Miyakogusa Predicted Gene

Lj2g3v0909570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0909570.1 tr|Q75T80|Q75T80_PHAVU Starch synthase I
(Precursor) OS=Phaseolus vulgaris GN=pvss1 PE=2 SV=1,65.95,0,STARCH
SYNTHASE,NULL; GLYCOSYLTRANSFERASE,NULL;
UDP-Glycosyltransferase/glycogen phosphorylase,NULL;,CUFF.35639.1
         (304 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24300.2 | Symbols: SSI1 | Glycogen/starch synthases, ADP-glu...   324   4e-89
AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | Glycogen/starch syntha...   324   4e-89
AT3G01180.1 | Symbols: AtSS2, SS2 | starch synthase 2 | chr3:624...   166   2e-41
AT1G32900.1 | Symbols:  | UDP-Glycosyltransferase superfamily pr...   139   4e-33
AT1G11720.2 | Symbols: SS3 | starch synthase 3 | chr1:3951597-39...    62   7e-10
AT1G11720.1 | Symbols: ATSS3, SS3 | starch synthase 3 | chr1:395...    62   7e-10

>AT5G24300.2 | Symbols: SSI1 | Glycogen/starch synthases,
           ADP-glucose type | chr5:8266934-8270860 FORWARD
           LENGTH=652
          Length = 652

 Score =  324 bits (831), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 167/306 (54%), Positives = 200/306 (65%), Gaps = 42/306 (13%)

Query: 30  IAQLGFPSFLKRAAKNANLRAFPVDNEGGVAASQDDPFAFEDEQVKALPLSTEMDDFGSI 89
           IA LGFP F +R +   +L      +  G +   D+     D          E D  GS+
Sbjct: 27  IASLGFPRFRRRFSIGRSLLLRRSSSFSGDSRESDEERFITD---------AERDGSGSV 77

Query: 90  VGFHL---------GSENGKITEEDSTSDGVEE------------------------KAK 116
           +GF L          +  G+IT  +   + +++                          K
Sbjct: 78  LGFQLTPPGDQQTVSTSTGEITHHEEKKEAIDQIVMADFGVPGNRAVEEGAAEVGIPSGK 137

Query: 117 ARVCYNIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYIHGTPGDSKFSG 176
           A V  N+VFVTSEAAPYSKTGGLGDVCGSLPIALA RGHRVMV+SPRY++GT  D  ++ 
Sbjct: 138 AEVVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYAR 197

Query: 177 AIDLERRINVPCFGGAQEVGFFHECREGVDWVFVDHPSFHRPGNPYGDKNGPFGDNQFRF 236
           A DL  R+ V CFGG+QEV F+HE R+GVDWVFVDH S+HRPGNPYGD  G FGDNQFRF
Sbjct: 198 AKDLGIRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRF 257

Query: 237 TLLCYAACEAPLVLHLGGLTYGEKCLFIVNDWHASLVPVLLAAKYRPHGVYKDARSVLVI 296
           TLLC+AACEAPLVL LGG TYGEK LF+VNDWHA LVP+LLAAKYRP+GVYKDARS+L+I
Sbjct: 258 TLLCHAACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILII 317

Query: 297 HNIAHQ 302
           HN+AHQ
Sbjct: 318 HNLAHQ 323


>AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | Glycogen/starch
           synthases, ADP-glucose type | chr5:8266934-8270860
           FORWARD LENGTH=652
          Length = 652

 Score =  324 bits (831), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 167/306 (54%), Positives = 200/306 (65%), Gaps = 42/306 (13%)

Query: 30  IAQLGFPSFLKRAAKNANLRAFPVDNEGGVAASQDDPFAFEDEQVKALPLSTEMDDFGSI 89
           IA LGFP F +R +   +L      +  G +   D+     D          E D  GS+
Sbjct: 27  IASLGFPRFRRRFSIGRSLLLRRSSSFSGDSRESDEERFITD---------AERDGSGSV 77

Query: 90  VGFHL---------GSENGKITEEDSTSDGVEE------------------------KAK 116
           +GF L          +  G+IT  +   + +++                          K
Sbjct: 78  LGFQLTPPGDQQTVSTSTGEITHHEEKKEAIDQIVMADFGVPGNRAVEEGAAEVGIPSGK 137

Query: 117 ARVCYNIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYIHGTPGDSKFSG 176
           A V  N+VFVTSEAAPYSKTGGLGDVCGSLPIALA RGHRVMV+SPRY++GT  D  ++ 
Sbjct: 138 AEVVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYAR 197

Query: 177 AIDLERRINVPCFGGAQEVGFFHECREGVDWVFVDHPSFHRPGNPYGDKNGPFGDNQFRF 236
           A DL  R+ V CFGG+QEV F+HE R+GVDWVFVDH S+HRPGNPYGD  G FGDNQFRF
Sbjct: 198 AKDLGIRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRF 257

Query: 237 TLLCYAACEAPLVLHLGGLTYGEKCLFIVNDWHASLVPVLLAAKYRPHGVYKDARSVLVI 296
           TLLC+AACEAPLVL LGG TYGEK LF+VNDWHA LVP+LLAAKYRP+GVYKDARS+L+I
Sbjct: 258 TLLCHAACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILII 317

Query: 297 HNIAHQ 302
           HN+AHQ
Sbjct: 318 HNLAHQ 323


>AT3G01180.1 | Symbols: AtSS2, SS2 | starch synthase 2 |
           chr3:62456-65678 REVERSE LENGTH=792
          Length = 792

 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/183 (50%), Positives = 113/183 (61%), Gaps = 12/183 (6%)

Query: 122 NIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYIHGTPGDSKFSGAIDLE 181
           N++ V +E AP+SKTGGLGDV G+LP +LA RGHRVMVV PRY       ++++ A DL 
Sbjct: 302 NVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRY-------AEYAEAKDLG 354

Query: 182 RRINVPCFGGAQEVGFFHECREGVDWVFVDHPSF-HRPGNPYGDKNGPFGDNQFRFTLLC 240
            R      G   EV +FH   +GVD+VF+D P F H   N YG   G   D   R  L C
Sbjct: 355 VRKRYKVAGQDMEVMYFHAFIDGVDFVFIDSPEFRHLSNNIYG---GNRLDILKRMVLFC 411

Query: 241 YAACEAPLVLHLGGLTYGEKCL-FIVNDWHASLVPVLLAAKYRPHGVYKDARSVLVIHNI 299
            AA E P  +  GG+ YG+  L FI NDWH +L+PV L A YR HG+ K  RSVLVIHNI
Sbjct: 412 KAAVEVPWYVPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNI 471

Query: 300 AHQ 302
           AHQ
Sbjct: 472 AHQ 474


>AT1G32900.1 | Symbols:  | UDP-Glycosyltransferase superfamily
           protein | chr1:11920582-11923506 REVERSE LENGTH=610
          Length = 610

 Score =  139 bits (349), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/193 (45%), Positives = 114/193 (59%), Gaps = 19/193 (9%)

Query: 122 NIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYIHGTPGDSKFSGAIDLE 181
           +++F+ +E  P+SKTGGLGDV G LP ALAARGHRVM + PRY        ++  A D  
Sbjct: 85  SVIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRY-------DQYKDAWDTC 137

Query: 182 RRINVPCFGGAQEVGFFHECREGVDWVFVDHPSF-----HRPGNP-YGDKNG-PFGDNQF 234
             + +      + V FFH  + GVD VFVDHP F      + G+  YG   G  + DNQ 
Sbjct: 138 VVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVVGKTGSKIYGPITGVDYNDNQL 197

Query: 235 RFTLLCYAACEAPLVLHLGGLT-----YGEKCLFIVNDWHASLVPVLLAAKYRPHGVYKD 289
           RF+LLC AA EAP VL+L         YGE  +F+ NDWH +L+P  L + Y+  GVY +
Sbjct: 198 RFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSRGVYMN 257

Query: 290 ARSVLVIHNIAHQ 302
           A+ V  IHNIA+Q
Sbjct: 258 AKVVFCIHNIAYQ 270


>AT1G11720.2 | Symbols: SS3 | starch synthase 3 |
           chr1:3951597-3956840 FORWARD LENGTH=1094
          Length = 1094

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 79/188 (42%), Gaps = 28/188 (14%)

Query: 122 NIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRY---IHGTPGDSKFSGAI 178
           +IV +  E AP +K GGLGDV  SL  A+    H V +V P+Y    H    D +F    
Sbjct: 647 HIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIVFPKYDCIKHNFVKDLQF---- 702

Query: 179 DLERRINVPCFGGAQEVGFFHECREGVDWVFVDHPSFHRPGNPYGDKNGPFG--DNQFRF 236
                 N     G  E+  +H   EG+   F+D      P N    +   +G  D+  RF
Sbjct: 703 ------NRSYHWGGTEIKVWHGKVEGLSVYFLD------PQNGLFQRGCVYGCADDAGRF 750

Query: 237 TLLCYAACEAPLVLHLGGLTYGEKCLFIVNDWHASLVPVLLAAKYRPHGVYKDARSVLVI 296
              C+AA E    L  GG       +   +DW ++ V  L    Y  +G+ K  R V  I
Sbjct: 751 GFFCHAALE---FLLQGGF---HPDILHCHDWSSAPVSWLFKDHYTQYGLIK-TRIVFTI 803

Query: 297 HNIAHQVN 304
           HN+    N
Sbjct: 804 HNLEFGAN 811


>AT1G11720.1 | Symbols: ATSS3, SS3 | starch synthase 3 |
           chr1:3952460-3956840 FORWARD LENGTH=1042
          Length = 1042

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 79/188 (42%), Gaps = 28/188 (14%)

Query: 122 NIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRY---IHGTPGDSKFSGAI 178
           +IV +  E AP +K GGLGDV  SL  A+    H V +V P+Y    H    D +F    
Sbjct: 595 HIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIVFPKYDCIKHNFVKDLQF---- 650

Query: 179 DLERRINVPCFGGAQEVGFFHECREGVDWVFVDHPSFHRPGNPYGDKNGPFG--DNQFRF 236
                 N     G  E+  +H   EG+   F+D      P N    +   +G  D+  RF
Sbjct: 651 ------NRSYHWGGTEIKVWHGKVEGLSVYFLD------PQNGLFQRGCVYGCADDAGRF 698

Query: 237 TLLCYAACEAPLVLHLGGLTYGEKCLFIVNDWHASLVPVLLAAKYRPHGVYKDARSVLVI 296
              C+AA E    L  GG       +   +DW ++ V  L    Y  +G+ K  R V  I
Sbjct: 699 GFFCHAALE---FLLQGGF---HPDILHCHDWSSAPVSWLFKDHYTQYGLIK-TRIVFTI 751

Query: 297 HNIAHQVN 304
           HN+    N
Sbjct: 752 HNLEFGAN 759