Miyakogusa Predicted Gene
- Lj2g3v0866690.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0866690.1 Non Chatacterized Hit- tr|I1JU32|I1JU32_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,71.01,0,seg,NULL;
DS_RBD,Double-stranded RNA-binding; RNASE_3_2,Ribonuclease III domain;
PAZ,Argonaute/Dicer,CUFF.35596.1
(1310 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G43920.2 | Symbols: DCL3, ATDCL3 | dicer-like 3 | chr3:157535... 1032 0.0
AT3G43920.3 | Symbols: DCL3, ATDCL3 | dicer-like 3 | chr3:157535... 1031 0.0
AT3G43920.1 | Symbols: DCL3, ATDCL3 | dicer-like 3 | chr3:157535... 1030 0.0
AT5G20320.1 | Symbols: DCL4, ATDCL4 | dicer-like 4 | chr5:685957... 474 e-133
AT5G20320.2 | Symbols: DCL4 | dicer-like 4 | chr5:6859571-686906... 474 e-133
AT3G03300.3 | Symbols: DCL2 | dicer-like 2 | chr3:768020-774833 ... 404 e-112
AT3G03300.1 | Symbols: DCL2, ATDCL2 | dicer-like 2 | chr3:768020... 404 e-112
AT3G03300.2 | Symbols: DCL2 | dicer-like 2 | chr3:768020-774525 ... 403 e-112
AT1G01040.2 | Symbols: DCL1 | dicer-like 1 | chr1:23519-31079 FO... 328 1e-89
AT1G01040.1 | Symbols: DCL1, CAF, SUS1, SIN1, ASU1, EMB76, EMB60... 328 1e-89
AT3G20420.1 | Symbols: RTL2, ATRTL2 | RNAse THREE-like protein 2... 120 4e-27
AT5G45150.1 | Symbols: RTL3 | RNAse THREE-like protein 3 | chr5:... 114 6e-25
AT4G15417.1 | Symbols: ATRTL1, RTL1 | RNAse II-like 1 | chr4:882... 100 1e-20
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 54 6e-07
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 54 6e-07
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 54 7e-07
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 54 8e-07
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 54 8e-07
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 54 8e-07
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 53 1e-06
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 53 1e-06
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 53 1e-06
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 53 1e-06
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 53 2e-06
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 53 2e-06
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 53 2e-06
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 53 2e-06
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 53 2e-06
>AT3G43920.2 | Symbols: DCL3, ATDCL3 | dicer-like 3 |
chr3:15753548-15760830 FORWARD LENGTH=1580
Length = 1580
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1301 (44%), Positives = 786/1301 (60%), Gaps = 111/1301 (8%)
Query: 2 ILDVESDYSNAVDKGYISPKLHELIKIFHTFGESNEVLCLIFVERIIAAKVIQRFVKNVP 61
++D++ ++ +AV G++SPKL EL + +F + CLI VERII AKVI+RFVK
Sbjct: 375 LVDLQQNHLSAVISGHVSPKLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEA 434
Query: 62 QISHLTVSYLTGNHTSVDALAPTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIR 121
+++L V YLT N+ S + A Q EI D F+ GKVNLLF TDV+EEG VP+CSC++
Sbjct: 435 SLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVC 494
Query: 122 FDLPKTVRSYVQSRGRSRQANSQFILMLERGNLKQRNQHFEIIRTERFMTDAAINKVHES 181
FDLPKT+ SY QS+ ++Q+NS+ I+ LERGN KQR+ +++R E + D
Sbjct: 495 FDLPKTMCSYSQSQKHAKQSNSKSIMFLERGNPKQRDHLHDLMRREVLIQDP-----EAP 549
Query: 182 NLRAFTVGNTNAYVVDSTGASVSLHSSLSLINQYCEKLPRDKYSCVKPTFESLPMEGCYK 241
NL++ N + V G+ V S++++ +
Sbjct: 550 NLKSCPPPVKNGHGVKEIGSMVIPDSNITVSEEA-------------------------- 583
Query: 242 CKLILPPNAAFQTIVGPSGKTARLAKNLVCLEACKKLHQMGALNDHLVPFTEEPSEAHHI 301
A+ QT+ P + +L CKKL L+++L+ + + +
Sbjct: 584 --------ASTQTMSDPPSRNEQLP-------PCKKLR----LDNNLL----QSNGKEKV 620
Query: 302 VKNKESSSGAGAGTTKRKELHGTASIRALCGAWGNKPEGANFNAYKFEFTCNIVSEIYSG 361
+K SS + AG+ KRKELHGT AL G WG +GA F AYKF+F CNI E+YS
Sbjct: 621 ASSKSKSSSSAAGSKKRKELHGTTCANALSGTWGENIDGATFQAYKFDFCCNISGEVYSS 680
Query: 362 FVLLIESKLDDDVGNMELDLYLVSKIVKASVSSCGKVDLDAEQMMKAKCFHEFFFIGLFG 421
F LL+ES L +DVG +E+DLYLV K+VKASVS CG++ L E+++KAK F +FFF G+FG
Sbjct: 681 FSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFG 740
Query: 422 RFVSMSTSSPGERVFLLQEDTRSLWSPTNLYFLLPLEKLSDVCKGSLKIHWSGISSCVSA 481
+ S S +R FLLQ DT SLW P ++ LLP+E ++ S I WS I+SC S
Sbjct: 741 KLFVGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVE--TNDLASSATIDWSAINSCASI 798
Query: 482 VEFLRQKFSSVAGDCDNGSKVSSPCDTNSSN-------AESTNKIHFANCVLDLNDLREI 534
VEFL++ D D C+T+S E TN IHFAN D N L E+
Sbjct: 799 VEFLKKNSLLDLRDSDGNQ-----CNTSSGQEVLLDDKMEETNLIHFANASSDKNSLEEL 853
Query: 535 VVLAIHTGKVYCIIEAVMDLSAESPFDGNNDKSAEPITFSNYFLKRYGITLRHPGQPLLR 594
VV+AIHTG++Y I+EAV D SA SPF+ D S+ T++ YF K+YGI L HP QPL++
Sbjct: 854 VVIAIHTGRIYSIVEAVSDSSAMSPFEV--DASSGYATYAEYFNKKYGIVLAHPNQPLMK 911
Query: 595 LKQSHNSHNLLFNFHEKDVGGKSSQTGP-GASKXXXXXXXXXELLYIIDVKRDVLKSMYL 653
LKQSH++HNLL +F+E+ V + G K ELL IDV R VLKS+YL
Sbjct: 912 LKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPNIHAHLPPELLARIDVPRAVLKSIYL 971
Query: 654 LPSLMHRIETLLLSSQLREEINDXXXXXXXXXXXXXXXXTTSRCCENFSMERLELLGDSV 713
LPS+MHR+E+L+L+SQLREEI+ TT C E+FSMERLELLGDSV
Sbjct: 972 LPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTCPESFSMERLELLGDSV 1031
Query: 714 LKYVVSCHLFLKYPENHEGKLTARRQQVICNATLHKLGTNRKLQGYILDSAFEPRRWVAP 773
LKYV SCHLFLKYP+ EG+L+ +RQ +I N+ LH+L T+RKLQGYI + AFEPRRW AP
Sbjct: 1032 LKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAP 1091
Query: 774 GQHSIYPVPCDCGLETLEVPIDAKFRSEDPKVVVGKSCDRGHRWMCSKTIGDCVESLIGG 833
GQ S++PVPC CG++T EVP+D KF +E+ + +GKSCD GHRW+ SK++ DC E+LIG
Sbjct: 1092 GQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGA 1151
Query: 834 YFAGGGLIASLHFMKWLGIDAELEPSLVEKAITVASLHTYVPKSNEITSLENKLGYEFST 893
Y+ GGL ASLH MKWLGID + +P+LV +AI SL Y+PK +E+ LE K+ +EFS
Sbjct: 1152 YYVSGGLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQHEFSA 1211
Query: 894 KGLLLEAITHLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQSHTDIREGELTELRSAS 953
K LL EAITH S L YERLEFLGDSVLD LIT HL+ ++ GE+T+LRSA
Sbjct: 1212 KFLLKEAITHSS---LRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSAC 1268
Query: 954 VNNENFAQVAVRKNXXXXXXXXXXXXXNQISEYAKVVSESENNTLLLLGIKAPKALGDLV 1013
VNNENFAQVAV+ N QI++Y + + + I+ PKALGD+V
Sbjct: 1269 VNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQGPKALGDVV 1328
Query: 1014 ESIAGAILIDTKLSLDEVWKFFNPLLSPIVTPDNLELIPSRKLSRLCDSLGYFMKIKEKY 1073
ESIAGA+LIDT+L LD+VW+ F PLLSP+VTPD L+L P R+L+ LCDSLGYF ++K
Sbjct: 1329 ESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSN 1388
Query: 1074 DNKESTEHVELSVQLPNALLVQKGKGPNKRIAKEQAAFHLLNDLEKWGLSYYSGMSKGKM 1133
D ++ ++L QL + LL G ++A +AA HLL LEK +S + +
Sbjct: 1389 DGVKAQATIQL--QLDDVLLTGDGSEQTNKLALGKAASHLLTQLEKRNISRKTSLG---- 1442
Query: 1134 DNHIHIHDSSYVKNDFSISDEHSLKPAHKRIKLDETNLTAIPSTGCLPVNGSSSEASDVI 1193
DN + D +++ HS D LT+ ++E ++
Sbjct: 1443 DNQSSM--------DVNLACNHS----------DRETLTS-----------ETTEIQSIV 1473
Query: 1194 ASTPVISLTSMKKGEPRSKLNELCKKMQWPLPSFDPTEYKDRSQFGSCEALEGSKGQNCF 1253
P I +MKKG PR L+E CKK WP+P+FD +E K R+ F + E + F
Sbjct: 1474 --IPFIGPINMKKGGPRGTLHEFCKKHLWPMPTFDTSEEKSRTPFEFIDGGEKRTSFSSF 1531
Query: 1254 VSTITMIMPNEGTIECRGEARSDKKSSYDSAAVKMLHELQR 1294
STIT+ +PN + GEAR DKKSS+DSA V++L+EL+R
Sbjct: 1532 TSTITLRIPNREAVMYAGEARPDKKSSFDSAVVELLYELER 1572
>AT3G43920.3 | Symbols: DCL3, ATDCL3 | dicer-like 3 |
chr3:15753548-15760830 FORWARD LENGTH=1570
Length = 1570
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1301 (44%), Positives = 786/1301 (60%), Gaps = 111/1301 (8%)
Query: 2 ILDVESDYSNAVDKGYISPKLHELIKIFHTFGESNEVLCLIFVERIIAAKVIQRFVKNVP 61
++D++ ++ +AV G++SPKL EL + +F + CLI VERII AKVI+RFVK
Sbjct: 365 LVDLQQNHLSAVISGHVSPKLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEA 424
Query: 62 QISHLTVSYLTGNHTSVDALAPTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIR 121
+++L V YLT N+ S + A Q EI D F+ GKVNLLF TDV+EEG VP+CSC++
Sbjct: 425 SLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVC 484
Query: 122 FDLPKTVRSYVQSRGRSRQANSQFILMLERGNLKQRNQHFEIIRTERFMTDAAINKVHES 181
FDLPKT+ SY QS+ ++Q+NS+ I+ LERGN KQR+ +++R E + D
Sbjct: 485 FDLPKTMCSYSQSQKHAKQSNSKSIMFLERGNPKQRDHLHDLMRREVLIQDP-----EAP 539
Query: 182 NLRAFTVGNTNAYVVDSTGASVSLHSSLSLINQYCEKLPRDKYSCVKPTFESLPMEGCYK 241
NL++ N + V G+ V S++++ +
Sbjct: 540 NLKSCPPPVKNGHGVKEIGSMVIPDSNITVSEEA-------------------------- 573
Query: 242 CKLILPPNAAFQTIVGPSGKTARLAKNLVCLEACKKLHQMGALNDHLVPFTEEPSEAHHI 301
A+ QT+ P + +L CKKL L+++L+ + + +
Sbjct: 574 --------ASTQTMSDPPSRNEQLP-------PCKKLR----LDNNLL----QSNGKEKV 610
Query: 302 VKNKESSSGAGAGTTKRKELHGTASIRALCGAWGNKPEGANFNAYKFEFTCNIVSEIYSG 361
+K SS + AG+ KRKELHGT AL G WG +GA F AYKF+F CNI E+YS
Sbjct: 611 ASSKSKSSSSAAGSKKRKELHGTTCANALSGTWGENIDGATFQAYKFDFCCNISGEVYSS 670
Query: 362 FVLLIESKLDDDVGNMELDLYLVSKIVKASVSSCGKVDLDAEQMMKAKCFHEFFFIGLFG 421
F LL+ES L +DVG +E+DLYLV K+VKASVS CG++ L E+++KAK F +FFF G+FG
Sbjct: 671 FSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFG 730
Query: 422 RFVSMSTSSPGERVFLLQEDTRSLWSPTNLYFLLPLEKLSDVCKGSLKIHWSGISSCVSA 481
+ S S +R FLLQ DT SLW P ++ LLP+E ++ S I WS I+SC S
Sbjct: 731 KLFVGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVE--TNDLASSATIDWSAINSCASI 788
Query: 482 VEFLRQKFSSVAGDCDNGSKVSSPCDTNSSN-------AESTNKIHFANCVLDLNDLREI 534
VEFL++ D D C+T+S E TN IHFAN D N L E+
Sbjct: 789 VEFLKKNSLLDLRDSDGNQ-----CNTSSGQEVLLDDKMEETNLIHFANASSDKNSLEEL 843
Query: 535 VVLAIHTGKVYCIIEAVMDLSAESPFDGNNDKSAEPITFSNYFLKRYGITLRHPGQPLLR 594
VV+AIHTG++Y I+EAV D SA SPF+ D S+ T++ YF K+YGI L HP QPL++
Sbjct: 844 VVIAIHTGRIYSIVEAVSDSSAMSPFEV--DASSGYATYAEYFNKKYGIVLAHPNQPLMK 901
Query: 595 LKQSHNSHNLLFNFHEKDVGGKSSQTGP-GASKXXXXXXXXXELLYIIDVKRDVLKSMYL 653
LKQSH++HNLL +F+E+ V + G K ELL IDV R VLKS+YL
Sbjct: 902 LKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPNIHAHLPPELLARIDVPRAVLKSIYL 961
Query: 654 LPSLMHRIETLLLSSQLREEINDXXXXXXXXXXXXXXXXTTSRCCENFSMERLELLGDSV 713
LPS+MHR+E+L+L+SQLREEI+ TT C E+FSMERLELLGDSV
Sbjct: 962 LPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTCPESFSMERLELLGDSV 1021
Query: 714 LKYVVSCHLFLKYPENHEGKLTARRQQVICNATLHKLGTNRKLQGYILDSAFEPRRWVAP 773
LKYV SCHLFLKYP+ EG+L+ +RQ +I N+ LH+L T+RKLQGYI + AFEPRRW AP
Sbjct: 1022 LKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAP 1081
Query: 774 GQHSIYPVPCDCGLETLEVPIDAKFRSEDPKVVVGKSCDRGHRWMCSKTIGDCVESLIGG 833
GQ S++PVPC CG++T EVP+D KF +E+ + +GKSCD GHRW+ SK++ DC E+LIG
Sbjct: 1082 GQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGA 1141
Query: 834 YFAGGGLIASLHFMKWLGIDAELEPSLVEKAITVASLHTYVPKSNEITSLENKLGYEFST 893
Y+ GGL ASLH MKWLGID + +P+LV +AI SL Y+PK +E+ LE K+ +EFS
Sbjct: 1142 YYVSGGLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQHEFSA 1201
Query: 894 KGLLLEAITHLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQSHTDIREGELTELRSAS 953
K LL EAITH S L YERLEFLGDSVLD LIT HL+ ++ GE+T+LRSA
Sbjct: 1202 KFLLKEAITHSS---LRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSAC 1258
Query: 954 VNNENFAQVAVRKNXXXXXXXXXXXXXNQISEYAKVVSESENNTLLLLGIKAPKALGDLV 1013
VNNENFAQVAV+ N QI++Y + + + I+ PKALGD+V
Sbjct: 1259 VNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQGPKALGDVV 1318
Query: 1014 ESIAGAILIDTKLSLDEVWKFFNPLLSPIVTPDNLELIPSRKLSRLCDSLGYFMKIKEKY 1073
ESIAGA+LIDT+L LD+VW+ F PLLSP+VTPD L+L P R+L+ LCDSLGYF ++K
Sbjct: 1319 ESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSN 1378
Query: 1074 DNKESTEHVELSVQLPNALLVQKGKGPNKRIAKEQAAFHLLNDLEKWGLSYYSGMSKGKM 1133
D ++ ++L QL + LL G ++A +AA HLL LEK +S + +
Sbjct: 1379 DGVKAQATIQL--QLDDVLLTGDGSEQTNKLALGKAASHLLTQLEKRNISRKTSLG---- 1432
Query: 1134 DNHIHIHDSSYVKNDFSISDEHSLKPAHKRIKLDETNLTAIPSTGCLPVNGSSSEASDVI 1193
DN + D +++ HS D LT+ ++E ++
Sbjct: 1433 DNQSSM--------DVNLACNHS----------DRETLTS-----------ETTEIQSIV 1463
Query: 1194 ASTPVISLTSMKKGEPRSKLNELCKKMQWPLPSFDPTEYKDRSQFGSCEALEGSKGQNCF 1253
P I +MKKG PR L+E CKK WP+P+FD +E K R+ F + E + F
Sbjct: 1464 --IPFIGPINMKKGGPRGTLHEFCKKHLWPMPTFDTSEEKSRTPFEFIDGGEKRTSFSSF 1521
Query: 1254 VSTITMIMPNEGTIECRGEARSDKKSSYDSAAVKMLHELQR 1294
STIT+ +PN + GEAR DKKSS+DSA V++L+EL+R
Sbjct: 1522 TSTITLRIPNREAVMYAGEARPDKKSSFDSAVVELLYELER 1562
>AT3G43920.1 | Symbols: DCL3, ATDCL3 | dicer-like 3 |
chr3:15753548-15760830 FORWARD LENGTH=1531
Length = 1531
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1301 (44%), Positives = 786/1301 (60%), Gaps = 111/1301 (8%)
Query: 2 ILDVESDYSNAVDKGYISPKLHELIKIFHTFGESNEVLCLIFVERIIAAKVIQRFVKNVP 61
++D++ ++ +AV G++SPKL EL + +F + CLI VERII AKVI+RFVK
Sbjct: 326 LVDLQQNHLSAVISGHVSPKLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEA 385
Query: 62 QISHLTVSYLTGNHTSVDALAPTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIR 121
+++L V YLT N+ S + A Q EI D F+ GKVNLLF TDV+EEG VP+CSC++
Sbjct: 386 SLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVC 445
Query: 122 FDLPKTVRSYVQSRGRSRQANSQFILMLERGNLKQRNQHFEIIRTERFMTDAAINKVHES 181
FDLPKT+ SY QS+ ++Q+NS+ I+ LERGN KQR+ +++R E + D
Sbjct: 446 FDLPKTMCSYSQSQKHAKQSNSKSIMFLERGNPKQRDHLHDLMRREVLIQDP-----EAP 500
Query: 182 NLRAFTVGNTNAYVVDSTGASVSLHSSLSLINQYCEKLPRDKYSCVKPTFESLPMEGCYK 241
NL++ N + V G+ V S++++ +
Sbjct: 501 NLKSCPPPVKNGHGVKEIGSMVIPDSNITVSEEA-------------------------- 534
Query: 242 CKLILPPNAAFQTIVGPSGKTARLAKNLVCLEACKKLHQMGALNDHLVPFTEEPSEAHHI 301
A+ QT+ P + +L CKKL L+++L+ + + +
Sbjct: 535 --------ASTQTMSDPPSRNEQLP-------PCKKLR----LDNNLL----QSNGKEKV 571
Query: 302 VKNKESSSGAGAGTTKRKELHGTASIRALCGAWGNKPEGANFNAYKFEFTCNIVSEIYSG 361
+K SS + AG+ KRKELHGT AL G WG +GA F AYKF+F CNI E+YS
Sbjct: 572 ASSKSKSSSSAAGSKKRKELHGTTCANALSGTWGENIDGATFQAYKFDFCCNISGEVYSS 631
Query: 362 FVLLIESKLDDDVGNMELDLYLVSKIVKASVSSCGKVDLDAEQMMKAKCFHEFFFIGLFG 421
F LL+ES L +DVG +E+DLYLV K+VKASVS CG++ L E+++KAK F +FFF G+FG
Sbjct: 632 FSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFG 691
Query: 422 RFVSMSTSSPGERVFLLQEDTRSLWSPTNLYFLLPLEKLSDVCKGSLKIHWSGISSCVSA 481
+ S S +R FLLQ DT SLW P ++ LLP+E ++ S I WS I+SC S
Sbjct: 692 KLFVGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVE--TNDLASSATIDWSAINSCASI 749
Query: 482 VEFLRQKFSSVAGDCDNGSKVSSPCDTNSSN-------AESTNKIHFANCVLDLNDLREI 534
VEFL++ D D C+T+S E TN IHFAN D N L E+
Sbjct: 750 VEFLKKNSLLDLRDSDGNQ-----CNTSSGQEVLLDDKMEETNLIHFANASSDKNSLEEL 804
Query: 535 VVLAIHTGKVYCIIEAVMDLSAESPFDGNNDKSAEPITFSNYFLKRYGITLRHPGQPLLR 594
VV+AIHTG++Y I+EAV D SA SPF+ D S+ T++ YF K+YGI L HP QPL++
Sbjct: 805 VVIAIHTGRIYSIVEAVSDSSAMSPFEV--DASSGYATYAEYFNKKYGIVLAHPNQPLMK 862
Query: 595 LKQSHNSHNLLFNFHEKDVGGKSSQTGP-GASKXXXXXXXXXELLYIIDVKRDVLKSMYL 653
LKQSH++HNLL +F+E+ V + G K ELL IDV R VLKS+YL
Sbjct: 863 LKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPNIHAHLPPELLARIDVPRAVLKSIYL 922
Query: 654 LPSLMHRIETLLLSSQLREEINDXXXXXXXXXXXXXXXXTTSRCCENFSMERLELLGDSV 713
LPS+MHR+E+L+L+SQLREEI+ TT C E+FSMERLELLGDSV
Sbjct: 923 LPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTCPESFSMERLELLGDSV 982
Query: 714 LKYVVSCHLFLKYPENHEGKLTARRQQVICNATLHKLGTNRKLQGYILDSAFEPRRWVAP 773
LKYV SCHLFLKYP+ EG+L+ +RQ +I N+ LH+L T+RKLQGYI + AFEPRRW AP
Sbjct: 983 LKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAP 1042
Query: 774 GQHSIYPVPCDCGLETLEVPIDAKFRSEDPKVVVGKSCDRGHRWMCSKTIGDCVESLIGG 833
GQ S++PVPC CG++T EVP+D KF +E+ + +GKSCD GHRW+ SK++ DC E+LIG
Sbjct: 1043 GQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGA 1102
Query: 834 YFAGGGLIASLHFMKWLGIDAELEPSLVEKAITVASLHTYVPKSNEITSLENKLGYEFST 893
Y+ GGL ASLH MKWLGID + +P+LV +AI SL Y+PK +E+ LE K+ +EFS
Sbjct: 1103 YYVSGGLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQHEFSA 1162
Query: 894 KGLLLEAITHLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQSHTDIREGELTELRSAS 953
K LL EAITH S L YERLEFLGDSVLD LIT HL+ ++ GE+T+LRSA
Sbjct: 1163 KFLLKEAITHSS---LRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSAC 1219
Query: 954 VNNENFAQVAVRKNXXXXXXXXXXXXXNQISEYAKVVSESENNTLLLLGIKAPKALGDLV 1013
VNNENFAQVAV+ N QI++Y + + + I+ PKALGD+V
Sbjct: 1220 VNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQGPKALGDVV 1279
Query: 1014 ESIAGAILIDTKLSLDEVWKFFNPLLSPIVTPDNLELIPSRKLSRLCDSLGYFMKIKEKY 1073
ESIAGA+LIDT+L LD+VW+ F PLLSP+VTPD L+L P R+L+ LCDSLGYF ++K
Sbjct: 1280 ESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSN 1339
Query: 1074 DNKESTEHVELSVQLPNALLVQKGKGPNKRIAKEQAAFHLLNDLEKWGLSYYSGMSKGKM 1133
D ++ ++L QL + LL G ++A +AA HLL LEK +S + +
Sbjct: 1340 DGVKAQATIQL--QLDDVLLTGDGSEQTNKLALGKAASHLLTQLEKRNISRKTSLG---- 1393
Query: 1134 DNHIHIHDSSYVKNDFSISDEHSLKPAHKRIKLDETNLTAIPSTGCLPVNGSSSEASDVI 1193
DN + D +++ HS D LT+ ++E ++
Sbjct: 1394 DNQSSM--------DVNLACNHS----------DRETLTS-----------ETTEIQSIV 1424
Query: 1194 ASTPVISLTSMKKGEPRSKLNELCKKMQWPLPSFDPTEYKDRSQFGSCEALEGSKGQNCF 1253
P I +MKKG PR L+E CKK WP+P+FD +E K R+ F + E + F
Sbjct: 1425 --IPFIGPINMKKGGPRGTLHEFCKKHLWPMPTFDTSEEKSRTPFEFIDGGEKRTSFSSF 1482
Query: 1254 VSTITMIMPNEGTIECRGEARSDKKSSYDSAAVKMLHELQR 1294
STIT+ +PN + GEAR DKKSS+DSA V++L+EL+R
Sbjct: 1483 TSTITLRIPNREAVMYAGEARPDKKSSFDSAVVELLYELER 1523
>AT5G20320.1 | Symbols: DCL4, ATDCL4 | dicer-like 4 |
chr5:6859571-6869068 REVERSE LENGTH=1702
Length = 1702
Score = 474 bits (1221), Expect = e-133, Method: Compositional matrix adjust.
Identities = 372/1293 (28%), Positives = 603/1293 (46%), Gaps = 100/1293 (7%)
Query: 12 AVDKGYISPKLHELIKIFHTFGESNEVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYL 71
A+ + S KL +LIKI F + C+IFV RI+ A+ + + N+ + +L
Sbjct: 463 ALKEPLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFL 522
Query: 72 TGNHTSVDALAPTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSY 131
G + + +++ + IL F+S ++NLL T V EEG+++ C VIR+DLP+TV S+
Sbjct: 523 VGLSSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSF 582
Query: 132 VQSRGRSRQANSQFILMLERGNLKQRN--QHFEIIRTERFMTDAAINKVHESNLRAFTVG 189
+QSRGR+R S++ +++ GN K+ + ++F+ + +R + E+ R
Sbjct: 583 IQSRGRARMPQSEYAFLVDSGNEKEMDLIENFK-VNEDRMNLEITYRSSEETCPRL---- 637
Query: 190 NTNAYVVDSTGASVSLHSSLSLINQYCEKLPRDKYSCVKPTFESLPME--GCYKCKLILP 247
+ Y V TGA +S SS+SL+ +YC +LP D++ KP F+ P++ G C++ LP
Sbjct: 638 DEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLP 697
Query: 248 PNAAFQTIVGPSGKTARLAKNLVCLEACKKLHQMGALNDHLVPFTEEPSEAHHIVKNKES 307
NA I + AK CL+A +LH +G LND L+P +++ E +
Sbjct: 698 ANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDF 757
Query: 308 SSGAGAGTTKRKELHGTASIRALCGAWGNKPEGANFNAYKFEFTCNIVSEIYSGFVLLIE 367
+ G G + R +L+ W N ++Y F + IY F ++
Sbjct: 758 DNIKGEGCS-RGDLYEMRVPVLFKQKWDPSTSCVNLHSYYIMFVPHPADRIYKKFGFFMK 816
Query: 368 SKLDDDVGNMELDLYLV-SKIVKASVSSCGKVDLDAEQMMKAKCFHEFFFIGLFGRFVSM 426
S L + M++DL+L + V + G + D +++ A+ F E LF R +
Sbjct: 817 SPLPVEAETMDIDLHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVLFERGELI 876
Query: 427 STSSPGERVFLLQEDTRSLWSPTNLYFLLPLEKLSDVCKGSLKIHWSGISSCVSAVEFLR 486
P E LQ+ +R+ S + Y LLPL L D + + + W I +C+S+ F
Sbjct: 877 PDFVPLE----LQDSSRT--SKSTFYLLLPL-CLHD-GESVISVDWVTIRNCLSSPIF-- 926
Query: 487 QKFSSVAGDCDNGSKVSSPCDTNSSNAESTNKIHFANCVLDLNDLREIVVLAIHTGKVYC 546
K SV + + P S + + AN +++D++ +V ++ + Y
Sbjct: 927 -KTPSVLVE-----DIFPP---------SGSHLKLANGCWNIDDVKNSLVFTTYSKQFYF 971
Query: 547 IIEAVMDLSAESPFDGNNDKSAEPITFSNYFLKRYGITLRHPGQPLLRLKQSHNSHNLLF 606
+ + + SP ++ KS + K YG+ L+HP QPLLR+K + NLL
Sbjct: 972 VADICHGRNGFSPVKESSTKSHVESIY-----KLYGVELKHPAQPLLRVKPLCHVRNLLH 1026
Query: 607 NFHEKDVGGKSSQTGPGASKXXXXXXXXXELLYIIDVKRDVLKSMYLLPSLMHRIETLLL 666
N + ++ + + L I + +D+ S+ LLPS+MHR+E LL+
Sbjct: 1027 NRMQTNLEPQE------LDEYFIEIPPELSHLKIKGLSKDIGSSLSLLPSIMHRMENLLV 1080
Query: 667 SSQLREEIN-DXXXXXXXXXXXXXXXXTTSRCCENFSMERLELLGDSVLKYVVSCHLFLK 725
+ +L+ ++ TT +C E S+ERLE+LGD+ LK+ VS HLFL
Sbjct: 1081 AIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFLH 1140
Query: 726 YPENHEGKLTARRQQVICNATLHKLGTNRKLQGYILDSAFEPRRWVAPGQHSIYPVPCDC 785
+ EG+LT RR V+ N+ L +L + LQ YI D A +P ++ A G PC
Sbjct: 1141 HDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRDQALDPTQFFAFGH------PCRV 1194
Query: 786 GLETLEVPIDAKFRSEDPKVVVGKS----CDRGHRWMCSKTIGDCVESLIGGYFAGGGLI 841
+ + + + D ++ + C +GH W+ KTI D VE+L+G + G
Sbjct: 1195 TCDEV-ASKEVHSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFLVDSGFK 1253
Query: 842 ASLHFMKWLGIDAELEPSLVEKAITVASLHTYVPKSNEITSLENKLGYEFSTKGLLLEAI 901
++ F+KW+G++ + E V+ A + + + N + +LEN+L Y+F KGLL++A
Sbjct: 1254 GAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTRNNLETLENQLDYKFLHKGLLVQAF 1313
Query: 902 THLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQSHTDIREGELTELRSASVNNENFAQ 961
H S G G CY+RLEFLGD+VLD L+T + + ++ G+LT+LRS SVNNE A
Sbjct: 1314 IHPSYNRHGGG-CYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALAN 1372
Query: 962 VAVRKNXXXXXXXXXXXXXNQISEYAKVVSESENNTLLLLGIKAPKALGDLVESIAGAIL 1021
VAV + I +Y ++ S + G + PK LGDLVES GA+
Sbjct: 1373 VAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGPRCPKVLGDLVESCLGALF 1432
Query: 1022 IDTKLSLDEVWKFFNPLLSPIVTPDNLELIPSRKLSRLCDSLGYFMKIKEKYDNKESTEH 1081
+D +L+ VW L P+ NL++ P ++L LC S + +I K+
Sbjct: 1433 LDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDREISAT--KKDGAFT 1490
Query: 1082 VELSVQLPNALLVQKGKGPNKRIAKEQAAFHLLNDLEKWGLSYYSGMSKGKMDNHIHIHD 1141
VEL V L G NKR ++AA ++ +L+ S + + N I
Sbjct: 1491 VELKVTKNGCCLTVSATGRNKREGTKKAAQLMITNLKAHENITTSHPLEDVLKNGIRNEA 1550
Query: 1142 S--SYVKNDFSISDEHSLKPAHKRIKLDETNLTAIPSTGCLPVNGSS-----------SE 1188
Y ++ + D + LD NL + + G SS S+
Sbjct: 1551 KLIGYNEDPIDVVD---------LVGLDVENLNILETFGGNSERSSSYVIRRGLPQAPSK 1601
Query: 1189 ASDVIASTPVISLTSMKKGEPRSKLNELCKKMQWPLPSFDPTEYKDRSQFGSCEALEGSK 1248
D + +I +S L+E C W P F+ CE EG
Sbjct: 1602 TEDRLPQKAIIKAGGPSSKTAKSLLHETCVANCWKPPHFE-----------CCEE-EGPG 1649
Query: 1249 GQNCFVSTITMIM---PNEGTIECRGEARSDKK 1278
FV + + + PN T+EC GEAR+ KK
Sbjct: 1650 HLKSFVYKVILEVEDAPN-MTLECYGEARATKK 1681
>AT5G20320.2 | Symbols: DCL4 | dicer-like 4 | chr5:6859571-6869068
REVERSE LENGTH=1688
Length = 1688
Score = 474 bits (1220), Expect = e-133, Method: Compositional matrix adjust.
Identities = 372/1293 (28%), Positives = 603/1293 (46%), Gaps = 100/1293 (7%)
Query: 12 AVDKGYISPKLHELIKIFHTFGESNEVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYL 71
A+ + S KL +LIKI F + C+IFV RI+ A+ + + N+ + +L
Sbjct: 449 ALKEPLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFL 508
Query: 72 TGNHTSVDALAPTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSY 131
G + + +++ + IL F+S ++NLL T V EEG+++ C VIR+DLP+TV S+
Sbjct: 509 VGLSSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSF 568
Query: 132 VQSRGRSRQANSQFILMLERGNLKQRN--QHFEIIRTERFMTDAAINKVHESNLRAFTVG 189
+QSRGR+R S++ +++ GN K+ + ++F+ + +R + E+ R
Sbjct: 569 IQSRGRARMPQSEYAFLVDSGNEKEMDLIENFK-VNEDRMNLEITYRSSEETCPRL---- 623
Query: 190 NTNAYVVDSTGASVSLHSSLSLINQYCEKLPRDKYSCVKPTFESLPME--GCYKCKLILP 247
+ Y V TGA +S SS+SL+ +YC +LP D++ KP F+ P++ G C++ LP
Sbjct: 624 DEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLP 683
Query: 248 PNAAFQTIVGPSGKTARLAKNLVCLEACKKLHQMGALNDHLVPFTEEPSEAHHIVKNKES 307
NA I + AK CL+A +LH +G LND L+P +++ E +
Sbjct: 684 ANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDF 743
Query: 308 SSGAGAGTTKRKELHGTASIRALCGAWGNKPEGANFNAYKFEFTCNIVSEIYSGFVLLIE 367
+ G G + R +L+ W N ++Y F + IY F ++
Sbjct: 744 DNIKGEGCS-RGDLYEMRVPVLFKQKWDPSTSCVNLHSYYIMFVPHPADRIYKKFGFFMK 802
Query: 368 SKLDDDVGNMELDLYLV-SKIVKASVSSCGKVDLDAEQMMKAKCFHEFFFIGLFGRFVSM 426
S L + M++DL+L + V + G + D +++ A+ F E LF R +
Sbjct: 803 SPLPVEAETMDIDLHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVLFERGELI 862
Query: 427 STSSPGERVFLLQEDTRSLWSPTNLYFLLPLEKLSDVCKGSLKIHWSGISSCVSAVEFLR 486
P E LQ+ +R+ S + Y LLPL L D + + + W I +C+S+ F
Sbjct: 863 PDFVPLE----LQDSSRT--SKSTFYLLLPL-CLHD-GESVISVDWVTIRNCLSSPIF-- 912
Query: 487 QKFSSVAGDCDNGSKVSSPCDTNSSNAESTNKIHFANCVLDLNDLREIVVLAIHTGKVYC 546
K SV + + P S + + AN +++D++ +V ++ + Y
Sbjct: 913 -KTPSVLVE-----DIFPP---------SGSHLKLANGCWNIDDVKNSLVFTTYSKQFYF 957
Query: 547 IIEAVMDLSAESPFDGNNDKSAEPITFSNYFLKRYGITLRHPGQPLLRLKQSHNSHNLLF 606
+ + + SP ++ KS + K YG+ L+HP QPLLR+K + NLL
Sbjct: 958 VADICHGRNGFSPVKESSTKSHVESIY-----KLYGVELKHPAQPLLRVKPLCHVRNLLH 1012
Query: 607 NFHEKDVGGKSSQTGPGASKXXXXXXXXXELLYIIDVKRDVLKSMYLLPSLMHRIETLLL 666
N + ++ + + L I + +D+ S+ LLPS+MHR+E LL+
Sbjct: 1013 NRMQTNLEPQE------LDEYFIEIPPELSHLKIKGLSKDIGSSLSLLPSIMHRMENLLV 1066
Query: 667 SSQLREEIN-DXXXXXXXXXXXXXXXXTTSRCCENFSMERLELLGDSVLKYVVSCHLFLK 725
+ +L+ ++ TT +C E S+ERLE+LGD+ LK+ VS HLFL
Sbjct: 1067 AIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFLH 1126
Query: 726 YPENHEGKLTARRQQVICNATLHKLGTNRKLQGYILDSAFEPRRWVAPGQHSIYPVPCDC 785
+ EG+LT RR V+ N+ L +L + LQ YI D A +P ++ A G PC
Sbjct: 1127 HDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRDQALDPTQFFAFGH------PCRV 1180
Query: 786 GLETLEVPIDAKFRSEDPKVVVGKS----CDRGHRWMCSKTIGDCVESLIGGYFAGGGLI 841
+ + + + D ++ + C +GH W+ KTI D VE+L+G + G
Sbjct: 1181 TCDEV-ASKEVHSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFLVDSGFK 1239
Query: 842 ASLHFMKWLGIDAELEPSLVEKAITVASLHTYVPKSNEITSLENKLGYEFSTKGLLLEAI 901
++ F+KW+G++ + E V+ A + + + N + +LEN+L Y+F KGLL++A
Sbjct: 1240 GAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTRNNLETLENQLDYKFLHKGLLVQAF 1299
Query: 902 THLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQSHTDIREGELTELRSASVNNENFAQ 961
H S G G CY+RLEFLGD+VLD L+T + + ++ G+LT+LRS SVNNE A
Sbjct: 1300 IHPSYNRHGGG-CYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALAN 1358
Query: 962 VAVRKNXXXXXXXXXXXXXNQISEYAKVVSESENNTLLLLGIKAPKALGDLVESIAGAIL 1021
VAV + I +Y ++ S + G + PK LGDLVES GA+
Sbjct: 1359 VAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGPRCPKVLGDLVESCLGALF 1418
Query: 1022 IDTKLSLDEVWKFFNPLLSPIVTPDNLELIPSRKLSRLCDSLGYFMKIKEKYDNKESTEH 1081
+D +L+ VW L P+ NL++ P ++L LC S + +I K+
Sbjct: 1419 LDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDREISAT--KKDGAFT 1476
Query: 1082 VELSVQLPNALLVQKGKGPNKRIAKEQAAFHLLNDLEKWGLSYYSGMSKGKMDNHIHIHD 1141
VEL V L G NKR ++AA ++ +L+ S + + N I
Sbjct: 1477 VELKVTKNGCCLTVSATGRNKREGTKKAAQLMITNLKAHENITTSHPLEDVLKNGIRNEA 1536
Query: 1142 S--SYVKNDFSISDEHSLKPAHKRIKLDETNLTAIPSTGCLPVNGSS-----------SE 1188
Y ++ + D + LD NL + + G SS S+
Sbjct: 1537 KLIGYNEDPIDVVD---------LVGLDVENLNILETFGGNSERSSSYVIRRGLPQAPSK 1587
Query: 1189 ASDVIASTPVISLTSMKKGEPRSKLNELCKKMQWPLPSFDPTEYKDRSQFGSCEALEGSK 1248
D + +I +S L+E C W P F+ CE EG
Sbjct: 1588 TEDRLPQKAIIKAGGPSSKTAKSLLHETCVANCWKPPHFE-----------CCEE-EGPG 1635
Query: 1249 GQNCFVSTITMIM---PNEGTIECRGEARSDKK 1278
FV + + + PN T+EC GEAR+ KK
Sbjct: 1636 HLKSFVYKVILEVEDAPN-MTLECYGEARATKK 1667
>AT3G03300.3 | Symbols: DCL2 | dicer-like 2 | chr3:768020-774833
REVERSE LENGTH=1388
Length = 1388
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 329/1121 (29%), Positives = 529/1121 (47%), Gaps = 117/1121 (10%)
Query: 14 DKGYISPKLHELIKIFHTFGESNEVLCLIFVERIIAAKVIQRFVKNV-PQISHLTVSYLT 72
+ G ++ K LI+ + + C+IFV+R+I A V++ + + P ++ Y+
Sbjct: 364 EAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVA 423
Query: 73 GNHTSVDALAPTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYV 132
GN++ + +Q EI++ FR G VN++ T +LEEG++V +C+ VIRFD + S++
Sbjct: 424 GNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFI 483
Query: 133 QSRGRSRQANSQFILMLERGNLKQRNQHFEIIRTERFMTDAAINKVHESNLRAFTVGNTN 192
QSRGR+R NS +++M+E G+L +++ + + + M + +++ +
Sbjct: 484 QSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSDEP 543
Query: 193 AYVVDSTGASVSLHSSLSLINQYCEKLPRDKYSCVKPTFESLPMEGCYKCKLILPPNAAF 252
+ V+STGA+V+L SS+SLI YC +LP D+Y P F+ +G C L LP +
Sbjct: 544 LFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQG--SCTLYLPKSCPV 601
Query: 253 QTIVGPSGKTARLAKNLVCLEACKKLHQMGALNDHLVPFTEEPSEAHHIVKNKESSSGAG 312
+ + + ++ K VCL+AC +LH++GAL+DHLVP +V S
Sbjct: 602 KEVKAEANN--KVLKQAVCLKACIQLHKVGALSDHLVP--------DMVVAETVSQKLEK 651
Query: 313 AGTTKRKELHGTASIRALCGAWGNKPEGANFNAYKFEFTCNIVSEIYSGFVLL-IESKLD 371
+ + L + +PE ++ Y N + VLL L+
Sbjct: 652 IQYNTEQPCYFPPE---LVSQFSAQPE-TTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLE 707
Query: 372 DDVGNMELDLYLVSKIVKASVSSCGKVDLDAEQMMKAKCFHEFFFIGLFGRFVSMSTSSP 431
DD+GN L + ++S G L E+++ F F I LF + S +
Sbjct: 708 DDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVL----FCRRFQITLFRVLLDHSVENL 763
Query: 432 GERVFLLQ-EDTRSLWSPTNLYFLLPLEKLSDVCKGSLKIHWSGISSC-VSAVEFLRQKF 489
E + L D +L Y L+P S + I W I S +++ E L +
Sbjct: 764 MEALNGLHLRDGVAL-----DYLLVP----STHSHETSLIDWEVIRSVNLTSHEVLEKH- 813
Query: 490 SSVAGDCDNGSKVSSPCDTN-SSNAESTNKIHFANCVLDLNDLREIVVLAIHTGKVYCII 548
C TN +S T F CV+ + +V H G VYC
Sbjct: 814 --------------ENCSTNGASRILHTKDGLFCTCVV-----QNALVYTPHNGYVYCTK 854
Query: 549 EAVMDLSAESPFDGNNDKSAEPITFSNYFLKRYGITLRHPGQPLLRLKQSHNSHNLLF-- 606
+ +L+ S N T+ Y+ +R+GI L +PLL + H+ L
Sbjct: 855 GVLNNLNGNSLLTKRNSGDQ---TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMA 911
Query: 607 -NFHEKDVGGKSSQTGPGASKXXXXXXXXXELLYII--DVKRDVLKSMYLLPSLMHRIET 663
EK+ + + P EL ++I + D++ S +PS+M RIE+
Sbjct: 912 KKKKEKEHDREFVELPP-------------ELCHVILSPISVDMIYSYTFIPSVMQRIES 958
Query: 664 LLLSSQLREEINDXXXXXXXXXXXXXXXXTTSRCCENFSMERLELLGDSVLKYVVSCHLF 723
LL++ L++ I TT +C + F +E LE LGDS LKY V LF
Sbjct: 959 LLIAYNLKKSI----PKVNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLF 1014
Query: 724 LKYPENHEGKLTARRQQVICNATLHKLGTNRKLQGYILDSAFEPRRWVAPGQHS-IYPVP 782
+HEG L+ ++ +I N L + G +KLQG+I D FEP+ W+ PGQ S Y +
Sbjct: 1015 QHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLV 1074
Query: 783 CDCGLETLEVPIDAKFRSEDPKVVVGKSCDRGHRWMCSKTIGDCVESLIGGYFAGGGLIA 842
D E+ + + ++ R + K++ D VESLIG Y + GG +A
Sbjct: 1075 NDTLPESRNIYVASR------------------RNLKRKSVADVVESLIGAYLSEGGELA 1116
Query: 843 SLHFMKWLGIDAELEPSLVEKAITVASLHTYVPKSNEITSLENKLGYEFSTKGLLLEAIT 902
+L FM W+GI + + +++ + + K + +E+ L Y F K LL+EA+T
Sbjct: 1117 ALMFMNWVGIKVDFTTTKIQRDSPIQA-----EKLVNVGYMESLLNYSFEDKSLLVEALT 1171
Query: 903 HLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQSHTDIREGELTELRSASVNNENFAQV 962
H S CY+RLEFLGDSVLD LIT HLY + + G LT++RSASVNNE +A V
Sbjct: 1172 HGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALV 1231
Query: 963 AVRKNXXXXXXXXXXXXXNQISEYAKVVSESENNTLL-LLG----IKAPKALGDLVESIA 1017
AV+ N IS + VSE E ++L G I PK LGD++ES+A
Sbjct: 1232 AVKANLHKHILYASHHLHKHIS---RTVSEFEQSSLQSTFGWESDISFPKVLGDVIESLA 1288
Query: 1018 GAILIDTKLSLDEVWKFFNPLLSPIVTPDNLELIPSRKLSRLCDSLGYFMKIKEKYDNKE 1077
GAI +D+ + + V+ PLL ++TP+ ++L P R+L+ LC + + + +D+
Sbjct: 1289 GAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQKWQFELSKAKDFDS-- 1346
Query: 1078 STEHVELSVQLPNALLVQKGKGPNKRIAKEQAAFHLLNDLE 1118
+ V+ K +K++AK+ A +LN L+
Sbjct: 1347 ----FTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLK 1383
>AT3G03300.1 | Symbols: DCL2, ATDCL2 | dicer-like 2 |
chr3:768020-774833 REVERSE LENGTH=1388
Length = 1388
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 329/1121 (29%), Positives = 529/1121 (47%), Gaps = 117/1121 (10%)
Query: 14 DKGYISPKLHELIKIFHTFGESNEVLCLIFVERIIAAKVIQRFVKNV-PQISHLTVSYLT 72
+ G ++ K LI+ + + C+IFV+R+I A V++ + + P ++ Y+
Sbjct: 364 EAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVA 423
Query: 73 GNHTSVDALAPTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYV 132
GN++ + +Q EI++ FR G VN++ T +LEEG++V +C+ VIRFD + S++
Sbjct: 424 GNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFI 483
Query: 133 QSRGRSRQANSQFILMLERGNLKQRNQHFEIIRTERFMTDAAINKVHESNLRAFTVGNTN 192
QSRGR+R NS +++M+E G+L +++ + + + M + +++ +
Sbjct: 484 QSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSDEP 543
Query: 193 AYVVDSTGASVSLHSSLSLINQYCEKLPRDKYSCVKPTFESLPMEGCYKCKLILPPNAAF 252
+ V+STGA+V+L SS+SLI YC +LP D+Y P F+ +G C L LP +
Sbjct: 544 LFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQG--SCTLYLPKSCPV 601
Query: 253 QTIVGPSGKTARLAKNLVCLEACKKLHQMGALNDHLVPFTEEPSEAHHIVKNKESSSGAG 312
+ + + ++ K VCL+AC +LH++GAL+DHLVP +V S
Sbjct: 602 KEVKAEANN--KVLKQAVCLKACIQLHKVGALSDHLVP--------DMVVAETVSQKLEK 651
Query: 313 AGTTKRKELHGTASIRALCGAWGNKPEGANFNAYKFEFTCNIVSEIYSGFVLL-IESKLD 371
+ + L + +PE ++ Y N + VLL L+
Sbjct: 652 IQYNTEQPCYFPPE---LVSQFSAQPE-TTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLE 707
Query: 372 DDVGNMELDLYLVSKIVKASVSSCGKVDLDAEQMMKAKCFHEFFFIGLFGRFVSMSTSSP 431
DD+GN L + ++S G L E+++ F F I LF + S +
Sbjct: 708 DDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVL----FCRRFQITLFRVLLDHSVENL 763
Query: 432 GERVFLLQ-EDTRSLWSPTNLYFLLPLEKLSDVCKGSLKIHWSGISSC-VSAVEFLRQKF 489
E + L D +L Y L+P S + I W I S +++ E L +
Sbjct: 764 MEALNGLHLRDGVAL-----DYLLVP----STHSHETSLIDWEVIRSVNLTSHEVLEKH- 813
Query: 490 SSVAGDCDNGSKVSSPCDTN-SSNAESTNKIHFANCVLDLNDLREIVVLAIHTGKVYCII 548
C TN +S T F CV+ + +V H G VYC
Sbjct: 814 --------------ENCSTNGASRILHTKDGLFCTCVV-----QNALVYTPHNGYVYCTK 854
Query: 549 EAVMDLSAESPFDGNNDKSAEPITFSNYFLKRYGITLRHPGQPLLRLKQSHNSHNLLF-- 606
+ +L+ S N T+ Y+ +R+GI L +PLL + H+ L
Sbjct: 855 GVLNNLNGNSLLTKRNSGDQ---TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMA 911
Query: 607 -NFHEKDVGGKSSQTGPGASKXXXXXXXXXELLYII--DVKRDVLKSMYLLPSLMHRIET 663
EK+ + + P EL ++I + D++ S +PS+M RIE+
Sbjct: 912 KKKKEKEHDREFVELPP-------------ELCHVILSPISVDMIYSYTFIPSVMQRIES 958
Query: 664 LLLSSQLREEINDXXXXXXXXXXXXXXXXTTSRCCENFSMERLELLGDSVLKYVVSCHLF 723
LL++ L++ I TT +C + F +E LE LGDS LKY V LF
Sbjct: 959 LLIAYNLKKSI----PKVNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLF 1014
Query: 724 LKYPENHEGKLTARRQQVICNATLHKLGTNRKLQGYILDSAFEPRRWVAPGQHS-IYPVP 782
+HEG L+ ++ +I N L + G +KLQG+I D FEP+ W+ PGQ S Y +
Sbjct: 1015 QHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLV 1074
Query: 783 CDCGLETLEVPIDAKFRSEDPKVVVGKSCDRGHRWMCSKTIGDCVESLIGGYFAGGGLIA 842
D E+ + + ++ R + K++ D VESLIG Y + GG +A
Sbjct: 1075 NDTLPESRNIYVASR------------------RNLKRKSVADVVESLIGAYLSEGGELA 1116
Query: 843 SLHFMKWLGIDAELEPSLVEKAITVASLHTYVPKSNEITSLENKLGYEFSTKGLLLEAIT 902
+L FM W+GI + + +++ + + K + +E+ L Y F K LL+EA+T
Sbjct: 1117 ALMFMNWVGIKVDFTTTKIQRDSPIQA-----EKLVNVGYMESLLNYSFEDKSLLVEALT 1171
Query: 903 HLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQSHTDIREGELTELRSASVNNENFAQV 962
H S CY+RLEFLGDSVLD LIT HLY + + G LT++RSASVNNE +A V
Sbjct: 1172 HGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALV 1231
Query: 963 AVRKNXXXXXXXXXXXXXNQISEYAKVVSESENNTLL-LLG----IKAPKALGDLVESIA 1017
AV+ N IS + VSE E ++L G I PK LGD++ES+A
Sbjct: 1232 AVKANLHKHILYASHHLHKHIS---RTVSEFEQSSLQSTFGWESDISFPKVLGDVIESLA 1288
Query: 1018 GAILIDTKLSLDEVWKFFNPLLSPIVTPDNLELIPSRKLSRLCDSLGYFMKIKEKYDNKE 1077
GAI +D+ + + V+ PLL ++TP+ ++L P R+L+ LC + + + +D+
Sbjct: 1289 GAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQKWQFELSKAKDFDS-- 1346
Query: 1078 STEHVELSVQLPNALLVQKGKGPNKRIAKEQAAFHLLNDLE 1118
+ V+ K +K++AK+ A +LN L+
Sbjct: 1347 ----FTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLK 1383
>AT3G03300.2 | Symbols: DCL2 | dicer-like 2 | chr3:768020-774525
REVERSE LENGTH=1374
Length = 1374
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 329/1121 (29%), Positives = 529/1121 (47%), Gaps = 117/1121 (10%)
Query: 14 DKGYISPKLHELIKIFHTFGESNEVLCLIFVERIIAAKVIQRFVKNV-PQISHLTVSYLT 72
+ G ++ K LI+ + + C+IFV+R+I A V++ + + P ++ Y+
Sbjct: 350 EAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVA 409
Query: 73 GNHTSVDALAPTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYV 132
GN++ + +Q EI++ FR G VN++ T +LEEG++V +C+ VIRFD + S++
Sbjct: 410 GNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFI 469
Query: 133 QSRGRSRQANSQFILMLERGNLKQRNQHFEIIRTERFMTDAAINKVHESNLRAFTVGNTN 192
QSRGR+R NS +++M+E G+L +++ + + + M + +++ +
Sbjct: 470 QSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSDEP 529
Query: 193 AYVVDSTGASVSLHSSLSLINQYCEKLPRDKYSCVKPTFESLPMEGCYKCKLILPPNAAF 252
+ V+STGA+V+L SS+SLI YC +LP D+Y P F+ +G C L LP +
Sbjct: 530 LFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQG--SCTLYLPKSCPV 587
Query: 253 QTIVGPSGKTARLAKNLVCLEACKKLHQMGALNDHLVPFTEEPSEAHHIVKNKESSSGAG 312
+ + + ++ K VCL+AC +LH++GAL+DHLVP +V S
Sbjct: 588 KEVKAEANN--KVLKQAVCLKACIQLHKVGALSDHLVP--------DMVVAETVSQKLEK 637
Query: 313 AGTTKRKELHGTASIRALCGAWGNKPEGANFNAYKFEFTCNIVSEIYSGFVLL-IESKLD 371
+ + L + +PE ++ Y N + VLL L+
Sbjct: 638 IQYNTEQPCYFPPE---LVSQFSAQPE-TTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLE 693
Query: 372 DDVGNMELDLYLVSKIVKASVSSCGKVDLDAEQMMKAKCFHEFFFIGLFGRFVSMSTSSP 431
DD+GN L + ++S G L E+++ F F I LF + S +
Sbjct: 694 DDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVL----FCRRFQITLFRVLLDHSVENL 749
Query: 432 GERVFLLQ-EDTRSLWSPTNLYFLLPLEKLSDVCKGSLKIHWSGISSC-VSAVEFLRQKF 489
E + L D +L Y L+P S + I W I S +++ E L +
Sbjct: 750 MEALNGLHLRDGVAL-----DYLLVP----STHSHETSLIDWEVIRSVNLTSHEVLEKH- 799
Query: 490 SSVAGDCDNGSKVSSPCDTN-SSNAESTNKIHFANCVLDLNDLREIVVLAIHTGKVYCII 548
C TN +S T F CV+ + +V H G VYC
Sbjct: 800 --------------ENCSTNGASRILHTKDGLFCTCVV-----QNALVYTPHNGYVYCTK 840
Query: 549 EAVMDLSAESPFDGNNDKSAEPITFSNYFLKRYGITLRHPGQPLLRLKQSHNSHNLLF-- 606
+ +L+ S N T+ Y+ +R+GI L +PLL + H+ L
Sbjct: 841 GVLNNLNGNSLLTKRNSGDQ---TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMA 897
Query: 607 -NFHEKDVGGKSSQTGPGASKXXXXXXXXXELLYII--DVKRDVLKSMYLLPSLMHRIET 663
EK+ + + P EL ++I + D++ S +PS+M RIE+
Sbjct: 898 KKKKEKEHDREFVELPP-------------ELCHVILSPISVDMIYSYTFIPSVMQRIES 944
Query: 664 LLLSSQLREEINDXXXXXXXXXXXXXXXXTTSRCCENFSMERLELLGDSVLKYVVSCHLF 723
LL++ L++ I TT +C + F +E LE LGDS LKY V LF
Sbjct: 945 LLIAYNLKKSI----PKVNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLF 1000
Query: 724 LKYPENHEGKLTARRQQVICNATLHKLGTNRKLQGYILDSAFEPRRWVAPGQHS-IYPVP 782
+HEG L+ ++ +I N L + G +KLQG+I D FEP+ W+ PGQ S Y +
Sbjct: 1001 QHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLV 1060
Query: 783 CDCGLETLEVPIDAKFRSEDPKVVVGKSCDRGHRWMCSKTIGDCVESLIGGYFAGGGLIA 842
D E+ + + ++ R + K++ D VESLIG Y + GG +A
Sbjct: 1061 NDTLPESRNIYVASR------------------RNLKRKSVADVVESLIGAYLSEGGELA 1102
Query: 843 SLHFMKWLGIDAELEPSLVEKAITVASLHTYVPKSNEITSLENKLGYEFSTKGLLLEAIT 902
+L FM W+GI + + +++ + + K + +E+ L Y F K LL+EA+T
Sbjct: 1103 ALMFMNWVGIKVDFTTTKIQRDSPIQA-----EKLVNVGYMESLLNYSFEDKSLLVEALT 1157
Query: 903 HLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQSHTDIREGELTELRSASVNNENFAQV 962
H S CY+RLEFLGDSVLD LIT HLY + + G LT++RSASVNNE +A V
Sbjct: 1158 HGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALV 1217
Query: 963 AVRKNXXXXXXXXXXXXXNQISEYAKVVSESENNTLL-LLG----IKAPKALGDLVESIA 1017
AV+ N IS + VSE E ++L G I PK LGD++ES+A
Sbjct: 1218 AVKANLHKHILYASHHLHKHIS---RTVSEFEQSSLQSTFGWESDISFPKVLGDVIESLA 1274
Query: 1018 GAILIDTKLSLDEVWKFFNPLLSPIVTPDNLELIPSRKLSRLCDSLGYFMKIKEKYDNKE 1077
GAI +D+ + + V+ PLL ++TP+ ++L P R+L+ LC + + + +D+
Sbjct: 1275 GAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQKWQFELSKAKDFDS-- 1332
Query: 1078 STEHVELSVQLPNALLVQKGKGPNKRIAKEQAAFHLLNDLE 1118
+ V+ K +K++AK+ A +LN L+
Sbjct: 1333 ----FTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLK 1369
>AT1G01040.2 | Symbols: DCL1 | dicer-like 1 | chr1:23519-31079 FORWARD
LENGTH=1910
Length = 1910
Score = 328 bits (841), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 215/610 (35%), Positives = 313/610 (51%), Gaps = 37/610 (6%)
Query: 515 STNKIHFANCVLDLNDLREIVVLAIHTGKVYCIIEAVMDLSAESPFDGNNDKSAEPI--- 571
S K+ A+ + DL +V A H+GK + + D+SAE+ F + P+
Sbjct: 1196 SKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFP-RKEGYLGPLEYN 1254
Query: 572 TFSNYFLKRYGITLRHPGQPLLRLKQSHNSHNLLFNFHEKDVGGKSSQTGPGAS--KXXX 629
T+++Y+ ++YG+ L QPL++ + NLL E Q+G +
Sbjct: 1255 TYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFE--------QSGESETVLDKTY 1306
Query: 630 XXXXXXELLYIIDVKRDVLKSMYLLPSLMHRIETLLLSSQLREEINDXXXXXXXXXXXXX 689
EL + + +++ LPS+M R+E++LL+ QL+ I+
Sbjct: 1307 YVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLIS-----YPIPTSKIL 1361
Query: 690 XXXTTSRCCENFSMERLELLGDSVLKYVVSCHLFLKYPENHEGKLTARRQQVICNATLHK 749
T + C E F ER ELLGD+ LK+VVS LFLKYP+ HEG+LT RQQ++ N L++
Sbjct: 1362 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQ 1421
Query: 750 LGTNRKLQGYILDSAFEPRRWVAPGQHSIYPVPCDCGLETLEVPIDAKFRSEDPKVVVGK 809
+ LQ YI F P RW APG ++ G + E+ V
Sbjct: 1422 FALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDG 1481
Query: 810 SCDRG--------HRWMCSKTIGDCVESLIGGYFAGGGLIASLHFMKWLGIDAELEPSLV 861
+ G +R + SKT+ D VE+LIG Y+ GG IA+ H MKW+GI E +P V
Sbjct: 1482 EMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEV 1541
Query: 862 EKAITVASLHTYVPKSNEITSLENKLGYEFSTKGLLLEAITHLSEAELGNGCCYERLEFL 921
+ + ++ V KS + LE L YEF KGLL+EAITH S G CY+RLEF+
Sbjct: 1542 DGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGV-SCYQRLEFV 1600
Query: 922 GDSVLDVLITWHLYQSHTDIREGELTELRSASVNNENFAQVAVRKNXXXXXXXXXXXXXN 981
GD+VLD LIT HL+ ++T + G LT+LR+A+VNNENFA+VAV+
Sbjct: 1601 GDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEK 1660
Query: 982 QISEYAK-VVSESEN---NTLLLLGIKAPKALGDLVESIAGAILIDTKLSLDEVWKFFNP 1037
QI E+ K V +ES N+ L KAPK LGD+VESIAGAI +D+ WK F P
Sbjct: 1661 QIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQP 1720
Query: 1038 LLSPIVTPDNLELIPSRKLSRLCDSLGYFMKIKEKYDNKESTEHVELSVQLPNALLVQKG 1097
LL P+VTP+ L + P R+L C ++ K +T VE+ + + + V
Sbjct: 1721 LLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTAT--VEVFI---DGVQVGVA 1775
Query: 1098 KGPNKRIAKE 1107
+ P K++A++
Sbjct: 1776 QNPQKKMAQK 1785
Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 240/476 (50%), Gaps = 53/476 (11%)
Query: 12 AVDKGYISPKLHELIKIFHTFGESNEVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYL 71
AV G ++PK+ LIK+ + + + ++FVER++AA V+ + +P +S + + +
Sbjct: 639 AVADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASM 698
Query: 72 TGNHTSVDALAPTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSY 131
G H + + ++ ++ + FR G V LL T V EEG+++ C+ V+RFDL KTV +Y
Sbjct: 699 IG-HNNSQEMKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAY 757
Query: 132 VQSRGRSRQANSQFILMLERGNLKQRNQHFEIIR----TERFMTDAAINKVHESNLR--- 184
+QSRGR+R+ S +ILM+ERGN+ H +R +E + AI + S+L+
Sbjct: 758 IQSRGRARKPGSDYILMVERGNV----SHAAFLRNARNSEETLRKEAIERTDLSHLKDTS 813
Query: 185 ---AFTVGNTNAYVVDSTGASVSLHSSLSLINQYCEKLPRDKYSCVKPTFESLPMEGC-- 239
+ Y V++TGA VSL+S++ L++ YC +LP D+Y+ ++P F E
Sbjct: 814 RLISIDAVPGTVYKVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGG 873
Query: 240 ---YKCKLILPPNAAFQTIVGPSGKTARLAKNLVCLEACKKLHQMGALNDHLVPFTEEPS 296
Y C+L LP NA F+ + GP + RLA+ VCL ACKKLH+MGA D L+P
Sbjct: 874 HTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQ 933
Query: 297 EAHHIVKNKESSSGAGAGTTKRKELHGTASIRALCGAWGNKPE-----GANFNAYKFEFT 351
+A ++ E GT + +E + L G W + + F+ Y +
Sbjct: 934 DAEKADQDDEGE--PVPGTARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVR 991
Query: 352 C--------NIVSEIYSGFVLLIESKLDDDVG-NMELDLYLV-SKIVKASVSSCGKVDLD 401
C +SE+ S F +L ++LD +V +M +DLY+ + I KAS++ G +D+
Sbjct: 992 CVDFGSSKDPFLSEV-SEFAILFGNELDAEVVLSMSMDLYVARAMITKASLAFKGSLDIT 1050
Query: 402 AEQMMKAKCFHEFFFIGLFGRFVSMSTSSPGERVFLLQEDTRSLWSPTNLYFLLPL 457
Q+ K FH + V ST+ W P Y +P+
Sbjct: 1051 ENQLSSLKKFHVRLMSIVLDVDVEPSTTP---------------WDPAKAYLFVPV 1091
>AT1G01040.1 | Symbols: DCL1, CAF, SUS1, SIN1, ASU1, EMB76, EMB60,
ATDCL1 | dicer-like 1 | chr1:23519-31079 FORWARD
LENGTH=1909
Length = 1909
Score = 328 bits (841), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 215/610 (35%), Positives = 313/610 (51%), Gaps = 37/610 (6%)
Query: 515 STNKIHFANCVLDLNDLREIVVLAIHTGKVYCIIEAVMDLSAESPFDGNNDKSAEPI--- 571
S K+ A+ + DL +V A H+GK + + D+SAE+ F + P+
Sbjct: 1195 SKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFP-RKEGYLGPLEYN 1253
Query: 572 TFSNYFLKRYGITLRHPGQPLLRLKQSHNSHNLLFNFHEKDVGGKSSQTGPGAS--KXXX 629
T+++Y+ ++YG+ L QPL++ + NLL E Q+G +
Sbjct: 1254 TYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFE--------QSGESETVLDKTY 1305
Query: 630 XXXXXXELLYIIDVKRDVLKSMYLLPSLMHRIETLLLSSQLREEINDXXXXXXXXXXXXX 689
EL + + +++ LPS+M R+E++LL+ QL+ I+
Sbjct: 1306 YVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLIS-----YPIPTSKIL 1360
Query: 690 XXXTTSRCCENFSMERLELLGDSVLKYVVSCHLFLKYPENHEGKLTARRQQVICNATLHK 749
T + C E F ER ELLGD+ LK+VVS LFLKYP+ HEG+LT RQQ++ N L++
Sbjct: 1361 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQ 1420
Query: 750 LGTNRKLQGYILDSAFEPRRWVAPGQHSIYPVPCDCGLETLEVPIDAKFRSEDPKVVVGK 809
+ LQ YI F P RW APG ++ G + E+ V
Sbjct: 1421 FALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDG 1480
Query: 810 SCDRG--------HRWMCSKTIGDCVESLIGGYFAGGGLIASLHFMKWLGIDAELEPSLV 861
+ G +R + SKT+ D VE+LIG Y+ GG IA+ H MKW+GI E +P V
Sbjct: 1481 EMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEV 1540
Query: 862 EKAITVASLHTYVPKSNEITSLENKLGYEFSTKGLLLEAITHLSEAELGNGCCYERLEFL 921
+ + ++ V KS + LE L YEF KGLL+EAITH S G CY+RLEF+
Sbjct: 1541 DGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGV-SCYQRLEFV 1599
Query: 922 GDSVLDVLITWHLYQSHTDIREGELTELRSASVNNENFAQVAVRKNXXXXXXXXXXXXXN 981
GD+VLD LIT HL+ ++T + G LT+LR+A+VNNENFA+VAV+
Sbjct: 1600 GDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEK 1659
Query: 982 QISEYAK-VVSESEN---NTLLLLGIKAPKALGDLVESIAGAILIDTKLSLDEVWKFFNP 1037
QI E+ K V +ES N+ L KAPK LGD+VESIAGAI +D+ WK F P
Sbjct: 1660 QIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQP 1719
Query: 1038 LLSPIVTPDNLELIPSRKLSRLCDSLGYFMKIKEKYDNKESTEHVELSVQLPNALLVQKG 1097
LL P+VTP+ L + P R+L C ++ K +T VE+ + + + V
Sbjct: 1720 LLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTAT--VEVFI---DGVQVGVA 1774
Query: 1098 KGPNKRIAKE 1107
+ P K++A++
Sbjct: 1775 QNPQKKMAQK 1784
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/475 (31%), Positives = 240/475 (50%), Gaps = 52/475 (10%)
Query: 12 AVDKGYISPKLHELIKIFHTFGESNEVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYL 71
AV G ++PK+ LIK+ + + + ++FVER++AA V+ + +P +S + + +
Sbjct: 639 AVADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASM 698
Query: 72 TGNHTSVDALAPTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSY 131
G H + + ++ ++ + FR G V LL T V EEG+++ C+ V+RFDL KTV +Y
Sbjct: 699 IG-HNNSQEMKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAY 757
Query: 132 VQSRGRSRQANSQFILMLERGNLKQRNQHFEIIR----TERFMTDAAINKVHESNLR--- 184
+QSRGR+R+ S +ILM+ERGN+ H +R +E + AI + S+L+
Sbjct: 758 IQSRGRARKPGSDYILMVERGNV----SHAAFLRNARNSEETLRKEAIERTDLSHLKDTS 813
Query: 185 ---AFTVGNTNAYVVDSTGASVSLHSSLSLINQYCEKLPRDKYSCVKPTFESLPMEGC-- 239
+ Y V++TGA VSL+S++ L++ YC +LP D+Y+ ++P F E
Sbjct: 814 RLISIDAVPGTVYKVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGG 873
Query: 240 ---YKCKLILPPNAAFQTIVGPSGKTARLAKNLVCLEACKKLHQMGALNDHLVPFTEEPS 296
Y C+L LP NA F+ + GP + RLA+ VCL ACKKLH+MGA D L+P
Sbjct: 874 HTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQ 933
Query: 297 EAHHIVKNKESSSGAGAGTTKRKELHGTASIRALCGAWGNKPE-----GANFNAYKFEFT 351
+A ++ E GT + +E + L G W + + F+ Y +
Sbjct: 934 DAEKADQDDEGE--PVPGTARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVR 991
Query: 352 C--------NIVSEIYSGFVLLIESKLDDDVGNMELDLYLV-SKIVKASVSSCGKVDLDA 402
C +SE+ S F +L ++LD +V +M +DLY+ + I KAS++ G +D+
Sbjct: 992 CVDFGSSKDPFLSEV-SEFAILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDITE 1050
Query: 403 EQMMKAKCFHEFFFIGLFGRFVSMSTSSPGERVFLLQEDTRSLWSPTNLYFLLPL 457
Q+ K FH + V ST+ W P Y +P+
Sbjct: 1051 NQLSSLKKFHVRLMSIVLDVDVEPSTTP---------------WDPAKAYLFVPV 1090
>AT3G20420.1 | Symbols: RTL2, ATRTL2 | RNAse THREE-like protein 2 |
chr3:7119371-7120895 REVERSE LENGTH=391
Length = 391
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 133/250 (53%), Gaps = 14/250 (5%)
Query: 874 VPKSNEITSLE---NKLGYEFSTKGLLLEAITHLSEAELGNGCCYERLEFLGDSVLDVLI 930
VP S+E+ S+E L Y+FS K LL EAITH S + + YERLEF+GDS + + I
Sbjct: 51 VPVSSEMESMEAVEKILNYKFSNKSLLKEAITHTSCTDFPS---YERLEFIGDSAIGLAI 107
Query: 931 TWHLYQSHTDIREGELTELRSASVNNENFAQVAVRKNXXXXXXXXXXXXXNQISEYAKVV 990
+ +LY ++ + +L+ LR+A+V+ E A+V++ ++ E+++ V
Sbjct: 108 SNYLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAV 167
Query: 991 SESENNTLLLLG-IKAPKALGDLVESIAGAILIDTKLSLDEVWKFFNPLLSPIVTPDNLE 1049
+ ++ ++ G +KAPK L DL ES+AGA+ +D L +W F LL PIVT D+L+
Sbjct: 168 GKEDDLSVSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQ 227
Query: 1050 LIPS--RKLSRLCDSLGYFMKIKEKYDNKESTEHVELSVQLPNALLVQKGKGPNKRIAKE 1107
P L +LC + IK D +V ++V + L+ G+ NK IA+
Sbjct: 228 KQPQPVSMLFKLCHKHKKRIDIKNWKDG-----NVSIAVIYLDDELLASGRAENKDIARL 282
Query: 1108 QAAFHLLNDL 1117
AA L L
Sbjct: 283 IAAKEALRKL 292
>AT5G45150.1 | Symbols: RTL3 | RNAse THREE-like protein 3 |
chr5:18260441-18264346 FORWARD LENGTH=957
Length = 957
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 10/190 (5%)
Query: 878 NEITSLENKLGYEFSTKGLLLEAITHLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQS 937
N + ++E L Y F K LL EAIT S ++RLEF GDS+L+V T ++ +
Sbjct: 2 NSVEAVEKILNYSFVNKTLLKEAITQKSP-------LFDRLEFFGDSILEVAFTNYICHT 54
Query: 938 HTDIREGELTELRSASVNNENFAQVAVRKNXXXXXXXXXXXXXNQISEYAKVVSESENNT 997
+ +++ EL +LR+A+V+NE FA++AV N ++ +A+ V + ++
Sbjct: 55 YPNLKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPV 114
Query: 998 LLLLGIKAPKALGDLVESIAGAILIDTKLSLDEVWKFFNPLLSPIVTPDNLEL---IPSR 1054
+KAPK L D +ESIA + ID + +W+ F LL PI TPD+L L +P
Sbjct: 115 PYGGLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFL 174
Query: 1055 KLSRLCDSLG 1064
L RL D G
Sbjct: 175 TLFRLADKHG 184
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 880 ITSLENKLGYEFSTKGLLLEAITHLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQSHT 939
+ ++E L Y F K LL E +TH N ++ L F+G+S L + T HLY ++
Sbjct: 415 VEAVEKILNYSFVNKTLLKELLTH------NNSPLFQGLMFVGESALSLAFTKHLYLTYP 468
Query: 940 DIREGELTELRSASVNNENFAQVAVRKNXXXXXXXXXXXXXNQISEYAKVVSESENNTLL 999
+ +L+ LR A+ ++ +A VAV+K +++ +++ + ++ +
Sbjct: 469 MLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDDPYRV 528
Query: 1000 LLGIKAPKALGDLVESIAGAILIDTKLSLDEVWKFFNPLLSPIVTPDNLEL---IPSRKL 1056
+KAPK L +L+ +AGA+ ID K ++ + + F LL PI T D+L + P L
Sbjct: 529 ---VKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLML 585
Query: 1057 SRLCDSLG 1064
RL D G
Sbjct: 586 FRLADKHG 593
>AT4G15417.1 | Symbols: ATRTL1, RTL1 | RNAse II-like 1 |
chr4:8821759-8822991 FORWARD LENGTH=264
Length = 264
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 879 EITSLENKLGYEFSTKGLLLEAITHLSEAELGNGCCYERLEFLGDSVLDVLITWHLYQSH 938
EI SLE L Y+F K LLL+A T S + YE LE LGDS+L++ I + + +
Sbjct: 28 EIESLEKILNYKFKDKSLLLKAFTDASYVD-DKSESYELLELLGDSILNMGIIYDFIKLY 86
Query: 939 TDIREGELTELRSASVNNENFAQVAVRKNXXXXXXXXXXXXXNQISEYAKVVSES--ENN 996
G LT+LR+ +V+ E A+VAV QI E+ + + + +N
Sbjct: 87 PKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAMEKYPLHSN 146
Query: 997 TLLLLGIKAPKALGDLVESIAGAILIDTKLSLDEVWKFFNPLLSPIVTPDNLELIPSRKL 1056
LL K PK L D+VES GAI +D S + VWK PLL PI+ D ++ P +L
Sbjct: 147 GLL----KVPKVLADIVESTIGAIFMDCN-STETVWKVIKPLLEPIIHLDKMKSHPMTEL 201
Query: 1057 SRLCDSLGYFMKIKEKY-DNKESTEHVE 1083
+ +C + K+ + +N+ H+E
Sbjct: 202 NEMCQKRNLKLTSKDTWEENQTYCFHIE 229
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 37 EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGNHTSVDALAPTRQKE---ILDSF 93
E LC ++ I VI FV ++ LT + +HT Q I+ F
Sbjct: 262 ETLCDLYETLAITQSVI--FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 319
Query: 94 RSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSRGRS 138
RSG +L TTD+L GI+V S VI FDLP +Y+ GRS
Sbjct: 320 RSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 364
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 37 EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGNHTSVDALAPTRQKE---ILDSF 93
E LC ++ I VI FV ++ LT + +HT Q I+ F
Sbjct: 267 ETLCDLYETLAITQSVI--FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 324
Query: 94 RSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSRGRS 138
RSG +L TTD+L GI+V S VI FDLP +Y+ GRS
Sbjct: 325 RSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 369
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Query: 19 SPKLHELIKIFHTFGESN----EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGN 74
S K L+ + H E+ + L L+FVE A ++ ++ I+ + + G+
Sbjct: 396 SDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLC----INGFPATSIHGD 451
Query: 75 HTSVDALAPTRQKEI-LDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQ 133
T +++E+ L +F+SG+ +L TDV G+++P+ + V+ FDLP + YV
Sbjct: 452 RTQ-------QEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 504
Query: 134 SRGRSRQA 141
GR+ +A
Sbjct: 505 RIGRTGRA 512
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 19 SPKLHELIKIFHTFGESN--EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGNHT 76
S K L+ + H E+ + L L+FVE A ++ ++ ++ + + G+ T
Sbjct: 388 SDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLC----MNEFPATSIHGDRT 443
Query: 77 SVDALAPTRQKEI-LDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSR 135
+++E+ L SF++G+ +L TDV G+++P+ + V+ FDLP + YV
Sbjct: 444 Q-------QEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 496
Query: 136 GRSRQANSQFI 146
GR+ +A I
Sbjct: 497 GRTGRAGKSGI 507
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 19 SPKLHELIKIFHTFGESN--EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGNHT 76
S K L+ + H E+ + L L+FVE A ++ ++ ++ + + G+ T
Sbjct: 388 SDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLC----MNEFPATSIHGDRT 443
Query: 77 SVDALAPTRQKEI-LDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSR 135
+++E+ L SF++G+ +L TDV G+++P+ + V+ FDLP + YV
Sbjct: 444 Q-------QEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 496
Query: 136 GRSRQANSQFI 146
GR+ +A I
Sbjct: 497 GRTGRAGKSGI 507
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 19 SPKLHELIKIFHTFGESN--EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGNHT 76
S K L+ + H E+ + L L+FVE A ++ ++ ++ + + G+ T
Sbjct: 388 SDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLC----MNEFPATSIHGDRT 443
Query: 77 SVDALAPTRQKEI-LDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSR 135
+++E+ L SF++G+ +L TDV G+++P+ + V+ FDLP + YV
Sbjct: 444 Q-------QEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 496
Query: 136 GRSRQANSQFI 146
GR+ +A I
Sbjct: 497 GRTGRAGKSGI 507
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 37 EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGNHTSVDALAPTRQKE---ILDSF 93
E LC ++ I VI FV ++ LT + +HT Q I+ F
Sbjct: 269 ETLCDLYETLAITQSVI--FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 326
Query: 94 RSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSRGRS 138
RSG +L TTD+L GI+V S VI FDLP +Y+ GRS
Sbjct: 327 RSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 371
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 85 RQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSRGRSRQANSQ 144
+++ L++FR GK +L TDV G+++PN VI ++LP ++V GR+ +A +
Sbjct: 388 QRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 447
Query: 145 FILMLERGNLKQRNQ---------HFEII---------RTERFMTDAAINKVHESNLRAF 186
+L + ++R HFE I + A +N VH +++ F
Sbjct: 448 GSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFF 507
Query: 187 TVGNTNAY 194
+ Y
Sbjct: 508 SATAQKLY 515
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 85 RQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSRGRSRQANSQ 144
+++ L++FR GK +L TDV G+++PN VI ++LP ++V GR+ +A +
Sbjct: 388 QRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 447
Query: 145 FILMLERGNLKQRNQ---------HFEII---------RTERFMTDAAINKVHESNLRAF 186
+L + ++R HFE I + A +N VH +++ F
Sbjct: 448 GSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFF 507
Query: 187 TVGNTNAY 194
+ Y
Sbjct: 508 SATAQKLY 515
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 37 EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGNHTSVDALAPTRQKE---ILDSF 93
E LC ++ I VI FV ++ LT + +HT Q I+ F
Sbjct: 267 ETLCDLYETLAITQSVI--FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 324
Query: 94 RSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSRGRS 138
RSG +L TTD+L GI+V S VI FDLP +Y+ GRS
Sbjct: 325 RSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 369
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 37 EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGNHTSVDALAPTRQKE---ILDSF 93
E LC ++ I VI FV ++ LT + +HT Q I+ F
Sbjct: 262 ETLCDLYETLAITQSVI--FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 319
Query: 94 RSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSRGRS 138
RSG +L TTD+L GI+V S VI FDLP +Y+ GRS
Sbjct: 320 RSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 364
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 37 EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGNHTSVDALAPTRQKE---ILDSF 93
E LC ++ I VI FV ++ LT + +HT Q I+ F
Sbjct: 267 ETLCDLYETLAITQSVI--FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 324
Query: 94 RSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSRGRS 138
RSG +L TTD+L GI+V S VI FDLP +Y+ GRS
Sbjct: 325 RSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 369
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 37 EVLCLIFVERIIAAKVIQRFVKNVPQISHLTVSYLTGNHTSVDALAPTRQKE---ILDSF 93
E LC ++ I VI FV ++ LT + +HT Q I+ F
Sbjct: 257 ETLCDLYETLAITQSVI--FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 314
Query: 94 RSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSRGRS 138
RSG +L TTD+L GI+V S VI FDLP +Y+ GRS
Sbjct: 315 RSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 359
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 68 VSYLTGNHTSVDAL----APTRQKEILDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFD 123
VS N + +AL + +++ L++FR GK +L TDV G+++PN VI ++
Sbjct: 274 VSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYE 333
Query: 124 LPKTVRSYVQSRGRSRQANSQFILMLERGNLKQRNQ---------HFEII---------R 165
LP ++V GR+ +A + +L + ++R HFE I
Sbjct: 334 LPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLE 393
Query: 166 TERFMTDAAINKVHESNLRAFTVGNTNAY 194
+ A +N VH +++ F+ Y
Sbjct: 394 SSADQVVATLNGVHPDSIKFFSATAQKLY 422
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 90 LDSFRSGKVNLLFTTDVLEEGINVPNCSCVIRFDLPKTVRSYVQSRGRSRQA 141
L F+SGKV +L TDV G+++P VI +D+P+ R YV GR+ +A
Sbjct: 345 LSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARA 396