Miyakogusa Predicted Gene

Lj2g3v0894320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0894320.1 Non Chatacterized Hit- tr|D8TA08|D8TA08_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,36.09,5e-18,seg,NULL; no description,Six-bladed
beta-propeller, TolB-like; NHL REPEAT-CONTAINING PROTEIN,NULL;
F,CUFF.35609.1
         (257 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23890.1 | Symbols:  | NHL domain-containing protein | chr1:8...   256   9e-69
AT1G23890.2 | Symbols:  | NHL domain-containing protein | chr1:8...   233   1e-61
AT5G14890.1 | Symbols:  | NHL domain-containing protein | chr5:4...   125   4e-29
AT1G70280.2 | Symbols:  | NHL domain-containing protein | chr1:2...   124   7e-29
AT1G70280.1 | Symbols:  | NHL domain-containing protein | chr1:2...   124   8e-29
AT1G23880.1 | Symbols:  | NHL domain-containing protein | chr1:8...   123   1e-28
AT3G14860.2 | Symbols:  | NHL domain-containing protein | chr3:4...   119   2e-27
AT3G14860.1 | Symbols:  | NHL domain-containing protein | chr3:4...   119   2e-27

>AT1G23890.1 | Symbols:  | NHL domain-containing protein |
           chr1:8439321-8440803 REVERSE LENGTH=261
          Length = 261

 Score =  256 bits (654), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 126/232 (54%), Positives = 164/232 (70%), Gaps = 2/232 (0%)

Query: 26  VHGKVVIPEDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQES 85
           V GK+V+ E+GY VTTV+DGHK  +NPY++   PGSS+LIVLDS  S FYT  FP+S +S
Sbjct: 19  VSGKIVL-EEGYEVTTVVDGHKSGLNPYTIHALPGSSNLIVLDSSGSTFYTTSFPLSVDS 77

Query: 86  VFTKFSGNGSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANG-VTTIA 144
           V  +F+G+GS G+ DG  G ++F KPR FA D +GN+YVAD+SN+AIRKI+++G VTTIA
Sbjct: 78  VINRFAGDGSSGHVDGKAGNSRFSKPRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTIA 137

Query: 145 GGFSEKSSRQDGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDCTLGSKS 204
           GG S+    +DGPA NA+ S+DFE++F+P  C LLVSDH ++++ QINL E+DC   S S
Sbjct: 138 GGISKAFGHRDGPAQNATFSSDFEITFVPQRCCLLVSDHGNEMIRQINLKEEDCLENSHS 197

Query: 205 GLGAVMTWTXXXXXXXXXXXVIGIAVRPYIIPHTGRFQPLPFHRDMEALPNQ 256
            LG    W+            IG AVRPY+I HTGR +P   H DMEA PNQ
Sbjct: 198 NLGTYSLWSIGIVLSCILGVAIGFAVRPYVIRHTGRSEPPLVHHDMEASPNQ 249


>AT1G23890.2 | Symbols:  | NHL domain-containing protein |
           chr1:8438900-8440803 REVERSE LENGTH=400
          Length = 400

 Score =  233 bits (594), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 114/213 (53%), Positives = 151/213 (70%), Gaps = 2/213 (0%)

Query: 26  VHGKVVIPEDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQES 85
           V GK+V+ E+GY VTTV+DGHK  +NPY++   PGSS+LIVLDS  S FYT  FP+S +S
Sbjct: 19  VSGKIVL-EEGYEVTTVVDGHKSGLNPYTIHALPGSSNLIVLDSSGSTFYTTSFPLSVDS 77

Query: 86  VFTKFSGNGSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANG-VTTIA 144
           V  +F+G+GS G+ DG  G ++F KPR FA D +GN+YVAD+SN+AIRKI+++G VTTIA
Sbjct: 78  VINRFAGDGSSGHVDGKAGNSRFSKPRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTIA 137

Query: 145 GGFSEKSSRQDGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDCTLGSKS 204
           GG S+    +DGPA NA+ S+DFE++F+P  C LLVSDH ++++ QINL E+DC   S S
Sbjct: 138 GGISKAFGHRDGPAQNATFSSDFEITFVPQRCCLLVSDHGNEMIRQINLKEEDCLENSHS 197

Query: 205 GLGAVMTWTXXXXXXXXXXXVIGIAVRPYIIPH 237
            LG    W+            IG AVRPY+I H
Sbjct: 198 NLGTYSLWSIGIVLSCILGVAIGFAVRPYVIRH 230


>AT5G14890.1 | Symbols:  | NHL domain-containing protein |
           chr5:4818056-4821534 FORWARD LENGTH=754
          Length = 754

 Score =  125 bits (313), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 101/170 (59%), Gaps = 9/170 (5%)

Query: 34  EDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQESVFTKFSGN 93
           E GY + TV DG K  I PY++   P   +LIVLDS NS  + +  P+S+       SG+
Sbjct: 75  ESGYNMETVFDGSKLGIEPYAIEVSPNGGELIVLDSENSNIHKISMPLSRYGKPKLLSGS 134

Query: 94  --GSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIAGGFSEKS 151
             G  G+ DG +  A+ ++PR  A D RGN+YVAD  N AIRKI+ +GV+TIA G     
Sbjct: 135 QEGYTGHVDGKLKEARMNRPRGLAMDDRGNIYVADTINMAIRKISDDGVSTIAAG----- 189

Query: 152 SRQDGPANNASL--SNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDCT 199
            R  G +   S+  S+DF+L ++   C+LLV D  +QL+ +I L++ DC+
Sbjct: 190 GRWSGGSKEESMRFSDDFDLIYVSSSCSLLVIDRGNQLIKEIQLHDHDCS 239


>AT1G70280.2 | Symbols:  | NHL domain-containing protein |
           chr1:26466086-26468471 REVERSE LENGTH=509
          Length = 509

 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 105/176 (59%), Gaps = 4/176 (2%)

Query: 34  EDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQESVFTKFSGN 93
           E+GY+V TV DG K  I PYS+   P + +L++LDS NS  Y +   +S  S     +G+
Sbjct: 67  ENGYSVETVFDGSKLGIEPYSIEVLP-NGELLILDSENSNIYKISSSLSLYSRPRLVTGS 125

Query: 94  --GSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIAGGFSEKS 151
             G PG+ DG +  A+ + P+    D RGN+YVAD  N AIRKI+  GVTTIAGG + ++
Sbjct: 126 PEGYPGHVDGRLRDAKLNHPKGLTVDDRGNIYVADTVNNAIRKISEGGVTTIAGGKTVRN 185

Query: 152 SRQ-DGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDCTLGSKSGL 206
               DGP+ +A  SNDF++ ++   C+LLV D  ++ + +I L+  DC     SG 
Sbjct: 186 GGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNKAIREIQLHFDDCAYQYGSGF 241


>AT1G70280.1 | Symbols:  | NHL domain-containing protein |
           chr1:26466086-26468116 REVERSE LENGTH=447
          Length = 447

 Score =  124 bits (310), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 105/176 (59%), Gaps = 4/176 (2%)

Query: 34  EDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQESVFTKFSGN 93
           E+GY+V TV DG K  I PYS+   P + +L++LDS NS  Y +   +S  S     +G+
Sbjct: 5   ENGYSVETVFDGSKLGIEPYSIEVLP-NGELLILDSENSNIYKISSSLSLYSRPRLVTGS 63

Query: 94  --GSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIAGGFSEKS 151
             G PG+ DG +  A+ + P+    D RGN+YVAD  N AIRKI+  GVTTIAGG + ++
Sbjct: 64  PEGYPGHVDGRLRDAKLNHPKGLTVDDRGNIYVADTVNNAIRKISEGGVTTIAGGKTVRN 123

Query: 152 SRQ-DGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDCTLGSKSGL 206
               DGP+ +A  SNDF++ ++   C+LLV D  ++ + +I L+  DC     SG 
Sbjct: 124 GGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNKAIREIQLHFDDCAYQYGSGF 179


>AT1G23880.1 | Symbols:  | NHL domain-containing protein |
           chr1:8436125-8438636 FORWARD LENGTH=545
          Length = 545

 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 4/168 (2%)

Query: 34  EDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQESVFTKFSGN 93
           E+GY+V TVLDG K  I PYS+ Q   + +L++LDS NS  Y +   +S  S     +G+
Sbjct: 129 ENGYSVETVLDGSKLGIEPYSI-QVLSNGELLILDSQNSNIYQISSSLSLYSRPRLVTGS 187

Query: 94  --GSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIAGG-FSEK 150
             G PG+ DG +  A+ + P+    D RGN+YVAD  N AIRKI+  GVTTIAGG     
Sbjct: 188 PEGYPGHVDGRLRDARLNNPKGLTVDDRGNIYVADTVNNAIRKISEAGVTTIAGGKMVRG 247

Query: 151 SSRQDGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDC 198
               DGP+ +A  SNDF++ ++   C+LLV D  +Q + +I L+  DC
Sbjct: 248 GGHVDGPSEDAKFSNDFDVVYLGSSCSLLVIDRGNQAIREIQLHFDDC 295


>AT3G14860.2 | Symbols:  | NHL domain-containing protein |
           chr3:4998591-5000894 REVERSE LENGTH=493
          Length = 493

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 102/167 (61%), Gaps = 3/167 (1%)

Query: 34  EDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQESVFTKFSGN 93
           E+GY V TV++G+   + PY + +     +L  +D +NS    +  P+SQ S     +G+
Sbjct: 74  ENGYLVETVVEGNDIGVVPYKI-RVSDDGELYAVDELNSNIMKITPPLSQYSRGRLVAGS 132

Query: 94  --GSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIAGGFSEKS 151
             G  G++DG    A+F+ PR    D +GN+YVAD  N AIRKI  +GVTTIAGG S  +
Sbjct: 133 FQGKTGHADGKPSEARFNHPRGVTMDDKGNVYVADTLNLAIRKIGDSGVTTIAGGKSNIA 192

Query: 152 SRQDGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDC 198
             +DGP+ +A  SNDF++ ++   C+LLV D  +  + QI+L+E+DC
Sbjct: 193 GYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLSEEDC 239


>AT3G14860.1 | Symbols:  | NHL domain-containing protein |
           chr3:4998591-5000894 REVERSE LENGTH=492
          Length = 492

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 102/167 (61%), Gaps = 3/167 (1%)

Query: 34  EDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQESVFTKFSGN 93
           E+GY V TV++G+   + PY + +     +L  +D +NS    +  P+SQ S     +G+
Sbjct: 74  ENGYLVETVVEGNDIGVVPYKI-RVSDDGELYAVDELNSNIMKITPPLSQYSRGRLVAGS 132

Query: 94  --GSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIAGGFSEKS 151
             G  G++DG    A+F+ PR    D +GN+YVAD  N AIRKI  +GVTTIAGG S  +
Sbjct: 133 FQGKTGHADGKPSEARFNHPRGVTMDDKGNVYVADTLNLAIRKIGDSGVTTIAGGKSNIA 192

Query: 152 SRQDGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDC 198
             +DGP+ +A  SNDF++ ++   C+LLV D  +  + QI+L+E+DC
Sbjct: 193 GYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLSEEDC 239