Miyakogusa Predicted Gene

Lj2g3v0910610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0910610.1 CUFF.35641.1
         (240 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29520.1 | Symbols:  | LOCATED IN: endoplasmic reticulum, pla...   255   2e-68

>AT4G29520.1 | Symbols:  | LOCATED IN: endoplasmic reticulum, plasma
           membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
           DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
           Saposin B (InterPro:IPR008139); Has 137 Blast hits to
           137 proteins in 50 species: Archae - 2; Bacteria - 0;
           Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0;
           Other Eukaryotes - 48 (source: NCBI BLink). |
           chr4:14494056-14495657 REVERSE LENGTH=306
          Length = 306

 Score =  255 bits (651), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 126/206 (61%), Positives = 149/206 (72%)

Query: 13  AENVCNLKKVEADWILRIDIVEKGDRLELEEHDSEGQCNSECKTIERACQEVIGYSDTDV 72
           AENVCNLKK EADW+L+IDIVEKGD L L E   EG CNS+CKTIE ACQ+VIGYSDTDV
Sbjct: 80  AENVCNLKKEEADWMLKIDIVEKGDNLVLVEQQEEGMCNSKCKTIENACQKVIGYSDTDV 139

Query: 73  AEYLYKSKSDIDSLFNYLCKDLTKACSTKPPPVPKDRTPGEPFVAKSSKEAEMEKLLKSM 132
           AEY+YKSK D+ SL N+LCKDLT ACS KPPPVPKDR PGEPFVAK SK+AEM+K+L+SM
Sbjct: 140 AEYIYKSKPDLVSLVNHLCKDLTDACSKKPPPVPKDRVPGEPFVAKPSKDAEMDKILRSM 199

Query: 133 EGMPGAPGMKMYSRDDLMNMKNFGGXXXXXXXXXXXXQASFPSKLGKVLRDKESGKSDWK 192
           +GMPGAPGMK+YSR+D+                       FP  LGKVL++KES   + K
Sbjct: 200 QGMPGAPGMKVYSREDIEKGNIGNEDDDGDDDEDEEEDDKFPKNLGKVLKEKESKTEELK 259

Query: 193 QLIKKGITDTSMTLKKHANRISNHVQ 218
           + I K        LK+HA ++SN V+
Sbjct: 260 KTITKEFKKKGEALKRHAQKVSNRVR 285