +SGY G +GL V ++ + T+
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLA 256
Query: 244 FMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAE 279
M +G E +IN+ G G++ A+
Sbjct: 257 LQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQ 292
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 192/363 (52%), Gaps = 25/363 (6%)
Query: 133 CEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSW 192
C + +L GK++H + KS F V V + + MY KCG ++++ +F ++ E+NL W
Sbjct: 273 CSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELW 332
Query: 193 CLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK- 251
+ISG+ + R + +++F++M+Q G+ P+ TF G F+ M+
Sbjct: 333 NTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRT 392
Query: 252 EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLED 311
YG++P HY +++ILG AG L+EA E ++ +P + IW +L R++ +++L +
Sbjct: 393 TYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAE 452
Query: 312 RAEELLIGFDPSKA----------SADK-----------LPTPPRKKQSAINMLEEKNRV 350
A E L +P A +A+K L KK + ++ K++V
Sbjct: 453 VAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKV 512
Query: 351 AEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLA 407
+ P E+ L L + R+ GY P + LHD++ +KE+ L HSE+LA
Sbjct: 513 HTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLA 572
Query: 408 IAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCG 467
+ +GL+ P + +RI+KNLRIC DCH +K S R +IVRD RFHHF DG CSCG
Sbjct: 573 LVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCG 632
Query: 468 DYW 470
D+W
Sbjct: 633 DFW 635
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
+L+LC +G++ K H + + G+V + N LI Y KCG ++ AR+VFD M ER+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
L SW MI YT N + L +F +M+ G
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEG 157
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%)
Query: 104 EEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNR 163
E L+ LE+ G ++L C + K++H K+ + + V
Sbjct: 143 ESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTA 202
Query: 164 LIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
L+ +Y KCG +KDA +VF+ M +++ +W M++GY N ++ LL++++ ++ +E +
Sbjct: 203 LLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQN 262
Query: 224 GETF 227
T
Sbjct: 263 QFTL 266
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 202/388 (52%), Gaps = 22/388 (5%)
Query: 101 SLCEEGKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNG 156
+LC++ K+ +ALE++ G + D L L KLC + +LE + VH+ +
Sbjct: 86 ALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPL---- 141
Query: 157 EVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMK 216
+ + +I MY C DA VF++MP+RN +W MI NG G+ + +F +
Sbjct: 142 DARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFI 201
Query: 217 QAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQL 275
+ G +PD E F G +HFESM ++YG+ E Y+ VI +L G L
Sbjct: 202 EEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHL 261
Query: 276 NEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKLP--TP 333
+EA +FVE+M +E V++W+ L N + G ++L DR EL+ D S+ S +
Sbjct: 262 DEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVA 321
Query: 334 PRKKQSAINMLEE-----------KNRVAEYRCSIPYKEEVNEKLKGLSGQLREAGYVPD 382
+ SA+ L+E K R+ E+R + L Q+ + G+VP
Sbjct: 322 AKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGTVSAFRSLKVQMLDIGFVPA 381
Query: 383 TRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSK 442
TR ++EEEKE+ L + S +LA A+ +I++ R L +++N+R C D HN K++S
Sbjct: 382 TRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISL 441
Query: 443 IVGRELIVRDNKRFHHFKDGKCSCGDYW 470
I GR LI RD K++H +K+G CSC DYW
Sbjct: 442 ITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 208/420 (49%), Gaps = 43/420 (10%)
Query: 94 SSNADLMSLCEEGKLNQALEL---MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLK 150
S N+ + +L G+ + AL+L M D ++L C GSL G H FL
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLL 278
Query: 151 KSS---FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
+ +V V N LI MY KCG ++ A +VF M +R+L+SW MI G+ +GR ++
Sbjct: 279 RKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEE 338
Query: 208 GLLVFQQM--KQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLE 264
+ F +M K+ V P+ TF G +F+ M ++Y I P EHY
Sbjct: 339 AMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGC 398
Query: 265 VINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG-DIDLEDRAEELLIGFDPS 323
+++++ AG + EA + V MP++ IW++L + G ++L + +IG
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKED 458
Query: 324 KASADK------------LPTPPRKKQSAI--NMLEEKNRVAEYRCSI------------ 357
S++ + R I ++ E E CS
Sbjct: 459 NESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFA 518
Query: 358 -----PYKEEVNEKLKGLSGQLREAGYVPDTRY--VLHDIDEEEKEKALQYHSERLAIAY 410
P +++ ++LK + +LR GY+PD ++ ++ KE +L+ HSERLAIA+
Sbjct: 519 GDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAF 578
Query: 411 GLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
GLI+ PP+T +RI KNLR+C DCH K++SK+ E+IVRD RFHHFKDG CSC DYW
Sbjct: 579 GLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + +LK C GK+VH + K F G+V VNN LI +YG CG + AR+VF
Sbjct: 150 DKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVF 209
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
D+MPER+L SW MI G D L +F++M Q EPDG T
Sbjct: 210 DEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYT 253
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 197/375 (52%), Gaps = 25/375 (6%)
Query: 121 ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
A+ S ++ L C ++G+L G +H FL ++ + V L+ MY KCG + A +
Sbjct: 232 AEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHI 291
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXX 240
F KM +RN ++ MISG ++G G+ L +F +M + G+EPD +
Sbjct: 292 FQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLV 351
Query: 241 XXGFMHF-ESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRN 299
G F E +KE + P EHY ++++LG AG L EA E ++ +P+E IW+ +
Sbjct: 352 KEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Query: 300 FARIHGDIDLEDRAEE-------------LLIG--------FDPSKASADKLPTPPRKKQ 338
R+ +I+L A + LLI +D + ++ K+
Sbjct: 412 QCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQT 471
Query: 339 SAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEK 395
+++E K + + S P +E+ + L + QL+ GY PD +L ++DEEEK
Sbjct: 472 PGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEK 531
Query: 396 EKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 455
++ L+ HS+++AIA+GL+ TPP + ++I +NLR+C DCH K +S I RE++VRD R
Sbjct: 532 KERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNR 591
Query: 456 FHHFKDGKCSCGDYW 470
FH FK G CSC DYW
Sbjct: 592 FHLFKGGTCSCKDYW 606
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+M G D+ Y LLK C S+ GK++H + K +V V N LI MYG+CG
Sbjct: 122 EMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCG 181
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
M+ + VF+K+ + +SW M+S G + LL+F+ M
Sbjct: 182 EMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGM 224
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 204/406 (50%), Gaps = 30/406 (7%)
Query: 90 FAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
F+ S N + L +++ G +++ LLK+ L SGK VH F
Sbjct: 368 FSGCSKNGNF-----RNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+ + + V L+ MYGK G ++ A +F + ++L+SW M+ GY + GRG++G+
Sbjct: 423 LRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINI 268
F M +AG+EPD TF G+ +F+ M+ YGI P EH ++++
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKAS-- 326
LG +G L+EA +F++ M L+ IW A + +IH D++L + A + L +P ++
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANY 602
Query: 327 --ADKLPTPPRKKQSA--INMLEEKNRV----------AEYRCSIPYKE--------EVN 364
L + + + I L NRV + I Y E ++
Sbjct: 603 MMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Query: 365 EKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRII 424
+L L +++++GYVPDT + DI + EKEK L H+E+LA+ YGLI +R++
Sbjct: 663 FELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVV 722
Query: 425 KNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
KN IC D H K MS + RE+++++ R HHF+DGKCSC D W
Sbjct: 723 KNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 4/184 (2%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N +M G +A+EL GA A S + LL++C + G+++H ++ +
Sbjct: 58 NEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR 117
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
V + N LI MY + G ++ +R+VF+ M +RNLSSW ++S YT G DD + +
Sbjct: 118 LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGL 177
Query: 212 FQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGN 271
+M+ G++PD T+ + M+ G+ P ++ +
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE 237
Query: 272 AGQL 275
G L
Sbjct: 238 PGHL 241
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
+LL+ + G L+ GK +H ++ ++ +V V LI MY K G + AR VFD M +
Sbjct: 230 SLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK 289
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF 247
N+ +W ++SG + D + +M++ G++PD T+
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 248 ESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLE 288
MKE G+AP + + + G A + KM E
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 204/409 (49%), Gaps = 34/409 (8%)
Query: 94 SSNADLMSLCEEGKLNQALELM-----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEF 148
S N + L + +A+E+ G AD +++ C G+L+ K ++ +
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 149 LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDG 208
++K+ +V + L+ M+ +CG + A +F+ + R++S+W I + G +
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 209 LLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVIN 267
+ +F M + G++PDG F G F SM K +G++P HY +++
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 268 ILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSK--- 324
+LG AG L EA + +E MP+E IW +L R+ G++++ A E + P +
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 325 --------ASADK---------------LPTPPRKKQSAINMLEEKNRVAEYRCSIPYKE 361
ASA + L PP S+I + + + S P
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPP--GTSSIQIRGKTHEFTSGDESHPEMP 733
Query: 362 EVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTL 421
+ L +S + G+VPD VL D+DE+EK L HSE+LA+AYGLIS+ TT+
Sbjct: 734 NIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTI 793
Query: 422 RIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
RI+KNLR+C DCH+ K SK+ RE+I+RDN RFH+ + GKCSCGD+W
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 76 LKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQA----LELMGHGAVADSSVYLALLK 131
L + V +N ++ N+ + G N+A L +M G D + L
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 132 LCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSS 191
C S + +G ++H + K + ++ V N L+ Y +CG + AR+VFD+M ERN+ S
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 192 WCLMISGYTVNGRGDDGL-LVFQQMKQAGVEPDGETF 227
W MI GY D + L F+ ++ V P+ T
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Query: 94 SSNADLMSLCEEGKLNQALE---------LMGHGAVADSSVYLALLKLCEDSGSLESGKR 144
+SN DL + + Q L +M G D L+ + C ++ GK
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 145 VHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGR 204
H ++ ++ F + N LI MY KC A R+FD+M + + +W +++GY NG
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 205 GDDGLLVFQQMKQAGV 220
D F+ M + +
Sbjct: 419 VDAAWETFETMPEKNI 434
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNN----RLIGMYGKCGGMKDA 177
+S + ++ C LE+G++V+ F++ N +EVN+ L+ MY KC + A
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIR----NSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+R+FD+ NL M S Y G + L VF M +GV PD
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 194/368 (52%), Gaps = 32/368 (8%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
L C G L K VH + S +++ L+ +Y KCG + +R VF + ++
Sbjct: 172 LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDV 231
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFES 249
S W MI+G+ +G + + VF +M+ V PD TF G +F
Sbjct: 232 SIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGL 291
Query: 250 M-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDID 308
M + + I P EHY ++++LG AG++ EA E +E MP+E V IW++L + +R + + +
Sbjct: 292 MSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPE 351
Query: 309 LEDRAEELLIGFDPSKASA------DKLPTPPRKKQSAIN----MLEEKNRVAEYRCSIP 358
L + A + + SKA + + + +K +SA M +E R A+ + +
Sbjct: 352 LGEIAIQ-----NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
Query: 359 Y----------------KEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYH 402
+ + + + L+GL + + G+V DT VL D+ EEEKE+ L YH
Sbjct: 407 FGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYH 466
Query: 403 SERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDG 462
SE+LA+AY ++ + P T +RI KN+R+C DCHN IK +SK++ R +I+RD RFH F+DG
Sbjct: 467 SEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDG 526
Query: 463 KCSCGDYW 470
CSC DYW
Sbjct: 527 LCSCRDYW 534
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 209/410 (50%), Gaps = 33/410 (8%)
Query: 94 SSNADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S ++ ++ +EG+ +A+ L + DS +++ + D L GK++
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
K E V N ++ MY KCG + +A + F +M +++ SW ++I+GY +G G +
Sbjct: 340 VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 399
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINI 268
+F +M + +EPD + G F + E +GI P EHY V+++
Sbjct: 400 RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDL 459
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLI---------- 318
LG AG+L EA+ ++ MP++ V IWQ L + R+HGDI+L ++L+
Sbjct: 460 LGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANY 519
Query: 319 ----------GFDPSKASADKLP-TPPRKKQSAINMLEEKNRVAEYRC---SIPYKEEVN 364
G+ + +A +L KK++ ++ +E + V +R S P +
Sbjct: 520 VMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQ 579
Query: 365 EKLKGLSGQLRE-AGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLIS---TPPRTT 420
E LK +LRE GYV ++ LHDID+E KE+ L+ HSE+LAI L + T
Sbjct: 580 ETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKT 639
Query: 421 LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
+R+ KNLR+C DCH IK +SKI +VRD RFH F+DG CSCGDYW
Sbjct: 640 IRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
+++L++C G + G +VH +L KS + +N LI MY KC A +VFD MPE
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGF-- 244
RN+ SW ++SG+ +NG L +F +M + G+ P+ TF G
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 245 ------MHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKM 285
+ FE M E G + ++++ G++NEAE+ ++
Sbjct: 130 HGFCLKIGFEMMVEVGNS--------LVDMYSKCGRINEAEKVFRRI 168
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 96 NADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFN 155
N DL +G L+ E+ G + + LK C +LE G ++H F K F
Sbjct: 85 NGDL-----KGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFE 139
Query: 156 GEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
VEV N L+ MY KCG + +A +VF ++ +R+L SW MI+G+ G G L F M
Sbjct: 140 MMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMM 199
Query: 216 KQAGVE--PDGETF 227
++A ++ PD T
Sbjct: 200 QEANIKERPDEFTL 213
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVA------DSSVYLALLKLCEDSGSLESGKRVHE 147
S NA + G ++AL+ G A D +LLK C +G + +GK++H
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 148 FLKKSSFN--GEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRG 205
FL +S F+ + L+ +Y KCG + AR+ FD++ E+ + SW +I GY G
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 206 DDGLLVFQQMKQAGVEPD 223
+ + +F+++++ + D
Sbjct: 295 VEAMGLFKRLQELNSQID 312
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 189/349 (54%), Gaps = 25/349 (7%)
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISG 198
LE G+++H K F + + N MY KCG + + ++ R+L SW ++IS
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623
Query: 199 YTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAP 257
+G ++ F +M + G++P TF G +++ + +++G+ P
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 683
Query: 258 CREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELL 317
EH + VI++LG +G+L EAE F+ KMP++ +W++L +IHG++D +A E L
Sbjct: 684 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 743
Query: 318 IGFDPSK-----ASADKLPTPPR----------------KKQSAINMLEEKNRVAEYRC- 355
+P S++ T R KK+ A + ++ K++V+ +
Sbjct: 744 SKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 803
Query: 356 --SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLI 413
+ P E+ KL+ + ++E+GYV DT L D DEE+KE L HSERLA+AY L+
Sbjct: 804 DRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALM 863
Query: 414 STPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDG 462
STP +T+RI KNLRIC DCH+ K +S+++GR +++RD RFHHF+ G
Sbjct: 864 STPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Query: 118 GAVADSSVYLALLKLCEDSGSL-ESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKD 176
G S V +L+ C SGS+ G +VH F+ KS +V V+ ++ +YG G +
Sbjct: 36 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 95
Query: 177 ARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
+R+VF++MP+RN+ SW ++ GY+ G ++ + +++ M+ GV
Sbjct: 96 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGV 139
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 94 SSNADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N+ + S +G+ AL L+ G + + + L C E G+ +H +
Sbjct: 312 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
S + N L+ MYGK G M ++RRV +MP R++ +W +I GY + D L
Sbjct: 372 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 431
Query: 210 LVFQQMKQAGVEPD 223
FQ M+ GV +
Sbjct: 432 AAFQTMRVEGVSSN 445
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 118 GAVADSSVYLALLKLCEDSGSL-ESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKD 176
G ++ +++L C G L E GK +H ++ + F + V N LI MY KCG +
Sbjct: 441 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 500
Query: 177 ARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
++ +F+ + RN+ +W M++ +G G++ L + +M+ GV D +F
Sbjct: 501 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSF 551
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 1/156 (0%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
G+ +H + K F+ V V N L+ MY G +A VF +MP ++L SW +++ +
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 202 NGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREH 261
+GR D L + M +G + TF G + + G+ +
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 262 YLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
++++ G G+++E+ + +MP V W AL
Sbjct: 383 GNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNAL 417
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 147/476 (30%), Positives = 231/476 (48%), Gaps = 47/476 (9%)
Query: 30 ASSKPLCNYAAPDKLHP---RRNGTSNSRSAHKAPHLQKANNNTSIEPKLKLDQSVHQNQ 86
A ++ LC+ +A D+LH RR +++S N + KL + V
Sbjct: 118 ACARALCS-SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRD-- 174
Query: 87 DTPFAASSSNADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESG 142
+S NA + L + ++A+EL G +A L C G ++ G
Sbjct: 175 -----VASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 143 KRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP-ERNLSSWCLMISGYTV 201
+ + N V V+N I MY KCG + A +VF++ ++++ +W MI+G+ V
Sbjct: 230 ENIFHGYS----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 202 NGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREH 261
+G L +F +++ G++PD ++ G F +M G+ +H
Sbjct: 286 HGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKH 345
Query: 262 YLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRA----EELL 317
Y V+++L AG+L EA + + M + +WQ+L + I+ D+++ + A +E+
Sbjct: 346 YGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMG 405
Query: 318 IGFDP-----SKASA------------DKLPTPPRKKQSAINMLEEKNRVAEYRCSIPYK 360
+ D S A D + + KK ++ +E K + E+ S
Sbjct: 406 VNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSH 465
Query: 361 E---EVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLI---S 414
E E+ EK+ + ++RE GYV T VLHDI EEEKE AL YHSE+LA+AYGL+
Sbjct: 466 EQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDG 525
Query: 415 TPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
+ +R+I NLRICGDCH K +SKI RE+IVRD RFH FKDG CSC D+W
Sbjct: 526 ADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 203/408 (49%), Gaps = 34/408 (8%)
Query: 94 SSNADLMSLCEEGKLNQALELMG-----HGAVADSSVYLALLKLCEDSGSLESGKRVHEF 148
S N + L + +A+E+ G AD +++ C G+L+ K ++ +
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 149 LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDG 208
++K+ +V + L+ M+ +CG + A +F+ + R++S+W I + G +
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 209 LLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVIN 267
+ +F M + G++PDG F G F SM K +G++P HY +++
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 268 ILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSK--- 324
+LG AG L EA + +E MP+E IW +L R+ G++++ A E + P +
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 325 --------ASADK---------------LPTPPRKKQSAINMLEEKNRVAEYRCSIPYKE 361
ASA + L PP S+I + + + S P
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPP--GTSSIQIRGKTHEFTSGDESHPEMP 733
Query: 362 EVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTL 421
+ L +S + G+VPD VL D+DE+EK L HSE+LA+AYGLIS+ TT+
Sbjct: 734 NIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTI 793
Query: 422 RIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDY 469
RI+KNLR+C DCH+ K SK+ RE+I+RDN RFH+ + GKCSCGD+
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 76 LKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQA----LELMGHGAVADSSVYLALLK 131
L + V +N ++ N+ + G N+A L +M G D + L
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 132 LCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSS 191
C S + +G ++H + K + ++ V N L+ Y +CG + AR+VFD+M ERN+ S
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 192 WCLMISGYTVNGRGDDGL-LVFQQMKQAGVEPDGETF 227
W MI GY D + L F+ ++ V P+ T
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Query: 94 SSNADLMSLCEEGKLNQALE---------LMGHGAVADSSVYLALLKLCEDSGSLESGKR 144
+SN DL + + Q L +M G D L+ + C ++ GK
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 145 VHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGR 204
H ++ ++ F + N LI MY KC A R+FD+M + + +W +++GY NG
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 205 GDDGLLVFQQMKQAGV 220
D F+ M + +
Sbjct: 419 VDAAWETFETMPEKNI 434
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNN----RLIGMYGKCGGMKDA 177
+S + ++ C LE+G++V+ F++ N +EVN+ L+ MY KC + A
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIR----NSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+R+FD+ NL M S Y G + L VF M +GV PD
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 199/393 (50%), Gaps = 29/393 (7%)
Query: 104 EEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNR 163
EE L + ++M +S + L+ C + E G+++H + K F+ + +
Sbjct: 349 EEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSG 408
Query: 164 LIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
LI +YGKCG AR VFD + E ++ S MI Y NG G + L +F++M G++P+
Sbjct: 409 LIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPN 468
Query: 224 GETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVE 283
T G F+S ++ I +HY ++++LG AG+L EAE
Sbjct: 469 DVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTT 528
Query: 284 KMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP--------------------- 322
++ + + +W+ L + ++H +++ +R ++ +P
Sbjct: 529 EV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNR 587
Query: 323 -----SKASADKLPTPPRKKQSAINMLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLREA 377
SK KL P IN E +A S P E++ E L+ L + ++
Sbjct: 588 VIEMKSKMKDMKLKKNPAMSWVEINK-ETHTFMAGDLFSHPNSEQILENLEELIKKSKDL 646
Query: 378 GYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAI 437
GYV D V D++E KE++L HSE+LAIA+ + ++RI+KNLR+C DCH+ I
Sbjct: 647 GYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVG-GSIRILKNLRVCVDCHSWI 705
Query: 438 KIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
KI+S+++ RE+I RD+KRFHHF+DG CSCGDYW
Sbjct: 706 KIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
Y ++L C + + +GK +H + KS F + L+ MY +C + D+ RVF +
Sbjct: 270 YASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE 329
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
N SW +ISG NGR + L+ F++M + ++P+ T
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTL 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
LL+ C D S+ K + + KS F E+ ++L+ KCG + AR+VFD M ER+
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERH 129
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ +W +I+ + R + + +++ M V PD T
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTL 168
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 190/370 (51%), Gaps = 28/370 (7%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
+L +C G E G ++H + K+ + ++ + N LI MY KC DA ++F+ M E +
Sbjct: 527 ILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHD 586
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMH-- 246
+ SW +IS Y + GD+ L ++ +M + ++PD T
Sbjct: 587 VISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDL 646
Query: 247 FESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
F SMK Y I P EHY + +LG+ G L EAE+ + MP++ V + +AL + RIH
Sbjct: 647 FLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHS 706
Query: 306 DIDLEDRAEELLIGFDPSKASA---------------------DKLPTPPRKKQSAINML 344
+ + R +L++ P S +++ +K A + +
Sbjct: 707 NTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Query: 345 EEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQY 401
+N++ + S P ++++ L+ L + + GY P+T YVL ++DE K+ L +
Sbjct: 767 IHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFH 826
Query: 402 HSERLAIAYGLISTPPR-TTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFK 460
HS +LA+ YG++S+ R +R++KN+ +CGDCH K +S +V RE+++RD+ FHHF
Sbjct: 827 HSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFV 886
Query: 461 DGKCSCGDYW 470
+GKCSC D W
Sbjct: 887 NGKCSCRDLW 896
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 63 LQKANNNTSIEPKLKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELM-----GH 117
L ++ +S + LKL + Q +S N + SL +EGK ++A +L
Sbjct: 225 LYDKDSGSSCDDVLKLFDEIPQRD-----VASWNTVVSSLVKEGKSHKAFDLFYEMNRVE 279
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G DS LL C DS L G+ +H + E+ VNN LIG Y K MK
Sbjct: 280 GFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKV 339
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
+++ M ++ ++ MI+ Y G D + +F + +
Sbjct: 340 ESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE 379
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG--MKDARRVFDK 183
++A+L C G ++H + KS F V V+N L+ +Y K G D ++FD+
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDE 243
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQA 218
+P+R+++SW ++S G+ +F +M +
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 201/408 (49%), Gaps = 33/408 (8%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
A + + K +ALE G AD + C G+ + R + +K
Sbjct: 250 TAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQK 309
Query: 152 SSFN--GEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
S ++ V + + LI MY KCG +++A VF M +N+ ++ MI G +GR + L
Sbjct: 310 SGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEAL 369
Query: 210 LVFQQM-KQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVIN 267
+F M Q ++P+ TF G F+SM + +G+ P R+HY +++
Sbjct: 370 HLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVD 429
Query: 268 ILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPS---- 323
+LG G+L EA E ++ M +E +W AL RIH + ++ + A E L +P
Sbjct: 430 LLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGN 489
Query: 324 -------KASADKLPTPPR----------KKQSAINMLEEKN----RVAEYRCSIPYKEE 362
ASA R KK A++ + +KN + + P +
Sbjct: 490 YILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNK 549
Query: 363 VNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR 422
+ +KL+ L +L GY PD V +D+ + K L H+E+LA+A+ L++T +T+
Sbjct: 550 IQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTIT 609
Query: 423 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
I+KNLR+C DCH +++ S++ G+ +I+RDN RFHHF+ G CSCGD+W
Sbjct: 610 IMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 105 EGKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEV 160
EGK ++A+ + G S + ALLK C L G++ H + V V
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYV 186
Query: 161 NNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
N +I MY KC + AR+VFD+MPER++ SW +I+ Y G + +F+ +
Sbjct: 187 GNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 182/356 (51%), Gaps = 25/356 (7%)
Query: 137 GSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMI 196
G+L GK +H + ++ + + N L+ MY +CG M A F+ +++++SW +++
Sbjct: 512 GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILL 570
Query: 197 SGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIA 256
+GY+ G+G + +F +M ++ V PD TF G M+F M++YG+
Sbjct: 571 TGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVT 630
Query: 257 PCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEEL 316
P +HY V+++LG AG+L EA +F++KMP+ +W AL N RIH IDL + + +
Sbjct: 631 PNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQH 690
Query: 317 LIGFDPSKASADKLPT-------PPRKKQSAINMLEEKNRVAEYRCSI------------ 357
+ D L R+ M++E + CS
Sbjct: 691 IFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLS 750
Query: 358 -----PYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGL 412
P +E+N L+G ++ E G + D E +++ HSER AIA+GL
Sbjct: 751 DDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGL 810
Query: 413 ISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGD 468
I+T P + + KNL +C +CH+ +K +SK V RE+ VRD + FHHFKDG+CSCGD
Sbjct: 811 INTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 99 LMSLCEEGKLNQALELMGHG----AVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSF 154
L LC GKL +A++L+ D V++AL++LCE + E G +V+ S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 155 NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQ 214
+ VE+ N + M+ + G + DA VF KM ERNL SW +++ GY G D+ + ++ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 215 MKQA-GVEPDGETF 227
M GV+PD TF
Sbjct: 186 MLWVGGVKPDVYTF 199
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 8/172 (4%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G D + +L+ C L GK VH + + + +++V N LI MY KCG +K A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
R +FD+MP R++ SW MISGY NG +GL +F M+ V+PD T
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 238 XXXXXGFMHFESMKEYGIAPCREHYLEVINILG----NAGQLNEAEEFVEKM 285
G + Y I + V N L NAG EAE+ +M
Sbjct: 311 GDRRLG----RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 94 SSNADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S NA + E G ++ LEL G D +++ CE G G+ +H ++
Sbjct: 264 SWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYV 323
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+ F ++ V N L MY G ++A ++F +M +++ SW MISGY N D +
Sbjct: 324 ITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAI 383
Query: 210 LVFQQMKQAGVEPD 223
++ M Q V+PD
Sbjct: 384 DTYRMMDQDSVKPD 397
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D A+L C G L++G +H+ K+ V V N LI MY KC + A +F
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+P +N+ SW +I+G +N R + L+ +QMK ++P+
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPN 497
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 192/381 (50%), Gaps = 35/381 (9%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + ++LK C + +H + K F + +NN LI Y KCG + RVF
Sbjct: 368 DWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVF 427
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
D M R++ SW M+ Y+++G+ D L VFQ+M + PD TF
Sbjct: 428 DDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVE 484
Query: 242 XGFMHFESMKEYG-IAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNF 300
G F SM E P HY VI++L A + EAEE +++MP++ +W AL
Sbjct: 485 EGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGS 544
Query: 301 ARIHGDIDL----EDRAEELLI------------------GFDPSKASADKLPTPPRKKQ 338
R HG+ L D+ +EL+ F+ + S ++ T +K+
Sbjct: 545 CRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKE 604
Query: 339 SAINMLEEKNRVAEYRCS---IPYKEEVNEKLKGLSGQLREAGYVPDTRYV-LHDIDEEE 394
++ E N+V E+ P KE V +LK L L+E GYVP+ R DEE+
Sbjct: 605 PDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQ 664
Query: 395 KEKALQYHSERLAIAYGLI-----STPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELI 449
+E L +HSE+LA+A+ ++ S ++I+KN RIC DCHN +K+ SK++G+E++
Sbjct: 665 EEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEIL 724
Query: 450 VRDNKRFHHFKDGKCSCGDYW 470
+RD+ RFHHFKD CSC DYW
Sbjct: 725 MRDSNRFHHFKDSSCSCNDYW 745
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 99 LMSLCEEGKLNQALELMGHGAVADSS--VYLALLKLCEDSGSLESGKRVHEFLKKS--SF 154
L +L G + +A+ L V S Y AL + C + +L G +H + +
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCY 92
Query: 155 NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQ 214
+ V + N LI MY KCG + AR+VFD MPERN+ SW +I+GY G +G +F
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 215 M 215
M
Sbjct: 153 M 153
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 194/408 (47%), Gaps = 32/408 (7%)
Query: 94 SSNADLMSLCEEGKLNQALEL---MGH-GAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N + G NQAL + MG+ G DS +ALL C +L G +H
Sbjct: 175 SWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIA 234
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
V V+N LI MY KCG +++A VF+ M +R++ +W MI GY V+G G + +
Sbjct: 235 CDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAI 294
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINI 268
F++M +GV P+ TF G HFE M ++ + P +HY ++++
Sbjct: 295 SFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDL 354
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASAD 328
G AGQL + E + +W+ L +IH +++L + A + L+ + A
Sbjct: 355 YGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDY 414
Query: 329 KLPT---PPRKKQSAINMLEEKNRVAEYRCSIP-----------YKEEVNEKLKGLSGQL 374
L T A + + R + + ++P +K V++K+ S +
Sbjct: 415 VLMTSIYSAANDAQAFASMRKLIRSHDLQ-TVPGWSWIEIGDQVHKFVVDDKMHPESAVI 473
Query: 375 RE-----------AGYVP-DTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLR 422
AGY P D+ + + A HSE+LAIAYGL+ T TTLR
Sbjct: 474 YSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLR 533
Query: 423 IIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
I KNLR+C DCH+ K +SK RE+IVRD RFHHF DG CSC DYW
Sbjct: 534 ITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
LK CE S+ +H + +S F + V L+ Y G ++ A +VFD+MP R+L
Sbjct: 114 LKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDL 173
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
SW +MI ++ G + L ++++M GV D T
Sbjct: 174 VSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTL 211
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 198/428 (46%), Gaps = 36/428 (8%)
Query: 70 TSIEPKLKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLAL 129
+S E + Q + + D ++A S MS EE + ++ +S Y ++
Sbjct: 334 SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSI 393
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
+ C G +VH K S G + LI MY KCG + DA VF+ M ++
Sbjct: 394 FQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDI 453
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFES 249
+W ISG+ G + L +F++M G++P+ TF G ++
Sbjct: 454 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDT 513
Query: 250 M-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDID 308
M ++Y +AP +HY +I+I +G L+EA +F++ MP E W+ + H +++
Sbjct: 514 MLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLE 573
Query: 309 LEDRAEELLIGFDPSKASADKLP----TPPRKKQSAINMLE---EKNRVAEYRCSI---- 357
L + A E L DP + LP T K + A M++ E+ E CS
Sbjct: 574 LGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEK 633
Query: 358 -------------PYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSE 404
P +E+ EKLK G + + + E+ + L HSE
Sbjct: 634 GKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGD---------MFQCNMTERREQLLDHSE 684
Query: 405 RLAIAYGLISTPPRTT--LRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDG 462
RLAIA+GLIS +++ KNLR C DCH K +S + G E+++RD++RFHHFK+G
Sbjct: 685 RLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEG 744
Query: 463 KCSCGDYW 470
KCSC DYW
Sbjct: 745 KCSCNDYW 752
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 10/189 (5%)
Query: 44 LHPR-RNGTSNSRSAHKAPHLQKANNNTSIEPKLKLDQSVHQNQDTPFAASSSNADLMSL 102
LH R R G N + LQ S+E KL ++ + A S + +
Sbjct: 105 LHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKL-----FDEMSELNAVSRTTMISAY 159
Query: 103 CEEGKLNQALEL----MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEV 158
E+G L++A+ L + G SS+Y LLK + +L+ G+++H + ++
Sbjct: 160 AEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNT 219
Query: 159 EVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQA 218
+ ++ MY KCG + A+RVFD+M + + ++ GYT GR D L +F +
Sbjct: 220 SIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTE 279
Query: 219 GVEPDGETF 227
GVE D F
Sbjct: 280 GVEWDSFVF 288
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N L+SL + KLN+A E + G S Y L + C + SL G+ +H+ ++
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
N V + N ++ MY +C ++DA ++FD+M E N S MIS Y G D + +
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 212 FQQMKQAGVEPDGETF 227
F M +G +P +
Sbjct: 172 FSGMLASGDKPPSSMY 187
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%)
Query: 108 LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGM 167
L ++L+ G DS V+ +LK C L GK++H + K EV V L+
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDF 329
Query: 168 YGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMK 216
Y KC + A R F ++ E N SW +ISGY + ++ + F+ ++
Sbjct: 330 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 378
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 190/383 (49%), Gaps = 33/383 (8%)
Query: 121 ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
A+ + +++ C G L+ GK H + + + V L+ MY KCG + A ++
Sbjct: 234 ANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKI 293
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXX 240
F ++ ++ S+ MI +G G+ + +F +M + P+ T
Sbjct: 294 FLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLV 353
Query: 241 XXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPL--ELGVDIWQAL 297
G + M E YG+ P HY V+++LG G+++EA E + + + E G +W AL
Sbjct: 354 NEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGAL 413
Query: 298 RNFARIHGDIDLEDRAEELLI---------------------GFDPSKASADKLPTPPRK 336
+ R+HG +++ A + LI G++ S++ ++
Sbjct: 414 LSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNV 473
Query: 337 KQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLREAGY------VPDTRYVL 387
K+ A + +E K+ V + S E+ LK L +++E G+ + + V
Sbjct: 474 KERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVF 533
Query: 388 HDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRE 447
D+DEE K++ + H ERLA+AYGL+ P +T+RI+ NLR+C DCH A K++S+IV RE
Sbjct: 534 VDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVERE 593
Query: 448 LIVRDNKRFHHFKDGKCSCGDYW 470
++VRD RFH FK+G C+C DYW
Sbjct: 594 IVVRDVNRFHCFKNGSCTCRDYW 616
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+ ++ K C GK +H L+ S + V++ L+ MYGKC ++ ARRVFD M
Sbjct: 134 FASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 186 --ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQA 218
RN+ SW MI+ Y N RG + + +F+ A
Sbjct: 194 GYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 145 VHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGR 204
+H K F + N L+ Y K + AR++FD+M E N+ SW +ISGY G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 205 GDDGLLVFQQMKQ-AGVEPDGETF 227
+ L +FQ+M + V P+ TF
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTF 134
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 130/204 (63%), Gaps = 17/204 (8%)
Query: 270 GNAGQLNEAE-EFVEKMPLELGVDIWQALRNFAR-IHGDIDLED-RAEELLIGFDPSKAS 326
G Q+ E + +K+P E +D W R AR + G + R + L PS S
Sbjct: 50 GVETQVKETSPKVFDKLP-ERNLDTWSGGRETARGLSGSVVRNTVRKDTTLRHISPSSHS 108
Query: 327 ADKLPTPPRKKQSAINMLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLREAGYVPDTRYV 386
T R + I+ E+K V + + KLK L ++R+AGYVP+T+YV
Sbjct: 109 -----TKVRGDKPEISGGEKKAIVDRSKAYV--------KLKSLGKEVRDAGYVPETKYV 155
Query: 387 LHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGR 446
LHDIDEE KEKAL +HSERLAIA+G+I+TPP TT+R++KNLRICGDCHN IKI+S I R
Sbjct: 156 LHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDR 215
Query: 447 ELIVRDNKRFHHFKDGKCSCGDYW 470
E+IVRDNKRFHHF+DG CSCGDYW
Sbjct: 216 EIIVRDNKRFHHFRDGNCSCGDYW 239
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 177/363 (48%), Gaps = 62/363 (17%)
Query: 106 GKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVN 161
G ++AL+L + G D V ++L + LE G++VH KS F + VN
Sbjct: 409 GSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVN 468
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
N L+ MY KCG ++DA +F+ M R+L +W +I GY NG +D F M+
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTV--- 525
Query: 222 PDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEF 281
YGI P EHY +I++ G +G + E+
Sbjct: 526 -------------------------------YGITPGPEHYACMIDLFGRSGDFVKVEQL 554
Query: 282 VEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKAS-----ADKLPTPPRK 336
+ +M +E +W+A+ +R HG+I+ +RA + L+ +P+ A ++ R+
Sbjct: 555 LHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQ 614
Query: 337 KQSA----------------INMLEEKNRVAEYRCSI---PYKEEVNEKLKGLSGQLREA 377
++A + +EEK +V + P E+ K+ + ++EA
Sbjct: 615 DEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEA 674
Query: 378 GYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAI 437
GY D + LHD+D+E KE L YHSE+LA+A+GL+ P +RIIKNLR+CGDCH+A+
Sbjct: 675 GYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAM 734
Query: 438 KIM 440
K++
Sbjct: 735 KLL 737
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHG-----AVADSSVYLALLKLCEDSGSLESGKRVHEF 148
S N+ ++ +G + +AL + G + D ++ L ++ H
Sbjct: 295 SWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCL 354
Query: 149 LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDG 208
+ K+ + VNN L+ MY K G M A +VF+ M E+++ SW +++G T NG D+
Sbjct: 355 IVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEA 414
Query: 209 LLVFQQMKQAGVEPD 223
L +F M+ G+ PD
Sbjct: 415 LKLFCNMRVGGITPD 429
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 94 SSNADLMSLCEEGK----LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S NA + C+ G N E+ G + ++L++C L G+++H
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP-ERNLSSWCLMISGYTVNGRGDDG 208
K+ F+ +V V N L+ MY +C + +A +F+ M E+N +W M++GY+ NG
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 209 LLVFQQMKQAGVEPDGETF 227
+ F+ +++ G + + TF
Sbjct: 212 IECFRDLRREGNQSNQYTF 230
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
+L G ++ + ++L C + G +VH + KS F + V + LI MY KC
Sbjct: 217 DLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCR 276
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
M+ AR + + M ++ SW MI G G + L +F +M + ++ D T
Sbjct: 277 EMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTI 331
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 193/407 (47%), Gaps = 30/407 (7%)
Query: 94 SSNADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N+ + + + GK ALEL V DS+ ++L +S SL G+ +H ++
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
KS + + N L+ MY CG ++DAR+ F+ + +++ SW +I Y V+G G +
Sbjct: 458 VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISV 517
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINI 268
+F +M + V P+ TF G+ +FESMK EYGI P EHY ++++
Sbjct: 518 WLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDL 577
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSK---- 324
+G G + A+ F+E+MP IW +L N +R H DI + + A E + +
Sbjct: 578 IGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCY 637
Query: 325 -------ASADKLPTPPRKK----------QSAINMLEEKNRVAEYRCSIPYKEEVNEKL 367
A A + R K S+ + +E K + + N+
Sbjct: 638 VLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIY 697
Query: 368 KGLSGQLREAG----YVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRI 423
+ L R G YV + + + + + + HS RLA +GLIST + +
Sbjct: 698 EVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTV 757
Query: 424 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 470
N RIC CH ++ S++ RE++V D+K FHHF +G+CSCG+YW
Sbjct: 758 RNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G AD+ Y ++K SLE GK++H + K F +V V N LI +Y K G DA
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+VF++MPER++ SW MISGY G G L++F++M + G +PD
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 7/187 (3%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSF-NGEVEVNNRLIGMYGKC 171
E++ G D ++ L C S + GK +H +S G+V V ++ MY K
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 172 GGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM-KQAGVEPDGETFXXX 230
G + A R+F+ M +RN+ +W +MI Y NGR D L FQ+M +Q G++PD T
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 231 XXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELG 290
+H +M+ G P +I++ G GQL AE ++M E
Sbjct: 341 LPASAILEGRT---IHGYAMRR-GFLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKN 395
Query: 291 VDIWQAL 297
V W ++
Sbjct: 396 VISWNSI 402
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
+ L S LE G+ +H + + F + + LI MYG+CG +K A +FD+M E+N+
Sbjct: 338 INLLPASAILE-GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNV 396
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
SW +I+ Y NG+ L +FQ++ + + PD T
Sbjct: 397 ISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 184/387 (47%), Gaps = 30/387 (7%)
Query: 104 EEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE 159
E GK AL ++ G G D + + G+LE+GK +H + KS F+G
Sbjct: 505 ELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAAS 564
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
V N L+ MY KCG ++DA++VF+++ ++ SW ++SG NG L F++M+
Sbjct: 565 VLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKE 624
Query: 220 VEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEA 278
EPD TF G +F+ MK+ Y I P EHY+ ++ ILG AG+L EA
Sbjct: 625 TEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEA 684
Query: 279 EEFVEKMPLELGVDIWQALRNFARIHGDIDL-EDRAEELLIGFDPSKASADKLPT----- 332
VE M L+ I++ L R G++ L ED A + L PS + L
Sbjct: 685 TGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGL-ALAPSDPALYILLADLYDE 743
Query: 333 --PPRKKQSAINMLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDI 390
P Q N++ EK + S EV K+ + + V T + +I
Sbjct: 744 SGKPELAQKTRNLMTEKRLSKKLGKSTV---EVQGKVHSFVSE--DVTRVDKTNGIYAEI 798
Query: 391 DEEEKE-----------KALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKI 439
+ ++E + +HS + A+ YG I P + ++KN +C DCH + I
Sbjct: 799 ESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSI 858
Query: 440 MSKIVGRELIVRDNKRFHHFKDGKCSC 466
++++V +++ VRD + H FK+G+CSC
Sbjct: 859 LTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 86 QDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRV 145
QD S + + +L + + LE+ G ++ Y A+L LC SL+ GK++
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 146 HEFLKKSSFNGEVEVNNRLIGMYGKCGGMK-DARRVFDKMPERNLSSWCLMISGYTVNGR 204
H K F +V N L+ MY KC + +A RVF M N+ SW +I G +G
Sbjct: 348 HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGF 407
Query: 205 GDDGLLVFQQMKQAGVEPDGETF 227
D + +M + VEP+ T
Sbjct: 408 VQDCFGLLMEMVKREVEPNVVTL 430
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 88 TPFAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHE 147
+ F S A +SL EE +M G + + ++++ C + G RVH
Sbjct: 97 SAFTKSQEFASALSLFEE--------MMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 148 FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
+ K+ F G V + L +Y KCG K+A +F + + SW +MIS + +
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208
Query: 208 GLLVFQQMKQAGVEPDGETF 227
L + +M +AGV P+ TF
Sbjct: 209 ALQFYSEMVKAGVPPNEFTF 228
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
+L CE S S G +H + K +++ N L+ +Y K G+ +AR++FD+M R
Sbjct: 30 ILSFCE-SNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ +W +MIS +T + L +F++M +G P+ TF
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTF 127
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 84 QNQDTPFAASSSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSL 139
QN DT S + SL K +AL E++ G + ++ LL G L
Sbjct: 186 QNADTI----SWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-L 240
Query: 140 ESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGY 199
E GK +H + V + L+ Y + M+DA RV + E+++ W ++SG+
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF 300
Query: 200 TVNGRGDDGLLVFQQMKQAGVEPDGETF 227
N R + + F +M+ G++P+ T+
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTY 328
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 198/423 (46%), Gaps = 29/423 (6%)
Query: 76 LKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVA----DSSVYLALLK 131
+ L Q + ++ ++ N + + GK ++ALEL + +S L+LL
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 132 LCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSS 191
C + + + +H + + + + V N L Y K G ++ +R +F M +++ +
Sbjct: 533 ACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIIT 592
Query: 192 WCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM- 250
W +I GY ++G L +F QMK G+ P+ T G F S+
Sbjct: 593 WNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIA 652
Query: 251 KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLE 310
+Y I P EH ++ + G A +L EA +F+++M ++ IW++ RIHGDID+
Sbjct: 653 NDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMA 712
Query: 311 DRAEELLIGFDPSKASADKLPT----------------PPR-----KKQSAINMLEEKNR 349
A E L +P + + + + PR KK + +E +N
Sbjct: 713 IHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNL 772
Query: 350 VAEYRCSIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIA 409
+ + K + L L ++ D I+EE +E+ HSE+ A+A
Sbjct: 773 IHTFTTGDQSK-LCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMA 831
Query: 410 YGLIST--PPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCG 467
+GLIS+ +TT+RI+KNLR+C DCH+ K +SK G ++++ D + HHFK+G CSC
Sbjct: 832 FGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCK 891
Query: 468 DYW 470
DYW
Sbjct: 892 DYW 894
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 102 LCEEGKLNQALE----LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
LC G L +A + L G+ S YL LL+ C DSGS+ G+ +H + +
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFT-EPD 114
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
V V +L+ MY KCG + DAR+VFD M ERNL +W MI Y+ R + +F+ M +
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 218 AGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNE 277
GV PD F G + + + G++ C ++ + G+L+
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 278 AEEFVEKMPLELGVDIWQAL 297
A +F +M E V W ++
Sbjct: 235 ATKFFRRMR-ERDVIAWNSV 253
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
+M G + D ++ +L+ C + G +E+GK +H + K + + V+N ++ +Y KCG
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXX 233
+ A + F +M ER++ +W ++ Y NG+ ++ + + ++M++ G+ P T+
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 234 XXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPL 287
+ M+ +GI + +I+ L + G +A + KM L
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 94 SSNADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
+ A + L G QAL++ G V ++ ++ + C + G VH
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIA 378
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
K F +V V N L+ MY KCG ++DAR+VFD + +++ +W MI+GY G
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAY 438
Query: 210 LVFQQMKQAGVEPDGETF 227
+F +M+ A + P+ T+
Sbjct: 439 ELFTRMQDANLRPNIITW 456
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 119/203 (58%), Gaps = 1/203 (0%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
LL+ C + SL+ G +VH + K+ E + N LI MY KCG + ARR+FD M R+
Sbjct: 479 LLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRD 538
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFE 248
+ SW +I GY +G G++ L++F++MK AG+EP+ TF G +
Sbjct: 539 VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA 598
Query: 249 SMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDI 307
+M+ E+GI+P +EH V+++L AG+LNEAE F+++M LE V +W+ L + + G++
Sbjct: 599 TMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNV 658
Query: 308 DLEDRAEELLIGFDPSKASADKL 330
L +A E ++ DP ++A L
Sbjct: 659 HLAQKAAENILKIDPFNSTAHVL 681
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 96 NADLMSLCEEGKLNQALELMGHGAVADS-----SVYLALLKLCEDSGSLESGKRVHEFLK 150
N + SLC+ +ALE S Y++L+ C S SL G+++H+ +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 151 KSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLL 210
S+ + +NN ++ MYGKCG ++DAR VFD MPERNL S+ +I+GY+ NG+G + +
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 211 VFQQMKQAGVEPDGETF 227
++ +M Q + PD F
Sbjct: 155 LYLKMLQEDLVPDQFAF 171
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
++ + LK C + G ++H KS G L MY +CG + ARRVFD++
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
+ +SW ++I+G NG D+ + VF QM+ +G PD
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDA 371
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%)
Query: 112 LELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKC 171
L+++ V D + +++K C S + GK++H + K + + N LI MY +
Sbjct: 157 LKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRF 216
Query: 172 GGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
M DA RVF +P ++L SW +I+G++ G + L ++M GV
Sbjct: 217 NQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 155/323 (47%), Gaps = 29/323 (8%)
Query: 94 SSNADLMSLCEEGKLNQALE----LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S L+ L + G +A++ ++ G D++V A+L + SL GK++H +
Sbjct: 324 SMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLV 383
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
K F+G VNN LI MY KCG + D++ VF +MP+RN SW MI+ + +G G L
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAAL 443
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINI 268
++++M V+P TF G MKE +GI P EHY +I++
Sbjct: 444 KLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDM 503
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA- 327
LG AG L EA+ F++ +PL+ IWQAL HGD ++ + A E L P +SA
Sbjct: 504 LGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAH 563
Query: 328 --------------DKLPTPPR------KKQSAINMLEEKNRVAEYRCSI---PYKEEVN 364
++ T R K++ I+ +E +++ + P E +
Sbjct: 564 ILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIY 623
Query: 365 EKLKGLSGQLREAGYVPDTRYVL 387
+ L GL + + GY PD R++L
Sbjct: 624 DVLSGLFPVMVDEGYRPDKRFIL 646
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 112 LELMGHGAVADSSV-YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGK 170
LM G V +SV YL+ L C S + G+++H L K E+ + + L+ MY K
Sbjct: 244 FSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSK 303
Query: 171 CGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
CG ++DA +F+ E + S +++ G NG ++ + F +M QAGVE D
Sbjct: 304 CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA 357
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
++G G D + +L +C+ K +H S ++ E+ V N+LI Y KCG
Sbjct: 147 MLGSGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
R VFD M RN+ + +ISG N +DGL +F M++ V P+ T+
Sbjct: 206 SVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTY 259
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 110/201 (54%), Gaps = 1/201 (0%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
A+L C GSL GK VH ++ ++ + I MY +CG ++ AR VFD MPER
Sbjct: 317 AILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER 376
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF 247
N+ SW MI+ + +NG ++ L F +MK V P+ TF G+ F
Sbjct: 377 NVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQF 436
Query: 248 ESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGD 306
ESM ++YG+ P EHY ++++LG AG++ EA+ F++ MP++ W AL + RIH +
Sbjct: 437 ESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKE 496
Query: 307 IDLEDRAEELLIGFDPSKASA 327
+DL E L+ +P K+S
Sbjct: 497 VDLAGEIAEKLLSMEPEKSSV 517
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE-VNNRLIGMYGKCGGMKD 176
G D+ + L+K C + + + GK VH + SF + + + +I MY KC + +
Sbjct: 205 GLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDN 264
Query: 177 ARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXX 236
AR++F+ +RN+ W +ISG+ R + +F+QM + + P+ T
Sbjct: 265 ARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSS 324
Query: 237 XXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQA 296
G M GI ++ I++ G + A + MP E V W +
Sbjct: 325 LGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSS 383
Query: 297 LRNFARIHG 305
+ N I+G
Sbjct: 384 MINAFGING 392
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 121 ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
DS + +K C G LE+G +H K+ + + V L+ MY + G M+ A++V
Sbjct: 107 VDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV 166
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
FD++P RN W +++ GY + + +F M+ G+ D T
Sbjct: 167 FDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTL 213
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 124 SVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK 183
S + +++ C S E G++VH + KS +++ + L+ MY KCGG+ DARRVFD+
Sbjct: 274 STFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQ 333
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXG 243
M E+N+ SW MI GY NG ++ L +F +MK+ +EP+ TF G
Sbjct: 334 MQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKG 393
Query: 244 FMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFAR 302
+ FESM ++Y + P EHY +++++G AG LN+A EF MP DIW AL +
Sbjct: 394 YEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCN 453
Query: 303 IHGDIDLEDRAEELLIGFDPSKASADKLP 331
+HG+++L A L K +ADK P
Sbjct: 454 LHGNVELASIAASELF-----KLNADKRP 477
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 58/88 (65%)
Query: 140 ESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGY 199
++GK++H + K+ F ++ ++ +L+ ++ KCG + AR+VFD++P+ LS++ MISGY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 200 TVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+G + LL+ Q+M +G + DG T
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTL 138
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 116/211 (54%), Gaps = 1/211 (0%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
+++ G D++ +++L C +SG L G R+H LK+S+ V N L+ MY KCG
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
+K A VF+ +P+++L SW M+ G V+G G + + +F +M++ G+ PD TF
Sbjct: 365 NLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLC 424
Query: 233 XXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
G +F SM K Y + P EHY ++++LG G+L EA + V+ MP+E V
Sbjct: 425 SCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNV 484
Query: 292 DIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
IW AL R+H ++D+ + L+ DP
Sbjct: 485 VIWGALLGACRMHNEVDIAKEVLDNLVKLDP 515
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 75/177 (42%), Gaps = 10/177 (5%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G AD+ Y LLK C L K +H ++K + ++ V N LI Y +CG
Sbjct: 107 EMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCG 166
Query: 173 GM--KDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXX 230
G+ +DA ++F+KM ER+ SW M+ G G D +F +M Q D ++
Sbjct: 167 GLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTM 222
Query: 231 XXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPL 287
F FE M E + ++ AG + A +KMPL
Sbjct: 223 LDGYARCREMSKAFELFEKMPERNTV----SWSTMVMGYSKAGDMEMARVMFDKMPL 275
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D LA+L C D GSLE G+R+ ++ N V +NN +I MY K G + A VF
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF 308
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
+ + ERN+ +W +I+G +G G + L +F +M +AGV P+ TF
Sbjct: 309 ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVD 368
Query: 242 XGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNF 300
G F SM+ +YGI P EHY +I++LG AG+L EA+E ++ MP + IW +L
Sbjct: 369 LGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
Query: 301 ARIHGDIDLEDRAEELLIGFDPSKA 325
+ +H D++L +RA LI +P+ +
Sbjct: 429 SNVHHDLELGERALSELIKLEPNNS 453
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 14/120 (11%)
Query: 117 HGAVA----DSSVYLA--LLKLCEDSGSLESGKRVH-EFLKKSSFNGEVEVNNRLIGMYG 169
HG V DSSV++ L+++ G L +++ E L K +V V N L+ YG
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK-----DVNVWNALLAGYG 193
Query: 170 KCGGMKDARRVFDKMP--ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
K G M +AR + + MP RN SW +ISGY +GR + + VFQ+M VEPD T
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 1/205 (0%)
Query: 120 VADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR 179
V D + ++ + C LE GKR H + K + V++ L+ MY KC D R
Sbjct: 206 VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHR 265
Query: 180 VFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXX 239
VFD++ RN+ +W +ISGY +G+ + L F++MK+ G P+ TF
Sbjct: 266 VFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGL 325
Query: 240 XXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALR 298
G+ HF SMK +YGI P +HY +++ LG AG+L EA EFV K P + +W +L
Sbjct: 326 VDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
Query: 299 NFARIHGDIDLEDRAEELLIGFDPS 323
RIHG++ L + A + DP+
Sbjct: 386 GACRIHGNVKLLELAATKFLELDPT 410
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 99 LMSLCEEGKLNQALELM-GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
L LC G+L +A+ L+ G + Y LL+ C+ GKR+H + F
Sbjct: 83 LKGLCVTGRLKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALN 142
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
+ +L+ +Y G ++ A +F + R+L W MISGY G +GL ++ M+Q
Sbjct: 143 EYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ 202
Query: 218 AGVEPDGETF 227
+ PD TF
Sbjct: 203 NRIVPDQYTF 212
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 113/211 (53%), Gaps = 1/211 (0%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G + + ++LK C +LE GK+VH K F EV + + L MY KCG ++D
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
VF + P +++ SW MISG + NG+GD+ L +F++M G+EPD TF
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 238 XXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQA 296
G+ +F M + G+ P +HY ++++L AGQL EA+EF+E ++ G+ +W+
Sbjct: 538 GFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRI 597
Query: 297 LRNFARIHGDIDLEDRAEELLIGFDPSKASA 327
L + + HG +L A E L+ ++S
Sbjct: 598 LLSACKNHGKCELGVYAGEKLMALGSRESST 628
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
+ +L C D LE GK++H FL K F + L+ MY K G + DAR+ FD + E
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
R+++ W +ISGY N ++ L+++++MK AG+ P+ T
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
G++ H + K S G++ V+ L+GMY K G ++D +VF MPERN +W M+SGY
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 202 NGRGDDGLLVFQQM---KQAGVEPD 223
GR ++ + VF K+ G + D
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSD 221
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
V+ A+L + + G+++H K+ G V ++N L+ MY KC + +A ++FD
Sbjct: 223 VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSS 282
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+RN +W M++GY+ NG + + +F +M AG++P T
Sbjct: 283 GDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI 325
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 133/297 (44%), Gaps = 26/297 (8%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G D A L C + S GK +H F+ K S +V + LI MY KCG +K A
Sbjct: 537 GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM-KQAGVEPDGETFXXXXXXXXX 236
VF M E+N+ SW +I+ +G+ D L +F +M +++G+ PD TF
Sbjct: 597 MNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCH 656
Query: 237 XXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQ 295
G F SM E YGI P +EHY V+++ G AG+L EA E V+ MP +W
Sbjct: 657 VGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWG 716
Query: 296 ALRNFARIHGDIDLEDRAEELLIGFDPSKA-----------------SADKLPTPPRKKQ 338
L R+H +++L + A L+ DPS + S K+ + ++++
Sbjct: 717 TLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKERE 776
Query: 339 -------SAINMLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLH 388
S I + + + + P + L L G+LR GY+P LH
Sbjct: 777 VQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
+L +C ++ G ++H + S + E + N L+ MY KCG DA ++F M
Sbjct: 244 CVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA 303
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ +W MISGY +G ++ L F +M +GV PD TF
Sbjct: 304 DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITF 343
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER- 187
LL+ C + L GK+VH FL +S +G+ + R++GMY CG D ++F ++ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 188 -NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
++ W +IS + NG + L + +M GV PD TF
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTF 141
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRL 164
E L E++ G + D+ + +LL +LE K++H ++ + S + ++ + + L
Sbjct: 322 EESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSAL 381
Query: 165 IGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
I Y KC G+ A+ +F + ++ + MISGY NG D L +F+ + + + P+
Sbjct: 382 IDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNE 441
Query: 225 ETF 227
T
Sbjct: 442 ITL 444
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 138 SLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMIS 197
+L+ G+ +H F+ K F+ + +I MY KCG M A +F+++ +R++ SW MI+
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT 515
Query: 198 GYTVNGRGDDGLLVFQQMKQAGVEPD 223
+ + +F+QM +G+ D
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYD 541
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 7/232 (3%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+ +L C SL G++ H + KS + + V L MY KCG + AR+ FD +
Sbjct: 522 FATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVL 581
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFM 245
+N W MI GY NGRGD+ + ++++M +G +PDG TF G
Sbjct: 582 RKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLE 641
Query: 246 HFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIH 304
SM+ +GI P +HY+ +++ LG AG+L +AE+ E P + +W+ L + R+H
Sbjct: 642 ILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVH 701
Query: 305 GDIDLEDRAEELLIGFDPSKASADKLPTPPRKK------QSAINMLEEKNRV 350
GD+ L R E L+ DP ++A L + +A+ L KNRV
Sbjct: 702 GDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRV 753
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 140 ESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGY 199
E GK++H + F G++ +NN L+ +Y K M A +F +MPE N+ SW +MI G+
Sbjct: 266 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGF 325
Query: 200 TVNGRGDDGLLVFQQMKQAGVEPDGET 226
R D + +M+ +G +P+ T
Sbjct: 326 GQEYRSDKSVEFLTRMRDSGFQPNEVT 352
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 126 YLA-LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
YLA LL+ D SGK +H F+ + + + NRL+ +Y +CG AR+VFD+M
Sbjct: 8 YLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEM 67
Query: 185 PERNLSSW 192
R++ SW
Sbjct: 68 SVRDVYSW 75
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + +L C LE GK++H + ++ + + + LI +Y +C M+ + +F
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIF 474
Query: 182 DK-MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
D + E +++ W MISG+ N L++F++M Q V ET
Sbjct: 475 DDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 142/300 (47%), Gaps = 27/300 (9%)
Query: 117 HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKD 176
G V + + +L+ C + +L G+++H + + FN VE+ N LI MY KCG + D
Sbjct: 307 QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPD 366
Query: 177 ARRVFDKMPE-RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXX 235
++RVF ++ + RNL SW M+ GY +G G + + +F +M +G+ PD F
Sbjct: 367 SQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACR 426
Query: 236 XXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIW 294
G +F M+ EYGI P R+ Y V+++LG AG++ EA E VE+MP + W
Sbjct: 427 HAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTW 486
Query: 295 QALRNFARIHGDIDLEDR-AEELLIGFDPSK-----------ASADKLPTPPR------- 335
A+ + H L R A ++ P A+ K R
Sbjct: 487 GAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRM 546
Query: 336 ---KKQSAINMLEEKNRVAEYRCS---IPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHD 389
KK++ ++ + +N+V + S P V L L + REAGYVP+ +++D
Sbjct: 547 MGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVND 606
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 138 SLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMIS 197
S+ +GK++H + K F + V N ++ +Y +CG + +A+ F +M +++L +W +IS
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 198 GYTVNGRGD--DGLLVFQQMKQAGVEPDGETF 227
R D + LL+FQ+ + G P+ TF
Sbjct: 288 ELE---RSDSSEALLMFQRFESQGFVPNCYTF 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E++ G + ++LK C + L G VH + K G + V+N ++ MY C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 173 -GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM--KQAGVEP 222
M+ A +F + +N +W +I+G+T G G GL +++QM + A V P
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP 213
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 1/215 (0%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
++ G DS ++L + SL GK +H + + + + N LI MY KCG
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXX 233
K A +F KM ++L +W LMI GY +G L +F +MK+AG PD TF
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 234 XXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVD 292
G FE MK+ YGI P EHY ++++LG AG L EA F++ MP+E
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 293 IWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA 327
IW L + +R H +++L + E L+ +P + S
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGST 782
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 102 LCEEGKLNQALELMGH------GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFN 155
LC+ GK +AL++ G DS + ++ C +L G +VH + K+
Sbjct: 449 LCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV 508
Query: 156 GEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
V V + LI +Y KCG + A +VF M N+ +W MIS Y+ N + + +F M
Sbjct: 509 LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM 568
Query: 216 KQAGVEPD 223
G+ PD
Sbjct: 569 LSQGIFPD 576
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
NA + + E AL+L G + DS ++ C G GK VH L K
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
+ + L+ +Y KCG DA VF M E+++ +W +ISG NG+ + L V
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 212 FQQMK--QAGVEPDGE 225
F MK ++PD +
Sbjct: 462 FGDMKDDDDSLKPDSD 477
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 87 DTPFAASSSNADLMSLCEEGKLNQALELMG-HGAVAD--SSVYL--ALLKLCEDSGSLES 141
D+ + +S N+ + +L ++G+ QAL L H + +SV+ +LLK C +L
Sbjct: 19 DSYISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSY 78
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE-------RNLSSWCL 194
GK +H + + + + L+ MY KCG + A +VFD + R+++ W
Sbjct: 79 GKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNS 138
Query: 195 MISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
MI GY R +G+ F++M GV PD
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDA 168
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 123 SSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFD 182
S+ + L C S + G+++H + K + + V L+ MY KCG + +A VF
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS 331
Query: 183 KMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ ++ L W M++ Y N G L +F M+Q V PD T
Sbjct: 332 CVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTL 376
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
+AL+K C + G G H ++ K++ V LI +Y KCG + AR+VFD+M +
Sbjct: 220 VALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ 279
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMH 246
R++S + MI G V+G G +G+ +++ + G+ PD TF G
Sbjct: 280 RDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQI 339
Query: 247 FESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
F SMK YGI P EHY ++++LG +G+L EAEE ++KMP++ +W++ ++ HG
Sbjct: 340 FNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Query: 306 DIDLEDRAEELLIGFD 321
D + + A + L+G +
Sbjct: 400 DFERGEIALKHLLGLE 415
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 122/236 (51%), Gaps = 7/236 (2%)
Query: 94 SSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLAL-LKLCEDSGSLESGKRVHEF 148
S N + + G++++ L ++ G+V + + L L C G+ + GK VH++
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 149 LKKSSFNG-EVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
+ +N +V V N LI MYGKCG ++ A VF + R+L SW MI+G +G G +
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 208 GLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVI 266
L +F +MK +G+ PD TF G +F SM ++ I P EH V+
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 267 NILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
++L AG L +A EF+ KMP++ IW L ++++ +D+ + A E LI +P
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEP 389
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG-V 220
N ++ Y G M+ RVFD MPERN+ SW +I GY NGR + L F++M G V
Sbjct: 125 NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSV 184
Query: 221 EPDGET 226
P+ T
Sbjct: 185 VPNDAT 190
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 142/304 (46%), Gaps = 16/304 (5%)
Query: 94 SSNADLMSLCEEGKLNQALE----LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N+ + +L E GKLN E ++G D + + LL C G+L GK VH +
Sbjct: 181 SWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLGKLVHSQV 238
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+ L+ MY K GG++ AR VF++M ++N+ +W MI G G ++ L
Sbjct: 239 MVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEAL 298
Query: 210 LVF-QQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVIN 267
+F + MK++ V P+ TF G+ +F M K + I P HY +++
Sbjct: 299 QLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVD 358
Query: 268 ILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEEL---LIGFDPSK 324
ILG AG+LNEA +F++KMP E +W+ L + IH D D E E++ LI +P K
Sbjct: 359 ILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEP-K 417
Query: 325 ASADKLPTPPRKKQSAINMLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLRE--AGYVPD 382
S + + R ++ M E V K+ E L G +GY P
Sbjct: 418 RSGNLVIVANRFAEA--RMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPR 475
Query: 383 TRYV 386
+ YV
Sbjct: 476 SEYV 479
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 58 HKAPHLQKANNNTSIEPKLKLDQSVHQNQDTPFA------ASSSNADLMSLCEEG----- 106
H HL N++ I +L S+ +D FA +S S ++ G
Sbjct: 33 HGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSD 92
Query: 107 ----KLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNN 162
+ E+ G + + LLK C L +G+++ + K F+ +V V N
Sbjct: 93 SPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGN 152
Query: 163 RLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEP 222
LI +YG C DAR+VFD+M ERN+ SW +++ NG+ + F +M P
Sbjct: 153 NLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCP 212
Query: 223 DGET 226
D T
Sbjct: 213 DETT 216
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 12/232 (5%)
Query: 104 EEGKLNQALEL----MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNG--- 156
E+G +++AL L + G D L+L+ C GSLE+GK + ++ G
Sbjct: 334 EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID---ARADIYGCKR 390
Query: 157 -EVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
V + N LI MY KCG + +AR +FD PE+ + +W MI+GY +NG + L +F +M
Sbjct: 391 DNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM 450
Query: 216 KQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQ 274
+P+ TF G+ +F MK+ Y I+P +HY ++++LG G+
Sbjct: 451 IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGK 510
Query: 275 LNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKAS 326
L EA E + M + IW AL N +IH ++ + ++A E L +P A+
Sbjct: 511 LEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAA 562
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D S ++ L C++ +L G+ +H + ++E N I MY K AR +F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
D M R SW +MISGY G D+ L +F M ++G +PD T
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 131 KLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS 190
K C + + VH L KS F +V V + M+ KC + A +VF++MPER+ +
Sbjct: 60 KACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDAT 119
Query: 191 SWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
+W M+SG+ +G D +F++M+ + PD T
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVT 155
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 92 ASSSNADLMSLCEEGKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHE 147
A++ NA L C+ G ++A L + DS + L++ SL+ + +H
Sbjct: 118 ATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHA 177
Query: 148 FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP--ERNLSSWCLMISGYTVNGRG 205
+ + +V V N I YGKCG + A+ VF+ + +R + SW M Y+V G
Sbjct: 178 VGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA 237
Query: 206 DDGLLVFQQMKQAGVEPDGETF 227
D ++ M + +PD TF
Sbjct: 238 FDAFGLYCLMLREEFKPDLSTF 259
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 117/244 (47%), Gaps = 10/244 (4%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
EL+ G AD + +LK+C SL GK++H K + E L+ MY KCG
Sbjct: 433 ELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCG 492
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
+ + +FD M ER++ SW +I G+ NGR ++ F +M G+EP+ TF
Sbjct: 493 EIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLS 552
Query: 233 XXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
E+MK EYG+ P EHY V+++LG AG EA E + KMPLE
Sbjct: 553 ACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDK 612
Query: 292 DIWQALRNFARIHGDIDLEDR-AEELLIGF--DPSKASADKLPTPPRKKQSAINMLEEKN 348
IW +L H + L AE+LL GF DPS + T + + M ++ +
Sbjct: 613 TIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPS------VYTSLSNAYATLGMWDQLS 666
Query: 349 RVAE 352
+V E
Sbjct: 667 KVRE 670
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 66 ANNNTSIEPKLKLDQSVHQNQDTPFAASSSNADLM--SLCEEGKLNQALELM-----GHG 118
ANN S+ +L H+ D + M +GK N+A+EL
Sbjct: 43 ANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEE 102
Query: 119 AVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDAR 178
A+ +Y A+LK C G ++ G V+E + K + G+V + N ++ MY K G + +A
Sbjct: 103 EAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEAN 162
Query: 179 RVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
F ++ + +SW +ISGY G D+ + +F +M Q V
Sbjct: 163 SSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNV 204
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 120 VADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR 179
V D + A L+ C + + G+ + + K + V + N +I MY + DA +
Sbjct: 2 VMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHK 61
Query: 180 VFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
VFD+M ERN+ +W M+SGYT +G+ + + ++++M
Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G + D + ++ +L++C SL G+ +H + + + + +N LI MY KCG
Sbjct: 722 EMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCG 781
Query: 173 GMKDARRVFDKMPER-NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXX 231
MK + +VFD+M R N+ SW +I+GY NG +D L +F M+Q+ + PD TF
Sbjct: 782 DMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVL 841
Query: 232 XXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELG 290
G FE M +YGI +H ++++LG G L EA++F+E L+
Sbjct: 842 TACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPD 901
Query: 291 VDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA 327
+W +L RIHGD + + E LI +P +SA
Sbjct: 902 ARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSA 938
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G V+D + + LK C L GK+VH K + ++ + LI MY KCG +KDA
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
R+VF +PE ++ S +I+GY+ N ++ +++FQ+M GV P TF
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITF 632
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 72 IEPKLKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELM----GHGAVADSSVYL 127
+E K+ +++ + D + NA + G+ ++ +EL G D +
Sbjct: 378 MEAAAKVFEALEEKNDVFW-----NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFT 432
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
+LL C S LE G + H + K + V N L+ MY KCG ++DAR++F++M +R
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR 492
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
+ +W +I Y + + +F++M G+ DG
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
+L C ++E G+++H + K L+ MY KC + DARRVF+ + + N
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
W + SGY G ++ +LVF++M+ G PD F
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF 264
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 137 GSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMI 196
+L+ G VH K + V + L+ MY KC M+ A +VF+ + E+N W MI
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 197 SGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
GY NG + +F MK +G D TF
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE-VNNRLIGMYGKC 171
E++ G + +++ C SL G + H + K F+ E E + L+GMY
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678
Query: 172 GGMKDARRVFDKMPE-RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
GM +A +F ++ +++ W M+SG++ NG ++ L +++M+ GV PD TF
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATF 735
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 7/204 (3%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSF---NGE---VEVNNRLIGMYGKCGGMKDARRVFD 182
+LK C D L G + H + K F +GE + V N LI MY KCG +++ VF
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 183 KMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXX 242
KM ER+ SW MI G+ NG G++ L +F++M ++G +PD T
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 243 GFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFA 301
G +F SM +++G+AP R+HY ++++LG AG L EA+ +E+MP++ IW +L
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Query: 302 RIHGDIDLEDRAEELLIGFDPSKA 325
++H +I L E L+ +PS +
Sbjct: 572 KVHRNITLGKYVAEKLLEVEPSNS 595
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Query: 103 CEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNN 162
CEE A+ + G V + + ++L C + G +VH + KS F +V + +
Sbjct: 133 CEEALCYFAM-MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGS 191
Query: 163 RLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEP 222
L+ MY KCG + DA+RVFD+M +RN+ SW +I+ + NG + L VFQ M ++ VEP
Sbjct: 192 ALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEP 251
Query: 223 DGETF 227
D T
Sbjct: 252 DEVTL 256
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 119 AVADSSVYLALLKLCEDSG-SLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
+ DSS + LL C S S + VH + KS F+ E+ + NRLI Y KCG ++D
Sbjct: 15 SFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDG 74
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
R+VFDKMP+RN+ +W +++G T G D+ +F+ M E D T+
Sbjct: 75 RQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWNSMVSGFAQH 130
Query: 238 XXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLN---EAEEFVEKMPLELGVDIW 294
+F M + G + V++ +N + + K P V I
Sbjct: 131 DRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIG 190
Query: 295 QALRNFARIHGDIDLEDRA 313
AL + G+++ R
Sbjct: 191 SALVDMYSKCGNVNDAQRV 209
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 33/150 (22%)
Query: 111 ALELMGHGAVADSSVYLA-LLKLCEDSGSLESGKRVH-EFLKKSSFNGEVEVNNRLIGMY 168
++M V V LA ++ C +++ G+ VH +K ++ ++N + MY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 169 GKCGGMKDARRVFDKMP-------------------------------ERNLSSWCLMIS 197
KC +K+AR +FD MP ERN+ SW +I+
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 198 GYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
GYT NG ++ L +F +K+ V P +F
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSF 389
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 142/313 (45%), Gaps = 29/313 (9%)
Query: 106 GKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVN 161
G N++LE+ G + D +++L C GSLE G+ + ++ K+ +V V
Sbjct: 347 GCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVG 406
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
N LI MY KCG + A++VF M +R+ +W M+ G NG+G + + VF QM+ ++
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Query: 222 PDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEE 280
PD T+ F M+ ++ I P HY ++++LG AG + EA E
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 281 FVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA------------- 327
+ KMP+ +W AL +R+H D + + A + ++ +P +
Sbjct: 527 ILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKR 586
Query: 328 --------DKLPTPPRKKQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQLRE 376
K+ KK +++E E+ S EE+ KL+ L+ +
Sbjct: 587 WKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTF 646
Query: 377 AGYVPDTRYVLHD 389
A Y+PDT +L +
Sbjct: 647 AAYLPDTSELLFE 659
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 103 CEEGKLNQALELMGHGAVADSSVYLALLK-LCEDSGSLESGKRVHEFLKKSSFNGEVEVN 161
C+ + L ++ G DS + LL L D G+L GK++H + K + V
Sbjct: 114 CDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQ 173
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
N L+ MY CG M AR VFD+ + ++ SW LMISGY ++ + + +M++ V
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVS 233
Query: 222 PDGETF 227
P T
Sbjct: 234 PTSVTL 239
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 32/144 (22%)
Query: 115 MGHGAVADSSVYLAL-LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
M V+ +SV L L L C + KRVHE++ + + + N L+ Y CG
Sbjct: 227 MERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGE 286
Query: 174 M-------------------------------KDARRVFDKMPERNLSSWCLMISGYTVN 202
M K AR FD+MP R+ SW +MI GY
Sbjct: 287 MDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA 346
Query: 203 GRGDDGLLVFQQMKQAGVEPDGET 226
G ++ L +F++M+ AG+ PD T
Sbjct: 347 GCFNESLEIFREMQSAGMIPDEFT 370
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 112/200 (56%), Gaps = 4/200 (2%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
+ +L C +G+L+ K +H F + + +V V+N L+ +YGKCG +++A VF +
Sbjct: 264 VCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASK 323
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG---VEPDGETFXXXXXXXXXXXXXXXG 243
++L++W MI+ + ++GR ++ + VF++M + ++PD TF G
Sbjct: 324 KSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKG 383
Query: 244 FMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFAR 302
+F+ M +GI P EHY +I++LG AG+ +EA E + M ++ IW +L N +
Sbjct: 384 RGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACK 443
Query: 303 IHGDIDLEDRAEELLIGFDP 322
IHG +DL + A + L+ +P
Sbjct: 444 IHGHLDLAEVAVKNLVALNP 463
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGK-CGGMKDARRVFDK 183
+Y +LK S S VH L KS F+ V V L+ Y + AR++FD+
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDE 187
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
M ERN+ SW M+SGY +G + + +F+ M + V
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDV 224
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 2/219 (0%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
+M G D Y +L C + S GK++H + K +V + + L+ MY KCG
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 653
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXX 233
+ D+R +F+K R+ +W MI GY +G+G++ + +F++M ++P+ TF
Sbjct: 654 LHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 713
Query: 234 XXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVD 292
G +F MK +YG+ P HY +++ILG +G++ A E + +MP E
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 773
Query: 293 IWQALRNFARIH-GDIDLEDRAEELLIGFDPSKASADKL 330
IW+ L IH ++++ + A L+ DP +SA L
Sbjct: 774 IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTL 812
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
LM G D + + C L G +++ KSS + +V V N I MYGKC
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXX 233
+ +A RVFD+M R+ SW +I+ + NG+G + L +F M ++ +EPD TF
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 234 XXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEE 280
+H S+ + G+A +I++ G + EAE+
Sbjct: 493 CTGGSLGYGMEIH-SSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 77 KLDQSVHQNQDTPFAASSSNADLMSLCEEGKL-NQAL----ELMGHGAVADSSVYLALLK 131
+ +S+ Q P S S + +++ C + L + AL E+ A S+Y ++L+
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 132 LCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSS 191
C L G ++H KS F + V + MY KC M+DA+ +FD N S
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 192 WCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+ MI+GY+ G LL+F ++ +G+ D
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFD 381
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + ++LK C GSL G +H + KS V LI MY KCG +++A ++
Sbjct: 482 DEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 540
Query: 182 DKMPER-NLS-------------------SWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
+ +R N+S SW +ISGY + + +D ++F +M + G+
Sbjct: 541 SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Query: 222 PDGETF 227
PD T+
Sbjct: 601 PDKFTY 606
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 53/130 (40%), Gaps = 31/130 (23%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNG---------EVEVN------------------ 161
+ K C G+LE GK+ H + S F +V N
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 162 ----NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
N++I Y K M A F+ MP R++ SW M+SGY NG + VF M +
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 218 AGVEPDGETF 227
G+E DG TF
Sbjct: 174 EGIEFDGRTF 183
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 1/204 (0%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
+ ALL C SG+L G+ VH + ++N LI MY KCG +KDA R+FD+
Sbjct: 223 TFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQF 282
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQ-QMKQAGVEPDGETFXXXXXXXXXXXXXXXG 243
+++ SW MI+GY +G + +F+ M ++G +PD T+ G
Sbjct: 283 SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEG 342
Query: 244 FMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARI 303
F M E+G+ P HY ++++LG G L EA E +E MP++ IW +L R+
Sbjct: 343 RKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRV 402
Query: 304 HGDIDLEDRAEELLIGFDPSKASA 327
HGD+ RA E + +P A+
Sbjct: 403 HGDVWTGIRAAEERLMLEPDCAAT 426
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
++ C + +G H K F +V + + L+ +Y G +++A +VF++MPERN+
Sbjct: 127 VRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNV 186
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
SW MISG+ R D L ++ +M+++ +P+ TF
Sbjct: 187 VSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 2/199 (1%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
++L C GS++ GK++H F + + V V + L+ MY K G +K A +F + ER
Sbjct: 526 SILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER 585
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF 247
N ++ MI GY +G G+ + +F M+++G++PD TF G F
Sbjct: 586 NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIF 645
Query: 248 ESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV-DIWQALRNFARIHG 305
E M+E Y I P EHY + ++LG G++NEA EFV+ + E + ++W +L ++HG
Sbjct: 646 EEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHG 705
Query: 306 DIDLEDRAEELLIGFDPSK 324
+++L + E L FD K
Sbjct: 706 ELELAETVSERLAKFDKGK 724
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 120 VADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR 179
V+D YL +E G++ H F+ K+ + + N L+ MY +CG + +
Sbjct: 315 VSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFG 374
Query: 180 VFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
VF M ER++ SW MIS + NG D+GL++ +M++ G + D
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKID 418
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 102 LCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVN 161
L +EG L E+ G D ALL + + E GK+ H FL + E +N
Sbjct: 399 LDDEG-LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMN 456
Query: 162 NRLIGMYGKCGGMKDARRVFDK--MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
+ LI MY K G ++ ++++F+ ER+ ++W MISGYT NG + LVF++M +
Sbjct: 457 SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQN 516
Query: 220 VEPDGET 226
+ P+ T
Sbjct: 517 IRPNAVT 523
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKD----- 176
D+ Y + LK C ++ +L++GK VH L + N V+N L+ MY C D
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 177 -ARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
R+VFD M +N+ +W +IS Y GR + F M + V+P +F
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSF 217
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 116/237 (48%), Gaps = 5/237 (2%)
Query: 94 SSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N+ + G+ AL E+ D ++LL C G+ E G+ +HE++
Sbjct: 225 SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYI 284
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
++ F V LI MY KCG +++ VF+ P++ LS W MI G NG + +
Sbjct: 285 VRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAM 344
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINI 268
+F +++++G+EPD +F F MKE Y I P +HY ++N+
Sbjct: 345 DLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNV 404
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKA 325
LG AG L EAE ++ MP+E IW +L + R G++++ RA + L DP +
Sbjct: 405 LGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDET 461
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 106 GKLNQALE-------LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEV 158
G+L QA + ++ G DS + +L + G L R+ FL F +V
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRI--FLGMIGF--DV 192
Query: 159 EVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQA 218
N +I + KCG + A+ +FD+MP+RN SW MISG+ NGR D L +F++M++
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 219 GVEPDGET 226
V+PDG T
Sbjct: 253 DVKPDGFT 260
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 122/243 (50%), Gaps = 6/243 (2%)
Query: 91 AASSSNADLMSLCEEGKLNQALE----LMGHGAVADSSVYLALLKLCEDSGSLESGKRVH 146
A S N + S G +A+E ++ G D + ++L C +LE GK++H
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 147 EFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGD 206
+ +S + + + L+ MY KCG K+A R+F+ +P++++ SW +MIS Y +G+
Sbjct: 434 LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR 493
Query: 207 DGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEV 265
+ L F +M++ G++PDG T G F M+ +YGI P EHY +
Sbjct: 494 EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCM 553
Query: 266 INILGNAGQLNEAEEFVEKMP-LELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSK 324
I+ILG AG+L EA E +++ P ++ L + +H + L DR LL+ P
Sbjct: 554 IDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDD 613
Query: 325 ASA 327
AS
Sbjct: 614 AST 616
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Query: 92 ASSSNADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHE 147
+S N + + G+ +ALEL G G +S + C LE GK +H
Sbjct: 173 VASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHR 232
Query: 148 FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
K F + VN+ L+ MYGKC ++ AR VF KMP ++L +W MI GY G
Sbjct: 233 KCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKS 292
Query: 208 GLLVFQQMKQAGVEPDGETF 227
+ + +M G P T
Sbjct: 293 CVEILNRMIIEGTRPSQTTL 312
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
++L C S +L GK +H ++ +S N ++ VN LI +Y KCG A VF K +
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
SW +MIS Y G + V+ QM GV+PD TF
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 53/82 (64%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
G+ +H + KS + +V V + L+GMY K +++ +VFD+MPER+++SW +IS +
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 202 NGRGDDGLLVFQQMKQAGVEPD 223
+G + L +F +M+ +G EP+
Sbjct: 186 SGEAEKALELFGRMESSGFEPN 207
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 2/199 (1%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP- 185
+++L C + G LE G+R+ + +++ F + V N I MY KCG + A+R+F+++
Sbjct: 219 VSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGN 278
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFM 245
+RNL SW MI +G+ D+ L +F QM + G +PD TF G
Sbjct: 279 QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQE 338
Query: 246 HFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIH 304
F+SM+E + I+P EHY +I++LG G+L EA + ++ MP++ +W L H
Sbjct: 339 LFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFH 398
Query: 305 GDIDLEDRAEELLIGFDPS 323
G++++ + A E L +P+
Sbjct: 399 GNVEIAEIASEALFKLEPT 417
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G +DS L+ G+L +RV + + K +V V N +I Y + G MK A
Sbjct: 112 GFESDSFCCTTLITAYAKLGALCCARRVFDEMSKR----DVPVWNAMITGYQRRGDMKAA 167
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM-KQAGVEPDGET 226
+FD MP +N++SW +ISG++ NG + L +F M K V+P+ T
Sbjct: 168 MELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHIT 217
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G D +++L C GSLE GK +H + ++ F + V N LI MY KCG
Sbjct: 231 EMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCG 290
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
+ A ++F +M +++ SW MISGY +G + F +M++A V+P+G TF
Sbjct: 291 VISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLS 350
Query: 233 XXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
G +F+ M++ Y I P EHY +I++L AG+L A E + MP++
Sbjct: 351 ACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDS 410
Query: 292 DIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
IW +L + R G++D+ A + L+ +P
Sbjct: 411 KIWGSLLSSCRTPGNLDVALVAMDHLVELEP 441
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 31/133 (23%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + + K C GS GK+VH L K V N LI MY K + DA +VF
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167
Query: 182 DKMPERN-------------------------------LSSWCLMISGYTVNGRGDDGLL 210
D+M ER+ + SW MISGYT G + +
Sbjct: 168 DEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMD 227
Query: 211 VFQQMKQAGVEPD 223
F++M+ AG+EPD
Sbjct: 228 FFREMQLAGIEPD 240
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRL 164
E LN LEL D + ++ + S++ G+ H L K + N L
Sbjct: 537 EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNAL 596
Query: 165 IGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
+ MY KCG +DA + FD R++ W +IS Y +G G L + ++M G+EP+
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNY 656
Query: 225 ETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEK 284
TF G FE M +GI P EHY+ ++++LG AG+LN+A E +EK
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 285 MPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
MP + +W++L + G+++L + A E+ I DP
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDP 754
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
+LM V D + +L C LE GK++H + + + + N LI Y KCG
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+ A ++F+ MP +N+ SW ++SGY N + + +F M + G++PD
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 144 RVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNG 203
++ FL KS F+ +V V LI Y K G + AR VFD +PE++ +W MISG G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 204 RGDDGLLVFQQMKQAGVEPDG 224
R L +F Q+ + V PDG
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDG 249
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+++LL+ SL K++H + K N ++ + LI +Y C +KD+R VFD+M
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
++L W M +GY ++ L +F +++ + PD TF
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
++N LI +Y + GGM AR+VF+KMPERNL SW M+S +G ++ L+VF +
Sbjct: 81 LSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEF 136
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
++L C +L G +VH + K++ + V N LI MY KC + DAR+VFD
Sbjct: 355 SILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA 414
Query: 188 NLSSWCLMISGYTVNGRG---DDGLLVFQQMKQAGVEPDGETF 227
++ + MI GY+ G + L +F+ M+ + P TF
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTF 457
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + L C G+L+ G +H +++K S + V + L+ MY KCG + +A VF
Sbjct: 388 DEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVF 447
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
+ RN ++ +I G ++G + F +M AG+ PD TF
Sbjct: 448 HGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQ 507
Query: 242 XGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNF 300
G +F MK + + P +HY ++++LG AG L EA+ +E MP+E +W AL
Sbjct: 508 TGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFG 567
Query: 301 ARIHGDIDLEDRAEELLIGFDPSKA 325
R+HG+++L ++A + L+ DPS +
Sbjct: 568 CRMHGNVELGEKAAKKLLELDPSDS 592
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 3/193 (1%)
Query: 113 ELMGHGAV---ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYG 169
+++ HG D Y L K+C D G + + K V+N I M+
Sbjct: 143 QMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFA 202
Query: 170 KCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXX 229
CG M++AR+VFD+ P R+L SW +I+GY G + + V++ M+ GV+PD T
Sbjct: 203 SCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIG 262
Query: 230 XXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLEL 289
G +E +KE G+ ++++ G ++EA + +
Sbjct: 263 LVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT 322
Query: 290 GVDIWQALRNFAR 302
V + +AR
Sbjct: 323 IVSWTTMISGYAR 335
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 31/192 (16%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G D + L+ C G L GK +E++K++ + + N L+ M+ KCG + +A
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNG-------------------------------RGD 206
RR+FD + +R + SW MISGY G RG
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 207 DGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVI 266
D L +FQ+M+ + +PD T G +++Y ++ ++
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLV 431
Query: 267 NILGNAGQLNEA 278
++ G ++EA
Sbjct: 432 DMYAKCGNISEA 443
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 115/215 (53%), Gaps = 2/215 (0%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRL 164
E L L+++ G D +L++++ G + G+ +H ++ K+ F + + L
Sbjct: 299 EEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCAL 358
Query: 165 IGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG-VEPD 223
+ MY K G + A++ F+ + +++ +W ++I G +G G++ L +FQ+M++ G PD
Sbjct: 359 VNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPD 418
Query: 224 GETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFV 282
G T+ G +F M++ +G+ P EHY +++IL AG+ EAE V
Sbjct: 419 GITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLV 478
Query: 283 EKMPLELGVDIWQALRNFARIHGDIDLEDRAEELL 317
+ MP++ V+IW AL N IH +++L DR ++
Sbjct: 479 KTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMV 513
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFN--------GEVEVNNRL 164
E+ +G A+ ++ + LL C + +GK H FL+ F+ V + L
Sbjct: 198 EMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSL 257
Query: 165 IGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
I MY KCG ++ AR +FD MPER L SW +I+GY+ NG ++ L +F M G+ PD
Sbjct: 258 IDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDK 317
Query: 225 ETF 227
TF
Sbjct: 318 VTF 320
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E++ G D + +LK C ++ G VH F+ K+ F + V+ L+ MY CG
Sbjct: 97 EMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCG 156
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+ RVF+ +P+ N+ +W +ISG+ N R D + F++M+ GV+ +
Sbjct: 157 EVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKAN 207
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 1/206 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
+S + ++L L G ++H + K + ++ V N L+ MY KCG DA ++F
Sbjct: 437 NSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
+ E N+ S+ MISGY+ NG G L +F ++ +G EP+G TF
Sbjct: 497 SCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVD 556
Query: 242 XGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNF 300
G+ +F+SMK Y I P +HY ++++LG +G L++A + MP + +W +L +
Sbjct: 557 LGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSA 616
Query: 301 ARIHGDIDLEDRAEELLIGFDPSKAS 326
++ H +DL + A + LI +P A+
Sbjct: 617 SKTHLRVDLAELAAKKLIELEPDSAT 642
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 72 IEPKLKLDQSVHQNQDTPFAASSSNADLMS-LCEEGKLNQALELMGHGAVA--DSSVYLA 128
I+ K L ++ D P + S A +++ G+ ++A L V DS
Sbjct: 123 IKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNV 182
Query: 129 LLKLCEDSGSLESGK-----RVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK 183
LL SG L +GK RV + + EV + ++ Y K G + DAR +FD+
Sbjct: 183 LL-----SGYLRAGKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVDARSLFDR 233
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
M ERN+ +W MI GY G +DG +F +M+Q G
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG 269
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%)
Query: 123 SSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFD 182
S + LL C ++GSLE G+ +H ++ ++ + ++ LI MY KCG ++ +R +FD
Sbjct: 533 SITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD 592
Query: 183 KMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXX 242
+++ W +MISGY ++G + + +F QM+++ V+P G TF
Sbjct: 593 AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQ 652
Query: 243 GFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFAR 302
G F M +Y + P +HY ++++L +G L EAE V MP IW L +
Sbjct: 653 GKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCM 712
Query: 303 IHGDIDLEDRAEELLIGFDP 322
HG+ ++ R E + DP
Sbjct: 713 THGEFEMGIRMAERAVASDP 732
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 129 LLKLCEDSGSLESGKRVHEF-LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
++ C + G VH LK F+ V + Y KCG ++DA VFD+MP+R
Sbjct: 131 VVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDR 190
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
++ +W +ISG+ NG + GL +M AG + D
Sbjct: 191 DVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 21/223 (9%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G DS+ +++ C G++ GK +H ++ K+S + + V N LI +YGK G + A
Sbjct: 428 GIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVA 487
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
R+F + + N+ +W MI+ Y + + + +F +M +P T
Sbjct: 488 WRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNT 546
Query: 238 XXXXXGFMHFESMKEYGIAPCREHYLE------VINILGNAGQLNEAEEFVEKMPLELGV 291
G M + E EH + +I++ G L ++ E + + V
Sbjct: 547 GSLERGQMIHRYITE------TEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAV 600
Query: 292 DIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKLPTPP 334
W + + +HGD+ E + FD + S D PT P
Sbjct: 601 -CWNVMISGYGMHGDV------ESAIALFDQMEES-DVKPTGP 635
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 1/213 (0%)
Query: 119 AVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDAR 178
+A+S +L +C + +L G+ +H + ++S + + V N L+ MY KCG + +
Sbjct: 430 VLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGS 489
Query: 179 RVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXX 238
VF+ + +++L SW +I GY ++G + L +F +M +G PDG
Sbjct: 490 LVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAG 549
Query: 239 XXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
G F SM K +G+ P +EHY ++++LG G L EA E V+ MP+E V + AL
Sbjct: 550 LVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGAL 609
Query: 298 RNFARIHGDIDLEDRAEELLIGFDPSKASADKL 330
N R+H ++D+ + L +P + + L
Sbjct: 610 LNSCRMHKNVDIAEGIASQLSVLEPERTGSYML 642
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 96 NADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N+ L + G ALEL G D + +L+ C G + H + +
Sbjct: 127 NSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ 186
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
+ V N L+ +Y K G M DA +F +MP RN SW +MI G++ + + +
Sbjct: 187 IGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKI 246
Query: 212 FQQMKQAGVEPDGETF 227
F+ M++ +PD T+
Sbjct: 247 FEWMQREEFKPDEVTW 262
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
+C + +L ++VH ++ K F + N LI +YGK G +KDA +F ++ +
Sbjct: 299 VFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNK 358
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
+ SW +I+ + G+ D+ L +F ++++
Sbjct: 359 GIESWNSLITSFVDAGKLDEALSLFSELEE 388
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 16/311 (5%)
Query: 21 SIVSSHLNFASSKPLCNYAAPDKLH--PRRNGTSNSRSAHKAPHLQKANNNTSIEPKLKL 78
S ++ H + C ++ ++H +NG S S H+Q +E KL L
Sbjct: 115 SYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDS-----HVQTGVLRIYVEDKLLL 169
Query: 79 D-----QSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLC 133
D + Q + + L EG L E++ G D L C
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEG-LEVFREMLVKGLEPDEFSVTTALTAC 228
Query: 134 EDSGSLESGKRVHEFLKKSSF-NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSW 192
G+L GK +HEF+KK S+ +V V L+ MY KCG ++ A VF K+ RN+ SW
Sbjct: 229 AQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSW 288
Query: 193 CLMISGYTVNGRGDDGLLVFQQM-KQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK 251
+I GY G + +++ ++ G++PD G E+M+
Sbjct: 289 AALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENME 348
Query: 252 -EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLE 310
Y I P EHY +++++ AG+L++A +EKMP++ +W AL N R H +++L
Sbjct: 349 ARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 311 DRAEELLIGFD 321
+ A + L+ +
Sbjct: 409 ELAVKNLLDLE 419
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 7/236 (2%)
Query: 94 SSNADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S NA + L G+ N+A+E+ G D +++ C G L ++H+ +
Sbjct: 185 SWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCV 244
Query: 150 --KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
K+ ++ + N LI MYGKCG M A +F++M +RN+ SW MI GY NG +
Sbjct: 245 LQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLE 304
Query: 208 GLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVI 266
L F+QM++ GV P+ TF G +F MK E+ + P HY ++
Sbjct: 305 ALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIV 364
Query: 267 NILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
++L GQL EA++ VE+MP++ V +W L GD+++ + ++ +P
Sbjct: 365 DLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEP 420
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
GK +H + F G+ + I +Y K G ++AR+VFD+ PER L SW +I G
Sbjct: 136 GKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 202 NGRGDDGLLVFQQMKQAGVEPDGET 226
GR ++ + +F MK++G+EPD T
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFT 220
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 16/311 (5%)
Query: 21 SIVSSHLNFASSKPLCNYAAPDKLH--PRRNGTSNSRSAHKAPHLQKANNNTSIEPKLKL 78
S ++ H + C ++ ++H +NG S H+Q +E KL
Sbjct: 115 SYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDG-----HVQTGVLRIYVEDKLLF 169
Query: 79 D-----QSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLC 133
D + Q + + L EG L E++ G D L C
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEG-LEVFKEMLVRGIEPDEFSVTTALTAC 228
Query: 134 EDSGSLESGKRVHEFLKKSSF-NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSW 192
G+L GK +HEF+KK + +V V L+ MY KCG ++ A VF+K+ RN+ SW
Sbjct: 229 AQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSW 288
Query: 193 CLMISGYTVNGRGDDGLLVFQQM-KQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK 251
+I GY G ++ ++ G++PD G E+M+
Sbjct: 289 AALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENME 348
Query: 252 -EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLE 310
YGI P EHY +++++ AG+L++A + +EKMP++ +W AL N R H +++L
Sbjct: 349 ARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 311 DRAEELLIGFD 321
+ A + L+ +
Sbjct: 409 ELAVQNLLDLE 419
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 1/213 (0%)
Query: 115 MGHGAVA-DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
MG+ A DS V ++LL C G+L+ GK VH + + + + N + MY KC
Sbjct: 226 MGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSI 285
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXX 233
+ A VF M R++ SW +I GY ++G +F +M + G+EP+ TF
Sbjct: 286 LDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 345
Query: 234 XXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDI 293
+++F M+EY I P +HY V + + AG L EAE+F+E MP++ +
Sbjct: 346 CAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAV 405
Query: 294 WQALRNFARIHGDIDLEDRAEELLIGFDPSKAS 326
A+ + +++G++++ +R LI P KAS
Sbjct: 406 MGAVLSGCKVYGNVEVGERVARELIQLKPRKAS 438
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
+L+ C S +SG +H K F+ + V++ L+ MY G + AR++FD MP R+
Sbjct: 140 ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRD 199
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+ M GY G GL +F++M +G D
Sbjct: 200 SVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALD 234
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
+++ G DS ++LK S G +VH ++ K E V + L+ MY K G
Sbjct: 642 DMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFG 701
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
+ D + F ++ +L +W +I+ Y +G+ ++ L V+ MK+ G +PD TF
Sbjct: 702 SIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
Query: 233 XXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
+ H SM K+YGI P HY+ +++ LG +G+L EAE F+ M ++
Sbjct: 762 ACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDA 821
Query: 292 DIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA 327
+W L +IHG+++L A + I +PS A A
Sbjct: 822 LVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGA 857
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 5/151 (3%)
Query: 78 LDQSVHQNQDTPFAASSSNADLMS-LCEEGKLNQAL----ELMGHGAVADSSVYLALLKL 132
L++S Q PF ++ A ++S E G L +A+ E++ G D S A+L +
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 133 CEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSW 192
C SL GK +H + ++ + +++ + L+ MY KCG +K AR+V+D++PE + S
Sbjct: 561 CSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSC 620
Query: 193 CLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+ISGY+ +G DG L+F+ M +G D
Sbjct: 621 SSLISGYSQHGLIQDGFLLFRDMVMSGFTMD 651
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
DS Y ++L C L GK V + K +V V ++ +Y KCG M +A VF
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
++P ++ SW +M+SGYT + L +F++M+ +GVE + T
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%)
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISG 198
L GK+VH + KS ++ V + L +Y KCG ++++ ++F +P ++ + W MISG
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525
Query: 199 YTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ G + + +F +M G PD T
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTL 554
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 7/210 (3%)
Query: 123 SSVYLALLKLCEDSGSLESGKRVHEFLKKSS--FNGEVEVNNRLIGMYGKCGGMKDARRV 180
+S Y LL + +L+ GK +H + K++ ++ ++ + N L+ MY KCG ++DA +
Sbjct: 466 NSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEI 525
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXX 240
F KM +++ SW MI G + +G D L +F++M +G +P+ TF
Sbjct: 526 FAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLI 585
Query: 241 XXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRN 299
G F++MKE Y I P +HY+ +I++LG AG+L EAEEF+ +P ++ AL
Sbjct: 586 TRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLG 645
Query: 300 FARIHG-DIDLE---DRAEELLIGFDPSKA 325
++ D D E +RA L+ DP A
Sbjct: 646 LCGLNWRDKDAEGIAERAAMRLLELDPVNA 675
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 29/180 (16%)
Query: 77 KLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDS 136
+++++ ++ P S L +LC++G+ A+EL + + L+ +
Sbjct: 123 RMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRN 182
Query: 137 GSLESGKRVHE------------FLKKSSFNGEVEVNNRLIG-------------MYGKC 171
G +E K+V + +K N +E L G +YG C
Sbjct: 183 GDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYC 242
Query: 172 --GGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ--AGVEPDGETF 227
G +++A R+F +MPERN+ SW MISG+ N + L++F +MK+ V P+GET
Sbjct: 243 RYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETL 302
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 1/219 (0%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRL 164
E +N E++ G+ ++ +LL S +L+ GK +H F ++ + + V +
Sbjct: 348 EEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSI 407
Query: 165 IGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
I Y K G + A+RVFD +R+L +W +I+ Y V+G D +F QM+ G +PD
Sbjct: 408 IDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDD 467
Query: 225 ETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVE 283
T F+SM +Y I P EHY ++++L AG+L++A EF+
Sbjct: 468 VTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFIS 527
Query: 284 KMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
KMP++ +W AL N A + GD+++ A + L +P
Sbjct: 528 KMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP 566
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 124 SVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK 183
S L L C+D ++VH F+ + F+ +V V N +I Y KC ++ AR+VFD+
Sbjct: 133 SCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDE 192
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ-AGVEPDGET 226
M ER++ SW MISGY+ +G +D +++ M + +P+G T
Sbjct: 193 MSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT 236
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
+++ + C S L G VH+ + ++ ++ + N +IG Y KCG + AR +FD+M E
Sbjct: 238 ISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSE 297
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
++ ++ +ISGY +G + + +F +M+ G+
Sbjct: 298 KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 3/194 (1%)
Query: 116 GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEV--NNRLIGMYGKCGG 173
G G + + +L +G LE G VH +++K F EV+V L+ MY KCG
Sbjct: 213 GSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGC 272
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXX 233
+ +A VF+ M +N+ +W M +G +NGRG++ + +M ++G++P+ TF
Sbjct: 273 LNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
Query: 234 XXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVD 292
G F+SMK +G+ P EHY ++++LG AG++ EA +F+ MP++
Sbjct: 333 YRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAI 392
Query: 293 IWQALRNFARIHGD 306
+ ++L N I+G+
Sbjct: 393 LLRSLCNACSIYGE 406
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 11/177 (6%)
Query: 139 LESGKRVHEFLKKSSFNGEVE-VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMIS 197
L G+ VH +KK F E E + L+ Y K G ++ AR+VFD+MPER +W MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 198 GYTV-----NGRGDDGLLVFQQMK--QAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM 250
GY N +++F++ +GV P T G + +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 251 KEYGIAPCREHYL--EVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
++ G P + ++ ++++ G LN A E M ++ V W ++ ++G
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLALNG 302
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 15/237 (6%)
Query: 102 LCEEGKLNQALELMGHGA-VADSSVYLALLKLCEDSGSLESGKRVHEF-LKKSSFNGEVE 159
L G+ ++A+ + H ++ ++LL C S L + K H +++S ++
Sbjct: 404 LAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDIS 463
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
V ++ Y KCG ++ ARR FD++ E+N+ SW ++IS Y +NG D L +F +MKQ G
Sbjct: 464 VGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKG 523
Query: 220 VEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAE 279
P+ T+ G M F+SM E P +HY ++++L AG+++ A
Sbjct: 524 YTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAV 583
Query: 280 EFVEKMP--LELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKLPTPP 334
E ++ +P ++ G W A+ + R +R ++L+I S+ A+ L P
Sbjct: 584 ELIKNLPEDVKAGASAWGAILSGCR--------NRFKKLII---TSEVVAEVLELEP 629
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFN-GEVEVNNRLIGMYGKCGGMKDARRV 180
D ++LK C ++ G+ VH F + F+ +V V N LI MY K + A RV
Sbjct: 225 DCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRV 284
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
FD+ RN+ SW +++G+ N R D+ L +F M Q VE D T
Sbjct: 285 FDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVT 330
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
G+++H ++ +S F G V N ++ MY + AR++FD+M ER++ SW ++I Y
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 202 NGRGDDGLLVFQQM-KQAGVEPDGET 226
+ GL +F++M +A EPD T
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVT 228
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 104 EEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE 159
E G ++ + L+ G A+S LA++ C +S L VH + K F +
Sbjct: 330 ETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHIL 389
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
+ N LI MY KCG + AR VF ++ E++L SW MI+ Y ++G G + L +F+ M + G
Sbjct: 390 LGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGG 449
Query: 220 VEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAE 279
E D F F +Y + EHY IN+LG G++++A
Sbjct: 450 HEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAF 509
Query: 280 EFVEKMPLELGVDIWQALRNFARIHGDIDLEDR--AEELLIGFDPSKASADKLPTPPRKK 337
E MP++ IW +L + HG +D+ + A EL+ +P + L + +
Sbjct: 510 EVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKS-EPDNPANYVLLSKIHTE 568
Query: 338 QSAINMLEEKNRVAEYR 354
+ EE RV + R
Sbjct: 569 SGNYHAAEEVRRVMQRR 585
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 101 SLCEEGKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHE--FLKKSSF 154
S C++G L +A++L+ +G + S + +LL LC GS R+ L
Sbjct: 122 SCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERM 181
Query: 155 NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQ 214
V ++ L+ MY K A VFD+M +N SW MISG N + G+ +F+
Sbjct: 182 QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRA 241
Query: 215 MKQAGVEPDGETF 227
M++ + P+ T
Sbjct: 242 MQRENLRPNRVTL 254
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 141/303 (46%), Gaps = 29/303 (9%)
Query: 102 LCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
L ++N+ALEL A+ + +L C D G+LE G+ VH F++
Sbjct: 230 LVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELS 289
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
V N LI MY +CG + +ARRVF M ++++ S+ MISG ++G + + F+ M
Sbjct: 290 NFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVN 349
Query: 218 AGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLN 276
G P+ T G F SMK + + P EHY ++++LG G+L
Sbjct: 350 RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLE 409
Query: 277 EAEEFVEKMPLELGVDIWQALRNFARIHGDIDL-EDRAEELLIGFDPSK----------A 325
EA F+E +P+E + L + +IHG+++L E A+ L +P A
Sbjct: 410 EAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYA 469
Query: 326 SADKLPTPPRKKQS----------AINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSG 372
S+ K ++S + +E N++ E+ + P+KE + ++L+ L+
Sbjct: 470 SSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNR 529
Query: 373 QLR 375
LR
Sbjct: 530 ILR 532
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 90 FAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
F +S +AD +SL ++ + + D+ V ++LK C+ L+ + +H +
Sbjct: 102 FVSSGRSADGVSLYHR--------MIHNSVLPDNYVITSVLKACD----LKVCREIHAQV 149
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
K F V +++ +YGK G + +A+++FD+MP+R+ + +MI+ Y+ G + L
Sbjct: 150 LKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEAL 209
Query: 210 LVFQQMK 216
+FQ +K
Sbjct: 210 ELFQDVK 216
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
++L C G+L G+RVH ++ K+S LI +Y KCG +++A VF+++ E+
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF 247
N+ +W MI+G+ +G D +F M + V P+ TF G F
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 248 ESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGD 306
SMK + + P +HY ++++ G G L EA+ +E+MP+E +W AL +H D
Sbjct: 431 LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKD 490
Query: 307 IDLEDRAEELLIGFDPS 323
+L A +I PS
Sbjct: 491 YELGKYAASRVIKLQPS 507
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 112 LELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHE-FLKKSSFNGEVEVNNRLIGMYGK 170
+E+ G A+ +++LK + G+ VH +L+ +V + + L+ MYGK
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 171 CGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXX 230
C DA++VFD+MP RN+ +W +I+GY + D G+LVF++M ++ V P+ +T
Sbjct: 253 CSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 231 XXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELG 290
G M + I +I++ G L EA E++ E
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKN 371
Query: 291 VDIWQALRNFARIHG 305
V W A+ N HG
Sbjct: 372 VYTWTAMINGFAAHG 386
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 4/156 (2%)
Query: 144 RVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNG 203
+ H + K + + V N LI Y G A R+FD ++++ +W MI G+ NG
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 204 RGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYL 263
+ ++ F +MK+ GV + T G E G C + ++
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKC-DVFI 242
Query: 264 --EVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
++++ G ++A++ ++MP V W AL
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTAL 277
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 8/239 (3%)
Query: 96 NADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL-- 149
+A ++ + G+ N+A E+ D + + L+ C G E ++V +L
Sbjct: 273 SALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQ 332
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+ + F+ V LI M KCG M A ++F++MP+R+L S+C M+ G ++G G + +
Sbjct: 333 RMNKFSSHYVVPA-LIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAI 391
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINI 268
+F++M G+ PD F G +FE M K+Y I +HY ++N+
Sbjct: 392 RLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNL 451
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA 327
L G+L EA E ++ MP E W +L +HG+ ++ + L +P A +
Sbjct: 452 LSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGS 510
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + ++K+C ++G + G VH + + F+ +V V + YGKC + AR+VF
Sbjct: 109 DEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVF 168
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
+MPERN SW ++ Y +G ++ +F M +
Sbjct: 169 GEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPE 204
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 116/234 (49%), Gaps = 10/234 (4%)
Query: 94 SSNADLMSLCEEGKLNQALE---LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLK 150
S N+ L G L++AL+ LM + V A+ + S + G+++H ++
Sbjct: 263 SWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKV--AISSVLARVLSFKHGRQLHGWVI 320
Query: 151 KSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLL 210
+ E+ V N LI +Y K G + A +FD+M ER+ SW +IS ++ N +GL
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLK 377
Query: 211 VFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINIL 269
F+QM +A +PDG TF G F M KEYGI P EHY ++N+
Sbjct: 378 YFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLY 437
Query: 270 GNAGQLNEAEE-FVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
G AG + EA V++M LE G +W AL +HG+ D+ + A + L +P
Sbjct: 438 GRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEP 491
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 88 TPFAASSSNADLMSLCE-EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVH 146
+PFA +S + L + E + ++ G D + +LK C GS++ G+ +H
Sbjct: 159 SPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIH 218
Query: 147 EFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGD 206
L K F +V V N L+ MY KCG + AR VFD +P ++ SW M++GY +G
Sbjct: 219 RDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLH 278
Query: 207 DGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVI 266
+ L +F+ M Q G+EPD F H + + I E L V
Sbjct: 279 EALDIFRLMVQNGIEPD-------KVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 267 NIL----GNAGQLNEAEEFVEKMPLELGVDIWQAL 297
N L GQL +A ++M LE W A+
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAI 365
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 74 PKLKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLC 133
P L QS+H+ Q A S DL + ++G ++ + ++ +LL+ C
Sbjct: 56 PLLIEKQSIHRTQLE--ALDSVITDLETSAQKGI-----------SLTEPEIFASLLETC 102
Query: 134 EDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS--S 191
+++ G RVH + + ++++L+ +Y CG + A VFD+M +R+ S +
Sbjct: 103 YSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFA 162
Query: 192 WCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
W +ISGY G+ +D + ++ QM + GV+PD TF
Sbjct: 163 WNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTF 198
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D+ LL +C + SL G + H ++ + E + N LI MY +CG ++++ VF
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVF 547
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG-VEPDGETFXXXXXXXXXXXXX 240
++M E+++ SW +IS Y+ +G G++ + ++ M+ G V PD TF
Sbjct: 548 NQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLV 607
Query: 241 XXGFMHFESMKEY-GIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELG--VDIWQAL 297
G F SM E+ G+ +H+ ++++LG AG L+EAE V+ +G VD+W AL
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWAL 667
Query: 298 RNFARIHGDIDLEDRAEELLI 318
+ HGD+ L +LL+
Sbjct: 668 FSACAAHGDLKLGKMVAKLLM 688
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK-- 183
+ +L +C D GSL+ GK+VH + K+ F V N LI MY C + DA VF++
Sbjct: 193 FATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETD 251
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ R+ ++ ++I G R D+ LLVF++M +A + P TF
Sbjct: 252 VAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTF 294
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
G +VH K+ + V+N + MY A +VF+ + E++L +W MIS Y
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 202 NGRGDDGLLVFQQMKQAGVEPDGETF 227
G + V+++M GV+PD TF
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTF 392
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 1/177 (0%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G D +A L C + G+L G VH ++ F V V+N LI +Y +CG
Sbjct: 196 EMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCG 255
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
++ AR+VF M +R + SW +I G+ NG + L+ F++M++ G +PD TF
Sbjct: 256 CVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALT 315
Query: 233 XXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLE 288
G +F+ MK +Y I+P EHY ++++ AG+L +A + V+ MP++
Sbjct: 316 ACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 38/178 (21%)
Query: 84 QNQDTPFAASSSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCED--SG 137
NQ T S + + L G+L +A ++ G + ++ALL C D SG
Sbjct: 28 HNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSG 87
Query: 138 SLESGKRVHEFLKKSSFN-GEVEVNNRLIGMYGKCGGMKDAR------------------ 178
S G +H + K + V V +IGMY K G K AR
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 179 -------------RVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
++FDKMPER+L SW MI+G+ G ++ LL F++M+ +GV+PD
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 119/232 (51%), Gaps = 8/232 (3%)
Query: 107 KLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNN 162
+ ++ALEL G D+ V ++LL C +G+LE GK +H ++ ++ + V
Sbjct: 259 RFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGT 318
Query: 163 RLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEP 222
L+ MY KCG ++ A VF ++ ER+ +SW +I G +NG L ++ +M+ GV
Sbjct: 319 ALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRL 378
Query: 223 DGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEF 281
D TF G F SM E + + P EH +I++L AG L+EAEE
Sbjct: 379 DAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEEL 438
Query: 282 VEKM---PLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKL 330
++KM E V ++ +L + AR +G++ + +R E L + S +SA L
Sbjct: 439 IDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTL 490
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
EL G G D+ +LK + G++VH + K+ + V+N L+GMY G
Sbjct: 36 ELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLG 95
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
++ +VFD+MP+R++ SW +IS Y NGR +D + VF++M Q
Sbjct: 96 KIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQ 140
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D ++ L C +LE G+R++ F+ + F V + N L+ M+ KCG + AR VF
Sbjct: 147 DEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVF 205
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQ 214
D M ++N+ W M+ GY GR D+ ++F++
Sbjct: 206 DSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER 238
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 8/209 (3%)
Query: 119 AVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDAR 178
A+ SV+ A+ L GSLE GKR H++L S+ + +I MY KCG ++ A
Sbjct: 438 AITMVSVFSAISSL----GSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETAL 493
Query: 179 RVFDK---MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXX 235
+F + + +S W +I G +G L ++ ++ ++P+ TF
Sbjct: 494 NIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC 553
Query: 236 XXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIW 294
G +FESMK ++GI P +HY ++++LG AG+L EA+E ++KMP++ V IW
Sbjct: 554 HAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIW 613
Query: 295 QALRNFARIHGDIDLEDRAEELLIGFDPS 323
L + +R HG++++ + A L DPS
Sbjct: 614 GMLLSASRTHGNVEIAELAATELAAIDPS 642
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G + + ++ C G + + + K G V V+ L+ MY C
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
+KDAR++FD+MPERNL +W +M++GY+ G + +F Q+ + + G
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWG 274
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 3/206 (1%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVH-EFLKKS 152
S +A L C+ G+ +A+E+ D + +LK C ++ GK +H +++++
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 153 SFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVF 212
F G V V + LI +YGK G + A RV+ KM RN+ +W M+S NGRG++ + F
Sbjct: 393 CF-GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFF 451
Query: 213 QQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGN 271
M + G++PD +F G +F M K YGI P EHY +I++LG
Sbjct: 452 NDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGR 511
Query: 272 AGQLNEAEEFVEKMPLELGVDIWQAL 297
AG EAE +E+ +W L
Sbjct: 512 AGLFEEAENLLERAECRNDASLWGVL 537
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%)
Query: 116 GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMK 175
G G V D S + +L C + L+ GK +H L + V V + L+ MYGKCG ++
Sbjct: 258 GKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVR 317
Query: 176 DARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
+AR+VF+ M ++N SW ++ GY NG + + +F++M++
Sbjct: 318 EARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE 359
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 88 TPFAASSS---NADLMSLCEEGKLNQALELMG--HGA--VADSSVYLALLKLCEDSGSLE 140
TP +SS+ + ++ LC+ G+L +A+ ++ H + A +Y +LL+ C S
Sbjct: 19 TPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFI 78
Query: 141 SGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG-GMKDARRVFDKMPERNLSSWCLMISGY 199
G + H + KS + V N L+ +Y K G GM++ RRVFD ++ SW M+SGY
Sbjct: 79 HGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGY 138
Query: 200 TVNGRGDDGLLVFQQMKQAGVEPD 223
L VF +M G++ +
Sbjct: 139 VTGKEHVKALEVFVEMVSFGLDAN 162
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 108 LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGM 167
L +E++ G A+ + +K C + G + G+ H + F +++ L +
Sbjct: 148 LEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYL 207
Query: 168 YGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQA-GVEPDGET 226
YG DARRVFD+MPE ++ W ++S ++ N ++ L +F M + G+ PDG T
Sbjct: 208 YGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGST 267
Query: 227 F 227
F
Sbjct: 268 F 268
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 7/212 (3%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEF-LKKSSFNGEVEVN----NRLIGM 167
E+ G D L+LL C G LE+GKR+H + L+ +S + + V N LI M
Sbjct: 265 EMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDM 324
Query: 168 YGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
Y KCG + A VF + +R+LS+W +I G ++ + + +F++M++ V P+ TF
Sbjct: 325 YAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTF 383
Query: 228 XXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMP 286
G +F M++ Y I P +HY ++++LG AGQL EA FVE M
Sbjct: 384 IGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Query: 287 LELGVDIWQALRNFARIHGDIDLEDRAEELLI 318
+E +W+ L +I+G+++L A E L+
Sbjct: 444 IEPNAIVWRTLLGACKIYGNVELGKYANEKLL 475
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 96 NADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFN 155
NA ++ G L A EL A A + ++ G ++ R+ + + +
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFD---EMPYK 207
Query: 156 GEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
+V N + G KC M AR +FD+ E+++ +W MISGY G + L +F++M
Sbjct: 208 DQVAWNVMITGCL-KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEM 266
Query: 216 KQAGVEPDGETF 227
+ AG PD T
Sbjct: 267 RDAGEHPDVVTI 278
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 13/246 (5%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
++M G + D ++ C G LE GK VH + ++ F +V + + L+ MY KCG
Sbjct: 1022 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 1081
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
++ A VF +P++NL W +I G +G + L +F +M+ V+P+ TF
Sbjct: 1082 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 1141
Query: 233 XXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
G + SM +Y I EHY ++++ AG + EA E + M E
Sbjct: 1142 ACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNA 1201
Query: 292 DIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKLPTPPRKKQSAINMLEEKNR-- 349
IW AL + RIH ++ + + A L+ +P + L ++M E+NR
Sbjct: 1202 VIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFL---------LVSMYAEQNRWR 1252
Query: 350 -VAEYR 354
VAE R
Sbjct: 1253 DVAEIR 1258
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
+N LI Y G ++ A +F++MP +++ SW MI GY+ N R + + VF +M + G
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 220 VEPDGETF 227
+ PD T
Sbjct: 1028 IIPDEVTM 1035
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGY 199
G+ + + K F V++ LI Y G +++AR+VFD+MPER+ +W M+S Y
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY 945
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 1/177 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFN-GEVEVNNRLIGMYGKCGGMKDARRV 180
D ++++L LC L G +H + K+ F+ + V N LI MYGKCG ++ +V
Sbjct: 544 DKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKV 603
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXX 240
F++ E+NL +W +IS ++G G + L F++ G +PD +F
Sbjct: 604 FEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMV 663
Query: 241 XXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
G F+ MK+YG+ P +HY +++L G L EAE + +MP +W+
Sbjct: 664 KEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTF 720
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 117 HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKD 176
HG + Y+++L + L G+++H L K+ + + N LI Y KCG ++D
Sbjct: 310 HGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLED 369
Query: 177 ARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+R FD + ++N+ W ++SGY N G L +F QM Q G P TF
Sbjct: 370 SRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTF 419
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 86 QDTPFAASSSNADLMSLC-EEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLE 140
+D PF + + +MSL G L + + EL+ GA S +L +LK L+
Sbjct: 173 EDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLD 232
Query: 141 SGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYT 200
K++H K + E+ V N LI YGKCG A R+F ++ SW +I
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 201 VNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ L +F M + G P+ T+
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTY 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKK--SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
++LL +C + S K +H S V V N +I +Y K G + A +VFD+M
Sbjct: 16 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
PERN S+ +I GY+ G D VF +M+ G P+ T
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQST 117
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 7/239 (2%)
Query: 94 SSNADLMSLCEEGKLNQALEL----MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N+ + SL + G+ +ALEL + G D + + +L + G L++GK +H
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTA 260
Query: 150 KKSS-FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDG 208
+ S F + V N L+ Y K G ++ A +F KM RN+ SW +ISG VNG+G+ G
Sbjct: 261 ESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFG 320
Query: 209 LLVFQQMKQAG-VEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVI 266
+ +F M + G V P+ TF G F M E + + EHY ++
Sbjct: 321 IDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMV 380
Query: 267 NILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKA 325
+++ +G++ EA +F++ MP+ +W +L + R HGD+ L + A L+ +P +
Sbjct: 381 DLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNS 439
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G AD Y LLK C L GK VH L ++ F+ ++ ++ +Y G M DA
Sbjct: 97 GIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDA 156
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
++VFD+M ERN+ W LMI G+ +G + GL +F+QM + +
Sbjct: 157 QKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI 199
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 5/229 (2%)
Query: 85 NQDTPFAASSSNADLMSLCEEGKLNQALEL---MGHGAVADSSV-YLALLKLCEDSGSLE 140
NQ + + N+ L + G +A+ L M H + + V +LA+++ C GSLE
Sbjct: 463 NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Query: 141 SGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYT 200
GK VH L S ++ + LI MY KCG + A VF M R++ SW MI+ Y
Sbjct: 523 KGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYG 581
Query: 201 VNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCRE 260
++GR + F QM ++G +P+ F G +F MK +G++P E
Sbjct: 582 MHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSE 641
Query: 261 HYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDL 309
H+ I++L +G L EA +++MP +W +L N RIH +D+
Sbjct: 642 HFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDI 690
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Query: 97 ADLMSLC-EEGKLNQALEL----MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
+ L+S C E G++ +AL + + G D+ +++++ C + G L + VH + +
Sbjct: 171 STLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR 230
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
F+ + + N L+ MY KCG + + R+F+K+ ++N SW MIS Y + L
Sbjct: 231 KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 212 FQQMKQAGVEPDGETF 227
F +M ++G+EP+ T
Sbjct: 291 FSEMIKSGIEPNLVTL 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 108 LNQALELMGHGAVADSS-----VYLALLKLCEDSGS-LESGKRVHEFLKKSSFNGEVEVN 161
L+ A++L H V++++ V+ ++L+ C S L G +VH + K + + +
Sbjct: 81 LDAAIDLY-HRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIE 139
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
L+ MYG+ G + DA +VFD MP R+L +W ++S NG L +F+ M GVE
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199
Query: 222 PDGET 226
PD T
Sbjct: 200 PDAVT 204
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 133 CEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSW 192
CE++G + GK++H + ++ + E V N LI MY K G + A VF+++ R++ +W
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTW 473
Query: 193 CLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXG-FMHFESMK 251
M+ G++ NG + + +F M + +E + TF G ++H + +
Sbjct: 474 NSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI- 532
Query: 252 EYGIAPCREHYLE--VINILGNAGQLNEAEEFVEKM 285
I+ ++ + + +I++ G LN AE M
Sbjct: 533 ---ISGLKDLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE-VNNR 163
E L E++ G + ++L C G + GK VH F + + E ++
Sbjct: 285 EKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLA 344
Query: 164 LIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
L+ +Y +CG + D V + +RN+ +W +IS Y G L +F+QM ++PD
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPD 404
Query: 224 GETF 227
T
Sbjct: 405 AFTL 408
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
+LL + + +E G++VH V + LI MY KCG +K+A +F +
Sbjct: 416 SLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRD 475
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF 247
++ S MI+GY +G+ + + +F++ + G PD TF GF +F
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYF 535
Query: 248 ESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGD 306
M+E Y + P +EHY ++++L AG+L++AE+ + +M + +W L + GD
Sbjct: 536 NMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGD 595
Query: 307 IDLEDRAEELLIGFDPSKASADKLPTPPRKKQSAINMLEEKN 348
I+ RA E ++ DP+ A+A L T S N+ E N
Sbjct: 596 IERGRRAAERILELDPTCATA--LVTLANIYSSTGNLEEAAN 635
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%)
Query: 108 LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGM 167
L A+ ++ H D+SV +LK C S ++ G+ +H + K+S V V + L+ M
Sbjct: 93 LFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDM 152
Query: 168 YGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
Y + G + + RVF +MP RN +W +I+G GR +GL F +M ++ D TF
Sbjct: 153 YKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTF 212
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 77 KLDQSVHQNQDTPFA-ASSSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLK 131
K+D+S + PF A + A + L G+ + L E+ ++D+ + LK
Sbjct: 158 KIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALK 217
Query: 132 LCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSS 191
C ++ GK +H + F + V N L MY +CG M+D +F+ M ER++ S
Sbjct: 218 ACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS 277
Query: 192 WCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
W +I Y G+ + F +M+ + V P+ +TF
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTF 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+ ++ C L G+++H + N + V+N ++ MY CG + A +F M
Sbjct: 313 FASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR 372
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEP 222
R++ SW +I GY G G++G F M+Q+G +P
Sbjct: 373 CRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 1/201 (0%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
+++ C SLE G++V + + V++ LI +Y KCG ++ RRVFD M +
Sbjct: 455 SVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKS 514
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF 247
+ W MISGY NG+G + + +F++M AG+ P TF G F
Sbjct: 515 DEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLF 574
Query: 248 ESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGD 306
ESMK ++G P +EH+ ++++L AG + EA VE+MP ++ +W ++ +G
Sbjct: 575 ESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGY 634
Query: 307 IDLEDRAEELLIGFDPSKASA 327
+ +A E +I +P + A
Sbjct: 635 KAMGKKAAEKIIELEPENSVA 655
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 148 FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
LKK + V V N L+ MY + G M AR +FD+MP+RN SW MI GY +G
Sbjct: 52 LLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGT 111
Query: 208 GLLVFQQMKQAGVEPDGETF 227
L F M E DG ++
Sbjct: 112 SLRFFDMMP----ERDGYSW 127
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 31/133 (23%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG-------- 173
DS A++ C G LE+GK++H K ++ V + L+ MY KCG
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 174 -----------------------MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLL 210
+ DA+RVF+++ ++L SW M +G++ NG + L
Sbjct: 377 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLE 436
Query: 211 VFQQMKQAGVEPD 223
F QM + + D
Sbjct: 437 YFHQMHKLDLPTD 449
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D L++L D+G+L G+ H F+++ + +V+V ++ MY KCG ++ A+R+F
Sbjct: 273 DDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIF 332
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
D+MPE+ ++SW MI GY +NG L +F M +PD T
Sbjct: 333 DEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVE 391
Query: 242 XGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFA 301
G F M+E G+ EHY ++++LG AG L EAE+ + MP E I + +
Sbjct: 392 EGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSAC 451
Query: 302 RIHGDIDLEDRAEELL 317
+ DI +RAE +L
Sbjct: 452 GQYKDI---ERAERIL 464
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 39/291 (13%)
Query: 106 GKLNQALEL---MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNN 162
G+L+ A +L M H V D +Y A++ SG + S +R+ + + + V
Sbjct: 158 GELDLASKLFDQMPH--VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKT----VITWT 211
Query: 163 RLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMK-QAGVE 221
+I Y + AR++FD MPERNL SW MI GY N + +G+ +FQ+M+ ++
Sbjct: 212 TMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLD 271
Query: 222 PDGETFXXXXXXXXXXXXXXXG-----FMHFESMKEYGIAPCREHYLEVINILGNAGQLN 276
PD T G F+ + + + + C ++++ G++
Sbjct: 272 PDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDK-KVKVCT----AILDMYSKCGEIE 326
Query: 277 EAEEFVEKMPLELGVDIWQALRNFARIHGD----IDL------EDRAEELLIGFDPSKAS 326
+A+ ++MP E V W A+ + ++G+ +DL E++ +E+ + + +
Sbjct: 327 KAKRIFDEMP-EKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACN 385
Query: 327 ADKLPTPPRKKQSAINMLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLREA 377
L RK + + ++ Y C + L G +G L+EA
Sbjct: 386 HGGLVEEGRKWFHVMREMGLNAKIEHYGCMV--------DLLGRAGSLKEA 428
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D+ + L K C S + G ++H + + F ++ V+ ++ MY K G M AR F
Sbjct: 77 DNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAF 136
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
D+MP R+ SW +ISGY G D +F QM
Sbjct: 137 DEMPHRSEVSWTALISGYIRCGELDLASKLFDQM 170
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 119/234 (50%), Gaps = 14/234 (5%)
Query: 105 EGKLNQALELMGHGAVA-DSSVYLALLKLCEDSGSLESGKRVH----EFLKKSSFNGEVE 159
E +N ++++ G V + S + + + S +GK +H +FL K FN V
Sbjct: 207 EEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKR-FN--VF 263
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPE--RNLSSWCLMISGYTVNGRGDDGLLVFQQM-K 216
V N LI Y KCG M+D+ F+K+ E RN+ SW MI GY NGRG++ + +F++M K
Sbjct: 264 VWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVK 323
Query: 217 QAGVEPDGETFXXXXXXXXXXXXXXXGFMHF-ESMKEYGIAPCRE--HYLEVINILGNAG 273
+ P+ T G+M+F +++ +Y E HY ++++L +G
Sbjct: 324 DTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSG 383
Query: 274 QLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASA 327
+ EAEE ++ MPL+ G+ W+AL +IH + L A ++ DP S+
Sbjct: 384 RFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSS 437
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 83 HQNQDTPFA--------ASSSNADLMSLCEEGKLNQALEL---MGHGAVADSSVYLA-LL 130
+QN+D + + N+ + + G +++AL L M +V + V +A L
Sbjct: 391 YQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLF 450
Query: 131 KLCEDSGSLESGKRVHEFLKKSSF--NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
C GSL G +H + K F + V V L+ Y KCG + AR +FD + E+N
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFE 248
+W MI GY G L +F++M + +P+ TF G +F
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS 570
Query: 249 SM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDI 307
SM K+Y P +HY ++++L AG+L +A + +EKMP++ V + A + +H
Sbjct: 571 SMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRF 630
Query: 308 DLEDRAEELLIGFDPSKAS 326
DL + + ++ P AS
Sbjct: 631 DLGEIVIKKMLDLHPDDAS 649
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVH-EFLKKSSFNGEVEVNNRLIGMYGKCG 172
LM HG D V+ LK C + L++GK++H + +K SF+ V L+ MY KCG
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCG 190
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+K A +VF+ + RN+ W MI+GY N ++GL++F +M++ V + T+
Sbjct: 191 EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTY 245
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 102 LCEEGKL--NQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE 159
LCEEG + N+ E + + + Y L+ C +L GK H L KS
Sbjct: 222 LCEEGLVLFNRMRE---NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
+ L+ MY KCG + +ARRVF++ +L W MI GYT NG ++ L +FQ+MK
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 220 VEPDGET 226
++P+ T
Sbjct: 339 IKPNCVT 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 96 NADLMSLCEEGKLNQALEL---MGHGAVADSSVYLA-LLKLCEDSGSLESGKRVHEFLKK 151
A ++ G +N+AL L M + + V +A +L C +LE G+ VH K
Sbjct: 312 TAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIK 371
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
+ V N L+ MY KC +DA+ VF+ E+++ +W +ISG++ NG + L +
Sbjct: 372 VGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFL 430
Query: 212 FQQMKQAGVEPDGET 226
F +M V P+G T
Sbjct: 431 FHRMNSESVTPNGVT 445
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 121 ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
A SS LL C + SL ++ H L + G++ + +L+ +YG G KDAR V
Sbjct: 42 AASSPCFLLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLV 98
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
FD++PE + W +M+ Y +N + + ++ + + G D F
Sbjct: 99 FDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVF 145
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 8/230 (3%)
Query: 104 EEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE 159
+ GK ++A +L G D+ +L C G+LE GK++ + S +
Sbjct: 311 QNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY 370
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
V L+ MYGKCG +++A RVF+ MP +N ++W MI+ Y G + LL+F +M
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---S 427
Query: 220 VEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEA 278
V P TF G +F M +G+ P EHY +I++L AG L+EA
Sbjct: 428 VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
Query: 279 EEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASAD 328
EF+E+ P + + A+ D+ + ++A +L+ +K + +
Sbjct: 488 WEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGN 537
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 26/249 (10%)
Query: 94 SSNADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N+ + E G A++L G D +++L C G L +G+ + E
Sbjct: 200 SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA 259
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+ ++LI MYGKCG + ARRVF++M +++ +W MI+ Y+ NG+ +
Sbjct: 260 ITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAF 319
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEV---- 265
+F +M++ GV PD T G + ++ + +H + V
Sbjct: 320 KLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG----KQIETHASELSLQHNIYVATGL 375
Query: 266 INILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKA 325
+++ G G++ EA E MP++ W A+ A H + A+E L+ F
Sbjct: 376 VDMYGKCGRVEEALRVFEAMPVK-NEATWNAMIT-AYAH-----QGHAKEALLLF----- 423
Query: 326 SADKLPTPP 334
D++ PP
Sbjct: 424 --DRMSVPP 430
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G D Y + C + G+ VH L K +V +N+ LI MY KCG + A
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
R++FD++ ER+ SW MISGY+ G D + +F++M++ G EPD T
Sbjct: 187 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTL 236
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSF----NGEVEV 160
+G L ++ G D +L C SL G+ +H ++ S + +
Sbjct: 345 DGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI 404
Query: 161 NNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
+N L+ MY KCG ++DAR VFD M ++ +SW +MI+GY V G+ L +F M +AGV
Sbjct: 405 HNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGV 464
Query: 221 EPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAE 279
+PD TF G M+ Y I P +HY VI++LG A +L EA
Sbjct: 465 KPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAY 524
Query: 280 EFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
E P+ +W+++ + R+HG+ DL A + L +P
Sbjct: 525 ELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEP 567
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ +G + D + +LLK D+ L K+VH K F+ + V + L+ Y K
Sbjct: 151 EMRANGILPDKYTFPSLLK-GSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFM 209
Query: 173 GMKDARRVFDKMPERNLSS-WCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
++DA++VFD++P+R+ S W +++GY+ R +D LLVF +M++ GV
Sbjct: 210 SVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGV 258
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSF-NGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
+A L+ C SG+++H F+ + F + L+ MY KCG M+ A VF
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-S 122
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
ER++ + +ISG+ VNG D + +++M+ G+ PD TF
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTF 164
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%)
Query: 136 SGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLM 195
SG +++G+ +H K+ ++ V+N LI MYGK +++A +F+ M ER+L +W +
Sbjct: 275 SGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSV 334
Query: 196 ISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ + G D L +F++M +G+ PD T
Sbjct: 335 LCVHDYCGDHDGTLALFERMLCSGIRPDIVTL 366
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
LAL+ C G+ K +H + ++ ++ + L+ YG+CG + + VFD M +
Sbjct: 186 LALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMED 245
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMH 246
R++ +W +IS Y ++G + L FQ+M+ A V PD F ++
Sbjct: 246 RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVY 305
Query: 247 FESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
F+ M+ +YG+ ++HY ++++L G+ EA + ++ MP + W AL R +G
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 306 DIDLEDRAEELLIGFDP 322
+I+L + A L+ +P
Sbjct: 366 EIELAEIAARELLMVEP 382
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 94 SSNADLMSLCEEGKLNQALELM--GHGAVA---DSSVYLALLKLCEDSGSLESGKRVHEF 148
S L S +G QAL L H + A D+ V+ LK C + G VH
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 149 LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDG 208
KS+F V L+ MYGKC + AR++FD++P+RN W MIS YT G+ +
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEA 133
Query: 209 LLVFQQMKQAGVEPDGETF 227
+ +++ M V P+ +F
Sbjct: 134 VELYEAMD---VMPNESSF 149
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 1/206 (0%)
Query: 121 ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
DS ++LL+ C +G+L GK +H + +S V+ L+ MY KCG ++ A+R
Sbjct: 446 VDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRC 505
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXX 240
FD + +++ SW ++I+GY +G+GD L ++ + +G+EP+ F
Sbjct: 506 FDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMV 565
Query: 241 XXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRN 299
G F SM +++G+ P EH V+++L A ++ +A +F ++ +D+ + +
Sbjct: 566 QQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILD 625
Query: 300 FARIHGDIDLEDRAEELLIGFDPSKA 325
R +G ++ED E +I P A
Sbjct: 626 ACRANGKTEVEDIICEDMIELKPGDA 651
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 6/214 (2%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E++ G+ S +++ C GS + G VH ++ + + + N LI MY KCG
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEP-DGETFXXXX 231
+ + +F++M ER+L SW +ISGY N LL+F++MK V+ D T
Sbjct: 396 HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLL 455
Query: 232 XXXXXXXXXXXG-FMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELG 290
G +H ++ + I PC ++++ G L A+ + + +
Sbjct: 456 QACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-D 513
Query: 291 VDIWQALRNFARIH--GDIDLEDRAEELLIGFDP 322
V W L H GDI LE +E L G +P
Sbjct: 514 VVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEP 547
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 106 GKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVN 161
G +++ L+L+ G G D + A L + LE G+ +H + K+ F+ ++ +
Sbjct: 224 GNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK 283
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
LI MY KCG + + RV + +P +++ W +MISG GR + L+VF +M Q+G +
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 222 PDGE 225
E
Sbjct: 344 LSSE 347
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 136 SGSLESGKR--VHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWC 193
SG LE + +H+F F+ ++ V N ++ +Y KC + DA+ +FD+M +R++ SW
Sbjct: 155 SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWN 214
Query: 194 LMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
MISGY G + L + +M+ G+ PD +TF
Sbjct: 215 TMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 96 NADLMSLCEEGKLNQALE----LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N+ + L G Q L ++ + + D+ + +LLK C L G +H+ +
Sbjct: 15 NSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLV 74
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
+ F+ + +++ L+ +Y K G + AR+VF++M ER++ W MI Y+ G + +
Sbjct: 75 NGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSL 134
Query: 212 FQQMKQAGVEP 222
+M+ G++P
Sbjct: 135 VNEMRFQGIKP 145
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 8/251 (3%)
Query: 83 HQNQDTPFAASSSNADLMSLCEEGK-LNQALELMGH----GAVADSSVYLALLKLCEDSG 137
H + TP + S +++ E+ K +A++L G D +LL
Sbjct: 364 HYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLV 423
Query: 138 SLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP-ERNLSSWCLMI 196
+L G ++H+ + K+ +V V+N LI MY +CG + ++RR+FD+M +R + +W MI
Sbjct: 424 NLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Query: 197 SGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGI 255
GY +G + L +F MK G+ P TF F SM Y I
Sbjct: 483 GGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKI 542
Query: 256 APCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEE 315
P EHY ++N+ GQ EA + MP E +W AL + RI+ ++ L A E
Sbjct: 543 EPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAE 602
Query: 316 LLIGFDPSKAS 326
+ +P ++
Sbjct: 603 AMSRLEPESST 613
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 157 EVEVNNRLIGMYGKCGGMK---DARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQ 213
+V N +I Y CGG++ +AR++FD+MP R+ SW MISGY N R + LL+F+
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 214 QMKQ 217
+M +
Sbjct: 161 KMPE 164
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 140 ESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGY 199
E+ K E + SF+ N +I Y K + +A +F+KMPERN SW MI+G+
Sbjct: 123 EARKLFDEMPSRDSFSW-----NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGF 177
Query: 200 TVNGRGDDGLLVFQQM 215
NG D +++F++M
Sbjct: 178 CQNGEVDSAVVLFRKM 193
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 1/145 (0%)
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
N ++ Y G ++ AR F+K PE++ SW +I+ Y N + + +F +M G +
Sbjct: 347 NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 222 PDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEF 281
PD T G M + + P + +I + G++ E+
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLG-MQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRI 465
Query: 282 VEKMPLELGVDIWQALRNFARIHGD 306
++M L+ V W A+ HG+
Sbjct: 466 FDEMKLKREVITWNAMIGGYAFHGN 490
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 8/244 (3%)
Query: 84 QNQDTPFAASSSNADLMSLCEEGKLNQALE-----LMGHGAVADSSVYLALLKLCEDSGS 138
Q Q+TP S N+ + + G+ + A E ++ G + D+ +LL C
Sbjct: 407 QLQETPLI--SWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISG 198
L GK +H + +++F E V LI MY KCG A VF + ++W MISG
Sbjct: 465 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 524
Query: 199 YTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAP 257
Y+++G L + +M++ G++PD TF G + F +M KE+GI+P
Sbjct: 525 YSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISP 584
Query: 258 CREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELL 317
+HY ++ +LG A EA + KM ++ +W AL + IH ++++ + +
Sbjct: 585 TLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKM 644
Query: 318 IGFD 321
D
Sbjct: 645 FMLD 648
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 103 CEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNN 162
C+ KL + ++ G ++ + LL C G + G+ VH KS + +V N
Sbjct: 133 CDAWKL--FIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 163 RLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
LI Y KC + A +F +M +++ SW MI Y+ +G ++ + VF+ M + VE
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 143 KRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVN 202
++V L KS + V V L+ +Y K G + A+ +FD+MPER+ W +I GY+ N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 203 GRGDDGLLVFQQMKQAGVEPDGETF 227
G D +F M Q G P T
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTL 154
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D+ + +L C+ S ++ G +H + KS + V N LI MY K ++ +F
Sbjct: 346 DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLF 405
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMK-QAGVEPDGET 226
+++ E L SW +ISG +GR VF QM G+ PD T
Sbjct: 406 EQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAIT 451
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 7/249 (2%)
Query: 90 FAASSSNADLMS-LCEEGKLNQA----LELMGHGAVADSSVYLALLKLCEDSGSLESGKR 144
F + S L+S + G N+A +E+ G D + +L C GSL++G+
Sbjct: 280 FKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRL 339
Query: 145 VHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGR 204
VH ++ K V L+ MY KCG + +R +F+ + ++L W MIS Y ++G
Sbjct: 340 VHCYILKRHVLDRVTAT-ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGN 398
Query: 205 GDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYL 263
G + + +F +M ++ +EPD TF G F M +Y I P +HY+
Sbjct: 399 GQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYV 458
Query: 264 EVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPS 323
+I++L AG++ EA + + L+ + IW AL + H ++ + D A ++ +P
Sbjct: 459 CLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPD 518
Query: 324 KASADKLPT 332
L +
Sbjct: 519 SIGIQTLVS 527
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G D V L LL+ D G + G+ VH +L ++ V V L+ MY K G
Sbjct: 207 EMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG 266
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
++ A RVF +M + SW +ISG+ NG + +M+ G +PD T
Sbjct: 267 FIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTL 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
DSS + +K C LE G+ V + +V V + ++ +Y KCG M +A +F
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
KM +R++ W M++G+ G+ + +++M+ G D
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRD 216
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 144 RVHEFLKKSS--FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
++H F+ + NG ++ LI G+ G + AR+VFD++P+R +S + MI Y+
Sbjct: 35 QIHAFVISTGNLLNGS-SISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSR 93
Query: 202 NGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYG----IAP 257
D+ L ++ QM ++PD TF G + ++G +
Sbjct: 94 GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFV 153
Query: 258 CREHYLEVINILGNAGQLNEAEEFVEKMP 286
C V+N+ G+++EAE KM
Sbjct: 154 CS----SVLNLYMKCGKMDEAEVLFGKMA 178
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEF-LKKSSFNGEVEVNNRLIGMYGKC 171
E++ G +S ++L LC +L+ GK H + L++ F + N L+ +Y K
Sbjct: 371 EMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKS 430
Query: 172 GGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXX 231
G + A++V D M +R+ ++ +I GY G G L +F++M ++G++PD T
Sbjct: 431 GKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVL 490
Query: 232 XXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELG 290
G F M+ EYGI PC +H+ ++++ G AG L +A++ + MP +
Sbjct: 491 SACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPS 550
Query: 291 VDIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
W L N IHG+ + A E L+ P
Sbjct: 551 GATWATLLNACHIHGNTQIGKWAAEKLLEMKP 582
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
++ G D+ Y ++LK C ++ + G+ VH ++ SS+ + V N LI MY +
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
M ARR+FD+M ER+ SW +I+ Y G + +F +M +GVE T+
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITW 248
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
LK C G++ GK +H SS++G V N LI MY KC ++ A VF + E +L
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+W +ISGY + ++ + ++M AG +P+ T
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITL 384
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 3/204 (1%)
Query: 122 DSSVYLALLKLCE--DSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR 179
+ + ++++L C D G + GK++H ++ + L+ MYGK G ++ A
Sbjct: 220 NEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALT 279
Query: 180 VFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXX 239
+FD++ ++ + +W +IS NGR L +F+ MK + V P+G T
Sbjct: 280 IFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKL 339
Query: 240 XXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALR 298
G F S+ EY I P EHY V++++G AG L +A F++ +P E + AL
Sbjct: 340 VDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALL 399
Query: 299 NFARIHGDIDLEDRAEELLIGFDP 322
+IH + +L + + LIG P
Sbjct: 400 GACKIHENTELGNTVGKQLIGLQP 423
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 3/191 (1%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
+SS ++ LL C S + G+ V + L++ + + L+ MY K G ++ A +F
Sbjct: 327 NSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIF 386
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ--AGVEPDGETFXXXXXXXXXXXX 239
++M ++++ SW MISGY +G + + +F +M++ V P+ TF
Sbjct: 387 NRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGL 446
Query: 240 XXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALR 298
G F+ M E Y P EHY V+++LG AGQL EA E + +P+ W+AL
Sbjct: 447 VMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALL 506
Query: 299 NFARIHGDIDL 309
R++G+ DL
Sbjct: 507 AACRVYGNADL 517
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 119 AVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDAR 178
V + S L+ L D G L + H K + ++ + LIGMYGK GG+ AR
Sbjct: 223 VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSAR 282
Query: 179 RVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXX 238
R+FD +++ +W MI Y G ++ + + +QMK ++P+ TF
Sbjct: 283 RIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 239 XXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALR 298
G + ++E IA ++++ G L +A E +M + V W A+
Sbjct: 343 AAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMI 401
Query: 299 NFARIHG 305
+ HG
Sbjct: 402 SGYGAHG 408
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
+L G D ++ LK C + G+ +H +S F ++ N LI Y CG
Sbjct: 115 QLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCG 174
Query: 173 GMKDARRVFDKMPER-NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ DAR+VFD+MP+ + ++ +++GY + L +F+ M+++ V + T
Sbjct: 175 KISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTL 230
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E++ G D+ ++ L C SG + GK +H++ K+ + + L+ Y KCG
Sbjct: 239 EMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCG 298
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
+ A +F+ ++ L +W MI+G ++G G+ + F++M +G++PDG TF
Sbjct: 299 FIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLV 358
Query: 233 XXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELG- 290
F+ M+ Y + +HY + ++LG AG + EA E +E+MP + G
Sbjct: 359 GCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGN 418
Query: 291 ---VDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKL 330
+ W L RIHG+I++ ++A + P K+
Sbjct: 419 REKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKV 461
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G D + L +L C +L G H + + + N L+ MY KCG
Sbjct: 399 EMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
+ A+RVFD M +R++ SW M+ G+ ++G G + L +F M++ GV PD T
Sbjct: 459 KLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILS 518
Query: 233 XXXXXXXXXXGFMHFESMK--EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLE 288
G F SM ++ + P +HY + ++L AG L+EA +FV KMP E
Sbjct: 519 ACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFE 576
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRL 164
E L+ +++ G Y +LK C +++ GK +H + S F ++ V L
Sbjct: 85 EKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTAL 144
Query: 165 IGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQA-GVEPD 223
+ Y KCG ++ A +VFD+MP+R++ +W MISG++++ D + +F M++ G+ P+
Sbjct: 145 VDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPN 204
Query: 224 GET 226
T
Sbjct: 205 LST 207
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
+L C G L G+ VH + K+ F ++ V N +I Y K G + DA R F ++ ++
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ S+ +I+G VN R ++ +F +M+ +G+ PD T
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTL 412
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSF---NGEVEVNNRLIGMYGKCGGMKDARRVF 181
++L+LL+ C S +L G+ +H+ L K S + V VN L +Y C ++ AR VF
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN--LTRLYASCNEVELARHVF 58
Query: 182 DKMPERNLS--SWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
D++P ++ +W LMI Y N + L ++ +M +GV P T+
Sbjct: 59 DEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTY 106
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 136 SGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLM 195
+G+L GK VH + + F+ ++ V ++ +Y K + ARRVFD ++N +W M
Sbjct: 218 AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAM 277
Query: 196 ISGYTVNGRGDDGLLVFQQM 215
I GY N + VF QM
Sbjct: 278 IGGYVENEMIKEAGEVFFQM 297
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 26/301 (8%)
Query: 101 SLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEV 160
S C + E+ G ++ + LL +C SL ++ H ++ + G++ +
Sbjct: 546 SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRL 604
Query: 161 NNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
L+ +Y KCG +K A VF R+L + M++GY V+GRG + L+++ M ++ +
Sbjct: 605 KGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNI 664
Query: 221 EPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAE 279
+PD G ++S++ +G+ P E Y ++++ G+L++A
Sbjct: 665 KPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAY 724
Query: 280 EFVEKMPLELGVDIWQALRNFARIHGDIDL-------------EDRAEELLI----GFDP 322
FV +MP+E +IW L + +DL +D +LI D
Sbjct: 725 SFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADA 784
Query: 323 SKASADKLPTPPRKKQ----SAINMLE---EKNRVAEYRCSIPYKEEVNEKLKGLSGQLR 375
+L +KK+ + + LE ++N CS P ++ + + + L Q++
Sbjct: 785 KWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Query: 376 E 376
E
Sbjct: 845 E 845
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 123 SSVYLAL-LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGM-KDARRV 180
SSV A+ L LC G +GK +H ++ K+ + V N L+ MY K G + DA
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
FD + ++++ SW +I+G++ N D F M + EP+ T
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYAT 226
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSF---NGEVEVNNRLIGMYGKCGGMKDAR 178
DS L+LLK C + + K VH + K+ E ++ N L+ Y KCG ++ A
Sbjct: 431 DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAH 490
Query: 179 RVFDKMPE-RNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
++F + E R L S+ ++SGY +G DD ++F +M
Sbjct: 491 KIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 2/204 (0%)
Query: 121 ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
D + ALL+ C D +L+ G+++H KS F V + LI MY KCG ++ AR+
Sbjct: 406 VDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKC 465
Query: 181 FDKMPERNLS-SWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXX 239
F ++ ++ + +W MI GY +G G L +F QM V+ D TF
Sbjct: 466 FQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGL 525
Query: 240 XXXGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALR 298
G M+ Y I P EHY +++LG AG +N+A+E +E MPL + +
Sbjct: 526 IQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFL 585
Query: 299 NFARIHGDIDLEDRAEELLIGFDP 322
R G+I++ + L+ +P
Sbjct: 586 GVCRACGEIEMATQVANHLLEIEP 609
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 146 HEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRG 205
H + K ++ V+NR++ Y K G + A +FD+MP+R+ SW MISGYT G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 206 DDGLLVFQQMKQAGVEPDGETF 227
+D +F MK++G + DG +F
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSF 104
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 94 SSNADLMSLCEEGKLNQALELMG-----HGAVADSSVYLALLKLCEDSGSLESGKRVHEF 148
S NA + + + A L+G D+ + LL L +D K+VH
Sbjct: 169 SWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAK 228
Query: 149 LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM-PERNLSSWCLMISGYTVNGRGDD 207
+ K E+ + N +I Y CG + DA+RVFD + ++L SW MI+G++ + +
Sbjct: 229 VLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKES 288
Query: 208 GLLVFQQMKQAGVEPDGETF 227
+F QM++ VE D T+
Sbjct: 289 AFELFIQMQRHWVETDIYTY 308
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 104 EEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNR 163
+E +++ H D Y LL C GK +H + K N
Sbjct: 286 KESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNA 345
Query: 164 LIGMYGK--CGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
LI MY + G M+DA +F+ + ++L SW +I+G+ G +D + F ++ + ++
Sbjct: 346 LISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIK 405
Query: 222 PDGETF 227
D F
Sbjct: 406 VDDYAF 411
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 94 SSNADLMSLCEEGKLNQALEL----MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S A + +G N+AL+L + G + + + L SL GK +H ++
Sbjct: 278 SWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM 337
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER-NLSSWCLMISGYTVNGRGDDG 208
+++ V + LI MY K G ++ + RVF ++ + W MIS +G G
Sbjct: 338 IRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKA 397
Query: 209 LLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVIN 267
L + M + V+P+ T G FESM ++GI P +EHY +I+
Sbjct: 398 LRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLID 457
Query: 268 ILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKAS 326
+LG AG E +E+MP E IW A+ RIHG+ +L +A + LI DP ++
Sbjct: 458 LLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSA 516
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNG-EVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
+LL+ C D+ SL+ GK +H LK + F ++N LIGMY KCG DA +VFD+M
Sbjct: 51 SLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHL 110
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
RNL SW M+SGY +G +VF M + V
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDV 144
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 35/169 (20%)
Query: 94 SSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N ++ ++G L++AL E G + + LL C S L+ ++ H +
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM------------------------- 184
+ F V ++ +I Y KCG M+ A+R FD+M
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 185 ------PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
PE+N SW +I+GY G G+ L +F++M GV+P+ TF
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
+++ HG +S+ + LL C ++ GK +H + + V + L+ MYGKCG
Sbjct: 278 QMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCG 337
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
+ +A +F K P++ ++ MI Y +G D + +F QM+ G + D TF
Sbjct: 338 FISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILT 397
Query: 233 XXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
G F M+ +Y I P EHY ++++LG AG+L EA E ++ M +E +
Sbjct: 398 ACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDL 457
Query: 292 DIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKLPT 332
+W AL R HG+++L A + L +P + L T
Sbjct: 458 FVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLT 498
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G D+ + +LLK + E GK +H + K S+ + + + LI MY K G
Sbjct: 107 EMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFG 166
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ +AR+VF + E++L + MISGY N + D+ L + + MK G++PD T+
Sbjct: 167 EVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITW 221
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
G+ +H L S + +L+ Y +CG + DAR+VFD+MP+R++S +MI
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 202 NGRGDDGLLVFQQMKQAGVEPDG 224
NG + L F++M + G++ D
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDA 117
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 9/227 (3%)
Query: 104 EEGKLNQALEL------MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
+ G+ N+ALE+ MG + A+ ++++ C G+L GK VH ++
Sbjct: 217 KRGEYNKALEIFDQMMRMG-SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLT 275
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDK--MPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
V + LI MY KCG + DA VF + + E + W +I G +G + L +F +M
Sbjct: 276 VILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM 335
Query: 216 KQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQL 275
+++ ++PD TF + F+S+KE G P EHY ++++L AG +
Sbjct: 336 RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLV 395
Query: 276 NEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
+A +F+ +MP++ + AL N HG+++L + + LI P
Sbjct: 396 KDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQP 442
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRL 164
E ++ ++++ G + D Y L+K + + G +H + KS ++ + N L
Sbjct: 90 EKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTL 149
Query: 165 IGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
I MYG AR++FD+MP +NL +W ++ Y +G LVF +M + V
Sbjct: 150 IHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDV 205
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
N ++ Y K G + AR VFD+M ER++ +W MI GY G + L +F QM + G
Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 237
Query: 222 PDGET 226
E
Sbjct: 238 KANEV 242
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 125/301 (41%), Gaps = 31/301 (10%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRL 164
E L +E+M G +D Y A+L C L GK +H L F G V N L
Sbjct: 319 EQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNAL 378
Query: 165 IGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDG 224
+ +Y KCG +K+A R F + ++L SW M+ + V+G D L ++ M +G++PD
Sbjct: 379 VNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDN 438
Query: 225 ETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVE 283
TF G M FESM K+Y I +H +I++ G G L EA++
Sbjct: 439 VTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLAT 498
Query: 284 KMPLELGVD-----IWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKLPTP----- 333
L D W+ L H +L ++L +PS+ + L +
Sbjct: 499 TYS-SLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCST 557
Query: 334 ----------------PRKKQSAINMLEEKNRVAEYRC---SIPYKEEVNEKLKGLSGQL 374
KK + +E N+V+ + S P EE++E L L ++
Sbjct: 558 GRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEM 617
Query: 375 R 375
R
Sbjct: 618 R 618
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 33/139 (23%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + A+L C G+++ G+++ + +S F + VNN LI MYGKC A +VF
Sbjct: 69 DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVF 128
Query: 182 D---------------------------------KMPERNLSSWCLMISGYTVNGRGDDG 208
+MP+R +W +MISG+ G+ +
Sbjct: 129 RDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESC 188
Query: 209 LLVFQQMKQAGVEPDGETF 227
L +F++M ++ +PD TF
Sbjct: 189 LSLFKEMLESEFKPDCYTF 207
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 32/134 (23%)
Query: 122 DSSVYLALLKLCE-DSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR- 179
D + +L+ C DS ++ G+ VH + K+ ++ VE N ++ Y K G DA R
Sbjct: 203 DCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRE 262
Query: 180 ------------------------------VFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
VF PE+N+ +W MI+GY NG G+ L
Sbjct: 263 LESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQAL 322
Query: 210 LVFQQMKQAGVEPD 223
F +M ++GV+ D
Sbjct: 323 RFFVEMMKSGVDSD 336
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
LL+ GSL G+ VH++ K+ F + + LI MY KCG ++DAR+VFD M ++
Sbjct: 257 LLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS 316
Query: 189 LSSWCLMISGYTVNGRGDDGLLVF-QQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF 247
L++W MI+ V+G G++ L +F + ++A VEPD TF G +F
Sbjct: 317 LATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYF 376
Query: 248 ESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKM 285
M + YGI+P REH +I +L A ++ +A VE M
Sbjct: 377 TRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%)
Query: 105 EGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRL 164
E L L ++ H + D + ++K C S S+ G +VH K+ F +V N L
Sbjct: 101 EALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTL 160
Query: 165 IGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
+ +Y KCG R+VFDKMP R++ SW M+ G N + D +VF QM V
Sbjct: 161 MDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 23/237 (9%)
Query: 103 CEEGKLNQALELMG-----HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
CE K +A++L G D + ++L C G+++ G+ VHE++ + +
Sbjct: 283 CERSK--EAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWD 340
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
+ ++ MY KCG ++ A +F+ + +N+ +W ++ G ++G G + L F++M +
Sbjct: 341 THIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVK 400
Query: 218 AGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK--EYGIAPCREHYLEVINILGNAGQL 275
G +P+ TF G +F MK EY + P EHY +I++L AG L
Sbjct: 401 LGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLL 460
Query: 276 NEAEEFVEKMPLELGVDIWQALRNFARIHG--------------DIDLEDRAEELLI 318
+EA E V+ MP++ V I A+ + + G DI+ ED +L+
Sbjct: 461 DEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLL 517
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
+ +G D + + K C + GK++H + K F ++ V N L+ YG CG
Sbjct: 97 FVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGE 156
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
++A +VF +MP R++ SW +I+G+T G + L F +M VEP+ T+
Sbjct: 157 SRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATY 207
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 4/206 (1%)
Query: 124 SVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK 183
+ Y+ +L G L GK +H + K + +E N LI MY KC + DA RVF +
Sbjct: 205 ATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGE 264
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMK-QAGVEPDGETFXXXXXXXXXXXXXXX 242
+ +++ SW MISG R + + +F M+ +G++PDG
Sbjct: 265 LEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDH 324
Query: 243 GFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFAR 302
G E + GI ++++ G + A E + + V W AL
Sbjct: 325 GRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK-NVFTWNALLGGLA 383
Query: 303 IHG-DIDLEDRAEELL-IGFDPSKAS 326
IHG ++ EE++ +GF P+ +
Sbjct: 384 IHGHGLESLRYFEEMVKLGFKPNLVT 409
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 4/207 (1%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEF-LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
D V ++LK+C S+ G+++H F LK S +V + N LI MY K G ++DA
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLA 374
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXX 240
F++M E+++ SW +I+GY +G + + ++ +M+ ++P+ TF
Sbjct: 375 FEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQT 434
Query: 241 XXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMP--LELGVDIWQAL 297
G+ +++M ++GI EH +I++L +G L EA + + L W A
Sbjct: 435 ELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAF 494
Query: 298 RNFARIHGDIDLEDRAEELLIGFDPSK 324
+ R HG++ L A L+ +P K
Sbjct: 495 LDACRRHGNVQLSKVAATQLLSMEPRK 521
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%)
Query: 121 ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
A+ Y ++LK C+D G L+ G ++H ++K + G + V + L+ +Y +CG M++AR
Sbjct: 111 ANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
FD M ER+L SW MI GYT N D +FQ M G +PD TF
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTF 217
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%)
Query: 124 SVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK 183
S+YL LKLC + +H + F +++ + LI +Y K G +K AR++FD+
Sbjct: 13 SLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDR 72
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ +R++ SW MIS ++ G D LL+F++M + V+ + T+
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTY 116
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 8/222 (3%)
Query: 133 CEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSW 192
C D+ L GK++H ++ F + ++ N L+ MYGKCG + AR +F +P +++ SW
Sbjct: 291 CSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSW 350
Query: 193 CLMISGYTVNGRGDDGLLVFQQMKQ--AGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM 250
MI Y VNG G L +F++M + +GV P+ TF G F M
Sbjct: 351 TSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMM 410
Query: 251 KE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMP----LELGVDIWQALRNFARIHG 305
KE Y + P EHY+ I+IL AG+ E VE+M + IW A+ + ++
Sbjct: 411 KEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNM 470
Query: 306 DIDL-EDRAEELLIGFDPSKASADKLPTPPRKKQSAINMLEE 346
D+ E A L+ P AS L + +++EE
Sbjct: 471 DLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEE 512
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 111 ALELMGHGAVAD--SSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMY 168
AL L H A D S + +L C E+G++VH + K LI MY
Sbjct: 70 ALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMY 129
Query: 169 GKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
K G + D+ RVF+ + E++L SW ++SG+ NG+G + L VF M + VE
Sbjct: 130 SKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVADSS------VYLALLKLCEDSGSLESGKRVHE 147
S NA + + G N+ LE+ + + DS+ +++L C GSL G+ VH
Sbjct: 270 SWNAMVTAYAHVGCYNEVLEVF-NKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 148 FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
++ K E + L+ MY KCG + A VF +R++S+W +IS +V+G G D
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 208 GLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVI 266
L +F +M G +P+G TF FE M Y + P EHY ++
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMV 448
Query: 267 NILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLI 318
++LG G++ EAEE V ++P + + ++L + G ++ +R L+
Sbjct: 449 DLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLL 500
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + +LK C E G+++H KS +V V N L+ +YG+ G + AR+V
Sbjct: 139 DKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVL 198
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
D+MP R+ SW ++S Y G D+ +F +M++ VE
Sbjct: 199 DRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE 238
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 128/298 (42%), Gaps = 12/298 (4%)
Query: 106 GKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLI 165
G A +++ V D+ + +LL + G ++ + + + +++ + VE N +I
Sbjct: 189 GYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERN----VESWNFMI 244
Query: 166 GMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE-PDG 224
Y G +K+A+ VFD MP R++ SW M++ Y G ++ L VF +M E PDG
Sbjct: 245 SGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDG 304
Query: 225 ETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEK 284
T G + ++GI ++++ G++++A E V +
Sbjct: 305 FTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALE-VFR 363
Query: 285 MPLELGVDIWQALRNFARIH--GDIDLEDRAEELLIGFDPSKASADKLPTPPRKKQSAIN 342
+ V W ++ + +H G LE +E + GF P+ + + + +
Sbjct: 364 ATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH----VG 419
Query: 343 MLEEKNRVAEYRCSIPYKEEVNEKLKGLSGQLREAGYVPDTRYVLHDIDEEEKEKALQ 400
ML++ ++ E S+ E E + L G + + ++++I +E L+
Sbjct: 420 MLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLE 477
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 2/205 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D ++L+ ++G L G+ VH + + G+ +++ LI MY KCG ++ A VF
Sbjct: 367 DRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF 426
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
E++++ W MI+G +G G L +F +M++ GV P+ T
Sbjct: 427 KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVE 486
Query: 242 XGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVE-KMPLELGVDIWQALRN 299
G F MK+ +G P EHY ++++L AG++ EA++ V+ KMP+ +W ++ +
Sbjct: 487 EGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILS 546
Query: 300 FARIHGDIDLEDRAEELLIGFDPSK 324
R DI+ + A L+ +P K
Sbjct: 547 ACRGGEDIETAELALTELLKLEPEK 571
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 92 ASSSNADLMSLCEEGKLNQALEL----MGHGAVADSSVYLALLKLCEDSGSLESGKRVHE 147
SS N ++ ++G +AL+L + G D L+LL C + GK VH
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 148 FLKKSS--FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRG 205
++++ ++ + ++N L+ MY KC A+R FD M ++++ SW M+ G+ G
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDM 316
Query: 206 DDGLLVFQQM 215
+ VF QM
Sbjct: 317 EAAQAVFDQM 326
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
++ ++ +++ + +L G VH L + F + V N L+ MY KCG ++ + + F
Sbjct: 603 NAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCF 662
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
++ + + SW M+S Y +G + +F M++ ++PD +F
Sbjct: 663 IEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVE 722
Query: 242 XGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNF 300
G FE M E + I EHY ++++LG AG EA E + +M ++ V +W AL N
Sbjct: 723 EGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNS 782
Query: 301 ARIHGDIDLEDRAEELLIGFDP 322
+R+H ++ L + A L+ +P
Sbjct: 783 SRMHCNLWLSNAALCQLVKLEP 804
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 92 ASSSNADLMSLCEEGKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHE 147
A + NA + G N+A ++ HG DS + +L+ C G V+
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 148 FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP-ERNLSSWCLMISGYTVNGRGD 206
+ K F+ E V + LI M+ KC + A +FDK E++ SW +M++GY ++G+ +
Sbjct: 527 QIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 207 DGLLVFQQMKQAGVEPDGETF 227
+ + F+QMK +P+ TF
Sbjct: 587 EAVATFRQMKVEKFQPNAVTF 607
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 137 GSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMI 196
G L G +H++ + G+V V L+ MY KCG ++ A ++F + +R++ SW MI
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 197 SGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIA 256
+ Y G+ D+ + +F+ M + ++P+ T G +S+ Y I
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG----KSIHCYAIK 429
Query: 257 PCREHYLE----VINILGNAGQLNEAEEFVEKMPLELGV 291
E LE VI++ G+ + A + E++P++ V
Sbjct: 430 ADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAV 468
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL 189
LK C S + G R+H+ + + +V + L+ MY K + AR+VFDKM +++
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDV 166
Query: 190 SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+W M+SG NG LL+F M+ V+ D
Sbjct: 167 VTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDID 200
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 8/199 (4%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
++L+ C + GK +H + K+ E+E +I MY KCG A + F+++P +
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF 247
+ ++ + GYT G + V++ MK GV PD T G +
Sbjct: 466 DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVY 525
Query: 248 ESMKEYGI-APCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGD 306
+ ++G + C + +IN+ L A +K E W + N +HG
Sbjct: 526 GQIIKHGFDSECHVAH-ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG- 583
Query: 307 IDLEDRAEELLIGFDPSKA 325
+AEE + F K
Sbjct: 584 -----QAEEAVATFRQMKV 597
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSS----WCL 194
L +H +L K+ F ++ L+ +Y KCG ++ A ++F+ + E++ S W
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 195 MISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYG 254
+ISGY ++G G + L VF +M ++GV P+ TF G F M E+
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHY 555
Query: 255 IAPCRE-HYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRA 313
R HY ++++LG AG+L+EA + +P E +W AL H ++ L + A
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA 615
Query: 314 EELLIGFDP 322
L +P
Sbjct: 616 ANKLFELEP 624
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 82 VHQNQDTPFAASSSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSG 137
V +N+D S N + G +N AL ++ D + +++L +C
Sbjct: 177 VMKNRDVI----SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232
Query: 138 SLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMIS 197
LE G+ VH+ +++ ++EV N L+ MY KCG M +AR VFD+M R++ +W MI+
Sbjct: 233 DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 198 GYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
GYT +G ++ L + + M+ GV P+ T
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTI 322
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%)
Query: 116 GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMK 175
G V D Y + K + S++ G VH + +S F + V N L+ MY G ++
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 176 DARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
AR VFD M R++ SW MISGY NG +D L++F M V+ D T
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATI 221
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 104 EEGKLNQALEL---MGHGAVADSSVYLA-LLKLCEDSGSLESGKRVHEFLKKSSFNGEVE 159
E+G + ALEL M V ++V +A L+ +C D+ + GK +H + + ++
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII 355
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
+ LI MY KC + RVF + + W +I+G N D L +F++M++
Sbjct: 356 IETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED 415
Query: 220 VEPDGETF 227
VEP+ T
Sbjct: 416 VEPNIATL 423
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Query: 138 SLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMIS 197
S++ G+R H L K N V++ L+ MY K G + ++ +VF++M ++N W +IS
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 198 GYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIA 256
Y+ +G + + +F +M + V PD TF G+ F M E Y +
Sbjct: 549 AYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE 608
Query: 257 PCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEEL 316
P EHY ++++LG AG+L EAEE + ++P G + Q++ R+HG++ + + EL
Sbjct: 609 PSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAEL 668
Query: 317 LIGFDP 322
+ P
Sbjct: 669 AMEMKP 674
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 108 LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGM 167
LN + + G V D+ Y L C S G ++ + K+ ++ V N I M
Sbjct: 159 LNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITM 218
Query: 168 YGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGR-GDDGLLVFQQMKQAGVEPDGET 226
Y + G + ARRVFD+M +++ SW ++SG + G G + +++F+ M + GVE D +
Sbjct: 219 YSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVS 278
Query: 227 F 227
F
Sbjct: 279 F 279
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 94 SSNADLMSLCEEGKLN-QAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEF 148
S N+ L L +EG +A+ ++M G D + +++ C L+ +++H
Sbjct: 242 SWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGL 301
Query: 149 LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDG 208
K + +EV N L+ Y KCG ++ + VF +M ERN+ SW MIS DD
Sbjct: 302 CIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDA 356
Query: 209 LLVFQQMKQAGVEPDGETF 227
+ +F M+ GV P+ TF
Sbjct: 357 VSIFLNMRFDGVYPNEVTF 375
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 4/193 (2%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G + ++ L+ + + ++ G ++H K+ F E V N I +Y K ++DA
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDA 426
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
++ F+ + R + SW MISG+ NG + L +F A P+ TF
Sbjct: 427 KKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFA 485
Query: 238 --XXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQ 295
G + + G+ C ++++ G ++E+E+ +M + +W
Sbjct: 486 EDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWT 544
Query: 296 ALRNFARIHGDID 308
++ + HGD +
Sbjct: 545 SIISAYSSHGDFE 557
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 108 LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGM 167
+ L+L G D LK C G L+ G ++H F S F V V+N ++GM
Sbjct: 63 FKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGM 120
Query: 168 YGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
Y K G +A +F+ + + ++ SW ++SG+ N L +MK AGV D T+
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTY 177
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%)
Query: 108 LNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGM 167
++ + G G D+ ++L C SG L+ G+ VH + V+N LI M
Sbjct: 259 IDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDM 318
Query: 168 YGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
Y KCG +++A VF+ + R+++ MIS ++G+G + L +F M+ ++PD TF
Sbjct: 319 YAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
Query: 228 XXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPL 287
G F MK + P +H+ +I++LG +G+L EA V++M +
Sbjct: 379 IAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHV 438
Query: 288 ELGVDIWQALRNFARIHGDIDLEDRAEELL 317
+ + AL ++H D ++ ++ +++
Sbjct: 439 KPNDTVLGALLGACKVHMDTEMAEQVMKII 468
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 43/159 (27%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
GK +H K +V V + LI MYGKCG + AR+VFD+MPERN+++W MI GY
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 202 NGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCRE- 260
NG +F++ I+ CR
Sbjct: 125 NGDAVLASGLFEE----------------------------------------ISVCRNT 144
Query: 261 -HYLEVINILGNAGQLNEAEEFVEKMPLEL-GVDIWQAL 297
++E+I G ++ +A E E+MP EL V W +
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVM 183
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHE--FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR 179
D + L C D G+++ G+ ++ +K ++ + N L+ MY K G + AR+
Sbjct: 166 DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARK 225
Query: 180 VFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG------VEPDGETFXXXXXX 233
+FD+ ++++++ MI GY +NG+ + L +F++MK + P+ TF
Sbjct: 226 LFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMA 285
Query: 234 XXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVD 292
G HF+SM +Y + P H+ ++++ +G L +A EF+ +MP++
Sbjct: 286 CSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTV 345
Query: 293 IWQALRNFARIHGDIDLEDRAEELLIGFD 321
IW+ L +HG+++L + + + D
Sbjct: 346 IWRTLLGACSLHGNVELGEEVQRRIFELD 374
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 95 SNADLMSLCEEGKLNQALELMGH------GAVADSSVYLALLKLCEDSGSLESGKRVHEF 148
SN L E G+ +AL H V SV A+ S G+++H
Sbjct: 31 SNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHAL 90
Query: 149 LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER-NLSSWCLMISGYTVNGRGDD 207
++K FN +++ L+G Y G + AR+VFD+ PE+ N+ W MIS YT N +
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 208 GLLVFQQMKQAGVEPDG 224
+ +F++M+ +E DG
Sbjct: 151 AIELFKRMEAEKIELDG 167
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 5/202 (2%)
Query: 127 LALLKLCEDSGSLESGKRVHEFLKKSSF-NGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
LA+L + G L+ VH ++ K F ++ V N LI Y KCG ++ A + F ++P
Sbjct: 260 LAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIP 319
Query: 186 --ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXG 243
+NL SW MIS + ++G G + + +F+ M++ G++P+ T
Sbjct: 320 NGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEE 379
Query: 244 FMHF--ESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFA 301
F+ F + EY I P +HY ++++L G+L EAE+ ++P+E +W+ L
Sbjct: 380 FLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGAC 439
Query: 302 RIHGDIDLEDRAEELLIGFDPS 323
++ D +L +R L+ + S
Sbjct: 440 SVYDDAELAERVTRKLMELERS 461
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 122 DSSVYLALLKLCEDS--GSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR 179
DS YL LLK + SL G +H K F V V L+GMY G M DA +
Sbjct: 120 DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHK 179
Query: 180 VFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
VFD+MPERN +W +MI+G T G + L ++M V
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTV 220
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 10/217 (4%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E++ G + S + LL C S L+ G+ VH L ++ N V ++ LI MYGKC
Sbjct: 240 EMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCK 299
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
+ ARR+FD + RN +W +MI + ++GR + GL +F+ M + PD TF
Sbjct: 300 EVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLC 359
Query: 233 XXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
G ++ M E+ I P H + N+ +AG EAEE ++ +P E
Sbjct: 360 GCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDE--- 416
Query: 292 DI------WQALRNFARIHGDIDLEDRAEELLIGFDP 322
D+ W L + +R G+ L + + LI DP
Sbjct: 417 DVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%)
Query: 97 ADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNG 156
A L+S + L +++ G V DS +++L+ E + ++SGK H K +
Sbjct: 92 AYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQ 151
Query: 157 EVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNG 203
+ V N L+ MY CG + A+++F ++P+R++ SW +I+G NG
Sbjct: 152 VLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNG 198
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 1/204 (0%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
EL G D + +L C + SGK VH ++ + +++V + LI MY KCG
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXX 232
+K A +F +PE+N+ S+ +I G ++G F ++ + G+ PD TF
Sbjct: 358 LLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLC 417
Query: 233 XXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGV 291
G FE MK E+GI P EHY+ ++ ++G AG+L EA EFV + +
Sbjct: 418 TCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDS 477
Query: 292 DIWQALRNFARIHGDIDLEDRAEE 315
I AL + +H + L + E
Sbjct: 478 GILGALLSCCEVHENTHLAEVVAE 501
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 2/204 (0%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
++ LL GS G + H L + F V+ L+ MY CG ++ +VF
Sbjct: 681 TFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNS 740
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ-AGVEPDGETFXXXXXXXXXXXXXXXG 243
++S+W +IS + +G G+ + +F+++ + +EP+ +F G
Sbjct: 741 GVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEG 800
Query: 244 FMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFAR 302
+++ M+E +G+ P EH + ++++LG AG+L EA EF+ + +W AL +
Sbjct: 801 LSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACN 860
Query: 303 IHGDIDLEDRAEELLIGFDPSKAS 326
HGD L E+L +P AS
Sbjct: 861 YHGDTKLGKEVAEVLFEMEPDNAS 884
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE--VEVNNRLIGMYGKC 171
+ G G AD+ + ++ C L G+ +H + KS ++ E V V N +I MY KC
Sbjct: 280 MTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKC 339
Query: 172 GGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG-VEPDGET 226
G + A VF+++ R++ S +++G+ NG ++ + QM+ ++PD T
Sbjct: 340 GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIAT 395
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVADS-----SVYLALLKLCEDSGSLESGKRVHEF 148
SSNA L G +A ++ D + +++ +C D G+ VH +
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 149 LKKSSFNGE-VEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNG 203
+ +EV N +I MYGKCG A +F R+L SW MIS ++ NG
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 127 LALLKLCEDSGSLE---SGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK 183
+ LL SG+L G+ H KS + ++ N LI MYG+C ++ A +VF
Sbjct: 582 ITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGL 641
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ + NL SW +IS + N G + VFQ + +EP+ TF
Sbjct: 642 ISDPNLCSWNCVISALSQNKAGRE---VFQLFRNLKLEPNEITF 682
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 2/206 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D+ + + +L C + G LE K H ++ K F+ + L+ +Y +CG + +A +VF
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM-KQAGVEPDGETFXXXXXXXXXXXXX 240
+ + ++ W +I+GY ++G+G L F M K + V+P+ TF
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 241 XXGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRN 299
G F+ M +Y +AP EHY ++++LG G L+ A E ++MP I L
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLG 544
Query: 300 FARIHGDIDLEDRAEELLIGFDPSKA 325
RIH + ++ + + L + + A
Sbjct: 545 ACRIHQNGEMAETVAKKLFELESNHA 570
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
++M G + + L +L+ C + LE G++ HE + EV+V+ L+ MY KC
Sbjct: 254 DMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCF 313
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQM 215
++A VF ++P +++ SW +ISG+T+NG + F M
Sbjct: 314 SPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
+M D + L+ C + G+ VH F+ + F+ ++ + N L+ Y K
Sbjct: 154 VMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA 213
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
K+A +F + E+++ SW +I+ Y NG + LLVF M G EP+ T
Sbjct: 214 FKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 266
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKS-SFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
LK C + + G+ +H F+KK + ++ V + LI MY KCG M +A R+FD++ + +
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAG-VEPDGETF 227
+ +W M+SG+ NG + F++M A V PD T
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTL 166
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 106 GKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVN 161
G ++A+EL G ADS L +L +L G+ +H +L + F E +
Sbjct: 566 GNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA 625
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
++ MY CG ++ A+ VFD++ + L + MI+ Y ++G G + +F +M+ V
Sbjct: 626 VAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685
Query: 222 PDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEE 280
PD +F G + M+ EY + P EHY+ ++++LG A + EA E
Sbjct: 686 PDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFE 745
Query: 281 FVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDP 322
FV+ M E ++W AL R H + ++ + A + L+ +P
Sbjct: 746 FVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEP 787
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 74 PKLKLDQSVHQN---QDTPFAASSSNADLMS---LCEEGKLNQA---LELMGHGAVADSS 124
P+++L S+ + PF S+ + S C +G L +A L++ + + ++
Sbjct: 24 PRVRLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAF 83
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE-VNNRLIGMYGKCGGMKDARRVFDK 183
Y+ L+LC ++ G+++H + K+ + E++ + +L+ MYGKCG + DA +VFD+
Sbjct: 84 AYV--LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
MP+R +W MI Y NG L ++ M+ GV
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV 178
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVH-EFLK 150
N+ L S GK + LEL G +S ++ L C+ + GK +H LK
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 312
Query: 151 KSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLL 210
S+ + E+ V N LI MY +CG M A R+ +M ++ +W +I GY N + L
Sbjct: 313 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALE 372
Query: 211 VFQQMKQAGVEPD 223
F M AG + D
Sbjct: 373 FFSDMIAAGHKSD 385
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 124 SVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK 183
S + ALLK C + SG +H L K ++ + N L+ MY K + ARR+FD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 184 MPER-NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
E+ + W ++S Y+ +G+ + L +F++M G P+ T
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTI 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
+ N L+ +YGKC M A RVF+ + +++ SW MIS +NG + + +F++M + G
Sbjct: 523 IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG 582
Query: 220 VEPD 223
+ D
Sbjct: 583 LSAD 586
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISG 198
L +G +H ++ K ++ ++V N LI MY KC R F +M +++L SW +I+G
Sbjct: 402 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAG 461
Query: 199 YTVNGRGDDGLLVFQQMKQAGVEPD 223
Y N + L +F+ + + +E D
Sbjct: 462 YAQNDCHVEALELFRDVAKKRMEID 486
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
++ C D +L SG+++ + KS + V I MY K G M A +VF ++ +
Sbjct: 465 MMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPD 524
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFE 248
++++ MIS +G ++ L +F+ MK G++P+ + F G +F+
Sbjct: 525 VATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQ 584
Query: 249 SMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDI 307
MK +Y I P +H+ ++++LG G+L++AE + + W+AL + R++ D
Sbjct: 585 CMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDS 644
Query: 308 DLEDRAEELLIGFDP 322
+ R E L+ +P
Sbjct: 645 VIGKRVAERLMELEP 659
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
DS Y L + SGS+ GK H + KSS N + + N L+ MY KC + AR++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
D+MPERN+ S+ +ISGYT G + + +F + ++A ++ D T+
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVA----DSSVYLALLKLCEDSGSLESGKRVHEFL 149
S N+ + + G QA+EL A D Y L C + L+ G+ +H +
Sbjct: 115 SFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLV 174
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
+ + +V + N LI MY KCG + A +FD+ ER+ SW +ISGY G ++ L
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPL 234
Query: 210 LVFQQMKQAGV 220
+ +M + G+
Sbjct: 235 NLLAKMHRDGL 245
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 128 ALLKLC---EDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
++LK C + G +E G +H + K ++ V L+ MY K G +K+A ++F M
Sbjct: 254 SVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLM 313
Query: 185 PERNLSSWCLMISGY-----TVNGRGDDGLLVFQQMKQAGVEPDGETF 227
P +N+ ++ MISG+ + + +F M++ G+EP TF
Sbjct: 314 PSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTF 361
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 55/103 (53%)
Query: 124 SVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDK 183
S + +LK C + +LE G+++H + K++F + + + LI +Y G +D + F
Sbjct: 359 STFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAS 418
Query: 184 MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
+++++SW MI + N + + +F+Q+ + + P+ T
Sbjct: 419 TSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM-PE 186
+LL C D +L++GK +H + K++ ++ V LI MY KCG ARR+FD+ P+
Sbjct: 373 SLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPK 432
Query: 187 -RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFM 245
++ W +MISGY +G + + +F+ +++ VEP TF G
Sbjct: 433 PKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQ 492
Query: 246 HFESMK-EYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIH 304
F M+ EYG P EH +I++LG +G+L EA+E +++M +L R H
Sbjct: 493 IFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQH 551
Query: 305 GDIDLEDRAEELLIGFDPSKASADKLPTPPRKKQSAINMLEEKNRVAEYRCSIPYKEEVN 364
D L + A L +P P P S LE V R I K+ V
Sbjct: 552 LDPVLGEEAAMKLAELEPEN------PAPFVILSSIYAALERWEDVESIRQVIDQKQLV- 604
Query: 365 EKLKGLS 371
KL GLS
Sbjct: 605 -KLPGLS 610
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
++ + C +L+ G+++H + K F E V LI MY KC K A VF ++
Sbjct: 234 FVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELK 293
Query: 186 E-RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGF 244
+ RNL SW +ISG +NG+ + + +F+++ G++PD T+ F
Sbjct: 294 DTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAF 353
Query: 245 MHFESMKEYGIAP 257
FE M + P
Sbjct: 354 KFFERMLSVVMVP 366
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Query: 93 SSSNADLMSLCEEGKLNQALELMGHGAVADSSV-YLALLKLCEDSGSLESGKRVHEFLKK 151
+S NA + L E G A + G V+ S + + + + G +E G ++H K
Sbjct: 98 ASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMK 157
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLV 211
S F EV V L+ MY +CG A R+F+K+P +++ ++ ISG NG + V
Sbjct: 158 SGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSV 217
Query: 212 FQQMKQ-AGVEPDGETF 227
F M++ + EP+ TF
Sbjct: 218 FNLMRKFSSEEPNDVTF 234
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 129 LLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
LLK C G + G+ +H + K+ F +V L+ MY K + DA +V D+MPER
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERG 96
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
++S +SG NG D +F + +G
Sbjct: 97 IASVNAAVSGLLENGFCRDAFRMFGDARVSG 127
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 94 SSNADLMSLCEEGKLNQALELM-GHGAVADSSVYL--ALLKLCEDSGSLESGKRVHEFLK 150
S NA L + G+ QAL G A S Y LL C + +L GK +H FL
Sbjct: 464 SWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLI 523
Query: 151 KSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLL 210
+ + +V + ++ MY KC A VF + R+L W +I G NGR +
Sbjct: 524 RDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFE 583
Query: 211 VFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIAPCREHYLEVINIL 269
+F ++ GV+PD TF GF +F SM +Y I+P EHY +I +
Sbjct: 584 LFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELY 643
Query: 270 GNAGQLNEAEEFVEKMPLE 288
G L++ EEF+ MP +
Sbjct: 644 CKYGCLHQLEEFLLLMPFD 662
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
+Y L + C + ++V L S + + NR I YGKCG + DAR +F++M
Sbjct: 63 LYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEM 122
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
PER+ SW +I+ NG D+ +F++M + GV +F
Sbjct: 123 PERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSF 165
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 94 SSNADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
S NA + + + G ++ + G A + + +LK C L +++H +
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAV 188
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
K ++G V++ ++ +YGKC M DARRVFD++ + SW +++ Y G D+ +
Sbjct: 189 VKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAV 248
Query: 210 LVFQQMKQAGVEPDGET 226
++F +M + V P T
Sbjct: 249 VMFFKMLELNVRPLNHT 265
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D+ + +L +C ++ GK+ H F+ + ++ V V N L+ MYGKCG ++ A F
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 182 DKMPE-RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+M E R+ SW +++G GR + L F+ M Q +P T
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTL 499
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 123 SSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFD 182
SSV LA C S +LE GK +H K S + V+ + MY KC ++ ARRVFD
Sbjct: 267 SSVMLA----CSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFD 322
Query: 183 KMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGV 220
+ ++L SW +SGY ++G + +F M + +
Sbjct: 323 QTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI 360
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 3/198 (1%)
Query: 128 ALLKLCEDSGSLESGKRVHEF-LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
++L L G+L+ GK H + L++ S+ + + N L+ MY K G + A+RVFD M +
Sbjct: 428 SILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRK 487
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMH 246
R+ ++ +I GY G+G+ L F+ M ++G++PD T G
Sbjct: 488 RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWL 547
Query: 247 FESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
F M+ +GI EHY ++++ AG L++A + +P E + L IHG
Sbjct: 548 FTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHG 607
Query: 306 DIDL-EDRAEELLIGFDP 322
+ ++ E A++LL+ P
Sbjct: 608 NTNIGEWAADKLLLETKP 625
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
+M G AD Y +++K C G+ VH ++ SS + V N LI MY + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ ARR+FD+M ER+ SW +I+ YT + + + +M +GVE T+
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTW 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKS-SFNGEVE-VNNRLIGMYGKCGGMKDARRVFDKMPER 187
LK C G+L+ GK H + +S SF+ +++ V N LI MY +C ++ A VF ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+LS+W +ISG+ N R ++ + ++M +G P+ T
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 3/198 (1%)
Query: 128 ALLKLCEDSGSLESGKRVHEF-LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPE 186
++L L G+L+ GK H + L++ S+ + + N L+ MY K G + A+RVFD M +
Sbjct: 428 SILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRK 487
Query: 187 RNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMH 246
R+ ++ +I GY G+G+ L F+ M ++G++PD T G
Sbjct: 488 RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWL 547
Query: 247 FESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
F M+ +GI EHY ++++ AG L++A + +P E + L IHG
Sbjct: 548 FTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHG 607
Query: 306 DIDL-EDRAEELLIGFDP 322
+ ++ E A++LL+ P
Sbjct: 608 NTNIGEWAADKLLLETKP 625
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
+M G AD Y +++K C G+ VH ++ SS + V N LI MY + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ ARR+FD+M ER+ SW +I+ YT + + + +M +GVE T+
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTW 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKS-SFNGEVE-VNNRLIGMYGKCGGMKDARRVFDKMPER 187
LK C G+L+ GK H + +S SF+ +++ V N LI MY +C ++ A VF ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+LS+W +ISG+ N R ++ + ++M +G P+ T
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
Query: 138 SLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMIS 197
SL S VH KS + +V V+ LI Y K G + +R+VFD++ N+ +I+
Sbjct: 434 SLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIIN 493
Query: 198 GYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMK-EYGIA 256
GY NG G D + + ++M + + PD T G + F+S++ +YGI+
Sbjct: 494 GYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGIS 553
Query: 257 PCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEEL 316
P R+ Y ++++LG AG + +AE + + + W +L RIH + + RA E+
Sbjct: 554 PGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEV 613
Query: 317 LIGFDP 322
L+ +P
Sbjct: 614 LMNLEP 619
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N L C+ G+ + E+ G + Y +++ C + GK++H + K
Sbjct: 182 NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVK 241
Query: 152 SSFN-GEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLL 210
S +N + V N L+ Y CG + + R F+ +PE+++ SW ++S G D L
Sbjct: 242 SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLD 301
Query: 211 VFQQMKQAGVEPDGETF 227
+F +M+ G P F
Sbjct: 302 LFSKMQFWGKRPSIRPF 318
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFN-GEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
+++ L C + ++SGK++H ++ K F+ + V + LI MYGKC G++++ ++ +
Sbjct: 318 FMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSL 377
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
P NL +++ G D + +F M G D T
Sbjct: 378 PCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTL 420
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Query: 105 EGKLNQALELMGHGAVA-DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNR 163
E LN +++ G+V + Y+++L C D L G+++H+ + KS V +
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSA 371
Query: 164 LIGMYGKCGGMKDARRVFDK--MPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
L+ MY K G + AR++FD + +R+L SW MI+ Y +G G + + ++ QM++ G +
Sbjct: 372 LLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFK 431
Query: 222 PDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCR-EHYLEVINILGNAGQLNEAEE 280
P T+ G F+ + P R EHY ++++ G AG+L +
Sbjct: 432 PSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTN 491
Query: 281 FVEKMPLELGVDIWQALRNFARIHGDIDL 309
F+ L + A+ + +H ++ +
Sbjct: 492 FINCDDARLSRSFYGAILSACNVHNEVSI 520
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSS 153
S N + + G++++ALEL + + +++K G ++ + E + +
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR- 200
Query: 154 FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQ 213
+V ++ K G + +ARR+FD MPERN+ SW MI+GY N R D+ +FQ
Sbjct: 201 ---DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQ 257
Query: 214 QM 215
M
Sbjct: 258 VM 259
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 26/292 (8%)
Query: 102 LCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESG--KRVHEFLKKSSFNGEVE 159
LC+ GK+ +A +L D + ++ +G ++ G + E + V
Sbjct: 56 LCKVGKIAEARKLFDGLPERDVVTWTHVI-----TGYIKLGDMREARELFDRVDSRKNVV 110
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
++ Y + + A +F +MPERN+ SW MI GY +GR D L +F +M +
Sbjct: 111 TWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 220 VEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAE 279
+ ++ FE M + + +++ L G+++EA
Sbjct: 171 I----VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS----WTAMVDGLAKNGKVDEAR 222
Query: 280 EFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSKASADKLPT---PPRK 336
+ MP E + W A+ + ID D+ +++ D AS + + T R+
Sbjct: 223 RLFDCMP-ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF--ASWNTMITGFIRNRE 279
Query: 337 KQSAINMLE---EKNRVAEYRCSIPYKE--EVNEKLKGLSGQLREAGYVPDT 383
A + + EKN ++ Y E E E L S LR+ P+
Sbjct: 280 MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNV 331
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
DS +L +C D +L+ GK +H + K F V+ R+I MYGKCG ++ A F
Sbjct: 518 DSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSF 577
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
D + + +W +I Y N D + F+QM G P+ TF
Sbjct: 578 DAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVD 637
Query: 242 XGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEF 281
+ F M + Y + P EHY VI +L G++ EA+
Sbjct: 638 EAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVH-EFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRV 180
+S + +L + D +L+ GK VH LK ++ + V++ LI +Y KCG M RRV
Sbjct: 315 NSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRV 374
Query: 181 FDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
F +RN SW ++SGY NGR D L M+Q G PD T
Sbjct: 375 FYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 420
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 98 DLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSS 153
D+ + L AL ++ + G +++ + ALL+ C SL GK+VH ++ +
Sbjct: 82 DIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRING 141
Query: 154 FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNG--RGDDGLLV 211
+ +L+ MY CG +KDA++VFD+ N+ SW ++ G ++G R D L
Sbjct: 142 LESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLST 201
Query: 212 FQQMKQAGVE 221
F +M++ GV+
Sbjct: 202 FTEMRELGVD 211
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 92 ASSSNADLMSLCEEGKLNQALE----LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHE 147
A S A + G+ +QAL + G D +L +C + +++ GK +H
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHC 442
Query: 148 FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
+ K+ F V + L+ MY KCG + R+FD++ +RN+ +W MI Y N
Sbjct: 443 YALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 208 GLLVFQQMKQAGVEPDGET 226
G+ VF+ M + PD T
Sbjct: 503 GIEVFRLMLLSKHRPDSVT 521
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 136 SGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLM 195
+ +L G + H K+ V + L+ MY KCG + ARRVFD++ ER++ W M
Sbjct: 227 ASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAM 286
Query: 196 ISGYTVNGRGDDGLLVFQQM 215
I+G N R + L +F+ M
Sbjct: 287 IAGLAHNKRQWEALGLFRTM 306
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E++ G + Y + LK C +S SL G+ +H KK+ V V + LI MY KCG
Sbjct: 476 EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCG 535
Query: 173 GMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
+ +A RVFD MPE+NL SW MI GY NG + L + +M+ G E D F
Sbjct: 536 FVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIF 590
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%)
Query: 120 VADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARR 179
+A++ +++L+ C G+L GK +H + K+S V + + L+ +Y KCG +DA
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFN 441
Query: 180 VFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
V ++P R++ SW MISG + G + L ++M Q GVEP+ T+
Sbjct: 442 VLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTY 489
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%)
Query: 114 LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGG 173
++ H + + ++LK C + +L G++VH + K +V V L+ MY KCG
Sbjct: 275 MLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE 334
Query: 174 MKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
+ D R+VFD M RN +W +I+ + G G++ + +F+ MK+
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKR 378
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
+++ LL LC E G++VH + K G + V + L+ Y +CG + A R FD M
Sbjct: 186 MFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMM 244
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
E+++ SW +IS + G G + +F M P+
Sbjct: 245 EEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPN 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
Y L + + S + KR+H K + + N LI + G + AR+VFD MP
Sbjct: 85 YALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMP 144
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGE 225
E+N +W MI GY G D+ +F+ + G+ E
Sbjct: 145 EKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNE 184
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D + + +L G L +H ++ + F ++ LI MY KCG ++ A VF
Sbjct: 349 DDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVF 408
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
+ + +++ W MI G ++G G+ + Q+++ ++PD TF
Sbjct: 409 EGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVK 468
Query: 242 XGFMHFESM-KEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNF 300
G + FE M +++ I P +HY +++IL +G + A+ +E+MP+E IW+
Sbjct: 469 EGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTA 528
Query: 301 ARIHGDIDLEDRAEELLI---GFDPS 323
H + + + + LI G++PS
Sbjct: 529 CSHHKEFETGELVAKHLILQAGYNPS 554
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%)
Query: 118 GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDA 177
G D +LK C G ++ G ++H FLKK+ ++ + N LIG+Y KCG + +
Sbjct: 116 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLS 175
Query: 178 RRVFDKMPERNLSSWCLMISGYTVNG 203
R++FD+MP+R+ S+ MI GY G
Sbjct: 176 RQMFDRMPKRDSVSYNSMIDGYVKCG 201
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%)
Query: 137 GSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMI 196
G+ G V ++ + + ++ LI +Y K G A ++F + +++ S+ MI
Sbjct: 345 GNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMI 404
Query: 197 SGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIA 256
G +NG + +F M + + P+ TF G+ F SMK++ +
Sbjct: 405 MGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLE 464
Query: 257 PCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRA 313
P +HY ++++LG AG+L EA E ++ MP++ +W AL + +H +++ + A
Sbjct: 465 PSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIA 521
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 112 LELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKC 171
+++ G S ++L+ C ++ GK +H K+ G V V L+G+Y +
Sbjct: 93 IDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRL 152
Query: 172 GGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
G ++ A++ FD + E+N SW ++ GY +G D+ VF ++ +
Sbjct: 153 GYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE 198
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Query: 100 MSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVE 159
+ LCE G L +E++ + D+ V + K C G+ VH ++ KS V
Sbjct: 151 IGLCE-GALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVF 209
Query: 160 VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
V + L MYGKCG + DA +VFD++P+RN +W ++ GY NG+ ++ + +F M++ G
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 220 VEP 222
VEP
Sbjct: 270 VEP 272
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D L+ + +L+ GK V + + SF ++ + + ++ MY KCG + DA++VF
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
D E++L W +++ Y +G + L +F M+ GV P+ T+
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVD 493
Query: 242 XGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKM 285
F M+ GI P + ++N + G EA F+ KM
Sbjct: 494 EAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 2/170 (1%)
Query: 130 LKLCEDSGSLESGKRVHEFLKKS-SFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERN 188
L C SL G+ +H ++ ++ + V + L+ MY KCG + A +VF
Sbjct: 553 LSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSE 612
Query: 189 LSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF- 247
L MIS Y + G + + +++ ++ G++PD T F
Sbjct: 613 LPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT 672
Query: 248 ESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
+ + + + PC EHY ++++L +AG+ +A +E+MP + + Q+L
Sbjct: 673 DIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSL 722
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 7/221 (3%)
Query: 83 HQNQDTPFAASSSNADLMSLCEEGKLNQALELMGHGAVAD----SSVYLALLKLCEDSGS 138
H Q +++S + SLC+ G++ +AL L+ + +Y +L+ C
Sbjct: 26 HDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERD 85
Query: 139 LESGKRVH-EFLKKSSFNGEVE-VNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMI 196
L +GK++H LK F E + +L+ Y KC ++ A +F K+ RN+ SW +I
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII 145
Query: 197 SGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIA 256
G + L+ F +M + + PD G + + G+
Sbjct: 146 GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 257 PCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
C + ++ G G L++A + +++P V W AL
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVA-WNAL 245
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 92 ASSSNADLMSLCEEGKLNQALEL---MGHGAVADSSVYLAL-LKLCEDSGSLESGKRVHE 147
A + NA ++ + GK +A+ L M V + V ++ L + G +E GK+ H
Sbjct: 239 AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHA 298
Query: 148 FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDD 207
+ + + L+ Y K G ++ A VFD+M E+++ +W L+ISGY G +D
Sbjct: 299 IAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVED 358
Query: 208 GLLVFQQMKQAGVEPDGETF 227
+ + Q M+ ++ D T
Sbjct: 359 AIYMCQLMRLEKLKYDCVTL 378
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISG 198
L+ G VH + K F+ + V L+ MY K G + A VF K ++L W +I G
Sbjct: 351 LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMG 410
Query: 199 YTVNGRGDDGLLVFQQM-KQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESM-KEYGIA 256
N R + L +F Q+ ++PD T G F SM K +G+
Sbjct: 411 LARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVN 470
Query: 257 PCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEEL 316
P EHY +I +L G +NEA++ +K+P E IW+ + + GD L + +
Sbjct: 471 PGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKT 530
Query: 317 LIGFDP 322
++ +P
Sbjct: 531 MLESEP 536
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 128 ALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER 187
+++ C D L G+ H ++ F+ + V L+ MYGK G + A +F
Sbjct: 508 SVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNP 567
Query: 188 NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHF 247
+L W M+ Y+ +G + L F+Q+ + G PD T+ G +
Sbjct: 568 DLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLW 627
Query: 248 ESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPL-ELGVDIWQALRNFARIHGD 306
MKE GI +HY ++N++ AG ++EA E +E+ P ++W+ L + +
Sbjct: 628 NQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRN 687
Query: 307 IDLEDRAEELLIGFDPSKASADKL 330
+ + A E ++ DP + L
Sbjct: 688 LQIGLYAAEQILKLDPEDTATHIL 711
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 51 TSNSRSAHKAPHLQKANNNT--------SIEPKLKL-DQSVHQN---QDTPFAASSSNAD 98
T+ + +A ++P+ ANNN S+E K+ D+ H+N + ++A S N D
Sbjct: 122 TAGAGAATESPY---ANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPD 178
Query: 99 LMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEV 158
S + A E + +SS + +L+++C + G ++ + K ++ V
Sbjct: 179 FASYAFPLTTHMAFEYVK----PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNV 234
Query: 159 EVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQA 218
V ++GMY CG ++ ARR+FD + R+ +W MI G N + +DGL+ F+ M +
Sbjct: 235 VVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS 294
Query: 219 GVEPDGETF 227
GV+P T+
Sbjct: 295 GVDPTQFTY 303
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 126 YLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMP 185
Y +L C GS GK +H + S ++ ++N L+ MY CG M++A VF ++
Sbjct: 303 YSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH 362
Query: 186 ERNLSSWCLMISGYTVNGRGDDGLLVFQQ-MKQAGVEPDGETF 227
NL SW +ISG + NG G+ +L++++ ++ + PD TF
Sbjct: 363 NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTF 405
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 142 GKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTV 201
G +H K + V V + LI MY KCG +K A +F MP +NL W MISGY
Sbjct: 339 GSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYAR 398
Query: 202 NGRGDDGLLVFQQMKQA-GVEPDGETFXXXXXXXXXXXXXXXGFM-HFESM-KEYGIAPC 258
NG + + +F Q+KQ ++PD TF + +FE M EY I P
Sbjct: 399 NGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPS 458
Query: 259 REHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL 297
EH +I +G G++ +A++ +++ W+AL
Sbjct: 459 VEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRAL 497
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 71/122 (58%)
Query: 106 GKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLI 165
G L A+EL+ G D+S + LL++ + G + +++H ++ K F ++N L+
Sbjct: 38 GVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLM 97
Query: 166 GMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGE 225
Y ++DA +VFD+MP+ ++ SW ++SGY +GR +G+ +F ++ ++ V P+
Sbjct: 98 RFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEF 157
Query: 226 TF 227
+F
Sbjct: 158 SF 159
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 142 GKRVHEFLKKSSF-NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYT 200
G +H L K G V V N LI MYGKCG M DA VF M E++ SW +++ +
Sbjct: 175 GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 201 VNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCRE 260
NG+ + GL F QM PD T+ F M P
Sbjct: 235 RNGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQVLSDMPN----PNSS 286
Query: 261 HYLEVINILGNAGQLNEAEEFVEKM 285
+ ++ N+ + EA EF KM
Sbjct: 287 SWNTILTGYVNSEKSGEATEFFTKM 311
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
DS V +++L C +E GK +H ++ + ++ + MY KCG ++ A R+F
Sbjct: 392 DSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIF 451
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
D ER+ + MI+G +G F+ M + G +PD TF
Sbjct: 452 DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVL 511
Query: 242 XGFMHFESMKE-YGIAPCREHYLEVINILGNAGQLNEAEEFVEKM-PLELGVDIWQALRN 299
G +F+SM E Y I+P HY +I++ G A +L++A E +E + +E I A N
Sbjct: 512 EGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLN 571
Query: 300 FARIHGDIDLEDRAEELLIGFDPSKAS 326
+ + +L EE L+ + S S
Sbjct: 572 ACSWNKNTELVKEVEEKLLVIEGSNGS 598
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 96 NADLMSLCEEGKLNQA---LELMGHGA---VADSSVYLALLKLCEDSGSLESGKRVHEFL 149
NA + S G +++A L+LMG D + +LL C +E GK++H L
Sbjct: 212 NALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAIL 267
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
K S+ ++ V L+ MY K + DAR F+ M RN+ SW MI G+ NG G + +
Sbjct: 268 FKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAM 327
Query: 210 LVFQQMKQAGVEPDGETF 227
+F QM ++PD TF
Sbjct: 328 RLFGQMLLENLQPDELTF 345
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 6/236 (2%)
Query: 94 SSNADLMSLCEEGKLNQALELMGHGAVA----DSSVYLALLKLCEDSGSLESGKRVHEFL 149
S NA ++ + G+ +A+ L G + D + ++L C ++ K+V +
Sbjct: 309 SWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGL 209
K + V N LI Y + G + +A F + E +L SW +I +G ++ L
Sbjct: 369 TKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESL 428
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKE-YGIAPCREHYLEVINI 268
+F+ M Q ++PD TF G F+ M E Y I EHY +I++
Sbjct: 429 QMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDL 487
Query: 269 LGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDIDLEDRAEELLIGFDPSK 324
LG AG ++EA + + MP E A IH + + L+ +P+K
Sbjct: 488 LGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTK 543
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D ++ L++LC DS ++++G ++H + K + L+ YGKCG + +ARRVF
Sbjct: 141 DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVF 200
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDD--GLLVFQQMKQAGVEPDGETFXXXXXXXXXXXX 239
+ + +R+L W ++S Y +NG D+ GLL + D TF
Sbjct: 201 EAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQG 260
Query: 240 XXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQAL-- 297
+ F+ ++ I ++N+ + L++A E E M + V W A+
Sbjct: 261 KQIHAILFKVSYQFDIPVAT----ALLNMYAKSNHLSDARECFESMVVR-NVVSWNAMIV 315
Query: 298 --------RNFARIHGDIDLED 311
R R+ G + LE+
Sbjct: 316 GFAQNGEGREAMRLFGQMLLEN 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 6/183 (3%)
Query: 131 KLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS 190
KL L K+ H F+ K + + N+L+ Y K DA ++FD+MP RN+
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 191 SWCLMISGYT-----VNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFM 245
+W ++I G N R G ++ V D +F G
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 246 HFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHG 305
M + G+ +++ G G + EA E + L+ + +W AL + ++G
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYVLNG 222
Query: 306 DID 308
ID
Sbjct: 223 MID 225
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 8/198 (4%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N +M + G ++AL+L+G G A ++ ++++ DSG + + E L++
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS----SWCLMISGYTVNGRGDD 207
S N L+ Y K G +KDA + +M +R +S ++ L+I Y GR +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 208 GLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVIN 267
+V ++M+ V+P+ F F + MK G+ P R+ Y VI+
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 268 ILGNAGQLNEAEEFVEKM 285
G L+ A ++M
Sbjct: 453 TFGKFNCLDHAMTTFDRM 470
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 8/198 (4%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N+ + + +G L++A+EL G D Y LL E +G +ES + E ++
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS----SWCLMISGYTVNGRGDD 207
+ + N I MYG G + ++FD++ LS +W +++ + NG +
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 208 GLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVIN 267
VF++MK+AG P+ ETF + M + G+ P Y V+
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 268 ILGNAGQLNEAEEFVEKM 285
L G ++E+ + +M
Sbjct: 533 ALARGGMWEQSEKVLAEM 550
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 8/199 (4%)
Query: 107 KLNQALELMGHGAVA-DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLI 165
K+ +E M +A D+ Y L+ C+ + +V E +K + F+ + N L+
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 166 GMYGKCGGMKDARRVFDKMPERNLS----SWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
+YGK K+A +V ++M S ++ +IS Y +G D+ + + QM + G +
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 222 PDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEF 281
PD T+ FE M+ G P + I + GN G+ E +
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 282 VEKMPL-ELGVDI--WQAL 297
+++ + L DI W L
Sbjct: 442 FDEINVCGLSPDIVTWNTL 460
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 129/297 (43%), Gaps = 27/297 (9%)
Query: 53 NSRSAHKAPHLQKANNNTS-------IEPKLKLDQSVHQNQDTPFAASSSNADLMSLCEE 105
N R + + P L+ N+ S E + ++ ++ +P S N L +LC +
Sbjct: 777 NLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSP-TVESINILLHALCVD 835
Query: 106 GKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVN 161
G+L + EL G S L +L +G++ K+++ +K + + + +
Sbjct: 836 GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 162 NRLIGMYGKCGGMKDARRVFDKMPERN----LSSWCLMISGYTVNGRGDDGLLVFQQMKQ 217
+I + K ++DA + +M E N L+ W M+ YT + V+Q++K+
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955
Query: 218 AGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNE 277
G+EPD T+ G++ + M+ G+ P + Y +I+ G L +
Sbjct: 956 TGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQ 1015
Query: 278 AEEFVEKM---PLELGVDIWQALRNFARIHGDIDLEDRAEELL-----IGFDPSKAS 326
AE+ E++ L+L + + +R G + +AE+LL G +P+ A+
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMMKISRDSGS---DSKAEKLLQMMKNAGIEPTLAT 1069
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 122 DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVF 181
D +++L C LE G + ++++K+ LI MY + G + +A+RVF
Sbjct: 397 DEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVF 456
Query: 182 DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXX 241
D+M ER++ S+ + + + NG G + L + +MK G+EPD T+
Sbjct: 457 DEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLK 516
Query: 242 XGFMHFESMKEYGIAPCREHY 262
G F+S++ P +HY
Sbjct: 517 EGQRIFKSIRN----PLADHY 533
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 164 LIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPD 223
+I + K +++AR+ FD+MPE+++ SW M+SGY NG +D L +F M + GV P+
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 224 GETF 227
T+
Sbjct: 264 ETTW 267
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 4/162 (2%)
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
V ALL + ++S +R+ L + N +I Y + G M AR++FD M
Sbjct: 301 VKTALLDMHAKCRDIQSARRIFNELGTQR---NLVTWNAMISGYTRIGDMSSARQLFDTM 357
Query: 185 PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG-VEPDGETFXXXXXXXXXXXXXXXG 243
P+RN+ SW +I+GY NG+ + F+ M G +PD T G
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 244 FMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKM 285
+ +++ I Y +I + G L EA+ ++M
Sbjct: 418 DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 112 LELMGHGAVADSSVYLALLKLCE---DSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMY 168
+E+ HG + SV+ +LK C D G SG++VH K F + + RLI MY
Sbjct: 285 IEMGNHGIKKNVSVFSNVLKACSWVSDGG--RSGQQVHANAIKLGFESDCLIRCRLIEMY 342
Query: 169 GKCGGMKDARRVF-DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEP 222
GK G +KDA +VF E ++S W M++ Y NG + + + QMK G++
Sbjct: 343 GKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKA 397
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 149 LKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLSSWCLMISGYTVNGRGDDG 208
+ KSS + NRL+ M+ CG + R++FD+MP R+ SW ++ G G +D
Sbjct: 114 IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDA 173
Query: 209 LLVFQQM 215
+F M
Sbjct: 174 AFLFVSM 180
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 102 LCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
LC +GK + E++G + D + AL+ + G L K ++ + +
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMP----ERNLSSWCLMISGYTVNGRGDDGLLVFQ 213
N LI + K + +A ++FD M E ++ ++ ++I+ Y R DDG+ +F+
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 214 QMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAG 273
++ G+ P+ T+ F+ M G+ P Y +++ L + G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 274 QLNEAEEFVEKMP---LELGVDIWQALRNFARIHG 305
+LN+A E EKM + LG+ I+ + IHG
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNII-----IHG 499
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 94 SSNADLMSLCEEGKLNQALEL----MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
+ N ++ C+ GKLN A EL + G Y LL D+G L + E +
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMK--DARRVF----DKMPERNLSSWCLMISGYTVNG 203
+KS + + N +I +G C K DA +F DK + ++ ++ +MI G G
Sbjct: 482 QKSRMTLGIGIYNIII--HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Query: 204 RGDDGLLVFQQMKQAGVEPDGETF 227
+ ++F++MK+ G PD T+
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTY 563
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 8/200 (4%)
Query: 94 SSNADLMSLCEEGKLNQALE----LMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
+ N + C+ G+ +A+E + G AD Y+ +++ C S +++ +
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRG 205
+ + +IG K G + + VF+ M + N++ + ++I GY +G
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 206 DDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEV 265
+D + + +M G +PD T+ +F + + G+A Y +
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSL 438
Query: 266 INILGNAGQLNEAEEFVEKM 285
I+ LG AG+++EAE E+M
Sbjct: 439 IDGLGKAGRVDEAERLFEEM 458
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 8/188 (4%)
Query: 102 LCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
+ G+ ++AL L G G D Y LL + G E + + +
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRGDDGLLVFQ 213
V N L+G YGK G + ++VF +M NL ++ +I GY+ G + + +F+
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 214 QMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAG 273
+ K AG+ D + + M + GI+P Y +I+ G +
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Query: 274 QLNEAEEF 281
++ + ++
Sbjct: 599 TMDRSADY 606
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 99 LMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSF 154
L SLC GK +A+E++ G V D+ +Y + G L+ +H+ +K
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSAL---GKLKQISHIHDLFEKMKK 470
Query: 155 NG---EVEVNNRLIGMYGKCGGMKDARRVFDKMPER-----NLSSWCLMISGYTVNGRGD 206
+G ++ N LI +G+ G + +A +F+++ ER ++ S+ +I+ NG D
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEEL-ERSDCKPDIISYNSLINCLGKNGDVD 529
Query: 207 DGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVI 266
+ + F++M++ G+ PD T+ + FE M G P Y ++
Sbjct: 530 EAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Query: 267 NILGNAGQLNEAEEFVEKM 285
+ L G+ EA + KM
Sbjct: 590 DCLEKNGRTAEAVDLYSKM 608
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 102 LCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
+C+ GK +A+ E+ D Y +++ S +E G RV +++
Sbjct: 234 MCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 293
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPER-----NLSSWCLMISGYTVNGRGDDGLLVF 212
V +N +I + + G M+DA R+ D+MP+R +++ CL ++ + + L +F
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL----FSRLEKPSEILSLF 349
Query: 213 QQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNA 272
+M ++GV P +T+ +++MKE G P Y VI+ L
Sbjct: 350 GRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQK 409
Query: 273 GQLNEAEEFVEKM 285
G L+ A E+ E+M
Sbjct: 410 GMLDMAREYEEEM 422
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 14/215 (6%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ H + Y AL+ G E + + E L++ +V V N L+ Y + G
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 173 GMKDARRVFDKM------PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
A +F M P+R +S+ +M+ Y G D VF++MK+ G+ P ++
Sbjct: 349 YPYGAAEIFSLMQHMGCEPDR--ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 406
Query: 227 FXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKM- 285
+ M E G+ P ++N+ G GQ + E+ + +M
Sbjct: 407 HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME 466
Query: 286 --PLELGVDIWQALRNFARIHGDIDLEDRAEELLI 318
P + + L N I+G +R EEL +
Sbjct: 467 NGPCTADISTYNILIN---IYGKAGFLERIEELFV 498
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 19/230 (8%)
Query: 94 SSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
+ N + C+EG +QAL E++ HG Y +L+ +G++ R EFL
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM---NRAMEFL 368
Query: 150 KKSSFNGEV---EVNNRLIGMYGKCGGMKDARRVFDKMPERNLS----SWCLMISGYTVN 202
+ G L+ + + G M +A RV +M + S ++ +I+G+ V
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 203 GRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHY 262
G+ +D + V + MK+ G+ PD ++ M E GI P Y
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 263 LEVINILGNAGQLNEAEEFVEKMPLELGVD----IWQALRNFARIHGDID 308
+I + EA + E+M L +G+ + AL N + GD++
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEM-LRVGLPPDEFTYTALINAYCMEGDLE 537
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 14/215 (6%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ H + Y AL+ G E + + E L++ +V V N L+ Y + G
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 173 GMKDARRVFDKM------PERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGET 226
A +F M P+R +S+ +M+ Y G D VF++MK+ G+ P ++
Sbjct: 371 YPYGAAEIFSLMQHMGCEPDR--ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 428
Query: 227 FXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKM- 285
+ M E G+ P ++N+ G GQ + E+ + +M
Sbjct: 429 HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME 488
Query: 286 --PLELGVDIWQALRNFARIHGDIDLEDRAEELLI 318
P + + L N I+G +R EEL +
Sbjct: 489 NGPCTADISTYNILIN---IYGKAGFLERIEELFV 520
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 9/193 (4%)
Query: 101 SLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNG 156
SLC + K +A EL+G G + + Y AL+ G +E V E ++ +
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 157 EVEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRGDDGLLVF 212
N LI Y K + A V +KM ER ++ ++ +I G +G D +
Sbjct: 427 NTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 213 QQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNA 272
M G+ PD T+ F+S+++ G+ P Y +I+ A
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 273 GQLNEAEEFVEKM 285
G+++EA +EKM
Sbjct: 546 GKVDEAHLMLEKM 558
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 8/191 (4%)
Query: 103 CEEGKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEV 158
C G + A L+ G V D Y +++ S +E + + L++ N V
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 159 EVNNRLIGMYGKCGGMKDARRVFDKMPERNL----SSWCLMISGYTVNGRGDDGLLVFQQ 214
+ LI Y K G + +A + +KM +N ++ +I G +G+ + L+ ++
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 215 MKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQ 274
M + G++P T + F+ M G P Y I G+
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 275 LNEAEEFVEKM 285
L +AE+ + KM
Sbjct: 653 LLDAEDMMAKM 663
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 8/198 (4%)
Query: 96 NADLMSLCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N + LC+ LN ALE+ G AD+ Y L+ +SG R+ + K
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRGDD 207
+ V LI + K G + +AR ++ +M R N+ ++ +I+G+ ++G D
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 208 GLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVIN 267
+F M G PD T+ G F M G+ Y +I+
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 268 ILGNAGQLNEAEEFVEKM 285
AG+LN A++ +M
Sbjct: 368 GYCQAGKLNVAQKVFNRM 385
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 8/200 (4%)
Query: 94 SSNADLMSLCEEGKLNQALELMG---HGAVA-DSSVYLALLKLCEDSGSLESGKRVHEFL 149
+ N + +LC+EGK ++A +L G +G VA D Y +++ G + +
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM----PERNLSSWCLMISGYTVNGRG 205
KSS EV + N +I YG+ G A V + M + N+ + +I GY GR
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456
Query: 206 DDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEV 265
D V +M+ + PD T+ F ++ M G P Y E+
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTEL 516
Query: 266 INILGNAGQLNEAEEFVEKM 285
+ L G+L +AE + ++
Sbjct: 517 VRGLCWKGRLKKAESLLSRI 536
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N + SLCE+G++N AL+++ H G D Y +L+ SG+ R+ + +
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR 247
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRGDD 207
+ +V + LI +YGK G + +A++ +++M +R N+ ++ +I+G ++G D+
Sbjct: 248 MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDE 307
Query: 208 GLLVFQQMKQAGVEPDGETF 227
V + G P+ T+
Sbjct: 308 AKKVLNVLVSKGFFPNAVTY 327
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 99 LMSLCEEGKLNQA---LELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFN 155
L +LC+ G + +A E M + + +LL G L K V +K++
Sbjct: 209 LDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLE 268
Query: 156 GEVEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYT-VNGRGDDGLL 210
++ V L+ Y G M DA + + M +R N++ + ++I R D+ +
Sbjct: 269 PDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMR 328
Query: 211 VFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILG 270
VF +M++ G E D T+ G+ + M++ G+ P + Y++++
Sbjct: 329 VFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHE 388
Query: 271 NAGQLNEAEEFVEKM 285
Q E E +EKM
Sbjct: 389 KKEQFEECLELIEKM 403
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 92/235 (39%), Gaps = 43/235 (18%)
Query: 94 SSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSL-ESGKRVHEF 148
+SNA L LCE GKL++A E++G G V D Y L+ C L E+ + E
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 149 LKKS-------------------------SFNGEVEVNNRLIGMY-------GKCGG--M 174
+K+ F + + N L +Y G C
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 175 KDARRVFDKMPERNLSSWCL----MISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXX 230
++ + FD+M +N+ + +I Y +GR L + + MK G+ P+ T+
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 231 XXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKM 285
+ FE M+ G+ P HY +I+ G GQ+ + E + +M
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 103 CEEGKLNQALEL---MGHGAVA-DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEV 158
C G+L+ ALEL M H ++ +S+ Y +L+K +E K + E ++ V
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 159 EVNNRLIGMYGKCGGMKDARRVFDKMPERNLS----SWCLMISGYTVNGRGDDGLLVFQQ 214
LI YGK G M + +M +N+ ++ +MI GY +G + + +
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 215 MKQAGVEPDGETF 227
M++ G+ PD T+
Sbjct: 776 MREKGIVPDSITY 788
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 92/235 (39%), Gaps = 43/235 (18%)
Query: 94 SSNADLMSLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSL-ESGKRVHEF 148
+SNA L LCE GKL++A E++G G V D Y L+ C L E+ + E
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 149 LKKS-------------------------SFNGEVEVNNRLIGMY-------GKCGG--M 174
+K+ F + + N L +Y G C
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 175 KDARRVFDKMPERNLSSWCL----MISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXX 230
++ + FD+M +N+ + +I Y +GR L + + MK G+ P+ T+
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 231 XXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKM 285
+ FE M+ G+ P HY +I+ G GQ+ + E + +M
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 103 CEEGKLNQALEL---MGHGAVA-DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEV 158
C G+L+ ALEL M H ++ +S+ Y +L+K +E K + E ++ V
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 159 EVNNRLIGMYGKCGGMKDARRVFDKMPERNLS----SWCLMISGYTVNGRGDDGLLVFQQ 214
LI YGK G M + +M +N+ ++ +MI GY +G + + +
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 215 MKQAGVEPDGETF 227
M++ G+ PD T+
Sbjct: 776 MREKGIVPDSITY 788
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 84 QNQDTPFAASSSNADLMSLCEEGKLNQALEL---MGHGAVADS-SVYLALLKLCEDSGSL 139
+ D+ S+ + SL + G+L+ A +L M + S SV+ +L+ +G L
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 140 ESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLM 195
++ +V+ ++ + LI Y K G + A R++D+M + N + ++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 196 ISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGI 255
I + +G+ + + VF+ M++AG P T+ + SM G+
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 256 APCREHYLEVINILGNAGQLNEAEEFVEKM 285
P Y+ ++ +L N ++ A + + +M
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 61 PHLQKANNNTSIEPKLKLDQSVHQNQDTP-FAASSSNADLMSLCEEGKLNQAL----ELM 115
P L K+ ++ KL Q + + + P F+ SS D S+ + G+L+ ++ E+
Sbjct: 321 PSLAKSGR---LDAAFKLFQQMKERKLRPSFSVFSSLVD--SMGKAGRLDTSMKVYMEMQ 375
Query: 116 GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMK 175
G G ++++++L+ +G L++ R+ + +KKS F + +I + K G ++
Sbjct: 376 GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLE 435
Query: 176 DARRVFDKMPERNL----SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEP 222
A VF M + S++ ++ + +G+ D + ++ M AG+ P
Sbjct: 436 VAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 164 LIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRGDDGLLVFQQMKQAG 219
LI K G + +A+++F+ M + N + + ++I+G+ G D +F++M + G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 220 VEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAE 279
V PD +T+ G +F+ +KE G+ P Y +IN LG + +L EA
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 280 EFVEKMPLELGV 291
+M G+
Sbjct: 1017 VLFNEMKTSRGI 1028
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 5/196 (2%)
Query: 96 NADLMSLCEEGKLNQALELMGHGAVA-DSSVYLALLKLCEDSGSLESGKRVHEFLKKSSF 154
N + C+ G++N AL ++ +V+ D Y +L+ DSG L+ V + + +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 155 NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRGDDGLL 210
+V LI + G+ A ++ D+M +R ++ ++ ++++G GR D+ +
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 211 VFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILG 270
M +G +P+ T M G +P + +IN L
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 271 NAGQLNEAEEFVEKMP 286
G L A + +EKMP
Sbjct: 356 RKGLLGRAIDILEKMP 371
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Query: 94 SSNADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFL 149
+ NA + SLC++ + +A EL+ G AD Y L++ + +
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489
Query: 150 KKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL----SSWCLMISGYTVNGRG 205
K+ F ++ +NN LI + + MK++ R+F + L ++ MIS Y G
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549
Query: 206 DDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAP 257
D L F MK+ G PD T+ +E+M + G++P
Sbjct: 550 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 102 LCEEGKLNQALEL----MGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
C+ GK+ A EL + HG + D Y LL D+G LE + E L+KS +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRGDDGLLVFQ 213
+ + +I K G ++DA +F +P + N+ ++ +MISG G + ++ +
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 214 QMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNA 272
+M++ G P+ T+ E MK G + VI++L +A
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 139 LESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS----SWCL 194
LE+ R E +K + + N +I + + M +A ++F +M + S+
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 195 MISGYTVNGRGDDGLLVFQQMKQAGVEPDGETF 227
MI GY R DDGL +F++M+ +G+EP+ T+
Sbjct: 331 MIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 363
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 69 NTSIEPKLKLDQSVHQNQDTPFAASSSNADLMSLCEEGKLNQALEL---MGH-GAVADSS 124
N ++E + +H+ D +++S + C+ ++ AL++ MG G + +
Sbjct: 350 NPTVEDTILKFNKMHEELDVMPSSTSYEKLVKYSCDSNEVVTALDVVEKMGEAGLMISAD 409
Query: 125 VYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKM 184
+ +LL ++ + +R+H + S E +I + C +KD ++ +
Sbjct: 410 ILHSLLHAIDEVLEFDLVRRIHSIMCTKSVKPNTENFRSIIRL---CTRIKDFEGAYNML 466
Query: 185 P-------ERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXX 237
E N S + +++GY L+V +QMK+AGV+PD TF
Sbjct: 467 GNLKNFNLEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQE 526
Query: 238 XXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFV 282
++E MK+ G+ + Y+ +I+ +G+ +A++ +
Sbjct: 527 DAITK---YYEEMKQAGVQATKRIYMSLIDAYAASGKFEKAKQVL 568
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 16/218 (7%)
Query: 99 LMSLCEEGKLNQALEL---MGHGAVADSSVYLALL--KLCEDSGSLESGKRVHEFLKKSS 153
L L EE +LN A + M + + L +L LC + G++++G ++ + K
Sbjct: 128 LAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG 187
Query: 154 FNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS----SWCLMISGYTVNGRGDDGL 209
+ + LI + G + +A+++F +M E++ + ++ +I+G + D+ +
Sbjct: 188 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 210 LVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINIL 269
++MK G+EP+ T+ FE M G P Y +I L
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 270 GNAGQLNEAEEFVEKMPLELGVDIWQALRNFARIHGDI 307
++ EA E +++M L Q L+ A ++G +
Sbjct: 308 CKEQKIQEAVELLDRMNL-------QGLKPDAGLYGKV 338
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 8/198 (4%)
Query: 102 LCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
C+ GK+N+A +L+ G Y +++ L+ + E K
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRGDDGLLVFQ 213
V + + LI +GK G + +A + +++ ++ NL +W ++ ++ L+ FQ
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 214 QMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAG 273
MK+ P+ T+ F+ ++ M++ G+ P Y +I+ L AG
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 274 QLNEAEEFVEKMPLELGV 291
+ EA ++ GV
Sbjct: 777 NIAEAGALFDRFKANGGV 794
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Query: 165 IGMYGKCGGMKDARRVF---DKMPERNLSSWCLMISGYTVNGRGDDGLLVFQQMKQAGVE 221
I YG+ G + +A RVF ++ +R + + +MI Y ++ + +F+ M GV
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVT 537
Query: 222 PDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEF 281
PD T+ G + E M+E G Y VI+ GQLN AEE
Sbjct: 538 PDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 282 VEKM 285
++M
Sbjct: 598 YKEM 601
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 101 SLCEEGKLNQAL---ELMGHGAV-ADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNG 156
+ + G + QA+ E M + +S +Y +L+KL G L+ + ++ L +S
Sbjct: 619 AFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKT 678
Query: 157 E---VEVNNRLIGMYGKCGGMKDARRVFDKMPER---NLSSWCLMISGYTVNGRGDDGLL 210
+ V +N +I +Y + ++ A +FD M +R N ++ +M+ Y NGR ++
Sbjct: 679 QYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQ 738
Query: 211 VFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILG 270
+ +QM++ + D ++ F+ M GI P + + IL
Sbjct: 739 IAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILM 798
Query: 271 NAGQLNEAEEFVE---KMPLELGVDIW 294
G +A +E K ++ G+++W
Sbjct: 799 KLGMSKKAVRKIEEIRKKEIKRGLELW 825
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 8/198 (4%)
Query: 96 NADLMSLCEEGKLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N + LC+ +++ AL+L+ G D Y +L+ SG R+ + K
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 152 SSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS----SWCLMISGYTVNGRGDD 207
+V N LI K G + +A +++M R+L ++ L+I G + R D+
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 208 GLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVIN 267
+F M G PD T+ G F M + G+ Y +I
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 268 ILGNAGQLNEAEEFVEKM 285
AG+LN AEE +M
Sbjct: 370 GYCRAGKLNVAEEIFRRM 387
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Query: 91 AASSSNADLMSLCEEGKLNQALELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLK 150
S+ N + +LC+ G+++ A EL+ A D Y L+ G + + L+
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 151 KSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRGD 206
+ + N LI + G ++ A+R+ ++M + ++ ++ ++ G+ NG
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 207 DGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGF-MHFESMKEYGIAPCREHYLEV 265
V+ +M + G++PDG + F +H E + AP Y
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 266 INILGNAGQLNEAEEFVEKM 285
I+ L G L +A EF K+
Sbjct: 522 IDGLCKVGNLVKAIEFQRKI 541
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 11/204 (5%)
Query: 94 SSNADLMSLCEEGKLNQALELMGH-----GAVADSSVYLALLK-LCEDSGSLESGKRVHE 147
S N + C+EG++ AL + G D + L+ LC+ +G ++ + +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK-AGHVKHAIEIMD 319
Query: 148 FLKKSSFNGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNLS----SWCLMISGYTVNG 203
+ + ++ +V N +I K G +K+A V D+M R+ S ++ +IS
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 204 RGDDGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYL 263
+ ++ + + + G+ PD TF FE M+ G P Y
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 264 EVINILGNAGQLNEAEEFVEKMPL 287
+I+ L + G+L+EA +++M L
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMEL 463
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 119 AVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCGGMKDAR 178
V D + L+K C ++G +E + L + F+ V + LI K G ++ A+
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 179 RVFDKMPERNL----SSWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFXXXXXXX 234
+F +M + L ++ ++I+G NG G ++++M++ GV P+ T+
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 235 XXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEAEEFVEKM 285
F F+ M+E G++ Y +I L +LNEA + V++M
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 63/169 (37%), Gaps = 4/169 (2%)
Query: 113 ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNNRLIGMYGKCG 172
E+ G D +L C G L K LK + N L+ ++GK G
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 173 GMKDARRVFDKMPERNLS----SWCLMISGYTVNGRGDDGLLVFQQMKQAGVEPDGETFX 228
+A V +M E + ++ +++ Y G + V + M + GV P+ T+
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 229 XXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNE 277
F SMKE G P Y V+++LG + NE
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 9/199 (4%)
Query: 96 NADLMSLCEEGKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N + LC GK +ALEL+G G D Y L++ S L + + +K
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 152 SSF-NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL----SSWCLMISGYTVNGRGD 206
S + +V +I Y K G M++A + D M + ++ +++ GY G
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 207 DGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVI 266
+ +M G PD TF GF +E M G+ P Y +I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 267 NILGNAGQLNEAEEFVEKM 285
N L N +L +A E + ++
Sbjct: 390 NALCNENRLLKARELLGQL 408
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 9/199 (4%)
Query: 96 NADLMSLCEEGKLNQALELMG----HGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKK 151
N + LC GK +ALEL+G G D Y L++ S L + + +K
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 152 SSF-NGEVEVNNRLIGMYGKCGGMKDARRVFDKMPERNL----SSWCLMISGYTVNGRGD 206
S + +V +I Y K G M++A + D M + ++ +++ GY G
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 207 DGLLVFQQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVI 266
+ +M G PD TF GF +E M G+ P Y +I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 267 NILGNAGQLNEAEEFVEKM 285
N L N +L +A E + ++
Sbjct: 390 NALCNENRLLKARELLGQL 408
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 8/180 (4%)
Query: 107 KLNQALELMGH----GAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGEVEVNN 162
+L + +L+G G++ D + Y LL+ SGS++ V ++ + +
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 163 RLIGMYGKCGGMKDARRVFDKMPERNL----SSWCLMISGYTVNGRGDDGLLVFQQMKQA 218
L+ ++G+ G D R++F +M N +++ ++I + G + + +F M +
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 219 GVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNAGQLNEA 278
+EPD ET+ + M I P + Y VI G A EA
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 101 SLCEEGKLNQAL----ELMGHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNG 156
+ C+ GK+++A+ E+ G AD VY +L++ D G L+ GK + + + + +
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 157 EVEVNNRLIGMYGKCGGMKDARRVFDKMPER----NLSSWCLMISGYTVNGRGDDGLLVF 212
N LI + K G +K+A +F+ M ER N+ ++ +I G G+ + L +
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 213 QQMKQAGVEPDGETFXXXXXXXXXXXXXXXGFMHFESMKEYGIAPCREHYLEVINILGNA 272
M + EP+ T+ E MK+ P Y ++ L
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 273 GQLNEAEEFVEKM 285
G L+EA + + M
Sbjct: 401 GDLDEASKLLYLM 413
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 102 LCEEGKLNQALELM----GHGAVADSSVYLALLKLCEDSGSLESGKRVHEFLKKSSFNGE 157
E G + +A++ HG ++ V +L+K G LE +RV++ +K S +
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 158 VEVNNRLIGMYGKCGGMKDARRVFDKMPER---NLSSWCLMISGYTVNGRGDDGLLVFQQ 214
V +N ++ + G + +A +F+ + E+ ++ S+ M+ Y G D+ + V ++
Sbjct: 690 VAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEE 749
Query: 215 MKQAGVEPDGETF 227
M+++G+ D +F
Sbjct: 750 MRESGLLSDCTSF 762