Miyakogusa Predicted Gene
- Lj2g3v0891260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0891260.1 Non Chatacterized Hit- tr|I1NW04|I1NW04_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,48.94,0.0000000000002,DUF1005,Protein of unknown function
DUF1005; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NU,CUFF.35601.1
(420 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29310.1 | Symbols: | Protein of unknown function (DUF1005) ... 513 e-145
AT1G10020.1 | Symbols: | Protein of unknown function (DUF1005) ... 374 e-104
AT3G19680.1 | Symbols: | Protein of unknown function (DUF1005) ... 308 6e-84
AT1G50040.1 | Symbols: | Protein of unknown function (DUF1005) ... 280 1e-75
AT5G17640.1 | Symbols: | Protein of unknown function (DUF1005) ... 250 1e-66
>AT4G29310.1 | Symbols: | Protein of unknown function (DUF1005) |
chr4:14437892-14439609 REVERSE LENGTH=424
Length = 424
Score = 513 bits (1320), Expect = e-145, Method: Compositional matrix adjust.
Identities = 265/425 (62%), Positives = 308/425 (72%), Gaps = 13/425 (3%)
Query: 1 MDPCPFVRLTVESLALKLPVATKPAPVSG-VHPSTTPCFCKIRFHVFPSQTAXXXXXXXX 59
MDPCPFVRLT++SLAL+LP + G VHPS+TPC+CK+R FPSQ A
Sbjct: 1 MDPCPFVRLTIDSLALRLPETATNKQIGGEVHPSSTPCYCKLRIKHFPSQKALLPLSSFS 60
Query: 60 XXXX--XXXXXAAGFHLGPAALKRLSGKPVALRVSVYSGSMGRTCGVSGAKLLGRVTVSV 117
A GFHL A++R+SGK ++LRVSVY+G G TCGV+ KLLG+V V+V
Sbjct: 61 DASSPPESSTSAPGFHLDADAIRRISGKKISLRVSVYAGRTGHTCGVASGKLLGKVEVAV 120
Query: 118 DLAGAMSRPATFHGGWQRLGKKQREPEHKPSARLHLVVRTEPDPRFVFQFGGEPECSPVV 177
DLA A+SR FH GW++LG KPSARLHL+V EPDPRFVFQFGGEPECSPVV
Sbjct: 121 DLAAALSRTVAFHNGWKKLGGDG----DKPSARLHLLVCAEPDPRFVFQFGGEPECSPVV 176
Query: 178 FQIQENIRQPVFSCKFSADRNCRSRSLPSDFTNKPSRW-RRTLKSVR--DRHGRERKGWM 234
+QIQ+N++QPVFSCKFS+DRN RSRSLPS FT W RTL + + RERKGWM
Sbjct: 177 YQIQDNLKQPVFSCKFSSDRNGRSRSLPSGFTYSSRGWITRTLSGDQWEKKQARERKGWM 236
Query: 235 IMIHDLSGSPVAAASMITPFVPSPGSDRVSRSNPGAWLILRPNGASVSSWKPWGRLEAWR 294
I IHDLSGSPVAAASMITPFV SPGSDRVSRSNPGAWLILRP+G VSSWKPWGRLEAWR
Sbjct: 237 ITIHDLSGSPVAAASMITPFVASPGSDRVSRSNPGAWLILRPHGTCVSSWKPWGRLEAWR 296
Query: 295 ERGSEDGLGYKFALVTENGPVSGIPIAEGTLNVKKGGQFCIDYKVMKDHGLSARL--PGK 352
ERG+ DGLGYKF LV +N +GIPIAEGT++ K+GG+F ID +V G S + P K
Sbjct: 297 ERGAIDGLGYKFELVRDNSTSTGIPIAEGTMSTKQGGKFSIDRRV-SGQGESPAISSPVK 355
Query: 353 GFVMGSTVEGEGKMSKPVVQVGAQHVTCMXXXXXXXXXXXXXXXXMDACQLFSQKLRKEL 412
GFVMGS+VEGEGK+SKPVV VGAQHVTCM +DACQLFS+KLRKEL
Sbjct: 356 GFVMGSSVEGEGKVSKPVVHVGAQHVTCMADAALFVALSAAVDLSVDACQLFSRKLRKEL 415
Query: 413 YHHEE 417
H ++
Sbjct: 416 CHDDQ 420
>AT1G10020.1 | Symbols: | Protein of unknown function (DUF1005) |
chr1:3269939-3271732 REVERSE LENGTH=461
Length = 461
Score = 374 bits (960), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/465 (45%), Positives = 271/465 (58%), Gaps = 57/465 (12%)
Query: 1 MDPCPFVRLTVESLALKLPVATKPAPVSGVHPSTTPCFCKIRFHVFPSQTAXXXXXXXXX 60
MDPCPF+RLT+ +LALK+P+A K S+ CFCKI+ FP QTA
Sbjct: 1 MDPCPFIRLTIGNLALKVPLAAKTTSSVVHPSSSP-CFCKIKLKNFPPQTAAIPYIPLET 59
Query: 61 XXX-XXXXXAAGFHLGPAALKRLSGKPV-----ALRVSVYSGSMGRTCGVSGAKLLGRVT 114
AA FHL + ++RL+ + + L++ +Y+G G CGV +LL +V+
Sbjct: 60 TQFPEIQTLAATFHLSSSDIQRLASRSIFTSKPCLKILIYTGRAGAACGVHSGRLLAKVS 119
Query: 115 VSVDLAGAMSRPATFHGGWQRLGKKQREPEHKPSARLHLVVRTEPDPRFVFQFGGEPECS 174
V +DL+G S+P FH GW +GK + SA+ HL V+ EPDPRFVFQF GEPECS
Sbjct: 120 VPLDLSGTQSKPCVFHNGWISVGKGAGKSSS--SAQFHLNVKAEPDPRFVFQFDGEPECS 177
Query: 175 PVVFQIQENIRQPVFSCKFS----ADRNCRSRSLPSDFTNKPSRWRRTLKSVRDRHGRER 230
P V QIQ NIRQPVF+CKFS DR RSRSLP++ T+ W + S R+R G+ER
Sbjct: 178 PQVVQIQGNIRQPVFTCKFSCRHTGDRTQRSRSLPTE-TSVSRSWLNSFGSERERPGKER 236
Query: 231 KGWMIMIHDLSGSPVAAASMITPFVPSPGSDRVSRSNPGAWLILRPNGASVSSWKPWGRL 290
KGW I +HDLSGSPVA AS++TPFV SPG+DRVSRSNPG+WLILRP +W+PWGRL
Sbjct: 237 KGWSITVHDLSGSPVAMASIVTPFVASPGTDRVSRSNPGSWLILRPGDC---TWRPWGRL 293
Query: 291 EAWRER-GSEDGLGYKFALVTENGPVSGIPIAEGTLNVKKGGQFCIDYKVMKD------- 342
EAWRER G+ DGLGY+F L+ + +GI +AE T++ +GG+F I+
Sbjct: 294 EAWRERGGATDGLGYRFELIPDGSSGAGIVLAESTISSHRGGKFSIELGSSPSSSSPTSV 353
Query: 343 --------------------------------HGLSARLPGKGFVMGSTVEGEGKMSKPV 370
+GL KGFVM ++VEGEGK SKP
Sbjct: 354 VNRSRSRRGGSSGSGGGASPANSPRGGSGDYGYGLWPWNVYKGFVMSASVEGEGKCSKPC 413
Query: 371 VQVGAQHVTCMXXXXXXXXXXXXXXXXMDACQLFSQKLRKELYHH 415
V+V QHV+CM MDAC+LF+Q++RKEL H
Sbjct: 414 VEVSVQHVSCMEDAAAYVALSAAIDLSMDACRLFNQRMRKELCHE 458
>AT3G19680.1 | Symbols: | Protein of unknown function (DUF1005) |
chr3:6840448-6842107 FORWARD LENGTH=491
Length = 491
Score = 308 bits (788), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 194/492 (39%), Positives = 250/492 (50%), Gaps = 80/492 (16%)
Query: 1 MDPCPFVRLTVESLALKLPVATKPAPVSG------VHPSTTPCFCKIRFHVFPSQTAX-- 52
MDPC FVR+ V +LA++ P ++ + S ++P+ C+CKIRF FP +
Sbjct: 1 MDPCSFVRIIVGNLAVRFPSSSSSSSSSSGPSVSGINPTAPNCYCKIRFKNFPREIVSVP 60
Query: 53 ------XXXXXXXXXXXXXXXXAAGFHLGPAALKRLSGKP--VALRVSVYS--------G 96
AA F L A ++ KP L V YS G
Sbjct: 61 VMFRTESESETRCSSSGNVSTVAACFSLSKAQIEASLKKPKFSVLSVEAYSRGNSDGDDG 120
Query: 97 SMGRTCGVS--GAKLLGRVTVSVDLAGAMSRPATFHGGWQRLGKKQREPEHKPSARLHLV 154
G +CG++ G KLLGR VS+DL A ++ H GW L K+ + + LH+
Sbjct: 121 VSGASCGLATAGEKLLGRFEVSLDLKSAETKSFLAHNGWVALPSKKTKSKTGSDPELHVS 180
Query: 155 VRTEPDPRFVFQFGGEPECSPVVFQIQENIRQPVFSCKF------SADRNCRSRSLPSDF 208
VR EPDPRFVFQF GEPECSP VFQ+Q N +Q VF+CKF S DRN S
Sbjct: 181 VRVEPDPRFVFQFDGEPECSPQVFQVQGNTKQAVFTCKFGSRNSNSGDRNLLHSSSMMSE 240
Query: 209 TNKPSRWRRTLKSVRDRHGRERKGWMIMIHDLSGSPVAAASMITPFVPSPGSDRVSRSNP 268
+ ++ S +++ +ERKGW I +HDLSGSPVA ASM+TPFVPSPGS+RV+RS+P
Sbjct: 241 ISSTRSCISSMNSEKEQPSKERKGWSITVHDLSGSPVAMASMVTPFVPSPGSNRVTRSSP 300
Query: 269 GAWLILRPNGASVSSWKPWGRLEAWRERGSEDGLGYKFALVTENGPVSGIPIAEGTLNVK 328
GAWLILRP+G +WKPWGRLEAWRE G D LGY+F L ++G + + A ++++K
Sbjct: 301 GAWLILRPDGC---TWKPWGRLEAWREAGYSDTLGYRFELF-QDGIATAVS-ASSSISLK 355
Query: 329 KGGQFCIDYKVM-------------------------------------KDHGL------ 345
GG F ID D G
Sbjct: 356 NGGSFVIDVTGGTSTTASTPTTSPQGSWDLGSGSSAGSRPASRPGSGSGSDFGYLLPQHP 415
Query: 346 SARLPGKGFVMGSTVEGEGKMSKPVVQVGAQHVTCMXXXXXXXXXXXXXXXXMDACQLFS 405
SA +GFVM +TVEG GK SKP V+VG HVTC +DAC+LFS
Sbjct: 416 SAAAQNRGFVMSATVEGVGKRSKPEVEVGVTHVTCTEDAAAHVALAAAVDLSLDACRLFS 475
Query: 406 QKLRKELYHHEE 417
KLRKEL +
Sbjct: 476 HKLRKELRQQSQ 487
>AT1G50040.1 | Symbols: | Protein of unknown function (DUF1005) |
chr1:18542236-18543823 FORWARD LENGTH=460
Length = 460
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 188/470 (40%), Positives = 236/470 (50%), Gaps = 77/470 (16%)
Query: 1 MDPCPFVRLTVESLALKLP-------VATKPAPVSGVHPSTTPCFCKIRFHVFPSQTA-- 51
MDPC FVR+ V +LA++ P ++ + S S+ C+CKI+F FP Q
Sbjct: 1 MDPCSFVRIIVGNLAVRFPRSPSSSSSSSSSSGPSVSDVSSGNCYCKIKFKSFPRQIVSV 60
Query: 52 -----XXXXXXXXXXXXXXXXXAAGFHLGPAALKR--LSGKPVALRVSVYSGSMGRTCG- 103
AA F L + ++ K L V VYS +CG
Sbjct: 61 PVLLRTESESESRCCSGNVSTVAACFSLSKSQIETSLKKAKWSVLSVEVYS-RRSASCGF 119
Query: 104 --VSGAKLLGRVTVSVDLAGAMSRPATFHGGWQRLGKKQREPEHKPSA-RLHLVVRTEPD 160
SG KL+GR V++DL A S+ H GW LG K + + S LH+ VR EPD
Sbjct: 120 VAASGEKLIGRFQVTLDLKAAESKTCLAHNGWVDLGTKSKNNKKSGSDPELHVSVRVEPD 179
Query: 161 PRFVFQFGGEPECSPVVFQIQENIRQPVFSCKF----SADRNCRSRSLPSDFTNKPSRWR 216
RFVFQF GEPECSP VFQ+Q N +Q VF+CKF S DRN
Sbjct: 180 TRFVFQFDGEPECSPQVFQVQGNAKQAVFTCKFGFRNSGDRNLSLSLS------------ 227
Query: 217 RTLKSVRDRHGRERKGWMIMIHDLSGSPVAAASMITPFVPSPGSDRVSRSNPGAWLILRP 276
++ S +++ +ERKGW I IHDLSGSPVA ASM+TPFVPSPGS+RVSRS+PGAWLILRP
Sbjct: 228 -SVTSGKEQFSKERKGWSITIHDLSGSPVAMASMVTPFVPSPGSNRVSRSSPGAWLILRP 286
Query: 277 NGASVSSWKPWGRLEAWRERGSEDGLGYKFALVTENGPVSGIPIAEGTLNVKKGGQFCID 336
+G +WKPW RL+AWRE G D LGY+F L + ++ A +++ K GG F ID
Sbjct: 287 DGY---TWKPWVRLQAWREPGVSDVLGYRFELYKDG--IAVAVSASSSISTKLGGSFIID 341
Query: 337 --------------------------YKVMKDHG--------LSARLPGKGFVMGSTVEG 362
D G LS GFVM + V+G
Sbjct: 342 GSTSTTTTASWSSSEGSFDLSSWSSIRSSRTDSGSGSDFRFSLSQAQQNLGFVMSTRVQG 401
Query: 363 EGKMSKPVVQVGAQHVTCMXXXXXXXXXXXXXXXXMDACQLFSQKLRKEL 412
K SKP V+VG +HVTC MDAC+LFSQKLR EL
Sbjct: 402 VEKQSKPKVEVGVKHVTCTEDAAAHVALAAAVDLSMDACRLFSQKLRNEL 451
>AT5G17640.1 | Symbols: | Protein of unknown function (DUF1005) |
chr5:5811047-5812429 REVERSE LENGTH=432
Length = 432
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/406 (38%), Positives = 223/406 (54%), Gaps = 35/406 (8%)
Query: 1 MDPCPFVRLTVESLALKLP--VATKPAPVSGVHPSTTPCFCKIRFHVFPSQTAXXXXXXX 58
MDP F+RL+V SLAL++P + + + ++ C C+I+ FP QT
Sbjct: 1 MDPQAFIRLSVGSLALRIPKVLINSTSKSNEKKNFSSQCSCEIKLRGFPVQTTSIPLMPS 60
Query: 59 XXXXXXXXXXAAGFHLGPAALKRLSG-----KPVA-LRVSVYSGSMGRTCGVSGAKL-LG 111
+ F+L + L+ L P A L +SV++G CGV G + +G
Sbjct: 61 LDAAPDHHSISTSFYLEESDLRALLTPGCFYSPHAHLEISVFTGKKSLNCGVGGKRQQIG 120
Query: 112 RVTVSVDLAGAMSRPATFHGGWQRLGKKQREPEHKPSARLHLVVRTEPDPRFVFQFGGEP 171
+ V +P GW +GK +R+ +A LHL V+ +PDPR+VFQF
Sbjct: 121 MFKLEVGPEWGEGKPMILFNGWISIGKTKRDG----AAELHLKVKLDPDPRYVFQFEDVT 176
Query: 172 ECSPVVFQIQENIRQPVFSCKFSADRNCRSRSLPSDFTNKPSRWRRTLKSVRDRHGRERK 231
SP + Q++ +++QP+FSCKFS DR + L +++ L+S R RERK
Sbjct: 177 TLSPQIVQLRGSVKQPIFSCKFSRDRVSQVDPLNGYWSSSGDG--TELESER----RERK 230
Query: 232 GWMIMIHDLSGSPVAAASMITPFVPSPGSDRVSRSNPGAWLILRPNGASVSSWKPWGRLE 291
GW + IHDLSGS VAAA + TPFVPS G D V++SNPGAWL++RP+ + +SW+PWG+LE
Sbjct: 231 GWKVKIHDLSGSAVAAAFITTPFVPSTGCDWVAKSNPGAWLVVRPDPSRPNSWQPWGKLE 290
Query: 292 AWRERGSEDGLGYKFALVTENGPVSGIPIAEGTLNVKKGGQFCIDY-KVMKD-------- 342
AWRERG D + +F L++ V + ++E ++ +KGG+F ID K M
Sbjct: 291 AWRERGIRDSVCCRFHLLSNGLEVGDVLMSEILISAEKGGEFLIDTDKQMLTVAATPIPS 350
Query: 343 -------HGLSARLPGKGFVMGSTVEGEGKMSKPVVQVGAQHVTCM 381
GL + G GFVM S V+GEGK SKPVVQ+ +HVTC+
Sbjct: 351 PQSSGDFSGLGQCVSGGGFVMSSRVQGEGKSSKPVVQLAMRHVTCV 396